CmaCh04G018950 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G018950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Zinc finger-homeodomain protein 2
Location	Cma_Chr04 : 9889176 .. 9890063 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCACTACTCAAGATCATCCCATTCCCATTCCCATCCCTTTAAATAGTCGCTACGTTGGCCACGGCCACGACCACGACCATGTCATCCATCACCATGACCCGTCTGCCGCCTGCAACCATATCATCGCGGCGGCAGTCAATGGCGGCAGCCCACTTCCATCTTCTCAGATGGAAGTCGAGCTTCACCACAATCATAATAACAACAGCAACAACAATAACAACAACAACACGAAGAAGCAAGTAAAATATAAAGAGTGTCTCAAAAACCATGCGGCCTCCATGGGAGGTAATGCCACGGATGGGTGTGGCGAGTTCATGCCGAGTGGAGAAGAAGGATCCATTGAAGCCCTCACGTGTTCGGCTTGCAATTGTCATAGAAACTTCCATCGAAAAGAGATCGAGGGAGAACCCTACGACTGGCTCCACCATCCTCGCCTTGGGAGGAAGCTCCTCGTCGGAGGGAAGAACATGATCGCCCCACCAGAGGCAGCTGCATTTGCGTATCCATCGGCGGCGGGGCCGGCATTCATATCATCTAGAGCACAACCCCACCATATGATAATGTCGTACAACATGCTCGGCGGGGGAGGTGGGCAGTCAGAGTCAGAGGAGCACGAGGAGGCGAGGGCGTACTCGGGGCCAATGATGAACAAGAAGCGATTCCGAACAAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAGAAACAAGAGGAGAGTGTGGTGCAGCAATTCTGTGAAGAGATTGGAGTGAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAATAAGCACAATCTTGGGAAGAAGGATACCATTTCTCCTCCCCATTCTCCTACTCCCTTAACTTAA

mRNA sequence

ATGGAGCTCACTACTCAAGATCATCCCATTCCCATTCCCATCCCTTTAAATAGTCGCTACGTTGGCCACGGCCACGACCACGACCATGTCATCCATCACCATGACCCGTCTGCCGCCTGCAACCATATCATCGCGGCGGCAGTCAATGGCGGCAGCCCACTTCCATCTTCTCAGATGGAAGTCGAGCTTCACCACAATCATAATAACAACAGCAACAACAATAACAACAACAACACGAAGAAGCAAGTAAAATATAAAGAGTGTCTCAAAAACCATGCGGCCTCCATGGGAGGTAATGCCACGGATGGGTGTGGCGAGTTCATGCCGAGTGGAGAAGAAGGATCCATTGAAGCCCTCACGTGTTCGGCTTGCAATTGTCATAGAAACTTCCATCGAAAAGAGATCGAGGGAGAACCCTACGACTGGCTCCACCATCCTCGCCTTGGGAGGAAGCTCCTCGTCGGAGGGAAGAACATGATCGCCCCACCAGAGGCAGCTGCATTTGCGTATCCATCGGCGGCGGGGCCGGCATTCATATCATCTAGAGCACAACCCCACCATATGATAATGTCGTACAACATGCTCGGCGGGGGAGGTGGGCAGTCAGAGTCAGAGGAGCACGAGGAGGCGAGGGCGTACTCGGGGCCAATGATGAACAAGAAGCGATTCCGAACAAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAGAAACAAGAGGAGAGTGTGGTGCAGCAATTCTGTGAAGAGATTGGAGTGAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAATAAGCACAATCTTGGGAAGAAGGATACCATTTCTCCTCCCCATTCTCCTACTCCCTTAACTTAA

Coding sequence (CDS)

ATGGAGCTCACTACTCAAGATCATCCCATTCCCATTCCCATCCCTTTAAATAGTCGCTACGTTGGCCACGGCCACGACCACGACCATGTCATCCATCACCATGACCCGTCTGCCGCCTGCAACCATATCATCGCGGCGGCAGTCAATGGCGGCAGCCCACTTCCATCTTCTCAGATGGAAGTCGAGCTTCACCACAATCATAATAACAACAGCAACAACAATAACAACAACAACACGAAGAAGCAAGTAAAATATAAAGAGTGTCTCAAAAACCATGCGGCCTCCATGGGAGGTAATGCCACGGATGGGTGTGGCGAGTTCATGCCGAGTGGAGAAGAAGGATCCATTGAAGCCCTCACGTGTTCGGCTTGCAATTGTCATAGAAACTTCCATCGAAAAGAGATCGAGGGAGAACCCTACGACTGGCTCCACCATCCTCGCCTTGGGAGGAAGCTCCTCGTCGGAGGGAAGAACATGATCGCCCCACCAGAGGCAGCTGCATTTGCGTATCCATCGGCGGCGGGGCCGGCATTCATATCATCTAGAGCACAACCCCACCATATGATAATGTCGTACAACATGCTCGGCGGGGGAGGTGGGCAGTCAGAGTCAGAGGAGCACGAGGAGGCGAGGGCGTACTCGGGGCCAATGATGAACAAGAAGCGATTCCGAACAAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAGAAACAAGAGGAGAGTGTGGTGCAGCAATTCTGTGAAGAGATTGGAGTGAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAATAAGCACAATCTTGGGAAGAAGGATACCATTTCTCCTCCCCATTCTCCTACTCCCTTAACTTAA

Protein sequence

MELTTQDHPIPIPIPLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQMEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGPAFISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPPHSPTPLT

Homology

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BLAST of CmaCh04G018950 vs. Swiss-Prot
Match: ZHD4_ARATH (Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana GN=ZHD4 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-60
Identity = 153/315 (48.57%), Postives = 186/315 (59.05%), Query Frame = 1


Query: 1   MELTTQ-DHPIPIPIPLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           ME+ +Q DH +PIP  LN+ + G G  H H+IHHHD  AA N       N  +  P    
Sbjct: 1   MEIASQEDHDMPIP--LNTTF-GGGGSHGHMIHHHDHHAA-NSAPPTHNNNNTTQPPP-- 60

Query: 61  EVELHHN-HNNNSNNNNNNNT----------KKQVKYKECLKNHAASMGGNATDGCGEFM 120
            + LH N H NN +++++ +           K  +KYKECLKNHAA+MGGNATDGCGEFM
Sbjct: 61  -MPLHGNGHGNNYDHHHHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFM 120

Query: 121 PSGEEGSIEALTCSACNCHRNFHRKEIEGE-------PYDWLHHPRLGRKLLVGGKNMIA 180
           PSGE+GSIEALTCSACNCHRNFHRKE+EGE       PY   H     RKL++  + +  
Sbjct: 121 PSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAMSPY---HQHPPHRKLMLNHQKI-- 180

Query: 181 PPEAAAFAYPSAAGPAFISSRAQPHHMIM-----SYNMLGGGGGQSESEEHEEARAYSGP 240
                                A PH MIM     +Y  +       +  E +     S  
Sbjct: 181 -------------------RSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRS 240

Query: 241 MMN-----KKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVW 287
           + N     KKRFRTKFT EQKEKML FAEKVGWKIQ+QE+ VVQ+FCEEIGVKRRVLKVW
Sbjct: 241 LPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVW 284

[Close]

BLAST of CmaCh04G018950 vs. Swiss-Prot
Match: ZHD3_ARATH (Zinc-finger homeodomain protein 3 OS=Arabidopsis thaliana GN=ZHD3 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.0e-58
Identity = 144/297 (48.48%), Postives = 179/297 (60.27%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQME 60
           ME+ +Q+ PIPI    N+ Y   G  H ++ HHH  ++A + +     N   PL  S   
Sbjct: 1   MEIASQEDPIPI----NTSYGNSGGGHGNMNHHHHANSAPSSLNITTSN---PLLVSSNS 60

Query: 61  VELHHNHNNNSNNNNN-----NNTKKQ----VKYKECLKNHAASMGGNATDGCGEFMPSG 120
             L  NH+++ +++        N KK+    +KYKECLKNHAA+MGGNA DGCGEFMPSG
Sbjct: 61  NGLGKNHDHSHHHHVGYNIMVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSG 120

Query: 121 EEGSIEALTCSACNCHRNFHRKEIEGE------PYDWLHHPRLGRKLLVGGKNMIAPPEA 180
           EEGSIEALTCS CNCHRNFHR+E EGE      PY   H P   ++ L+    MI  P  
Sbjct: 121 EEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNHHQPPPQQRKLMFHHKMIKSPLP 180

Query: 181 AAFAYPSAAGPAFISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRT 240
                P     A  +S ++    +M      GGG  +  +       YS     KKRFRT
Sbjct: 181 QQMIMPIGVTTAGSNSESED---LMEEE---GGGSLTFRQPPPPPSPYSYGHNQKKRFRT 240

Query: 241 KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKK 283
           KFT EQKEKM+ FAE+VGWKIQ+QEESVVQQ C+EIG++RRVLKVWMHNNK NL KK
Sbjct: 241 KFTQEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIRRRVLKVWMHNNKQNLSKK 284

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BLAST of CmaCh04G018950 vs. Swiss-Prot
Match: ZHD4_ORYSJ (Zinc-finger homeodomain protein 4 OS=Oryza sativa subsp. japonica GN=ZHD4 PE=2 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-53
Identity = 123/241 (51.04%), Postives = 143/241 (59.34%), Query Frame = 1


Query: 83  VKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIE------ 142
           VKY+ECLKNHAA++GGNATDGCGEFMPSGEEGS+EAL CSAC CHRNFHRKE +      
Sbjct: 143 VKYRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKEADDLDADS 202

Query: 143 ---------GEPYDWL------HHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGPAFISS 202
                    G  +  L      HH + G  LLV G +      AAA A P    P     
Sbjct: 203 CAAALRAAAGRHHHLLGPALPHHHHKNGGGLLVAGGDPYGAAYAAARALPPPPPPP-PHG 262

Query: 203 RAQPHHMIMSYNML-----------GGGGGQSESEEHEEARAYSGPMMNKKRFRTKFTAE 262
               H +IM  NM+           GGGGG          R       +KKRFRTKFTAE
Sbjct: 263 HHHHHQIIMPLNMIHTSESDEMDVSGGGGGVG--------RGGGSSSSSKKRFRTKFTAE 322

Query: 263 QKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPPHS 292
           QK +ML FAE+VGW++QK ++++V  FC+EIGVKRRVLKVWMHNNKHNL KK   S P  
Sbjct: 323 QKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLKVWMHNNKHNLAKKPLPSSPPP 374

[Close]

BLAST of CmaCh04G018950 vs. Swiss-Prot
Match: ZHD3_ORYSJ (Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica GN=ZHD3 PE=3 SV=3)

HSP 1 Score: 189.5 bits (480), Expect = 5.2e-47
Identity = 126/315 (40.00%), Postives = 170/315 (53.97%), Query Frame = 1


Query: 1   MELTTQDHPIPIPI-PLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNG---GSPLPS 60
           M+L+     +P+P+    S Y+G  HDH H   HH             +NG     P P 
Sbjct: 1   MDLSGAQGELPLPMHAAASPYLGLHHDHHH---HHGGGGG-----GGGMNGRHMSPPTPP 60

Query: 61  SQMEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSI 120
           +  E        + +    +++     +Y+ECLKNHAA++GG+ATDGCGEFMP GEEGS+
Sbjct: 61  AAAE-------ESKAVVVVSSSATAAARYRECLKNHAAAIGGSATDGCGEFMPGGEEGSL 120

Query: 121 EALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGP 180
           +AL CSAC CHRNFHRKE++      LHH     +LL  G            A+P   G 
Sbjct: 121 DALRCSACGCHRNFHRKELDAAAAPPLHHHH--HQLLGVG------------AHPRGHGH 180

Query: 181 ----AFISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRTKFTAEQK 240
                 +++   P  M+M  + +        SE  + A    G    +KRFRTKFTAEQK
Sbjct: 181 HHHHLLVAALPPPTRMVMPLSAM------HTSESDDAAARPGGGAAARKRFRTKFTAEQK 240

Query: 241 EKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKK---------- 294
            +ML FAE+VGW++QK E++VVQ+FC+E+GVKRRVLKVWMHNNKH L ++          
Sbjct: 241 ARMLGFAEEVGWRLQKLEDAVVQRFCQEVGVKRRVLKVWMHNNKHTLARRHLHPSPAAAA 280

[Close]

BLAST of CmaCh04G018950 vs. Swiss-Prot
Match: ZHD5_ARATH (Zinc-finger homeodomain protein 5 OS=Arabidopsis thaliana GN=ZHD5 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.5e-43
Identity = 112/254 (44.09%), Postives = 143/254 (56.30%), Query Frame = 1


Query: 64  HHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSA 123
           HH   + S+ + +   K  V+Y+ECLKNHAAS+GG+  DGCGEFMPSGEEG+IEAL C+A
Sbjct: 55  HHQSKSPSSFSISAAAKPTVRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAA 114

Query: 124 CNCHRNFHRKEIEG---------EPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAA 183
           C+CHRNFHRKE++G           +   HH + G     GG     PP           
Sbjct: 115 CDCHRNFHRKEMDGVGSSDLISHHRHHHYHHNQYGG----GGGRRPPPPNMMLNPLMLPP 174

Query: 184 GPAFISSRAQPHHMI----------MSYNMLGGGGGQSESEEH---------EEARAYSG 243
            P +       + M           MS    GGGGG   S E          E A A +G
Sbjct: 175 PPNYQPIHHHKYGMSPPGGGGMVTPMSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAG 234

Query: 244 PM-----MNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKV 285
            M      +KKRFRTKFT +QKE+M+ FAEK+GW++ KQ+E  +++FC EIGVKR+V KV
Sbjct: 235 QMAFSMSSSKKRFRTKFTTDQKERMMDFAEKLGWRMNKQDEEELKRFCGEIGVKRQVFKV 294

[Close]

BLAST of CmaCh04G018950 vs. TrEMBL
Match: A0A0A0KSI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527900 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 6.9e-131
Identity = 245/307 (79.80%), Postives = 255/307 (83.06%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIP--LNSRYVGH----GHDHDHVIHHHDPSAACNHIIAAAVNGGSPL 60
           MELTT D PIPIPIP  LNSRY GH     HDHDH+IHHHD S+  NHII+A VNGG+  
Sbjct: 1   MELTTHDPPIPIPIPIPLNSRYAGHDHDHNHDHDHIIHHHDSSSTRNHIISATVNGGN-- 60

Query: 61  PSSQMEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEG 120
              QMEV+LHH+       NNNNN KK +KYKECLKNHAASMGGNATDGCGEFMPSGEEG
Sbjct: 61  ---QMEVDLHHH------TNNNNNNKKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEG 120

Query: 121 SIEALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAA 180
           SIEALTC ACNCHRNFHRKEIEGEPYDWLHH RLGRKLLVGGKNMI PPE AAFAYP+A 
Sbjct: 121 SIEALTCLACNCHRNFHRKEIEGEPYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAG 180

Query: 181 GPAFISSRA---QPHHMIMSYNMLGGGGGQSESEEHEE-------ARAYSGPMMNKKRFR 240
           G  FISSRA   QPHHMIMSYNMLGGGGG SESEE EE        R YSG MMNKKRFR
Sbjct: 181 GATFISSRAATTQPHHMIMSYNMLGGGGGHSESEEQEEGMGAGVGGRVYSGAMMNKKRFR 240

Query: 241 TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDT 292
           TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMHNNKHNL KKDT
Sbjct: 241 TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDT 296

[Close]

BLAST of CmaCh04G018950 vs. TrEMBL
Match: A0A067DTZ0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048741mg PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.1e-79
Identity = 182/319 (57.05%), Postives = 207/319 (64.89%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHD-HVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           MEL++QD  IPIPI  NS Y G GH H  H  HHH   A  ++II  A +     P +  
Sbjct: 1   MELSSQDGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPHDNIIPVASSAPQISPINGP 60

Query: 61  EVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120
            + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEAL
Sbjct: 61  PIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEAL 120

Query: 121 TCSACNCHRNFHRKEIEGE--------PYDWLHH------PRLGRKLLVGGKNMIAPPEA 180
           TCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I     
Sbjct: 121 TCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATP 180

Query: 181 AAFAYPSAAGPAFISSR-----AQPHHMIMSYNMLGGGGGQSESEEHEEA-------RAY 240
            A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+         A 
Sbjct: 181 EALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVMAAR 240

Query: 241 SGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMH 293
               + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMH
Sbjct: 241 PTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMH 300

[Close]

BLAST of CmaCh04G018950 vs. TrEMBL
Match: V4SV99_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003702mg PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.6e-79
Identity = 181/315 (57.46%), Postives = 205/315 (65.08%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHD-HVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           MEL++QD  IPIPI  NS Y G GH H  H  HHH   A  ++II  A +     P +  
Sbjct: 1   MELSSQDGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPHDNIIPVASSAPQISPINGP 60

Query: 61  EVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120
            + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEAL
Sbjct: 61  PIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEAL 120

Query: 121 TCSACNCHRNFHRKEIEGE--------PYDWLHH------PRLGRKLLVGGKNMIAPPEA 180
           TCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I     
Sbjct: 121 TCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATP 180

Query: 181 AAFAYPSAAGPAFISSR-----AQPHHMIMSYNMLGGGGGQSESEEHEEA-------RAY 240
            A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+         A 
Sbjct: 181 EALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVMAAR 240

Query: 241 SGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMH 289
               + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMH
Sbjct: 241 PTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMH 300

[Close]

BLAST of CmaCh04G018950 vs. TrEMBL
Match: B9SIQ1_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0825030 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 5.8e-77
Identity = 184/319 (57.68%), Postives = 216/319 (67.71%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGH------GHDHDHVIHH-HDPSAACNHIIAAAV----- 60
           MEL++  H + IPIPLNS Y G       GH H H+IHH H  S   NHII ++      
Sbjct: 1   MELSS--HEVEIPIPLNSTYGGGHGHAHGGHGHGHMIHHDHHNSTPHNHIIPSSAPQLTS 60

Query: 61  -NGGSPLPSSQMEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEF 120
            NG S LP++ ++    H+H  ++ +      KK VKYKECLKNHAA+MGGNATDGCGEF
Sbjct: 61  NNGPSSLPNTGLD---DHHHVTSTTST----FKKMVKYKECLKNHAAAMGGNATDGCGEF 120

Query: 121 MPSGEEGSIEALTCSACNCHRNFHRKEIEGE--PYDWL--HHPRLGRKLLVGGKNMIAPP 180
           MPSGEEGSIEALTCSACNCHRNFHRKEI+GE  P D+   H  R+GRK+++G    I  P
Sbjct: 121 MPSGEEGSIEALTCSACNCHRNFHRKEIDGETNPCDYYPPHFNRVGRKVILGHHKNILAP 180

Query: 181 EAAAFAYPSAAGPAFISSRAQ--PHH-MIMSYNMLGGGGGQSESEEHEEARAY---SGPM 240
           EA    YP+  G   + SRA   PHH MIMSYNM  GG   SES+E E+           
Sbjct: 181 EA--LGYPTGTG-TLVPSRATVAPHHQMIMSYNM--GGSLPSESDEQEDGGGVVMARPQQ 240

Query: 241 MNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKH 296
           + KKR+RTKF+ EQKEKML FAEKVGWKIQKQEE+VVQQFC+EIGVKRRVLKVWMHNNKH
Sbjct: 241 LVKKRYRTKFSQEQKEKMLNFAEKVGWKIQKQEEAVVQQFCQEIGVKRRVLKVWMHNNKH 300

[Close]

BLAST of CmaCh04G018950 vs. TrEMBL
Match: U5GNK9_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s23860g PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.4e-75
Identity = 171/299 (57.19%), Postives = 199/299 (66.56%), Query Frame = 1


Query: 2   ELTTQDHPIPIPIPLNSRYVG-HGHDHDHVIHHHDPSAACNH--IIAAAVNGGSPLPSSQ 61
           E+    H   IPIPLNS + G HGH H H+IHH  P+   NH  II++       +PSS 
Sbjct: 16  EMELSSHEAGIPIPLNSTFGGAHGHGHGHLIHHDHPAVPHNHNNIISSTA---PQIPSSN 75

Query: 62  MEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEA 121
               +       S ++N+   KK V+Y+ECLKNHAASMGGNATDGCGEFMPSGEEGSIEA
Sbjct: 76  NGTSI----TTASIDDNHVPYKKMVRYRECLKNHAASMGGNATDGCGEFMPSGEEGSIEA 135

Query: 122 LTCSACNCHRNFHRKEIEGEPYDW----------LHHPRLGRKLLVGGKNMIAPPEAAAF 181
           LTCSACNCHRNFHRKEIEGE              +H  RLGRK+++G    I  PEA   
Sbjct: 136 LTCSACNCHRNFHRKEIEGEHTSCTGDHCYHNSPVHFNRLGRKVILGHHKSILAPEA--L 195

Query: 182 AYPSAAGPAFISSRAQPHH-MIMSYNMLGGGGGQSESEEHEEARAY---SGPMMNKKRFR 241
            YP+A G    S  + PHH MIMSYNM   G   SES+E E+           + KKRFR
Sbjct: 196 GYPTATGTLIPSRASAPHHQMIMSYNM---GSLPSESDEQEDGGGVLMARPAQLMKKRFR 255

Query: 242 TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKD 284
           TKF+ EQKEKML FAEKVGWK+QKQEE+VVQQFC+EIGVKRRVLKVWMHNNKH+L KK+
Sbjct: 256 TKFSQEQKEKMLNFAEKVGWKLQKQEETVVQQFCQEIGVKRRVLKVWMHNNKHSLAKKN 302

[Close]

BLAST of CmaCh04G018950 vs. TAIR10
Match: AT1G14440.1 (AT1G14440.1 homeobox protein 31)

HSP 1 Score: 234.2 bits (596), Expect = 1.0e-61
Identity = 153/315 (48.57%), Postives = 186/315 (59.05%), Query Frame = 1


Query: 1   MELTTQ-DHPIPIPIPLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           ME+ +Q DH +PIP  LN+ + G G  H H+IHHHD  AA N       N  +  P    
Sbjct: 1   MEIASQEDHDMPIP--LNTTF-GGGGSHGHMIHHHDHHAA-NSAPPTHNNNNTTQPPP-- 60

Query: 61  EVELHHN-HNNNSNNNNNNNT----------KKQVKYKECLKNHAASMGGNATDGCGEFM 120
            + LH N H NN +++++ +           K  +KYKECLKNHAA+MGGNATDGCGEFM
Sbjct: 61  -MPLHGNGHGNNYDHHHHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFM 120

Query: 121 PSGEEGSIEALTCSACNCHRNFHRKEIEGE-------PYDWLHHPRLGRKLLVGGKNMIA 180
           PSGE+GSIEALTCSACNCHRNFHRKE+EGE       PY   H     RKL++  + +  
Sbjct: 121 PSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAMSPY---HQHPPHRKLMLNHQKI-- 180

Query: 181 PPEAAAFAYPSAAGPAFISSRAQPHHMIM-----SYNMLGGGGGQSESEEHEEARAYSGP 240
                                A PH MIM     +Y  +       +  E +     S  
Sbjct: 181 -------------------RSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRS 240

Query: 241 MMN-----KKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVW 287
           + N     KKRFRTKFT EQKEKML FAEKVGWKIQ+QE+ VVQ+FCEEIGVKRRVLKVW
Sbjct: 241 LPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVW 284

[Close]

BLAST of CmaCh04G018950 vs. TAIR10
Match: AT2G02540.1 (AT2G02540.1 homeobox protein 21)

HSP 1 Score: 228.4 bits (581), Expect = 5.7e-60
Identity = 144/297 (48.48%), Postives = 179/297 (60.27%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQME 60
           ME+ +Q+ PIPI    N+ Y   G  H ++ HHH  ++A + +     N   PL  S   
Sbjct: 1   MEIASQEDPIPI----NTSYGNSGGGHGNMNHHHHANSAPSSLNITTSN---PLLVSSNS 60

Query: 61  VELHHNHNNNSNNNNN-----NNTKKQ----VKYKECLKNHAASMGGNATDGCGEFMPSG 120
             L  NH+++ +++        N KK+    +KYKECLKNHAA+MGGNA DGCGEFMPSG
Sbjct: 61  NGLGKNHDHSHHHHVGYNIMVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSG 120

Query: 121 EEGSIEALTCSACNCHRNFHRKEIEGE------PYDWLHHPRLGRKLLVGGKNMIAPPEA 180
           EEGSIEALTCS CNCHRNFHR+E EGE      PY   H P   ++ L+    MI  P  
Sbjct: 121 EEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNHHQPPPQQRKLMFHHKMIKSPLP 180

Query: 181 AAFAYPSAAGPAFISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRT 240
                P     A  +S ++    +M      GGG  +  +       YS     KKRFRT
Sbjct: 181 QQMIMPIGVTTAGSNSESED---LMEEE---GGGSLTFRQPPPPPSPYSYGHNQKKRFRT 240

Query: 241 KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKK 283
           KFT EQKEKM+ FAE+VGWKIQ+QEESVVQQ C+EIG++RRVLKVWMHNNK NL KK
Sbjct: 241 KFTQEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIRRRVLKVWMHNNKQNLSKK 284

[Close]

BLAST of CmaCh04G018950 vs. TAIR10
Match: AT1G75240.1 (AT1G75240.1 homeobox protein 33)

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-44
Identity = 112/254 (44.09%), Postives = 143/254 (56.30%), Query Frame = 1


Query: 64  HHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSA 123
           HH   + S+ + +   K  V+Y+ECLKNHAAS+GG+  DGCGEFMPSGEEG+IEAL C+A
Sbjct: 55  HHQSKSPSSFSISAAAKPTVRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAA 114

Query: 124 CNCHRNFHRKEIEG---------EPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAA 183
           C+CHRNFHRKE++G           +   HH + G     GG     PP           
Sbjct: 115 CDCHRNFHRKEMDGVGSSDLISHHRHHHYHHNQYGG----GGGRRPPPPNMMLNPLMLPP 174

Query: 184 GPAFISSRAQPHHMI----------MSYNMLGGGGGQSESEEH---------EEARAYSG 243
            P +       + M           MS    GGGGG   S E          E A A +G
Sbjct: 175 PPNYQPIHHHKYGMSPPGGGGMVTPMSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAG 234

Query: 244 PM-----MNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKV 285
            M      +KKRFRTKFT +QKE+M+ FAEK+GW++ KQ+E  +++FC EIGVKR+V KV
Sbjct: 235 QMAFSMSSSKKRFRTKFTTDQKERMMDFAEKLGWRMNKQDEEELKRFCGEIGVKRQVFKV 294

[Close]

BLAST of CmaCh04G018950 vs. TAIR10
Match: AT4G24660.1 (AT4G24660.1 homeobox protein 22)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-42
Identity = 93/202 (46.04%), Postives = 124/202 (61.39%), Query Frame = 1


Query: 82  QVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYD 141
           +++Y+ECLKNHA ++GG+A DGC EFMPSGE+G+++AL C+AC CHRNFHRKE E     
Sbjct: 46  KIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES---- 105

Query: 142 WLHHPRLGRKLLVGGKNMIAPPEAAAFAYP-SAAGPAFISSRAQPHHMIMSYNMLGGGGG 201
                       +GG+    P        P    G   ++S A P+              
Sbjct: 106 ------------IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYR------------P 165

Query: 202 QSESEEHEEARAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEE 261
            + S + E+    S      KRFRTKFTAEQKEKML FAE++GW+IQK ++  V+QFC E
Sbjct: 166 PAASGDEEDTSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAE 219

Query: 262 IGVKRRVLKVWMHNNKHNLGKK 283
            GV+R+VLK+WMHNNK++LGKK
Sbjct: 226 TGVRRQVLKIWMHNNKNSLGKK 219

[Close]

BLAST of CmaCh04G018950 vs. TAIR10
Match: AT5G65410.1 (AT5G65410.1 homeobox protein 25)

HSP 1 Score: 169.9 bits (429), Expect = 2.4e-42
Identity = 94/211 (44.55%), Postives = 129/211 (61.14%), Query Frame = 1


Query: 84  KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYDWL 143
           +++ECLKN A ++GG+A DGCGEFMP+G EG+I+AL C+AC CHRNFHRKE+   PY   
Sbjct: 74  RFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKEL---PY--F 133

Query: 144 HHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGPAFISSRAQPHHMIMSYNMLGGGGGQSE 203
           HH           ++   PP    +  P+        S+A P  + +          +  
Sbjct: 134 HH--------APPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQ------RER 193

Query: 204 SEEHEEARAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGV 263
           SE+  E  +       +KR RTKFTAEQKE+ML  AE++GW+IQ+Q++ V+Q+FC+E GV
Sbjct: 194 SEDPMETSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETGV 253

Query: 264 KRRVLKVWMHNNKHNLGKKDTISPPHSPTPL 295
            R+VLKVW+HNNKH LGK        SP+PL
Sbjct: 254 PRQVLKVWLHNNKHTLGK--------SPSPL 257

[Close]

BLAST of CmaCh04G018950 vs. NCBI nr
Match: gi|659121291|ref|XP_008460585.1| (PREDICTED: zinc-finger homeodomain protein 4 [Cucumis melo])

HSP 1 Score: 483.4 bits (1243), Expect = 2.8e-133
Identity = 245/303 (80.86%), Postives = 257/303 (84.82%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIP--LNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQ 60
           MELTT D PIPIPIP  LNSRY GH HDHDH+IHHHDPS+  NHII+A VNG +    +Q
Sbjct: 1   MELTTHDPPIPIPIPIPLNSRYAGHNHDHDHIIHHHDPSSTRNHIISATVNGSN----NQ 60

Query: 61  MEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEA 120
           MEV+LHH+      NNNNNN KK +KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEA
Sbjct: 61  MEVDLHHH------NNNNNNNKKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEA 120

Query: 121 LTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGPAF 180
           LTCSACNCHRNFHRKEIEGEPYDWLHH RLGRKLLVGGKNMI PPE AAFAYP+A G  F
Sbjct: 121 LTCSACNCHRNFHRKEIEGEPYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATF 180

Query: 181 ISSRA---QPHHMIMSYNMLGGGGGQSESEEHEE-------ARAYSGPMMNKKRFRTKFT 240
           ISSRA   QPHHMIMSYNMLGGGGG SESEE EE        R YSG MMNKKRFRTKFT
Sbjct: 181 ISSRAATTQPHHMIMSYNMLGGGGGHSESEEQEEGIGAGVGGRVYSGAMMNKKRFRTKFT 240

Query: 241 AEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPP 292
            EQKEKMLRFAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMHNNKHNL KK+T+SP 
Sbjct: 241 TEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKETMSPS 293

[Close]

BLAST of CmaCh04G018950 vs. NCBI nr
Match: gi|449450205|ref|XP_004142854.1| (PREDICTED: zinc-finger homeodomain protein 4 [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 9.9e-131
Identity = 245/307 (79.80%), Postives = 255/307 (83.06%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIP--LNSRYVGH----GHDHDHVIHHHDPSAACNHIIAAAVNGGSPL 60
           MELTT D PIPIPIP  LNSRY GH     HDHDH+IHHHD S+  NHII+A VNGG+  
Sbjct: 1   MELTTHDPPIPIPIPIPLNSRYAGHDHDHNHDHDHIIHHHDSSSTRNHIISATVNGGN-- 60

Query: 61  PSSQMEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEG 120
              QMEV+LHH+       NNNNN KK +KYKECLKNHAASMGGNATDGCGEFMPSGEEG
Sbjct: 61  ---QMEVDLHHH------TNNNNNNKKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEG 120

Query: 121 SIEALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAA 180
           SIEALTC ACNCHRNFHRKEIEGEPYDWLHH RLGRKLLVGGKNMI PPE AAFAYP+A 
Sbjct: 121 SIEALTCLACNCHRNFHRKEIEGEPYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAG 180

Query: 181 GPAFISSRA---QPHHMIMSYNMLGGGGGQSESEEHEE-------ARAYSGPMMNKKRFR 240
           G  FISSRA   QPHHMIMSYNMLGGGGG SESEE EE        R YSG MMNKKRFR
Sbjct: 181 GATFISSRAATTQPHHMIMSYNMLGGGGGHSESEEQEEGMGAGVGGRVYSGAMMNKKRFR 240

Query: 241 TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDT 292
           TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMHNNKHNL KKDT
Sbjct: 241 TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDT 296

[Close]

BLAST of CmaCh04G018950 vs. NCBI nr
Match: gi|641822556|gb|KDO42061.1| (hypothetical protein CISIN_1g048741mg [Citrus sinensis])

HSP 1 Score: 303.9 bits (777), Expect = 3.0e-79
Identity = 182/319 (57.05%), Postives = 207/319 (64.89%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHD-HVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           MEL++QD  IPIPI  NS Y G GH H  H  HHH   A  ++II  A +     P +  
Sbjct: 1   MELSSQDGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPHDNIIPVASSAPQISPINGP 60

Query: 61  EVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120
            + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEAL
Sbjct: 61  PIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEAL 120

Query: 121 TCSACNCHRNFHRKEIEGE--------PYDWLHH------PRLGRKLLVGGKNMIAPPEA 180
           TCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I     
Sbjct: 121 TCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATP 180

Query: 181 AAFAYPSAAGPAFISSR-----AQPHHMIMSYNMLGGGGGQSESEEHEEA-------RAY 240
            A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+         A 
Sbjct: 181 EALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVMAAR 240

Query: 241 SGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMH 293
               + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMH
Sbjct: 241 PTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMH 300

[Close]

BLAST of CmaCh04G018950 vs. NCBI nr
Match: gi|567877747|ref|XP_006431432.1| (hypothetical protein CICLE_v10003702mg [Citrus clementina])

HSP 1 Score: 303.1 bits (775), Expect = 5.2e-79
Identity = 181/315 (57.46%), Postives = 205/315 (65.08%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHD-HVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           MEL++QD  IPIPI  NS Y G GH H  H  HHH   A  ++II  A +     P +  
Sbjct: 1   MELSSQDGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPHDNIIPVASSAPQISPINGP 60

Query: 61  EVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120
            + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEAL
Sbjct: 61  PIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEAL 120

Query: 121 TCSACNCHRNFHRKEIEGE--------PYDWLHH------PRLGRKLLVGGKNMIAPPEA 180
           TCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I     
Sbjct: 121 TCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATP 180

Query: 181 AAFAYPSAAGPAFISSR-----AQPHHMIMSYNMLGGGGGQSESEEHEEA-------RAY 240
            A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+         A 
Sbjct: 181 EALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVMAAR 240

Query: 241 SGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMH 289
               + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMH
Sbjct: 241 PTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMH 300

[Close]

BLAST of CmaCh04G018950 vs. NCBI nr
Match: gi|568833299|ref|XP_006470838.1| (PREDICTED: zinc-finger homeodomain protein 4 [Citrus sinensis])

HSP 1 Score: 302.4 bits (773), Expect = 8.8e-79
Identity = 181/319 (56.74%), Postives = 207/319 (64.89%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHD-HVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           MEL++Q+  IPIPI  NS Y G GH H  H  HHH   A  ++II  A +     P +  
Sbjct: 1   MELSSQEGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPHDNIIPVASSAPQISPINGP 60

Query: 61  EVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120
            + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEAL
Sbjct: 61  PIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEAL 120

Query: 121 TCSACNCHRNFHRKEIEGE--------PYDWLHH------PRLGRKLLVGGKNMIAPPEA 180
           TCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I     
Sbjct: 121 TCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATP 180

Query: 181 AAFAYPSAAGPAFISSR-----AQPHHMIMSYNMLGGGGGQSESEEHEEA-------RAY 240
            A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+         A 
Sbjct: 181 EALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVMAAR 240

Query: 241 SGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMH 293
               + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMH
Sbjct: 241 PTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMH 300

The following BLAST results are available for this feature:

BLAST of CmaCh04G018950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZHD4_ARATH	1.9e-60	48.57	Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana GN=ZHD4 PE=1 SV=1	[more]
ZHD3_ARATH	1.0e-58	48.48	Zinc-finger homeodomain protein 3 OS=Arabidopsis thaliana GN=ZHD3 PE=1 SV=1	[more]
ZHD4_ORYSJ	1.3e-53	51.04	Zinc-finger homeodomain protein 4 OS=Oryza sativa subsp. japonica GN=ZHD4 PE=2 S...	[more]
ZHD3_ORYSJ	5.2e-47	40.00	Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica GN=ZHD3 PE=3 S...	[more]
ZHD5_ARATH	3.5e-43	44.09	Zinc-finger homeodomain protein 5 OS=Arabidopsis thaliana GN=ZHD5 PE=1 SV=1	[more]

BLAST of CmaCh04G018950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSI7_CUCSA	6.9e-131	79.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527900 PE=4 SV=1	[more]
A0A067DTZ0_CITSI	2.1e-79	57.05	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048741mg PE=4 SV=1	[more]
V4SV99_9ROSI	3.6e-79	57.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003702mg PE=4 SV=1	[more]
B9SIQ1_RICCO	5.8e-77	57.68	Transcription factor, putative OS=Ricinus communis GN=RCOM_0825030 PE=4 SV=1	[more]
U5GNK9_POPTR	2.4e-75	57.19	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s23860g P...	[more]

BLAST of CmaCh04G018950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14440.1	1.0e-61	48.57	homeobox protein 31	[more]
AT2G02540.1	5.7e-60	48.48	homeobox protein 21	[more]
AT1G75240.1	2.0e-44	44.09	homeobox protein 33	[more]
AT4G24660.1	1.1e-42	46.04	homeobox protein 22	[more]
AT5G65410.1	2.4e-42	44.55	homeobox protein 25	[more]

BLAST of CmaCh04G018950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121291\|ref\|XP_008460585.1\|	2.8e-133	80.86	PREDICTED: zinc-finger homeodomain protein 4 [Cucumis melo]	[more]
gi\|449450205\|ref\|XP_004142854.1\|	9.9e-131	79.80	PREDICTED: zinc-finger homeodomain protein 4 [Cucumis sativus]	[more]
gi\|641822556\|gb\|KDO42061.1\|	3.0e-79	57.05	hypothetical protein CISIN_1g048741mg [Citrus sinensis]	[more]
gi\|567877747\|ref\|XP_006431432.1\|	5.2e-79	57.46	hypothetical protein CICLE_v10003702mg [Citrus clementina]	[more]
gi\|568833299\|ref\|XP_006470838.1\|	8.8e-79	56.74	PREDICTED: zinc-finger homeodomain protein 4 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006455	Homeodomain_ZF_HD
IPR006456	ZF_HD_homeobox_Cys/His_dimer
IPR009057	Homeobox-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G018950.1	CmaCh04G018950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006455	Homeodomain, ZF-HD class	TIGRFAMs	TIGR01565	TIGR01565	coord: 220..276 score: 6.5
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PRODOM	PD125774		coord: 83..138 score: 2.0
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 82..135 score: 1.5
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAMs	TIGR01566	TIGR01566	coord: 84..135 score: 6.6
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROFILE	PS51523	ZF_HD_DIMER	coord: 85..134 score: 27
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 209..282 score: 6.9
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 212..281 score: 6.01
None	No IPR available	PANTHER	PTHR31948	FAMILY NOT NAMED	coord: 71..294 score: 4.4E
None	No IPR available	PANTHER	PTHR31948:SF19	ZINC-FINGER HOMEODOMAIN PROTEIN 3-RELATED	coord: 71..294 score: 4.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G018950	Cucsa.011620	Cucumber (Gy14) v1	cgycmaB0545
CmaCh04G018950	Cla001881	Watermelon (97103) v1	cmawmB739
CmaCh04G018950	Csa5G527900	Cucumber (Chinese Long) v2	cmacuB759
CmaCh04G018950	MELO3C022921	Melon (DHL92) v3.5.1	cmameB646
CmaCh04G018950	ClCG11G000100	Watermelon (Charleston Gray)	cmawcgB622
CmaCh04G018950	CSPI05G18630	Wild cucumber (PI 183967)	cmacpiB766
CmaCh04G018950	CmoCh04G019970	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G018950	Lsi11G001010	Bottle gourd (USVL1VR-Ls)	cmalsiB635
CmaCh04G018950	Cp4.1LG01g17110	Cucurbita pepo (Zucchini)	cmacpeB725
CmaCh04G018950	MELO3C022921.2	Melon (DHL92) v3.6.1	cmamedB730
CmaCh04G018950	CsaV3_5G027460	Cucumber (Chinese Long) v3	cmacucB0898
CmaCh04G018950	Cla97C11G206460	Watermelon (97103) v2	cmawmbB726
CmaCh04G018950	BhiUN159G31	Wax gourd	cmawgoB0876
CmaCh04G018950	CsGy5G018220	Cucumber (Gy14) v2	cgybcmaB688
CmaCh04G018950	Carg26173	Silver-seed gourd	carcmaB0395

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G018950	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G018950	Cucumber (Gy14) v2	cgybcmaB691
CmaCh04G018950	Cucumber (Chinese Long) v3	cmacucB0903
CmaCh04G018950	Watermelon (97103) v2	cmawmbB734
CmaCh04G018950	Wax gourd	cmawgoB0913
CmaCh04G018950	Wax gourd	cmawgoB0904
CmaCh04G018950	Wild cucumber (PI 183967)	cmacpiB767
CmaCh04G018950	Cucumber (Chinese Long) v2	cmacuB760
CmaCh04G018950	Watermelon (Charleston Gray)	cmawcgB628
CmaCh04G018950	Watermelon (97103) v1	cmawmB745