Cp4.1LG01g17110 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g17110
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger-homeodomain protein 1
LocationCp4.1LG01 : 11426926 .. 11427810 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTCACTACTCAAGATCATCCCATTCCCATCCCCATCCCTTTAAATAGTCGCTACGGTGGCCACGACCTCGACCACGACCATGTCATCCATCACCATGACCCGTCCGCCGCTTGCAACCATATCATCGCGGCCGCAGTCAATGGCGGTAGCCCACTTCCATCTTCTCAGATGGAAGTCGAGCTTCACCATAATCATAACAACAACAACAATAACAACAACACGAACACGAAGAAGCAGGTAAAATATAAAGAGTGTCTCAAAAACCATGCGGCCTCCATGGGAGGTAATGCCACAGATGGGTGTGGCGAGTTCATGCCGAGTGGAGAAGAAGGATCCATTGAAGCACTCACGTGTTCGGCTTGCAATTGTCATAGAAACTTCCATCGAAAAGAGATCGAGGGAGAACCCTATGATTGGCTCCACCACCCTCGACTCGGGAGGAAGCTCCTCGTCGGAGGGAAGAACATGATCGCCCCACCAGAGGCAGCTGCATTTGCGTATCCATCCGTGGCGGGGCCGGCGTTCATATCGTCTAGAGCACAACCCCACCACATGATAATGTCGTACAACATGCTCGGCGGGGGAGGTGGGCAGTCAGAGTCGGAGGAGCACGAGGAGGCGAGGGCGTACTCGGGGCCAATGATGAACAAGAAGCGATTCCGAACGAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCTGAGAAAGTTGGATGGAAGATTCAGAAACAAGAGGAGAGTGTGGTGCAGCAATTCTGTGAAGAGATTGGAGTGAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAATAAGCACAATCTTGGGAAGAAGGATACCATTTCTCCTCCCCATTCTCCTACTCCCTTAACTTAA

mRNA sequence

ATGGAGCTCACTACTCAAGATCATCCCATTCCCATCCCCATCCCTTTAAATAGTCGCTACGGTGGCCACGACCTCGACCACGACCATGTCATCCATCACCATGACCCGTCCGCCGCTTGCAACCATATCATCGCGGCCGCAGTCAATGGCGGTAGCCCACTTCCATCTTCTCAGATGGAAGTCGAGCTTCACCATAATCATAACAACAACAACAATAACAACAACACGAACACGAAGAAGCAGGTAAAATATAAAGAGTGTCTCAAAAACCATGCGGCCTCCATGGGAGGTAATGCCACAGATGGGTGTGGCGAGTTCATGCCGAGTGGAGAAGAAGGATCCATTGAAGCACTCACGTGTTCGGCTTGCAATTGTCATAGAAACTTCCATCGAAAAGAGATCGAGGGAGAACCCTATGATTGGCTCCACCACCCTCGACTCGGGAGGAAGCTCCTCGTCGGAGGGAAGAACATGATCGCCCCACCAGAGGCAGCTGCATTTGCGTATCCATCCGTGGCGGGGCCGGCGTTCATATCGTCTAGAGCACAACCCCACCACATGATAATGTCGTACAACATGCTCGGCGGGGGAGGTGGGCAGTCAGAGTCGGAGGAGCACGAGGAGGCGAGGGCGTACTCGGGGCCAATGATGAACAAGAAGCGATTCCGAACGAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCTGAGAAAGTTGGATGGAAGATTCAGAAACAAGAGGAGAGTGTGGTGCAGCAATTCTGTGAAGAGATTGGAGTGAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAATAAGCACAATCTTGGGAAGAAGGATACCATTTCTCCTCCCCATTCTCCTACTCCCTTAACTTAA

Coding sequence (CDS)

ATGGAGCTCACTACTCAAGATCATCCCATTCCCATCCCCATCCCTTTAAATAGTCGCTACGGTGGCCACGACCTCGACCACGACCATGTCATCCATCACCATGACCCGTCCGCCGCTTGCAACCATATCATCGCGGCCGCAGTCAATGGCGGTAGCCCACTTCCATCTTCTCAGATGGAAGTCGAGCTTCACCATAATCATAACAACAACAACAATAACAACAACACGAACACGAAGAAGCAGGTAAAATATAAAGAGTGTCTCAAAAACCATGCGGCCTCCATGGGAGGTAATGCCACAGATGGGTGTGGCGAGTTCATGCCGAGTGGAGAAGAAGGATCCATTGAAGCACTCACGTGTTCGGCTTGCAATTGTCATAGAAACTTCCATCGAAAAGAGATCGAGGGAGAACCCTATGATTGGCTCCACCACCCTCGACTCGGGAGGAAGCTCCTCGTCGGAGGGAAGAACATGATCGCCCCACCAGAGGCAGCTGCATTTGCGTATCCATCCGTGGCGGGGCCGGCGTTCATATCGTCTAGAGCACAACCCCACCACATGATAATGTCGTACAACATGCTCGGCGGGGGAGGTGGGCAGTCAGAGTCGGAGGAGCACGAGGAGGCGAGGGCGTACTCGGGGCCAATGATGAACAAGAAGCGATTCCGAACGAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCTGAGAAAGTTGGATGGAAGATTCAGAAACAAGAGGAGAGTGTGGTGCAGCAATTCTGTGAAGAGATTGGAGTGAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAATAAGCACAATCTTGGGAAGAAGGATACCATTTCTCCTCCCCATTCTCCTACTCCCTTAACTTAA

Protein sequence

MELTTQDHPIPIPIPLNSRYGGHDLDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQMEVELHHNHNNNNNNNNTNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSVAGPAFISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPPHSPTPLT
Homology
[Close]
BLAST of Cp4.1LG01g17110 vs. Swiss-Prot
Match: ZHD4_ARATH (Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana GN=ZHD4 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.7e-61
Identity = 150/311 (48.23%), Postives = 183/311 (58.84%), Query Frame = 1 

Query: 1   MELTTQ-DHPIPIPIPLNSRYGGHDLDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           ME+ +Q DH +PIP  LN+ +GG    H H+IHHHD  AA +       N  +  P   +
Sbjct: 1   MEIASQEDHDMPIP--LNTTFGGGG-SHGHMIHHHDHHAANSAPPTHNNNNTTQPPPMPL 60

Query: 61  EVELH-----HNHNNNNNNNNTNT---KKQVKYKECLKNHAASMGGNATDGCGEFMPSGE 120
               H     H+H+ + ++   N    K  +KYKECLKNHAA+MGGNATDGCGEFMPSGE
Sbjct: 61  HGNGHGNNYDHHHHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFMPSGE 120

Query: 121 EGSIEALTCSACNCHRNFHRKEIEGE-------PYDWLHHPRLGRKLLVGGKNMIAPPEA 180
           +GSIEALTCSACNCHRNFHRKE+EGE       PY   H     RKL++  + +      
Sbjct: 121 DGSIEALTCSACNCHRNFHRKEVEGELAATAMSPY---HQHPPHRKLMLNHQKI------ 180

Query: 181 AAFAYPSVAGPAFISSRAQPHHMIM-----SYNMLGGGGGQSESEEHEEARAYSGPMMN- 240
                            A PH MIM     +Y  +       +  E +     S  + N 
Sbjct: 181 ---------------RSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRSLPNL 240

Query: 241 ----KKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNN 286
               KKRFRTKFT EQKEKML FAEKVGWKIQ+QE+ VVQ+FCEEIGVKRRVLKVWMHNN
Sbjct: 241 PYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVWMHNN 284

[Close]
BLAST of Cp4.1LG01g17110 vs. Swiss-Prot
Match: ZHD3_ARATH (Zinc-finger homeodomain protein 3 OS=Arabidopsis thaliana GN=ZHD3 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.1e-60
Identity = 144/297 (48.48%), Postives = 180/297 (60.61%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPIPLNSRYGGHDLDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQME 60
           ME+ +Q+ PIPI    N+ YG     H ++ HHH  ++A + +     N   PL  S   
Sbjct: 1   MEIASQEDPIPI----NTSYGNSGGGHGNMNHHHHANSAPSSLNITTSN---PLLVSSNS 60

Query: 61  VELHHNHNNNNNNNN------TNTKKQ----VKYKECLKNHAASMGGNATDGCGEFMPSG 120
             L  NH+++++++       TN KK+    +KYKECLKNHAA+MGGNA DGCGEFMPSG
Sbjct: 61  NGLGKNHDHSHHHHVGYNIMVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSG 120

Query: 121 EEGSIEALTCSACNCHRNFHRKEIEGE------PYDWLHHPRLGRKLLVGGKNMIAPPEA 180
           EEGSIEALTCS CNCHRNFHR+E EGE      PY   H P   ++ L+    MI  P  
Sbjct: 121 EEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNHHQPPPQQRKLMFHHKMIKSPLP 180

Query: 181 AAFAYPSVAGPAFISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRT 240
                P   G     S ++   ++       GGG  +  +       YS     KKRFRT
Sbjct: 181 QQMIMP--IGVTTAGSNSESEDLMEEE----GGGSLTFRQPPPPPSPYSYGHNQKKRFRT 240

Query: 241 KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKK 282
           KFT EQKEKM+ FAE+VGWKIQ+QEESVVQQ C+EIG++RRVLKVWMHNNK NL KK
Sbjct: 241 KFTQEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIRRRVLKVWMHNNKQNLSKK 284

[Close]
BLAST of Cp4.1LG01g17110 vs. Swiss-Prot
Match: ZHD4_ORYSJ (Zinc-finger homeodomain protein 4 OS=Oryza sativa subsp. japonica GN=ZHD4 PE=2 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-53
Identity = 123/241 (51.04%), Postives = 143/241 (59.34%), Query Frame = 1 

Query: 82  VKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIE------ 141
           VKY+ECLKNHAA++GGNATDGCGEFMPSGEEGS+EAL CSAC CHRNFHRKE +      
Sbjct: 143 VKYRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKEADDLDADS 202

Query: 142 ---------GEPYDWL------HHPRLGRKLLVGGKNMIAPPEAAAFAYPSVAGPAFISS 201
                    G  +  L      HH + G  LLV G +      AAA A P    P     
Sbjct: 203 CAAALRAAAGRHHHLLGPALPHHHHKNGGGLLVAGGDPYGAAYAAARALPPPPPPP-PHG 262

Query: 202 RAQPHHMIMSYNML-----------GGGGGQSESEEHEEARAYSGPMMNKKRFRTKFTAE 261
               H +IM  NM+           GGGGG          R       +KKRFRTKFTAE
Sbjct: 263 HHHHHQIIMPLNMIHTSESDEMDVSGGGGGVG--------RGGGSSSSSKKRFRTKFTAE 322

Query: 262 QKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPPHS 291
           QK +ML FAE+VGW++QK ++++V  FC+EIGVKRRVLKVWMHNNKHNL KK   S P  
Sbjct: 323 QKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLKVWMHNNKHNLAKKPLPSSPPP 374

[Close]
BLAST of Cp4.1LG01g17110 vs. Swiss-Prot
Match: ZHD3_ORYSJ (Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica GN=ZHD3 PE=3 SV=3)

HSP 1 Score: 187.6 bits (475), Expect = 2.0e-46
Identity = 126/310 (40.65%), Postives = 169/310 (54.52%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPI-PLNSRYGGHDLDHDHVIHHHDPSAACNHIIAAAVNG---GSPLPS 60
           M+L+     +P+P+    S Y G  L HDH  HHH             +NG     P P 
Sbjct: 1   MDLSGAQGELPLPMHAAASPYLG--LHHDHH-HHHGGGGG-----GGGMNGRHMSPPTPP 60

Query: 61  SQMEVELHHNHNNNNNNNNTNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIE 120
           +  E       +      +++     +Y+ECLKNHAA++GG+ATDGCGEFMP GEEGS++
Sbjct: 61  AAAE------ESKAVVVVSSSATAAARYRECLKNHAAAIGGSATDGCGEFMPGGEEGSLD 120

Query: 121 ALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSVAGPA 180
           AL CSAC CHRNFHRKE++      LHH     +LL  G    A P      +  +    
Sbjct: 121 ALRCSACGCHRNFHRKELDAAAAPPLHHHH--HQLLGVG----AHPRGHGHHHHHL---- 180

Query: 181 FISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRTKFTAEQKEKMLR 240
            +++   P  M+M  + +        SE  + A    G    +KRFRTKFTAEQK +ML 
Sbjct: 181 LVAALPPPTRMVMPLSAM------HTSESDDAAARPGGGAAARKRFRTKFTAEQKARMLG 240

Query: 241 FAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKK--------------D 293
           FAE+VGW++QK E++VVQ+FC+E+GVKRRVLKVWMHNNKH L ++              D
Sbjct: 241 FAEEVGWRLQKLEDAVVQRFCQEVGVKRRVLKVWMHNNKHTLARRHLHPSPAAAAGDDDD 280

[Close]
BLAST of Cp4.1LG01g17110 vs. Swiss-Prot
Match: ZHD5_ARATH (Zinc-finger homeodomain protein 5 OS=Arabidopsis thaliana GN=ZHD5 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.4e-44
Identity = 122/295 (41.36%), Postives = 154/295 (52.20%), Query Frame = 1 

Query: 49  NGGSPLPSSQMEVELHHNHNNNNNNNNTNTKKQ----------------------VKYKE 108
           N G  + S+ +   +  N N NNNN   +   Q                      V+Y+E
Sbjct: 19  NNGGVVISNIISTNIDDNCNGNNNNTRVSCNSQTLDHHQSKSPSSFSISAAAKPTVRYRE 78

Query: 109 CLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEG---------E 168
           CLKNHAAS+GG+  DGCGEFMPSGEEG+IEAL C+AC+CHRNFHRKE++G          
Sbjct: 79  CLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCHRNFHRKEMDGVGSSDLISHH 138

Query: 169 PYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSVAGPAFISSRAQP--HHMI------- 228
            +   HH + G     GG+    PP       P +  P       QP  HH         
Sbjct: 139 RHHHYHHNQYGGG---GGRR---PPPPNMMLNPLMLPP---PPNYQPIHHHKYGMSPPGG 198

Query: 229 ------MSYNMLGGGGGQSESEEH---------EEARAYSGPM-----MNKKRFRTKFTA 284
                 MS    GGGGG   S E          E A A +G M      +KKRFRTKFT 
Sbjct: 199 GGMVTPMSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAGQMAFSMSSSKKRFRTKFTT 258

[Close]
BLAST of Cp4.1LG01g17110 vs. TrEMBL
Match: A0A0A0KSI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527900 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 5.3e-131
Identity = 245/306 (80.07%), Postives = 255/306 (83.33%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPIP--LNSRYGGHDLDH----DHVIHHHDPSAACNHIIAAAVNGGSPL 60
           MELTT D PIPIPIP  LNSRY GHD DH    DH+IHHHD S+  NHII+A VNGG+  
Sbjct: 1   MELTTHDPPIPIPIPIPLNSRYAGHDHDHNHDHDHIIHHHDSSSTRNHIISATVNGGN-- 60

Query: 61  PSSQMEVELHHNHNNNNNNNNTNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGS 120
              QMEV+LHH+ NNNNNN     KK +KYKECLKNHAASMGGNATDGCGEFMPSGEEGS
Sbjct: 61  ---QMEVDLHHHTNNNNNN-----KKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEGS 120

Query: 121 IEALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSVAG 180
           IEALTC ACNCHRNFHRKEIEGEPYDWLHH RLGRKLLVGGKNMI PPE AAFAYP+  G
Sbjct: 121 IEALTCLACNCHRNFHRKEIEGEPYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGG 180

Query: 181 PAFISSRA---QPHHMIMSYNMLGGGGGQSESEEHEE-------ARAYSGPMMNKKRFRT 240
             FISSRA   QPHHMIMSYNMLGGGGG SESEE EE        R YSG MMNKKRFRT
Sbjct: 181 ATFISSRAATTQPHHMIMSYNMLGGGGGHSESEEQEEGMGAGVGGRVYSGAMMNKKRFRT 240

Query: 241 KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTI 291
           KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMHNNKHNL KKDT+
Sbjct: 241 KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTM 296

[Close]
BLAST of Cp4.1LG01g17110 vs. TrEMBL
Match: B9SIQ1_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0825030 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 3.7e-76
Identity = 183/318 (57.55%), Postives = 214/318 (67.30%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPIPLNSRYGGHD------LDHDHVIHH-HDPSAACNHIIAAAV----- 60
           MEL++  H + IPIPLNS YGG          H H+IHH H  S   NHII ++      
Sbjct: 1   MELSS--HEVEIPIPLNSTYGGGHGHAHGGHGHGHMIHHDHHNSTPHNHIIPSSAPQLTS 60

Query: 61  -NGGSPLPSSQMEVELHHNHNNNNNNNNTNTKKQVKYKECLKNHAASMGGNATDGCGEFM 120
            NG S LP++ ++    H+H  +  +     KK VKYKECLKNHAA+MGGNATDGCGEFM
Sbjct: 61  NNGPSSLPNTGLD---DHHHVTSTTST---FKKMVKYKECLKNHAAAMGGNATDGCGEFM 120

Query: 121 PSGEEGSIEALTCSACNCHRNFHRKEIEGE--PYDWL--HHPRLGRKLLVGGKNMIAPPE 180
           PSGEEGSIEALTCSACNCHRNFHRKEI+GE  P D+   H  R+GRK+++G    I  PE
Sbjct: 121 PSGEEGSIEALTCSACNCHRNFHRKEIDGETNPCDYYPPHFNRVGRKVILGHHKNILAPE 180

Query: 181 AAAFAYPSVAGPAFISSRAQ--PHH-MIMSYNMLGGGGGQSESEEHEEARAY---SGPMM 240
           A    YP+  G   + SRA   PHH MIMSYNM  GG   SES+E E+           +
Sbjct: 181 A--LGYPTGTG-TLVPSRATVAPHHQMIMSYNM--GGSLPSESDEQEDGGGVVMARPQQL 240

Query: 241 NKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHN 295
            KKR+RTKF+ EQKEKML FAEKVGWKIQKQEE+VVQQFC+EIGVKRRVLKVWMHNNKHN
Sbjct: 241 VKKRYRTKFSQEQKEKMLNFAEKVGWKIQKQEEAVVQQFCQEIGVKRRVLKVWMHNNKHN 300

[Close]
BLAST of Cp4.1LG01g17110 vs. TrEMBL
Match: A0A0D2RJ96_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G090900 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 4.1e-75
Identity = 178/304 (58.55%), Postives = 206/304 (67.76%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPIPLNSRYGG---HDLDHDHVIHHHDPSAACNHIIAAAV-----NGGS 60
           ME++ Q+  IPIP  LNS YGG   H   H H+IHH +P+A  NHII ++      NG S
Sbjct: 1   MEISCQEGEIPIP--LNSTYGGGHGHGHGHGHMIHH-EPAAPHNHIIPSSAPPILSNGPS 60

Query: 61  PLPSSQMEVELHHNHNNNNNNNNTNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEE 120
            L              + N +++   KK V+Y+ECLKNHAA+MGGNATDGCGEFMPSGEE
Sbjct: 61  SL--------------STNLDDHVPYKKAVRYRECLKNHAAAMGGNATDGCGEFMPSGEE 120

Query: 121 GSIEALTCSACNCHRNFHRKEIEGEPYDW----LHHP----RLGRKLLVGGKNMIAPPEA 180
           G+IEAL CSACNCHRNFHRKEIEGEP  +    LH P    R+GRKL++G    I PPE 
Sbjct: 121 GTIEALNCSACNCHRNFHRKEIEGEPSSFDCYPLHSPHLSSRVGRKLILGHHKSILPPE- 180

Query: 181 AAFAYPSVAGPAFISSRA--QPHHMIMSYNMLGGGGGQSESEEHEE---ARAYSGPM-MN 240
            A  YP+      I SRA   PH MIMSYNM   G   SES+E  E       S P+ + 
Sbjct: 181 -ALGYPT---GTLIHSRAAPTPHQMIMSYNM---GSLPSESDEQPEDGGGVVGSRPLQLM 240

Query: 241 KKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNL 283
           KKRFRTKFT EQKEKML FAEKVGWKIQKQEE+VVQQFC+EIGVKRRVLKVWMHNNKHNL
Sbjct: 241 KKRFRTKFTQEQKEKMLNFAEKVGWKIQKQEEAVVQQFCQEIGVKRRVLKVWMHNNKHNL 279

[Close]
BLAST of Cp4.1LG01g17110 vs. TrEMBL
Match: A0A061GFH0_THECC (Homeobox protein 31 OS=Theobroma cacao GN=TCM_027142 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 7.0e-75
Identity = 174/315 (55.24%), Postives = 205/315 (65.08%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPIPLNSRYGGHDLDHDHVIHHHDPSAACNHIIAAAVNG----GSPLPS 60
           MEL++Q+  +PIP  LNS YGG      H+IHH   +A  NHII ++       G  +P+
Sbjct: 1   MELSSQEGEMPIP--LNSTYGG-----GHMIHHDHHAAPHNHIIVSSAPQITCTGPSIPT 60

Query: 61  SQMEVELHHNHNNNNNNNNTNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIE 120
                       N +++++   KK V+Y+ECLKNHAA+MGGNATDGCGEFMPSGEEGSIE
Sbjct: 61  ------------NLDDDHHVGFKKVVRYRECLKNHAAAMGGNATDGCGEFMPSGEEGSIE 120

Query: 121 ALTCSACNCHRNFHRKEIEGEPYDWL---------HHPRLGRKLLVGGKNMIAPPEAAAF 180
           ALTCSACNCHRNFHRKEIEGEP             H  R GRKL +G    I PPEA   
Sbjct: 121 ALTCSACNCHRNFHRKEIEGEPSPSSCDCYPSHSPHLSRAGRKLFLGHHKSILPPEALGL 180

Query: 181 AYPSVAGPAFISSRA----QPHHMIMSYNMLGGGGGQSESEEHEEARAY--SGPMMNKKR 240
            YP+  G   I SRA     PH MIMSYNM   G   SES++  +          + KKR
Sbjct: 181 GYPTATG-TLIHSRAAPTPTPHQMIMSYNM---GSLPSESDDQADGGGVVTRPHQLVKKR 240

Query: 241 FRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKK 295
           FRTKFT EQKEKML FA+KVGWKIQKQEE+VVQQFC+EIGVKRRVLKVWMHNNKHNL KK
Sbjct: 241 FRTKFTQEQKEKMLNFADKVGWKIQKQEEAVVQQFCQEIGVKRRVLKVWMHNNKHNLAKK 292

[Close]
BLAST of Cp4.1LG01g17110 vs. TrEMBL
Match: U5GNK9_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s23860g PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.6e-74
Identity = 168/298 (56.38%), Postives = 197/298 (66.11%), Query Frame = 1 

Query: 2   ELTTQDHPIPIPIPLNSRYGG-HDLDHDHVIHHHDPSAACNH--IIAAAVNGGSPLPSSQ 61
           E+    H   IPIPLNS +GG H   H H+IHH  P+   NH  II++       +PSS 
Sbjct: 16  EMELSSHEAGIPIPLNSTFGGAHGHGHGHLIHHDHPAVPHNHNNIISSTA---PQIPSSN 75

Query: 62  MEVELHHNHNNNNNNNNTNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 121
               +      + ++N+   KK V+Y+ECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL
Sbjct: 76  NGTSIT---TASIDDNHVPYKKMVRYRECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 135

Query: 122 TCSACNCHRNFHRKEIEGEPYDW----------LHHPRLGRKLLVGGKNMIAPPEAAAFA 181
           TCSACNCHRNFHRKEIEGE              +H  RLGRK+++G    I  PEA    
Sbjct: 136 TCSACNCHRNFHRKEIEGEHTSCTGDHCYHNSPVHFNRLGRKVILGHHKSILAPEA--LG 195

Query: 182 YPSVAGPAFISSRAQPHH-MIMSYNMLGGGGGQSESEEHEEARAY---SGPMMNKKRFRT 241
           YP+  G    S  + PHH MIMSYNM   G   SES+E E+           + KKRFRT
Sbjct: 196 YPTATGTLIPSRASAPHHQMIMSYNM---GSLPSESDEQEDGGGVLMARPAQLMKKRFRT 255

Query: 242 KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKD 283
           KF+ EQKEKML FAEKVGWK+QKQEE+VVQQFC+EIGVKRRVLKVWMHNNKH+L KK+
Sbjct: 256 KFSQEQKEKMLNFAEKVGWKLQKQEETVVQQFCQEIGVKRRVLKVWMHNNKHSLAKKN 302

[Close]
BLAST of Cp4.1LG01g17110 vs. TAIR10
Match: AT1G14440.1 (AT1G14440.1 homeobox protein 31)

HSP 1 Score: 236.5 bits (602), Expect = 2.1e-62
Identity = 150/311 (48.23%), Postives = 183/311 (58.84%), Query Frame = 1 

Query: 1   MELTTQ-DHPIPIPIPLNSRYGGHDLDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           ME+ +Q DH +PIP  LN+ +GG    H H+IHHHD  AA +       N  +  P   +
Sbjct: 1   MEIASQEDHDMPIP--LNTTFGGGG-SHGHMIHHHDHHAANSAPPTHNNNNTTQPPPMPL 60

Query: 61  EVELH-----HNHNNNNNNNNTNT---KKQVKYKECLKNHAASMGGNATDGCGEFMPSGE 120
               H     H+H+ + ++   N    K  +KYKECLKNHAA+MGGNATDGCGEFMPSGE
Sbjct: 61  HGNGHGNNYDHHHHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFMPSGE 120

Query: 121 EGSIEALTCSACNCHRNFHRKEIEGE-------PYDWLHHPRLGRKLLVGGKNMIAPPEA 180
           +GSIEALTCSACNCHRNFHRKE+EGE       PY   H     RKL++  + +      
Sbjct: 121 DGSIEALTCSACNCHRNFHRKEVEGELAATAMSPY---HQHPPHRKLMLNHQKI------ 180

Query: 181 AAFAYPSVAGPAFISSRAQPHHMIM-----SYNMLGGGGGQSESEEHEEARAYSGPMMN- 240
                            A PH MIM     +Y  +       +  E +     S  + N 
Sbjct: 181 ---------------RSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRSLPNL 240

Query: 241 ----KKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNN 286
               KKRFRTKFT EQKEKML FAEKVGWKIQ+QE+ VVQ+FCEEIGVKRRVLKVWMHNN
Sbjct: 241 PYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVWMHNN 284

[Close]
BLAST of Cp4.1LG01g17110 vs. TAIR10
Match: AT2G02540.1 (AT2G02540.1 homeobox protein 21)

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-61
Identity = 144/297 (48.48%), Postives = 180/297 (60.61%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPIPLNSRYGGHDLDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQME 60
           ME+ +Q+ PIPI    N+ YG     H ++ HHH  ++A + +     N   PL  S   
Sbjct: 1   MEIASQEDPIPI----NTSYGNSGGGHGNMNHHHHANSAPSSLNITTSN---PLLVSSNS 60

Query: 61  VELHHNHNNNNNNNN------TNTKKQ----VKYKECLKNHAASMGGNATDGCGEFMPSG 120
             L  NH+++++++       TN KK+    +KYKECLKNHAA+MGGNA DGCGEFMPSG
Sbjct: 61  NGLGKNHDHSHHHHVGYNIMVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSG 120

Query: 121 EEGSIEALTCSACNCHRNFHRKEIEGE------PYDWLHHPRLGRKLLVGGKNMIAPPEA 180
           EEGSIEALTCS CNCHRNFHR+E EGE      PY   H P   ++ L+    MI  P  
Sbjct: 121 EEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNHHQPPPQQRKLMFHHKMIKSPLP 180

Query: 181 AAFAYPSVAGPAFISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRT 240
                P   G     S ++   ++       GGG  +  +       YS     KKRFRT
Sbjct: 181 QQMIMP--IGVTTAGSNSESEDLMEEE----GGGSLTFRQPPPPPSPYSYGHNQKKRFRT 240

Query: 241 KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKK 282
           KFT EQKEKM+ FAE+VGWKIQ+QEESVVQQ C+EIG++RRVLKVWMHNNK NL KK
Sbjct: 241 KFTQEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIRRRVLKVWMHNNKQNLSKK 284

[Close]
BLAST of Cp4.1LG01g17110 vs. TAIR10
Match: AT1G75240.1 (AT1G75240.1 homeobox protein 33)

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-45
Identity = 122/295 (41.36%), Postives = 154/295 (52.20%), Query Frame = 1 

Query: 49  NGGSPLPSSQMEVELHHNHNNNNNNNNTNTKKQ----------------------VKYKE 108
           N G  + S+ +   +  N N NNNN   +   Q                      V+Y+E
Sbjct: 19  NNGGVVISNIISTNIDDNCNGNNNNTRVSCNSQTLDHHQSKSPSSFSISAAAKPTVRYRE 78

Query: 109 CLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEG---------E 168
           CLKNHAAS+GG+  DGCGEFMPSGEEG+IEAL C+AC+CHRNFHRKE++G          
Sbjct: 79  CLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCHRNFHRKEMDGVGSSDLISHH 138

Query: 169 PYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSVAGPAFISSRAQP--HHMI------- 228
            +   HH + G     GG+    PP       P +  P       QP  HH         
Sbjct: 139 RHHHYHHNQYGGG---GGRR---PPPPNMMLNPLMLPP---PPNYQPIHHHKYGMSPPGG 198

Query: 229 ------MSYNMLGGGGGQSESEEH---------EEARAYSGPM-----MNKKRFRTKFTA 284
                 MS    GGGGG   S E          E A A +G M      +KKRFRTKFT 
Sbjct: 199 GGMVTPMSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAGQMAFSMSSSKKRFRTKFTT 258

[Close]
BLAST of Cp4.1LG01g17110 vs. TAIR10
Match: AT4G24660.1 (AT4G24660.1 homeobox protein 22)

HSP 1 Score: 171.4 bits (433), Expect = 8.3e-43
Identity = 93/202 (46.04%), Postives = 124/202 (61.39%), Query Frame = 1 

Query: 81  QVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYD 140
           +++Y+ECLKNHA ++GG+A DGC EFMPSGE+G+++AL C+AC CHRNFHRKE E     
Sbjct: 46  KIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES---- 105

Query: 141 WLHHPRLGRKLLVGGKNMIAPPEAAAFAYP-SVAGPAFISSRAQPHHMIMSYNMLGGGGG 200
                       +GG+    P        P    G   ++S A P+              
Sbjct: 106 ------------IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYR------------P 165

Query: 201 QSESEEHEEARAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEE 260
            + S + E+    S      KRFRTKFTAEQKEKML FAE++GW+IQK ++  V+QFC E
Sbjct: 166 PAASGDEEDTSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAE 219

Query: 261 IGVKRRVLKVWMHNNKHNLGKK 282
            GV+R+VLK+WMHNNK++LGKK
Sbjct: 226 TGVRRQVLKIWMHNNKNSLGKK 219

[Close]
BLAST of Cp4.1LG01g17110 vs. TAIR10
Match: AT5G65410.1 (AT5G65410.1 homeobox protein 25)

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-42
Identity = 94/211 (44.55%), Postives = 129/211 (61.14%), Query Frame = 1 

Query: 83  KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYDWL 142
           +++ECLKN A ++GG+A DGCGEFMP+G EG+I+AL C+AC CHRNFHRKE+   PY   
Sbjct: 74  RFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKEL---PY--F 133

Query: 143 HHPRLGRKLLVGGKNMIAPPEAAAFAYPSVAGPAFISSRAQPHHMIMSYNMLGGGGGQSE 202
           HH           ++   PP    +  P+        S+A P  + +          +  
Sbjct: 134 HH--------APPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQ------RER 193

Query: 203 SEEHEEARAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGV 262
           SE+  E  +       +KR RTKFTAEQKE+ML  AE++GW+IQ+Q++ V+Q+FC+E GV
Sbjct: 194 SEDPMETSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETGV 253

Query: 263 KRRVLKVWMHNNKHNLGKKDTISPPHSPTPL 294
            R+VLKVW+HNNKH LGK        SP+PL
Sbjct: 254 PRQVLKVWLHNNKHTLGK--------SPSPL 257

[Close]
BLAST of Cp4.1LG01g17110 vs. NCBI nr
Match: gi|659121291|ref|XP_008460585.1| (PREDICTED: zinc-finger homeodomain protein 4 [Cucumis melo])

HSP 1 Score: 481.1 bits (1237), Expect = 1.4e-132
Identity = 245/302 (81.13%), Postives = 257/302 (85.10%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPIP--LNSRYGGHDLDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQ 60
           MELTT D PIPIPIP  LNSRY GH+ DHDH+IHHHDPS+  NHII+A VNG +    +Q
Sbjct: 1   MELTTHDPPIPIPIPIPLNSRYAGHNHDHDHIIHHHDPSSTRNHIISATVNGSN----NQ 60

Query: 61  MEVELHHNHNNNNNNNNTNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120
           MEV+LHH HNNNNNNN    KK +KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL
Sbjct: 61  MEVDLHH-HNNNNNNN----KKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120

Query: 121 TCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSVAGPAFI 180
           TCSACNCHRNFHRKEIEGEPYDWLHH RLGRKLLVGGKNMI PPE AAFAYP+  G  FI
Sbjct: 121 TCSACNCHRNFHRKEIEGEPYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFI 180

Query: 181 SSRA---QPHHMIMSYNMLGGGGGQSESEEHEE-------ARAYSGPMMNKKRFRTKFTA 240
           SSRA   QPHHMIMSYNMLGGGGG SESEE EE        R YSG MMNKKRFRTKFT 
Sbjct: 181 SSRAATTQPHHMIMSYNMLGGGGGHSESEEQEEGIGAGVGGRVYSGAMMNKKRFRTKFTT 240

Query: 241 EQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPPH 291
           EQKEKMLRFAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMHNNKHNL KK+T+SP H
Sbjct: 241 EQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKETMSPSH 293

[Close]
BLAST of Cp4.1LG01g17110 vs. NCBI nr
Match: gi|449450205|ref|XP_004142854.1| (PREDICTED: zinc-finger homeodomain protein 4 [Cucumis sativus])

HSP 1 Score: 475.3 bits (1222), Expect = 7.6e-131
Identity = 245/306 (80.07%), Postives = 255/306 (83.33%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPIP--LNSRYGGHDLDH----DHVIHHHDPSAACNHIIAAAVNGGSPL 60
           MELTT D PIPIPIP  LNSRY GHD DH    DH+IHHHD S+  NHII+A VNGG+  
Sbjct: 1   MELTTHDPPIPIPIPIPLNSRYAGHDHDHNHDHDHIIHHHDSSSTRNHIISATVNGGN-- 60

Query: 61  PSSQMEVELHHNHNNNNNNNNTNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGS 120
              QMEV+LHH+ NNNNNN     KK +KYKECLKNHAASMGGNATDGCGEFMPSGEEGS
Sbjct: 61  ---QMEVDLHHHTNNNNNN-----KKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEGS 120

Query: 121 IEALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSVAG 180
           IEALTC ACNCHRNFHRKEIEGEPYDWLHH RLGRKLLVGGKNMI PPE AAFAYP+  G
Sbjct: 121 IEALTCLACNCHRNFHRKEIEGEPYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGG 180

Query: 181 PAFISSRA---QPHHMIMSYNMLGGGGGQSESEEHEE-------ARAYSGPMMNKKRFRT 240
             FISSRA   QPHHMIMSYNMLGGGGG SESEE EE        R YSG MMNKKRFRT
Sbjct: 181 ATFISSRAATTQPHHMIMSYNMLGGGGGHSESEEQEEGMGAGVGGRVYSGAMMNKKRFRT 240

Query: 241 KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTI 291
           KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMHNNKHNL KKDT+
Sbjct: 241 KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTM 296

[Close]
BLAST of Cp4.1LG01g17110 vs. NCBI nr
Match: gi|641822556|gb|KDO42061.1| (hypothetical protein CISIN_1g048741mg [Citrus sinensis])

HSP 1 Score: 306.2 bits (783), Expect = 6.1e-80
Identity = 183/322 (56.83%), Postives = 209/322 (64.91%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPIPLNSRYGG----HDLDHDHVIHHHDPSAACNHIIAAAVNGGSPLPS 60
           MEL++QD  IPIPI  NS YGG    H + HDH  HHH P    ++II  A +     P 
Sbjct: 1   MELSSQDGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPH---DNIIPVASSAPQISPI 60

Query: 61  SQMEVELHHNHNNNNNNNNTNT-KKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSI 120
           +   + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+I
Sbjct: 61  NGPPIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTI 120

Query: 121 EALTCSACNCHRNFHRKEIEGE--------PYDWLHHP------RLGRKLLVGGKNMIAP 180
           EALTCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I  
Sbjct: 121 EALTCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILA 180

Query: 181 PEAAAFAYPSVAGPAFISSRA-----QPHHMIMSYNMLGGGGGQSESEEHEEA------- 240
               A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+        
Sbjct: 181 ATPEALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVM 240

Query: 241 RAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKV 292
            A     + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKV
Sbjct: 241 AARPTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKV 300

[Close]
BLAST of Cp4.1LG01g17110 vs. NCBI nr
Match: gi|567877747|ref|XP_006431432.1| (hypothetical protein CICLE_v10003702mg [Citrus clementina])

HSP 1 Score: 305.1 bits (780), Expect = 1.4e-79
Identity = 182/318 (57.23%), Postives = 207/318 (65.09%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPIPLNSRYGG----HDLDHDHVIHHHDPSAACNHIIAAAVNGGSPLPS 60
           MEL++QD  IPIPI  NS YGG    H + HDH  HHH P    ++II  A +     P 
Sbjct: 1   MELSSQDGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPH---DNIIPVASSAPQISPI 60

Query: 61  SQMEVELHHNHNNNNNNNNTNT-KKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSI 120
           +   + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+I
Sbjct: 61  NGPPIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTI 120

Query: 121 EALTCSACNCHRNFHRKEIEGE--------PYDWLHHP------RLGRKLLVGGKNMIAP 180
           EALTCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I  
Sbjct: 121 EALTCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILA 180

Query: 181 PEAAAFAYPSVAGPAFISSRA-----QPHHMIMSYNMLGGGGGQSESEEHEEA------- 240
               A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+        
Sbjct: 181 ATPEALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVM 240

Query: 241 RAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKV 288
            A     + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKV
Sbjct: 241 AARPTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKV 300

[Close]
BLAST of Cp4.1LG01g17110 vs. NCBI nr
Match: gi|568833299|ref|XP_006470838.1| (PREDICTED: zinc-finger homeodomain protein 4 [Citrus sinensis])

HSP 1 Score: 304.7 bits (779), Expect = 1.8e-79
Identity = 182/322 (56.52%), Postives = 209/322 (64.91%), Query Frame = 1 

Query: 1   MELTTQDHPIPIPIPLNSRYGG----HDLDHDHVIHHHDPSAACNHIIAAAVNGGSPLPS 60
           MEL++Q+  IPIPI  NS YGG    H + HDH  HHH P    ++II  A +     P 
Sbjct: 1   MELSSQEGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPH---DNIIPVASSAPQISPI 60

Query: 61  SQMEVELHHNHNNNNNNNNTNT-KKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSI 120
           +   + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+I
Sbjct: 61  NGPPIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTI 120

Query: 121 EALTCSACNCHRNFHRKEIEGE--------PYDWLHHP------RLGRKLLVGGKNMIAP 180
           EALTCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I  
Sbjct: 121 EALTCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILA 180

Query: 181 PEAAAFAYPSVAGPAFISSRA-----QPHHMIMSYNMLGGGGGQSESEEHEEA------- 240
               A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+        
Sbjct: 181 ATPEALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVM 240

Query: 241 RAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKV 292
            A     + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKV
Sbjct: 241 AARPTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKV 300

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g17110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZHD4_ARATH3.7e-6148.23Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana GN=ZHD4 PE=1 SV=1[more]
ZHD3_ARATH3.1e-6048.48Zinc-finger homeodomain protein 3 OS=Arabidopsis thaliana GN=ZHD3 PE=1 SV=1[more]
ZHD4_ORYSJ1.3e-5351.04Zinc-finger homeodomain protein 4 OS=Oryza sativa subsp. japonica GN=ZHD4 PE=2 S... [more]
ZHD3_ORYSJ2.0e-4640.65Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica GN=ZHD3 PE=3 S... [more]
ZHD5_ARATH2.4e-4441.36Zinc-finger homeodomain protein 5 OS=Arabidopsis thaliana GN=ZHD5 PE=1 SV=1[more]
BLAST of Cp4.1LG01g17110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSI7_CUCSA5.3e-13180.07Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527900 PE=4 SV=1[more]
B9SIQ1_RICCO3.7e-7657.55Transcription factor, putative OS=Ricinus communis GN=RCOM_0825030 PE=4 SV=1[more]
A0A0D2RJ96_GOSRA4.1e-7558.55Uncharacterized protein OS=Gossypium raimondii GN=B456_011G090900 PE=4 SV=1[more]
A0A061GFH0_THECC7.0e-7555.24Homeobox protein 31 OS=Theobroma cacao GN=TCM_027142 PE=4 SV=1[more]
U5GNK9_POPTR1.6e-7456.38Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s23860g P... [more]
BLAST of Cp4.1LG01g17110 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14440.12.1e-6248.23 homeobox protein 31[more]
AT2G02540.11.8e-6148.48 homeobox protein 21[more]
AT1G75240.11.4e-4541.36 homeobox protein 33[more]
AT4G24660.18.3e-4346.04 homeobox protein 22[more]
AT5G65410.11.8e-4244.55 homeobox protein 25[more]
BLAST of Cp4.1LG01g17110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121291|ref|XP_008460585.1|1.4e-13281.13PREDICTED: zinc-finger homeodomain protein 4 [Cucumis melo][more]
gi|449450205|ref|XP_004142854.1|7.6e-13180.07PREDICTED: zinc-finger homeodomain protein 4 [Cucumis sativus][more]
gi|641822556|gb|KDO42061.1|6.1e-8056.83hypothetical protein CISIN_1g048741mg [Citrus sinensis][more]
gi|567877747|ref|XP_006431432.1|1.4e-7957.23hypothetical protein CICLE_v10003702mg [Citrus clementina][more]
gi|568833299|ref|XP_006470838.1|1.8e-7956.52PREDICTED: zinc-finger homeodomain protein 4 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR006456ZF_HD_homeobox_Cys/His_dimer
IPR006455Homeodomain_ZF_HD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17110.1Cp4.1LG01g17110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006455Homeodomain, ZF-HD classTIGRFAMsTIGR01565TIGR01565coord: 219..275
score: 6.5
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPRODOMPD125774coord: 82..137
score: 2.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 81..134
score: 1.5
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMsTIGR01566TIGR01566coord: 83..134
score: 6.6
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROFILEPS51523ZF_HD_DIMERcoord: 84..133
score: 27
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 208..281
score: 6.8
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 211..280
score: 5.91
NoneNo IPR availablePANTHERPTHR31948FAMILY NOT NAMEDcoord: 43..293
score: 1.6E
NoneNo IPR availablePANTHERPTHR31948:SF19ZINC-FINGER HOMEODOMAIN PROTEIN 3-RELATEDcoord: 43..293
score: 1.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g17110Cucsa.011620Cucumber (Gy14) v1cgycpeB0524
Cp4.1LG01g17110CmaCh04G018950Cucurbita maxima (Rimu)cmacpeB725
Cp4.1LG01g17110CmoCh04G019970Cucurbita moschata (Rifu)cmocpeB677
Cp4.1LG01g17110Cla001881Watermelon (97103) v1cpewmB469
Cp4.1LG01g17110Csa5G527900Cucumber (Chinese Long) v2cpecuB453
Cp4.1LG01g17110MELO3C022921Melon (DHL92) v3.5.1cpemeB371
Cp4.1LG01g17110ClCG11G000100Watermelon (Charleston Gray)cpewcgB362
Cp4.1LG01g17110CSPI05G18630Wild cucumber (PI 183967)cpecpiB458
Cp4.1LG01g17110Lsi11G001010Bottle gourd (USVL1VR-Ls)cpelsiB321
Cp4.1LG01g17110MELO3C022921.2Melon (DHL92) v3.6.1cpemedB429
Cp4.1LG01g17110CsaV3_5G027460Cucumber (Chinese Long) v3cpecucB0560
Cp4.1LG01g17110BhiUN159G31Wax gourdcpewgoB0540
Cp4.1LG01g17110CsGy5G018220Cucumber (Gy14) v2cgybcpeB664
Cp4.1LG01g17110Carg26173Silver-seed gourdcarcpeB0397
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g17110Cucumber (Gy14) v1cgycpeB0502
Cp4.1LG01g17110Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g17110Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g17110Cucurbita moschata (Rifu)cmocpeB680
Cp4.1LG01g17110Cucurbita moschata (Rifu)cmocpeB682
Cp4.1LG01g17110Cucurbita moschata (Rifu)cmocpeB686
Cp4.1LG01g17110Wild cucumber (PI 183967)cpecpiB453
Cp4.1LG01g17110Cucumber (Chinese Long) v2cpecuB448
Cp4.1LG01g17110Cucumber (Chinese Long) v2cpecuB449
Cp4.1LG01g17110Watermelon (Charleston Gray)cpewcgB365
Cp4.1LG01g17110Watermelon (97103) v1cpewmB455
Cp4.1LG01g17110Cucumber (Gy14) v2cgybcpeB663
Cp4.1LG01g17110Cucumber (Chinese Long) v3cpecucB0557