CsaV3_5G027460 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G027460
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	zinc-finger homeodomain protein 4
Location	chr5 : 22469732 .. 22471636 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAAAAGAAAGGAAAAAAATGAAAGGAAAAAAGAAAAAAGAAGAGGAAATTGTTAGGATGGTAGGAGGACCCTAAAAGTATGTATAGAGCTTTCTGTTTTTTTGTGTATAACTATAAACTCTTTACTTATTATGTTAGTACTGTTCGTTGTGTGTTTTCCCATTTCACTCACCAATCTCAAATCAAACCCTCTCTTCATTTCTTTTTCCTCAAAAAACCATTCCCTTCTTCTCTTCTTCCCTTCCTCCTCTAAATTATAAACAACCCTCTCTCTTTAATCCAATTATATATATATAATAACCCCAAACCCCTATACCCCAAATATTAAATTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTCTCTTCAACTCCTTCATAATAATGGAGCTGACTACTCATGATCCTCCTATCCCCATCCCTATTCCTATCCCCTTAAATAGTCGTTACGCCGGTCACGACCATGACCACAACCATGACCATGACCATATCATCCACCACCATGACTCTTCTTCCACCCGTAACCATATCATTTCAGCTACTGTCAATGGTGGCAACCAAATGGAAGTGGATCTTCATCATCATACCAATAACAATAACAACAACAAGAAGCATATCAAATACAAAGAGTGTCTCAAAAACCATGCAGCTTCCATGGGAGGCAATGCCACAGACGGTTGCGGTGAGTTCATGCCAAGTGGAGAAGAAGGCTCCATTGAAGCCCTCACTTGCTTGGCTTGCAATTGCCATAGAAACTTTCATCGAAAAGAGATCGAAGGAGAACCCTATGATTGGCTCCACCACTCCCGCCTTGGGCGAAAGCTTCTCGTAGGTGGGAAGAACATGATCGGCCCACCAGAGCCTGCAGCATTCGCATACCCAACTGCAGGAGGGGCGACGTTCATATCATCCAGAGCTGCAACAACGCAACCCCACCACATGATAATGTCATACAACATGCTGGGTGGGGGCGGTGGGCACTCGGAGTCAGAGGAGCAGGAGGAAGGAATGGGAGCAGGAGTTGGGGGAAGGGTCTATTCGGGGGCGATGATGAATAAGAAACGATTCCGAACGAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAAAAGCAAGAGGAGAGTGTGGTGCAACAATTCTGTCAAGAGATTGGAGTGAAGAGAAGAGTTCTTAAAGTTTGGATGCACAACAACAAGCACAATCTTGCCAAGAAAGATACAATGTCACCTTCTCATTCTCCTAATAATCCTTTAAATTAAATTAAATTTCTTTAATTTCTTTTTTCTTCTTTTTTTCTTTTTCTCTTTTTAACTCATAAGATTGAATTATATAATTATTATATTACTACTATTGTTGTTGTTAATTATTAGCTAATGATGATGATCAATATGTGTTTGGTACATGTTGAGACATGTTTAAAAAATCTTAGTTATTGCACTGAATCCAAAGGCACTTGATAATTGGTTCTATATTATTAATTAGTTTCTATTTATTGTTGTTATATGTTTATACATATATATTTTTAGAGCACACAATGGTAGGTTGAGTGGATCGAAACCCTCTCACTCCCACTCCCACTTTTAGAATGGAATATCATGGTTAGTTTAACACTTAGCTAATTAAACTCATTTTTGATAAGTGTGTTCATATATATATTAAGGGTGAAGAAGTGTGAGTGTATGTTTGTGTGTATATATTGTAAGTTGGATATAGATAGGGTATGGTATATGACATTAAATATGATTATAATATCTGTTCTTCTTTTGTTTTTGTTTTTGGTAGTTGCATGCCTAACTCTCTTTCTAGCCTTCTCTACCTTTTGTCCTTTGACTTGCTTTTTCTCCCTTTCCAAAAACCCTAATACTCA

mRNA sequence

ATGGAGCTGACTACTCATGATCCTCCTATCCCCATCCCTATTCCTATCCCCTTAAATAGTCGTTACGCCGGTCACGACCATGACCACAACCATGACCATGACCATATCATCCACCACCATGACTCTTCTTCCACCCGTAACCATATCATTTCAGCTACTGTCAATGGTGGCAACCAAATGGAAGTGGATCTTCATCATCATACCAATAACAATAACAACAACAAGAAGCATATCAAATACAAAGAGTGTCTCAAAAACCATGCAGCTTCCATGGGAGGCAATGCCACAGACGGTTGCGGTGAGTTCATGCCAAGTGGAGAAGAAGGCTCCATTGAAGCCCTCACTTGCTTGGCTTGCAATTGCCATAGAAACTTTCATCGAAAAGAGATCGAAGGAGAACCCTATGATTGGCTCCACCACTCCCGCCTTGGGCGAAAGCTTCTCGTAGGTGGGAAGAACATGATCGGCCCACCAGAGCCTGCAGCATTCGCATACCCAACTGCAGGAGGGGCGACGTTCATATCATCCAGAGCTGCAACAACGCAACCCCACCACATGATAATGTCATACAACATGCTGGGTGGGGGCGGTGGGCACTCGGAGTCAGAGGAGCAGGAGGAAGGAATGGGAGCAGGAGTTGGGGGAAGGGTCTATTCGGGGGCGATGATGAATAAGAAACGATTCCGAACGAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAAAAGCAAGAGGAGAGTGTGGTGCAACAATTCTGTCAAGAGATTGGAGTGAAGAGAAGAGTTCTTAAAGTTTGGATGCACAACAACAAGCACAATCTTGCCAAGAAAGATACAATGTCACCTTCTCATTCTCCTAATAATCCTTTAAATTAA

Coding sequence (CDS)

ATGGAGCTGACTACTCATGATCCTCCTATCCCCATCCCTATTCCTATCCCCTTAAATAGTCGTTACGCCGGTCACGACCATGACCACAACCATGACCATGACCATATCATCCACCACCATGACTCTTCTTCCACCCGTAACCATATCATTTCAGCTACTGTCAATGGTGGCAACCAAATGGAAGTGGATCTTCATCATCATACCAATAACAATAACAACAACAAGAAGCATATCAAATACAAAGAGTGTCTCAAAAACCATGCAGCTTCCATGGGAGGCAATGCCACAGACGGTTGCGGTGAGTTCATGCCAAGTGGAGAAGAAGGCTCCATTGAAGCCCTCACTTGCTTGGCTTGCAATTGCCATAGAAACTTTCATCGAAAAGAGATCGAAGGAGAACCCTATGATTGGCTCCACCACTCCCGCCTTGGGCGAAAGCTTCTCGTAGGTGGGAAGAACATGATCGGCCCACCAGAGCCTGCAGCATTCGCATACCCAACTGCAGGAGGGGCGACGTTCATATCATCCAGAGCTGCAACAACGCAACCCCACCACATGATAATGTCATACAACATGCTGGGTGGGGGCGGTGGGCACTCGGAGTCAGAGGAGCAGGAGGAAGGAATGGGAGCAGGAGTTGGGGGAAGGGTCTATTCGGGGGCGATGATGAATAAGAAACGATTCCGAACGAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAAAAGCAAGAGGAGAGTGTGGTGCAACAATTCTGTCAAGAGATTGGAGTGAAGAGAAGAGTTCTTAAAGTTTGGATGCACAACAACAAGCACAATCTTGCCAAGAAAGATACAATGTCACCTTCTCATTCTCCTAATAATCCTTTAAATTAA

Protein sequence

MELTTHDPPIPIPIPIPLNSRYAGHDHDHNHDHDHIIHHHDSSSTRNHIISATVNGGNQMEVDLHHHTNNNNNNKKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSYNMLGGGGGHSESEEQEEGMGAGVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPNNPLN

Homology

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BLAST of CsaV3_5G027460 vs. NCBI nr
Match: XP_004142854.1 (PREDICTED: zinc-finger homeodomain protein 4 [Cucumis sativus] >KGN51402.1 hypothetical protein Csa_5G527900 [Cucumis sativus])

HSP 1 Score: 412.9 bits (1060), Expect = 9.2e-112
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 77  HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYD 136
           HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYD
Sbjct: 77  HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYD 136

Query: 137 WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXX 196
           WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXX
Sbjct: 137 WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXX 196

Query: 197 XXXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEE 256
           XXXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEE
Sbjct: 197 XXXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEE 256

Query: 257 SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPNNPLN 302
           SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPNNPLN
Sbjct: 257 SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPNNPLN 301

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BLAST of CsaV3_5G027460 vs. NCBI nr
Match: XP_008460585.1 (PREDICTED: zinc-finger homeodomain protein 4 [Cucumis melo])

HSP 1 Score: 395.6 bits (1015), Expect = 1.5e-106
Identity = 215/225 (95.56%), Postives = 216/225 (96.00%), Query Frame = 0


Query: 77  HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYD 136
           HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTC ACNCHRNFHRKEIEGEPYD
Sbjct: 74  HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYD 133

Query: 137 WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXX 196
           WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPH     XXXXXXX
Sbjct: 134 WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHXXXXXXXXXXXX 193

Query: 197 XXXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEE 256
           XXXXXXXXXXXXXX  VGGRVYSGAMMNKKRFRTKFT EQKEKMLRFAEKVGWKIQKQEE
Sbjct: 194 XXXXXXXXXXXXXXAGVGGRVYSGAMMNKKRFRTKFTTEQKEKMLRFAEKVGWKIQKQEE 253

Query: 257 SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPNNPLN 302
           SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKK+TMSPSHSPNNPLN
Sbjct: 254 SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKETMSPSHSPNNPLN 298

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BLAST of CsaV3_5G027460 vs. NCBI nr
Match: XP_022998407.1 (zinc-finger homeodomain protein 4-like [Cucurbita maxima])

HSP 1 Score: 350.5 bits (898), Expect = 5.6e-93
Identity = 186/219 (84.93%), Postives = 190/219 (86.76%), Query Frame = 0


Query: 78  IKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYDW 137
           +KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTC ACNCHRNFHRKEIEGEPYDW
Sbjct: 83  VKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYDW 142

Query: 138 LHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXXX 197
           LHH RLGRKLLVGGKNMI PPE AAFAYP+A G  FISSRA   QPHHMIMS        
Sbjct: 143 LHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGPAFISSRA---QPHHMIMS-------Y 202

Query: 198 XXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEES 257
               XXXXXXXXXXX   R YSG MMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEES
Sbjct: 203 NMLGXXXXXXXXXXXXXXRAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEES 262

Query: 258 VVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSP 297
           VVQQFC+EIGVKRRVLKVWMHNNKHNL KKDT+SP HSP
Sbjct: 263 VVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPPHSP 291

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BLAST of CsaV3_5G027460 vs. NCBI nr
Match: XP_022933078.1 (zinc-finger homeodomain protein 3-like [Cucurbita moschata])

HSP 1 Score: 349.7 bits (896), Expect = 9.6e-93
Identity = 185/219 (84.47%), Postives = 190/219 (86.76%), Query Frame = 0


Query: 78  IKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYDW 137
           +KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTC ACNCHRNFHRKEIEGEPYDW
Sbjct: 81  VKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYDW 140

Query: 138 LHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXXX 197
           LHH RLGRKLLVGGKNMI PPE AAFAYP+A G  FISSRA   QPHHMIMS        
Sbjct: 141 LHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGPAFISSRA---QPHHMIMS-------Y 200

Query: 198 XXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEES 257
               XXXXXXXXXXX   R YSG MMNKKRFRTKFTAEQKEKMLRFAEKVGWK+QKQEES
Sbjct: 201 NMLGXXXXXXXXXXXXXXRAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKLQKQEES 260

Query: 258 VVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSP 297
           VVQQFC+EIGVKRRVLKVWMHNNKHNL KKDT+SP HSP
Sbjct: 261 VVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPPHSP 289

[Close]

BLAST of CsaV3_5G027460 vs. NCBI nr
Match: XP_023530544.1 (zinc-finger homeodomain protein 4-like [Cucurbita pepo subsp. pepo] >AXF54222.1 ZFP2 [Cucurbita pepo])

HSP 1 Score: 347.8 bits (891), Expect = 3.7e-92
Identity = 185/218 (84.86%), Postives = 188/218 (86.24%), Query Frame = 0


Query: 79  KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYDWL 138
           KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTC ACNCHRNFHRKEIEGEPYDWL
Sbjct: 83  KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYDWL 142

Query: 139 HHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXXXX 198
           HH RLGRKLLVGGKNMI PPE AAFAYP+  G  FISSRA   QPHHMIMS         
Sbjct: 143 HHPRLGRKLLVGGKNMIAPPEAAAFAYPSVAGPAFISSRA---QPHHMIMS-------YN 202

Query: 199 XXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESV 258
              XXXXXXXXXXX   R YSG MMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESV
Sbjct: 203 MLGXXXXXXXXXXXXXXRAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESV 262

Query: 259 VQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSP 297
           VQQFC+EIGVKRRVLKVWMHNNKHNL KKDT+SP HSP
Sbjct: 263 VQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPPHSP 290

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BLAST of CsaV3_5G027460 vs. TAIR10
Match: AT1G14440.1 (homeobox protein 31)

HSP 1 Score: 208.0 bits (528), Expect = 8.2e-54
Identity = 120/234 (51.28%), Postives = 138/234 (58.97%), Query Frame = 0


Query: 78  IKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGE---- 137
           IKYKECLKNHAA+MGGNATDGCGEFMPSGE+GSIEALTC ACNCHRNFHRKE+EGE    
Sbjct: 88  IKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAAT 147

Query: 138 ---PYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSX 197
              PY   H     RKL++                           +  +  PH MIM  
Sbjct: 148 AMSPY---HQHPPHRKLMLN------------------------HQKIRSAMPHQMIMPI 207

Query: 198 XXXXXXXXXXXXXXXXXXXXXXV--GGRVYSGAMMN-KKRFRTKFTAEQKEKMLRFAEKV 257
                                 V    R       N KKRFRTKFT EQKEKML FAEKV
Sbjct: 208 GVSNYRYMHNNSESEDFMEEDGVTTASRSLPNLPYNQKKRFRTKFTPEQKEKMLSFAEKV 267

Query: 258 GWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPNNPLN 302
           GWKIQ+QE+ VVQ+FC+EIGVKRRVLKVWMHNNK + +KK+ ++   + N  +N
Sbjct: 268 GWKIQRQEDCVVQRFCEEIGVKRRVLKVWMHNNKIHFSKKNNINLEDNDNEKIN 294

[Close]

BLAST of CsaV3_5G027460 vs. TAIR10
Match: AT2G02540.1 (homeobox protein 21)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-47
Identity = 128/210 (60.95%), Postives = 137/210 (65.24%), Query Frame = 0


Query: 78  IKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYDW 137
           IKYKECLKNHAA+MGGNA DGCGEFMPSGEEGSIEALTC  CNCHRNFHR+E EGE    
Sbjct: 85  IKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEE--- 144

Query: 138 LHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXXX 197
                  +                                            XXXXXXXX
Sbjct: 145 -------KTFFSPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 204

Query: 198 XXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEES 257
           XXXXXXXXXXXXXXX     YS     KKRFRTKFT EQKEKM+ FAE+VGWKIQ+QEES
Sbjct: 205 XXXXXXXXXXXXXXXXXXXXYSYGHNQKKRFRTKFTQEQKEKMISFAERVGWKIQRQEES 264

Query: 258 VVQQFCQEIGVKRRVLKVWMHNNKHNLAKK 288
           VVQQ CQEIG++RRVLKVWMHNNK NL+KK
Sbjct: 265 VVQQLCQEIGIRRRVLKVWMHNNKQNLSKK 284

[Close]

BLAST of CsaV3_5G027460 vs. TAIR10
Match: AT4G24660.1 (homeobox protein 22)

HSP 1 Score: 161.4 bits (407), Expect = 8.8e-40
Identity = 98/210 (46.67%), Postives = 124/210 (59.05%), Query Frame = 0


Query: 78  IKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYDW 137
           I+Y+ECLKNHA ++GG+A DGC EFMPSGE+G+++AL C AC CHRNFHRKE E      
Sbjct: 47  IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES----- 106

Query: 138 LHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXXX 197
                +G +          PP+P         G   ++S AA  +P              
Sbjct: 107 -----IGGRAHRVPTYYNRPPQP-----HQPPGYLHLTSPAAPYRP-------------- 166

Query: 198 XXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEES 257
                   XXXXXXX             KRFRTKFTAEQKEKML FAE++GW+IQK ++ 
Sbjct: 167 --------XXXXXXXXXXXXXXXXXXXXKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDV 219

Query: 258 VVQQFCQEIGVKRRVLKVWMHNNKHNLAKK 288
            V+QFC E GV+R+VLK+WMHNNK++L KK
Sbjct: 227 AVEQFCAETGVRRQVLKIWMHNNKNSLGKK 219

[Close]

BLAST of CsaV3_5G027460 vs. TAIR10
Match: AT2G18350.1 (homeobox protein 24)

HSP 1 Score: 154.8 bits (390), Expect = 8.2e-38
Identity = 88/210 (41.90%), Postives = 115/210 (54.76%), Query Frame = 0


Query: 79  KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYDWL 138
           +Y+EC KNHAAS GG+  DGCGEFM SGEEG++E+L C AC+CHR+FHRKEI+G     +
Sbjct: 81  RYRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDG--LFVV 140

Query: 139 HHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXXXX 198
           + +  G      G   + P         + GG    ++ ++T   +    S         
Sbjct: 141 NFNSFGHSQRPLGSRHVSP------IMMSFGGXXXCAAESSTEDLNKFHQSFSGY----- 200

Query: 199 XXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESV 258
                           G         KKRFRTKF  EQKEKM+ FAEK+GW++ K E+  
Sbjct: 201 ----------------GVDQFHHYQPKKRFRTKFNEEQKEKMMEFAEKIGWRMTKLEDDE 260

Query: 259 VQQFCQEIGVKRRVLKVWMHNNKHNLAKKD 289
           V +FC+EI VKR+V KVWMHNNK    KKD
Sbjct: 261 VNRFCREIKVKRQVFKVWMHNNKQAAKKKD 261

[Close]

BLAST of CsaV3_5G027460 vs. TAIR10
Match: AT5G65410.1 (homeobox protein 25)

HSP 1 Score: 145.2 bits (365), Expect = 6.5e-35
Identity = 84/216 (38.89%), Postives = 110/216 (50.93%), Query Frame = 0


Query: 79  KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYDWL 138
           +++ECLKN A ++GG+A DGCGEFMP+G EG+I+AL C AC CHRNFHRKE+   PY   
Sbjct: 74  RFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKEL---PYXXX 133

Query: 139 HHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXXXX 198
                                                           + +         
Sbjct: 134 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMET--------- 193

Query: 199 XXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESV 258
                          GG +       +KR RTKFTAEQKE+ML  AE++GW+IQ+Q++ V
Sbjct: 194 ----------SSAEAGGGI-------RKRHRTKFTAEQKERMLALAERIGWRIQRQDDEV 253

Query: 259 VQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSH 295
           +Q+FCQE GV R+VLKVW+HNNKH L K  + SP H
Sbjct: 254 IQRFCQETGVPRQVLKVWLHNNKHTLGK--SPSPLH 258

[Close]

BLAST of CsaV3_5G027460 vs. Swiss-Prot
Match: sp|Q9M9S0|ZHD4_ARATH (Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZHD4 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-52
Identity = 120/234 (51.28%), Postives = 138/234 (58.97%), Query Frame = 0


Query: 78  IKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGE---- 137
           IKYKECLKNHAA+MGGNATDGCGEFMPSGE+GSIEALTC ACNCHRNFHRKE+EGE    
Sbjct: 88  IKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAAT 147

Query: 138 ---PYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSX 197
              PY   H     RKL++                           +  +  PH MIM  
Sbjct: 148 AMSPY---HQHPPHRKLMLN------------------------HQKIRSAMPHQMIMPI 207

Query: 198 XXXXXXXXXXXXXXXXXXXXXXV--GGRVYSGAMMN-KKRFRTKFTAEQKEKMLRFAEKV 257
                                 V    R       N KKRFRTKFT EQKEKML FAEKV
Sbjct: 208 GVSNYRYMHNNSESEDFMEEDGVTTASRSLPNLPYNQKKRFRTKFTPEQKEKMLSFAEKV 267

Query: 258 GWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPNNPLN 302
           GWKIQ+QE+ VVQ+FC+EIGVKRRVLKVWMHNNK + +KK+ ++   + N  +N
Sbjct: 268 GWKIQRQEDCVVQRFCEEIGVKRRVLKVWMHNNKIHFSKKNNINLEDNDNEKIN 294

[Close]

BLAST of CsaV3_5G027460 vs. Swiss-Prot
Match: sp|O64722|ZHD3_ARATH (Zinc-finger homeodomain protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZHD3 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.1e-46
Identity = 128/210 (60.95%), Postives = 137/210 (65.24%), Query Frame = 0


Query: 78  IKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYDW 137
           IKYKECLKNHAA+MGGNA DGCGEFMPSGEEGSIEALTC  CNCHRNFHR+E EGE    
Sbjct: 85  IKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEE--- 144

Query: 138 LHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXXX 197
                  +                                            XXXXXXXX
Sbjct: 145 -------KTFFSPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 204

Query: 198 XXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEES 257
           XXXXXXXXXXXXXXX     YS     KKRFRTKFT EQKEKM+ FAE+VGWKIQ+QEES
Sbjct: 205 XXXXXXXXXXXXXXXXXXXXYSYGHNQKKRFRTKFTQEQKEKMISFAERVGWKIQRQEES 264

Query: 258 VVQQFCQEIGVKRRVLKVWMHNNKHNLAKK 288
           VVQQ CQEIG++RRVLKVWMHNNK NL+KK
Sbjct: 265 VVQQLCQEIGIRRRVLKVWMHNNKQNLSKK 284

[Close]

BLAST of CsaV3_5G027460 vs. Swiss-Prot
Match: sp|A2Z259|ZHD1_ORYSI (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD1 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.4e-41
Identity = 97/222 (43.69%), Postives = 114/222 (51.35%), Query Frame = 0


Query: 79  KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIE---GE-- 138
           +Y+ECLKNHA  +GG+A DGCGEFM +GEEG+I+AL C ACNCHRNFHRKE E   GE  
Sbjct: 56  RYRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESESLAGEGS 115

Query: 139 --------PYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHH 198
                   PY    H +           +                      +     P  
Sbjct: 116 PFSPAAVVPYGATPHHQFSPYYRTPAGYLXXXXXXXXXXXXXXXXXXXXXPQRPLALPST 175

Query: 199 MIMSXXXXXXXXXXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAE 258
                                        G   SG+   KKRFRTKFT EQK+KML FAE
Sbjct: 176 SHSGRDDGDDLSGMVGPMSAVGPLSGMSLGAGPSGSGSGKKRFRTKFTQEQKDKMLAFAE 235

Query: 259 KVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKK 288
           +VGW+IQK +E+ VQQFC E+GVKR VLKVWMHNNKH L KK
Sbjct: 236 RVGWRIQKHDEAAVQQFCDEVGVKRHVLKVWMHNNKHTLGKK 277

[Close]

BLAST of CsaV3_5G027460 vs. Swiss-Prot
Match: sp|Q6YXH5|ZHD1_ORYSJ (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD1 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 4.5e-41
Identity = 97/222 (43.69%), Postives = 114/222 (51.35%), Query Frame = 0


Query: 79  KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIE---GE-- 138
           +Y+ECLKNHA  +GG+A DGCGEFM +GEEG+I+AL C ACNCHRNFHRKE E   GE  
Sbjct: 56  RYRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESESLAGEGS 115

Query: 139 --------PYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHH 198
                   PY    H +           +                      +     P  
Sbjct: 116 PFSPAAVVPYGATPHHQFSPYYRTPAGYLXXXXXXXXXXXXXXXXXXXXYPQRPLALPST 175

Query: 199 MIMSXXXXXXXXXXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAE 258
                                        G   SG+   KKRFRTKFT EQK+KML FAE
Sbjct: 176 SHSGRDDGDDLSGMVGPMSAVGPLSGMSLGAGPSGSGSGKKRFRTKFTQEQKDKMLAFAE 235

Query: 259 KVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKK 288
           +VGW+IQK +E+ VQQFC E+GVKR VLKVWMHNNKH L KK
Sbjct: 236 RVGWRIQKHDEAAVQQFCDEVGVKRHVLKVWMHNNKHTLGKK 277

[Close]

BLAST of CsaV3_5G027460 vs. Swiss-Prot
Match: sp|A2YWA6|ZHD2_ORYSI (Zinc-finger homeodomain protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD2 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39
Identity = 103/253 (40.71%), Postives = 122/253 (48.22%), Query Frame = 0


Query: 80  YKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYDWLH 139
           Y+ECLKNHA  +GG+A DGCGEFM SGEEGSI+AL C AC CHRNFHRKE E        
Sbjct: 63  YRECLKNHAVGIGGHAVDGCGEFMASGEEGSIDALRCAACGCHRNFHRKESE-------- 122

Query: 140 HSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMI------------ 199
                          +GP EP+A + P A     IS+  A+  PHH              
Sbjct: 123 -----------SPTGVGPAEPSAVS-PAA-----ISAYGAS--PHHQFSPYYRTPAGYLX 182

Query: 200 ---------------------------------MSXXXXXXXXXXXXXXXXXXXXXXXVG 259
                                                                     +G
Sbjct: 183 XXXXXXXXXXXXXXXXXXXXYPQRPLALPSTSHSGRDEGDDMSGMVGPMVIGPMVGMSLG 242

Query: 260 GRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLK 288
               SG+   KKRFRTKFT EQK+KML FAE++GW+IQK +E+ VQQFC+E+ VKR VLK
Sbjct: 243 SAGPSGSGSGKKRFRTKFTQEQKDKMLAFAERLGWRIQKHDEAAVQQFCEEVCVKRHVLK 288

[Close]

BLAST of CsaV3_5G027460 vs. TrEMBL
Match: tr|A0A0A0KSI7|A0A0A0KSI7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G527900 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 6.1e-112
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 77  HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYD 136
           HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYD
Sbjct: 77  HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYD 136

Query: 137 WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXX 196
           WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXX
Sbjct: 137 WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXX 196

Query: 197 XXXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEE 256
           XXXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEE
Sbjct: 197 XXXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEE 256

Query: 257 SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPNNPLN 302
           SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPNNPLN
Sbjct: 257 SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPNNPLN 301

[Close]

BLAST of CsaV3_5G027460 vs. TrEMBL
Match: tr|A0A1S3CCS9|A0A1S3CCS9_CUCME (zinc-finger homeodomain protein 4 OS=Cucumis melo OX=3656 GN=LOC103499371 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.0e-106
Identity = 215/225 (95.56%), Postives = 216/225 (96.00%), Query Frame = 0


Query: 77  HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYD 136
           HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTC ACNCHRNFHRKEIEGEPYD
Sbjct: 74  HIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYD 133

Query: 137 WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIMSXXXXXXX 196
           WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPH     XXXXXXX
Sbjct: 134 WLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHXXXXXXXXXXXX 193

Query: 197 XXXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEE 256
           XXXXXXXXXXXXXX  VGGRVYSGAMMNKKRFRTKFT EQKEKMLRFAEKVGWKIQKQEE
Sbjct: 194 XXXXXXXXXXXXXXAGVGGRVYSGAMMNKKRFRTKFTTEQKEKMLRFAEKVGWKIQKQEE 253

Query: 257 SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPNNPLN 302
           SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKK+TMSPSHSPNNPLN
Sbjct: 254 SVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKETMSPSHSPNNPLN 298

[Close]

BLAST of CsaV3_5G027460 vs. TrEMBL
Match: tr|A0A061GFH0|A0A061GFH0_THECC (Homeobox protein 31 OS=Theobroma cacao OX=3641 GN=TCM_027142 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.7e-66
Identity = 140/220 (63.64%), Postives = 149/220 (67.73%), Query Frame = 0


Query: 78  IKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGEPYDW 137
           ++Y+ECLKNHAA+MGGNATDGCGEFMPSGEEGSIEALTC ACNCHRNFHRKEIEGEP   
Sbjct: 67  VRYRECLKNHAAAMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPSPS 126

Query: 138 L---------HHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSRAATTQPHHMIM 197
                     H SR GRKL +G    I PPE     YPTA G    S  A T  PH MIM
Sbjct: 127 SCDCYPSHSPHLSRAGRKLFLGHHKSILPPEALGLGYPTATGTLIHSRAAPTPTPHQMIM 186

Query: 198 SXXXXXXXXXXXXXXXXXXXXXXXVGGRVYSGAMMNKKRFRTKFTAEQKEKMLRFAEKVG 257
           S                        GG V     + KKRFRTKFT EQKEKML FA+KVG
Sbjct: 187 SYNMGSLPSESDDQADG--------GGVVTRPHQLVKKRFRTKFTQEQKEKMLNFADKVG 246

Query: 258 WKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKD 289
           WKIQKQEE+VVQQFCQEIGVKRRVLKVWMHNNKHNLAKK+
Sbjct: 247 WKIQKQEEAVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKN 278

[Close]

BLAST of CsaV3_5G027460 vs. TrEMBL
Match: tr|V4SV99|V4SV99_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003702mg PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.3e-66
Identity = 145/240 (60.42%), Postives = 160/240 (66.67%), Query Frame = 0


Query: 78  IKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGE---- 137
           +KYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEALTC ACNCHRNFHRKEIEGE    
Sbjct: 82  VKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEALTCSACNCHRNFHRKEIEGEQQQQ 141

Query: 138 ----PYDWLHH------SRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSR--AATT 197
               P+D+ HH      +R+GRK+++G    I    P A  YPT  G T ISSR      
Sbjct: 142 AAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATPEALGYPTPTG-TLISSRPVGGGP 201

Query: 198 QPHHMIMSXXXXXXXXXXXXXXXXXXXXXXXVGGRVYSG----AMMNKKRFRTKFTAEQK 257
            PH MIMS                       +GG V       A + KKRFRTKFT EQK
Sbjct: 202 TPHQMIMS-------YNMGSIPSESDEHEDGIGGGVVMAARPTAQLVKKRFRTKFTQEQK 261

Query: 258 EKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPN 298
           EKM  FAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKK+ ++P  + N
Sbjct: 262 EKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKNNINPPSTTN 313

[Close]

BLAST of CsaV3_5G027460 vs. TrEMBL
Match: tr|A0A2H5QA39|A0A2H5QA39_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_210480 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.3e-66
Identity = 145/240 (60.42%), Postives = 160/240 (66.67%), Query Frame = 0


Query: 78  IKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCLACNCHRNFHRKEIEGE---- 137
           +KYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEALTC ACNCHRNFHRKEIEGE    
Sbjct: 82  VKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEALTCSACNCHRNFHRKEIEGEQQQQ 141

Query: 138 ----PYDWLHH------SRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATFISSR--AATT 197
               P+D+ HH      +R+GRK+++G    I    P A  YPT  G T ISSR      
Sbjct: 142 AAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATPEALGYPTPTG-TLISSRPVGGGP 201

Query: 198 QPHHMIMSXXXXXXXXXXXXXXXXXXXXXXXVGGRVYSG----AMMNKKRFRTKFTAEQK 257
            PH MIMS                       +GG V       A + KKRFRTKFT EQK
Sbjct: 202 TPHQMIMS-------YNMGSIPSESDEHEDGIGGGVVMAARPTAQLVKKRFRTKFTQEQK 261

Query: 258 EKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDTMSPSHSPN 298
           EKM  FAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKK+ ++P  + N
Sbjct: 262 EKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKNNINPPSTTN 313

The following BLAST results are available for this feature:

BLAST of CsaV3_5G027460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142854.1	9.2e-112	100.00	PREDICTED: zinc-finger homeodomain protein 4 [Cucumis sativus] >KGN51402.1 hypot...	[more]
XP_008460585.1	1.5e-106	95.56	PREDICTED: zinc-finger homeodomain protein 4 [Cucumis melo]	[more]
XP_022998407.1	5.6e-93	84.93	zinc-finger homeodomain protein 4-like [Cucurbita maxima]	[more]
XP_022933078.1	9.6e-93	84.47	zinc-finger homeodomain protein 3-like [Cucurbita moschata]	[more]
XP_023530544.1	3.7e-92	84.86	zinc-finger homeodomain protein 4-like [Cucurbita pepo subsp. pepo] >AXF54222.1 ...	[more]

BLAST of CsaV3_5G027460 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14440.1	8.2e-54	51.28	homeobox protein 31	[more]
AT2G02540.1	1.1e-47	60.95	homeobox protein 21	[more]
AT4G24660.1	8.8e-40	46.67	homeobox protein 22	[more]
AT2G18350.1	8.2e-38	41.90	homeobox protein 24	[more]
AT5G65410.1	6.5e-35	38.89	homeobox protein 25	[more]

BLAST of CsaV3_5G027460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M9S0\|ZHD4_ARATH	1.5e-52	51.28	Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZHD4 PE=1 S...	[more]
sp\|O64722\|ZHD3_ARATH	2.1e-46	60.95	Zinc-finger homeodomain protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZHD3 PE=1 S...	[more]
sp\|A2Z259\|ZHD1_ORYSI	3.4e-41	43.69	Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD1...	[more]
sp\|Q6YXH5\|ZHD1_ORYSJ	4.5e-41	43.69	Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZH...	[more]
sp\|A2YWA6\|ZHD2_ORYSI	1.9e-39	40.71	Zinc-finger homeodomain protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD2...	[more]

BLAST of CsaV3_5G027460 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KSI7\|A0A0A0KSI7_CUCSA	6.1e-112	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G527900 PE=4 SV=1	[more]
tr\|A0A1S3CCS9\|A0A1S3CCS9_CUCME	1.0e-106	95.56	zinc-finger homeodomain protein 4 OS=Cucumis melo OX=3656 GN=LOC103499371 PE=4 S...	[more]
tr\|A0A061GFH0\|A0A061GFH0_THECC	1.7e-66	63.64	Homeobox protein 31 OS=Theobroma cacao OX=3641 GN=TCM_027142 PE=4 SV=1	[more]
tr\|V4SV99\|V4SV99_9ROSI	2.3e-66	60.42	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003702mg PE=4 ...	[more]
tr\|A0A2H5QA39\|A0A2H5QA39_CITUN	2.3e-66	60.42	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_210480 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR006456	ZF_HD_homeobox_Cys/His_dimer
IPR006455	Homeodomain_ZF_HD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G027460.1	CsaV3_5G027460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006455	Homeodomain, ZF-HD class	TIGRFAM	TIGR01565	TIGR01565	coord: 225..281 e-value: 8.6E-28 score: 94.1
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 78..130 e-value: 7.3E-29 score: 99.8
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 79..130 e-value: 2.2E-31 score: 106.0
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PRODOM	PD125774		coord: 82..133 e-value: 3.0E-23 score: 270.0
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 80..129 score: 27.172
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 200..286 e-value: 7.8E-33 score: 114.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..44
None	No IPR available	PANTHER	PTHR31948:SF19	ZINC-FINGER HOMEODOMAIN PROTEIN 3-RELATED	coord: 33..294
None	No IPR available	PANTHER	PTHR31948	FAMILY NOT NAMED	coord: 33..294
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 218..286

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G027460	CSPI05G18630	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G027460	Cucsa.011620	Cucumber (Gy14) v1	cgycucB300
CsaV3_5G027460	CmaCh04G018950	Cucurbita maxima (Rimu)	cmacucB0898
CsaV3_5G027460	CmoCh04G019970	Cucurbita moschata (Rifu)	cmocucB0892
CsaV3_5G027460	Cp4.1LG01g17110	Cucurbita pepo (Zucchini)	cpecucB0560
CsaV3_5G027460	CsGy5G018220	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G027460	Carg26173	Silver-seed gourd	carcucB0311
CsaV3_5G027460	Cla001881	Watermelon (97103) v1	cucwmB460
CsaV3_5G027460	MELO3C022921	Melon (DHL92) v3.5.1	cucmeB384
CsaV3_5G027460	ClCG00G002090	Watermelon (Charleston Gray)	cucwcgB360
CsaV3_5G027460	ClCG11G000100	Watermelon (Charleston Gray)	cucwcgB381
CsaV3_5G027460	Lsi11G001010	Bottle gourd (USVL1VR-Ls)	cuclsiB361
CsaV3_5G027460	MELO3C022921.2	Melon (DHL92) v3.6.1	cucmedB378
CsaV3_5G027460	Cla97C11G206460	Watermelon (97103) v2	cucwmbB379
CsaV3_5G027460	BhiUN159G31	Wax gourd	cucwgoB504

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None