CmaCh04G018950.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G018950.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Zinc finger-homeodomain protein 2
Location	Cma_Chr04 : 9889176 .. 9890063 (+)
Sequence length	888

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCACTACTCAAGATCATCCCATTCCCATTCCCATCCCTTTAAATAGTCGCTACGTTGGCCACGGCCACGACCACGACCATGTCATCCATCACCATGACCCGTCTGCCGCCTGCAACCATATCATCGCGGCGGCAGTCAATGGCGGCAGCCCACTTCCATCTTCTCAGATGGAAGTCGAGCTTCACCACAATCATAATAACAACAGCAACAACAATAACAACAACAACACGAAGAAGCAAGTAAAATATAAAGAGTGTCTCAAAAACCATGCGGCCTCCATGGGAGGTAATGCCACGGATGGGTGTGGCGAGTTCATGCCGAGTGGAGAAGAAGGATCCATTGAAGCCCTCACGTGTTCGGCTTGCAATTGTCATAGAAACTTCCATCGAAAAGAGATCGAGGGAGAACCCTACGACTGGCTCCACCATCCTCGCCTTGGGAGGAAGCTCCTCGTCGGAGGGAAGAACATGATCGCCCCACCAGAGGCAGCTGCATTTGCGTATCCATCGGCGGCGGGGCCGGCATTCATATCATCTAGAGCACAACCCCACCATATGATAATGTCGTACAACATGCTCGGCGGGGGAGGTGGGCAGTCAGAGTCAGAGGAGCACGAGGAGGCGAGGGCGTACTCGGGGCCAATGATGAACAAGAAGCGATTCCGAACAAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAGAAACAAGAGGAGAGTGTGGTGCAGCAATTCTGTGAAGAGATTGGAGTGAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAATAAGCACAATCTTGGGAAGAAGGATACCATTTCTCCTCCCCATTCTCCTACTCCCTTAACTTAA

mRNA sequence

ATGGAGCTCACTACTCAAGATCATCCCATTCCCATTCCCATCCCTTTAAATAGTCGCTACGTTGGCCACGGCCACGACCACGACCATGTCATCCATCACCATGACCCGTCTGCCGCCTGCAACCATATCATCGCGGCGGCAGTCAATGGCGGCAGCCCACTTCCATCTTCTCAGATGGAAGTCGAGCTTCACCACAATCATAATAACAACAGCAACAACAATAACAACAACAACACGAAGAAGCAAGTAAAATATAAAGAGTGTCTCAAAAACCATGCGGCCTCCATGGGAGGTAATGCCACGGATGGGTGTGGCGAGTTCATGCCGAGTGGAGAAGAAGGATCCATTGAAGCCCTCACGTGTTCGGCTTGCAATTGTCATAGAAACTTCCATCGAAAAGAGATCGAGGGAGAACCCTACGACTGGCTCCACCATCCTCGCCTTGGGAGGAAGCTCCTCGTCGGAGGGAAGAACATGATCGCCCCACCAGAGGCAGCTGCATTTGCGTATCCATCGGCGGCGGGGCCGGCATTCATATCATCTAGAGCACAACCCCACCATATGATAATGTCGTACAACATGCTCGGCGGGGGAGGTGGGCAGTCAGAGTCAGAGGAGCACGAGGAGGCGAGGGCGTACTCGGGGCCAATGATGAACAAGAAGCGATTCCGAACAAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAGAAACAAGAGGAGAGTGTGGTGCAGCAATTCTGTGAAGAGATTGGAGTGAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAATAAGCACAATCTTGGGAAGAAGGATACCATTTCTCCTCCCCATTCTCCTACTCCCTTAACTTAA

Coding sequence (CDS)

ATGGAGCTCACTACTCAAGATCATCCCATTCCCATTCCCATCCCTTTAAATAGTCGCTACGTTGGCCACGGCCACGACCACGACCATGTCATCCATCACCATGACCCGTCTGCCGCCTGCAACCATATCATCGCGGCGGCAGTCAATGGCGGCAGCCCACTTCCATCTTCTCAGATGGAAGTCGAGCTTCACCACAATCATAATAACAACAGCAACAACAATAACAACAACAACACGAAGAAGCAAGTAAAATATAAAGAGTGTCTCAAAAACCATGCGGCCTCCATGGGAGGTAATGCCACGGATGGGTGTGGCGAGTTCATGCCGAGTGGAGAAGAAGGATCCATTGAAGCCCTCACGTGTTCGGCTTGCAATTGTCATAGAAACTTCCATCGAAAAGAGATCGAGGGAGAACCCTACGACTGGCTCCACCATCCTCGCCTTGGGAGGAAGCTCCTCGTCGGAGGGAAGAACATGATCGCCCCACCAGAGGCAGCTGCATTTGCGTATCCATCGGCGGCGGGGCCGGCATTCATATCATCTAGAGCACAACCCCACCATATGATAATGTCGTACAACATGCTCGGCGGGGGAGGTGGGCAGTCAGAGTCAGAGGAGCACGAGGAGGCGAGGGCGTACTCGGGGCCAATGATGAACAAGAAGCGATTCCGAACAAAGTTCACGGCGGAGCAAAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAGAAACAAGAGGAGAGTGTGGTGCAGCAATTCTGTGAAGAGATTGGAGTGAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAATAAGCACAATCTTGGGAAGAAGGATACCATTTCTCCTCCCCATTCTCCTACTCCCTTAACTTAA

Protein sequence

MELTTQDHPIPIPIPLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQMEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGPAFISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPPHSPTPLT

Homology

[Close]

BLAST of CmaCh04G018950.1 vs. Swiss-Prot
Match: ZHD4_ARATH (Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana GN=ZHD4 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-60
Identity = 153/315 (48.57%), Postives = 186/315 (59.05%), Query Frame = 1


Query: 1   MELTTQ-DHPIPIPIPLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           ME+ +Q DH +PIP  LN+ + G G  H H+IHHHD  AA N       N  +  P    
Sbjct: 1   MEIASQEDHDMPIP--LNTTF-GGGGSHGHMIHHHDHHAA-NSAPPTHNNNNTTQPPP-- 60

Query: 61  EVELHHN-HNNNSNNNNNNNT----------KKQVKYKECLKNHAASMGGNATDGCGEFM 120
            + LH N H NN +++++ +           K  +KYKECLKNHAA+MGGNATDGCGEFM
Sbjct: 61  -MPLHGNGHGNNYDHHHHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFM 120

Query: 121 PSGEEGSIEALTCSACNCHRNFHRKEIEGE-------PYDWLHHPRLGRKLLVGGKNMIA 180
           PSGE+GSIEALTCSACNCHRNFHRKE+EGE       PY   H     RKL++  + +  
Sbjct: 121 PSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAMSPY---HQHPPHRKLMLNHQKI-- 180

Query: 181 PPEAAAFAYPSAAGPAFISSRAQPHHMIM-----SYNMLGGGGGQSESEEHEEARAYSGP 240
                                A PH MIM     +Y  +       +  E +     S  
Sbjct: 181 -------------------RSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRS 240

Query: 241 MMN-----KKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVW 287
           + N     KKRFRTKFT EQKEKML FAEKVGWKIQ+QE+ VVQ+FCEEIGVKRRVLKVW
Sbjct: 241 LPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVW 284

[Close]

BLAST of CmaCh04G018950.1 vs. Swiss-Prot
Match: ZHD3_ARATH (Zinc-finger homeodomain protein 3 OS=Arabidopsis thaliana GN=ZHD3 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.0e-58
Identity = 144/297 (48.48%), Postives = 179/297 (60.27%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQME 60
           ME+ +Q+ PIPI    N+ Y   G  H ++ HHH  ++A + +     N   PL  S   
Sbjct: 1   MEIASQEDPIPI----NTSYGNSGGGHGNMNHHHHANSAPSSLNITTSN---PLLVSSNS 60

Query: 61  VELHHNHNNNSNNNNN-----NNTKKQ----VKYKECLKNHAASMGGNATDGCGEFMPSG 120
             L  NH+++ +++        N KK+    +KYKECLKNHAA+MGGNA DGCGEFMPSG
Sbjct: 61  NGLGKNHDHSHHHHVGYNIMVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSG 120

Query: 121 EEGSIEALTCSACNCHRNFHRKEIEGE------PYDWLHHPRLGRKLLVGGKNMIAPPEA 180
           EEGSIEALTCS CNCHRNFHR+E EGE      PY   H P   ++ L+    MI  P  
Sbjct: 121 EEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNHHQPPPQQRKLMFHHKMIKSPLP 180

Query: 181 AAFAYPSAAGPAFISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRT 240
                P     A  +S ++    +M      GGG  +  +       YS     KKRFRT
Sbjct: 181 QQMIMPIGVTTAGSNSESED---LMEEE---GGGSLTFRQPPPPPSPYSYGHNQKKRFRT 240

Query: 241 KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKK 283
           KFT EQKEKM+ FAE+VGWKIQ+QEESVVQQ C+EIG++RRVLKVWMHNNK NL KK
Sbjct: 241 KFTQEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIRRRVLKVWMHNNKQNLSKK 284

[Close]

BLAST of CmaCh04G018950.1 vs. Swiss-Prot
Match: ZHD4_ORYSJ (Zinc-finger homeodomain protein 4 OS=Oryza sativa subsp. japonica GN=ZHD4 PE=2 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-53
Identity = 123/241 (51.04%), Postives = 143/241 (59.34%), Query Frame = 1


Query: 83  VKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIE------ 142
           VKY+ECLKNHAA++GGNATDGCGEFMPSGEEGS+EAL CSAC CHRNFHRKE +      
Sbjct: 143 VKYRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKEADDLDADS 202

Query: 143 ---------GEPYDWL------HHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGPAFISS 202
                    G  +  L      HH + G  LLV G +      AAA A P    P     
Sbjct: 203 CAAALRAAAGRHHHLLGPALPHHHHKNGGGLLVAGGDPYGAAYAAARALPPPPPPP-PHG 262

Query: 203 RAQPHHMIMSYNML-----------GGGGGQSESEEHEEARAYSGPMMNKKRFRTKFTAE 262
               H +IM  NM+           GGGGG          R       +KKRFRTKFTAE
Sbjct: 263 HHHHHQIIMPLNMIHTSESDEMDVSGGGGGVG--------RGGGSSSSSKKRFRTKFTAE 322

Query: 263 QKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPPHS 292
           QK +ML FAE+VGW++QK ++++V  FC+EIGVKRRVLKVWMHNNKHNL KK   S P  
Sbjct: 323 QKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLKVWMHNNKHNLAKKPLPSSPPP 374

[Close]

BLAST of CmaCh04G018950.1 vs. Swiss-Prot
Match: ZHD3_ORYSJ (Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica GN=ZHD3 PE=3 SV=3)

HSP 1 Score: 189.5 bits (480), Expect = 5.2e-47
Identity = 126/315 (40.00%), Postives = 170/315 (53.97%), Query Frame = 1


Query: 1   MELTTQDHPIPIPI-PLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNG---GSPLPS 60
           M+L+     +P+P+    S Y+G  HDH H   HH             +NG     P P 
Sbjct: 1   MDLSGAQGELPLPMHAAASPYLGLHHDHHH---HHGGGGG-----GGGMNGRHMSPPTPP 60

Query: 61  SQMEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSI 120
           +  E        + +    +++     +Y+ECLKNHAA++GG+ATDGCGEFMP GEEGS+
Sbjct: 61  AAAE-------ESKAVVVVSSSATAAARYRECLKNHAAAIGGSATDGCGEFMPGGEEGSL 120

Query: 121 EALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGP 180
           +AL CSAC CHRNFHRKE++      LHH     +LL  G            A+P   G 
Sbjct: 121 DALRCSACGCHRNFHRKELDAAAAPPLHHHH--HQLLGVG------------AHPRGHGH 180

Query: 181 ----AFISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRTKFTAEQK 240
                 +++   P  M+M  + +        SE  + A    G    +KRFRTKFTAEQK
Sbjct: 181 HHHHLLVAALPPPTRMVMPLSAM------HTSESDDAAARPGGGAAARKRFRTKFTAEQK 240

Query: 241 EKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKK---------- 294
            +ML FAE+VGW++QK E++VVQ+FC+E+GVKRRVLKVWMHNNKH L ++          
Sbjct: 241 ARMLGFAEEVGWRLQKLEDAVVQRFCQEVGVKRRVLKVWMHNNKHTLARRHLHPSPAAAA 280

[Close]

BLAST of CmaCh04G018950.1 vs. Swiss-Prot
Match: ZHD5_ARATH (Zinc-finger homeodomain protein 5 OS=Arabidopsis thaliana GN=ZHD5 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.5e-43
Identity = 112/254 (44.09%), Postives = 143/254 (56.30%), Query Frame = 1


Query: 64  HHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSA 123
           HH   + S+ + +   K  V+Y+ECLKNHAAS+GG+  DGCGEFMPSGEEG+IEAL C+A
Sbjct: 55  HHQSKSPSSFSISAAAKPTVRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAA 114

Query: 124 CNCHRNFHRKEIEG---------EPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAA 183
           C+CHRNFHRKE++G           +   HH + G     GG     PP           
Sbjct: 115 CDCHRNFHRKEMDGVGSSDLISHHRHHHYHHNQYGG----GGGRRPPPPNMMLNPLMLPP 174

Query: 184 GPAFISSRAQPHHMI----------MSYNMLGGGGGQSESEEH---------EEARAYSG 243
            P +       + M           MS    GGGGG   S E          E A A +G
Sbjct: 175 PPNYQPIHHHKYGMSPPGGGGMVTPMSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAG 234

Query: 244 PM-----MNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKV 285
            M      +KKRFRTKFT +QKE+M+ FAEK+GW++ KQ+E  +++FC EIGVKR+V KV
Sbjct: 235 QMAFSMSSSKKRFRTKFTTDQKERMMDFAEKLGWRMNKQDEEELKRFCGEIGVKRQVFKV 294

[Close]

BLAST of CmaCh04G018950.1 vs. TrEMBL
Match: A0A0A0KSI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527900 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 6.9e-131
Identity = 245/307 (79.80%), Postives = 255/307 (83.06%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIP--LNSRYVGH----GHDHDHVIHHHDPSAACNHIIAAAVNGGSPL 60
           MELTT D PIPIPIP  LNSRY GH     HDHDH+IHHHD S+  NHII+A VNGG+  
Sbjct: 1   MELTTHDPPIPIPIPIPLNSRYAGHDHDHNHDHDHIIHHHDSSSTRNHIISATVNGGN-- 60

Query: 61  PSSQMEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEG 120
              QMEV+LHH+       NNNNN KK +KYKECLKNHAASMGGNATDGCGEFMPSGEEG
Sbjct: 61  ---QMEVDLHHH------TNNNNNNKKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEG 120

Query: 121 SIEALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAA 180
           SIEALTC ACNCHRNFHRKEIEGEPYDWLHH RLGRKLLVGGKNMI PPE AAFAYP+A 
Sbjct: 121 SIEALTCLACNCHRNFHRKEIEGEPYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAG 180

Query: 181 GPAFISSRA---QPHHMIMSYNMLGGGGGQSESEEHEE-------ARAYSGPMMNKKRFR 240
           G  FISSRA   QPHHMIMSYNMLGGGGG SESEE EE        R YSG MMNKKRFR
Sbjct: 181 GATFISSRAATTQPHHMIMSYNMLGGGGGHSESEEQEEGMGAGVGGRVYSGAMMNKKRFR 240

Query: 241 TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDT 292
           TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMHNNKHNL KKDT
Sbjct: 241 TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDT 296

[Close]

BLAST of CmaCh04G018950.1 vs. TrEMBL
Match: A0A067DTZ0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048741mg PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.1e-79
Identity = 182/319 (57.05%), Postives = 207/319 (64.89%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHD-HVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           MEL++QD  IPIPI  NS Y G GH H  H  HHH   A  ++II  A +     P +  
Sbjct: 1   MELSSQDGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPHDNIIPVASSAPQISPINGP 60

Query: 61  EVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120
            + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEAL
Sbjct: 61  PIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEAL 120

Query: 121 TCSACNCHRNFHRKEIEGE--------PYDWLHH------PRLGRKLLVGGKNMIAPPEA 180
           TCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I     
Sbjct: 121 TCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATP 180

Query: 181 AAFAYPSAAGPAFISSR-----AQPHHMIMSYNMLGGGGGQSESEEHEEA-------RAY 240
            A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+         A 
Sbjct: 181 EALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVMAAR 240

Query: 241 SGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMH 293
               + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMH
Sbjct: 241 PTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMH 300

[Close]

BLAST of CmaCh04G018950.1 vs. TrEMBL
Match: V4SV99_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003702mg PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.6e-79
Identity = 181/315 (57.46%), Postives = 205/315 (65.08%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHD-HVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           MEL++QD  IPIPI  NS Y G GH H  H  HHH   A  ++II  A +     P +  
Sbjct: 1   MELSSQDGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPHDNIIPVASSAPQISPINGP 60

Query: 61  EVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120
            + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEAL
Sbjct: 61  PIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEAL 120

Query: 121 TCSACNCHRNFHRKEIEGE--------PYDWLHH------PRLGRKLLVGGKNMIAPPEA 180
           TCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I     
Sbjct: 121 TCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATP 180

Query: 181 AAFAYPSAAGPAFISSR-----AQPHHMIMSYNMLGGGGGQSESEEHEEA-------RAY 240
            A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+         A 
Sbjct: 181 EALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVMAAR 240

Query: 241 SGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMH 289
               + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMH
Sbjct: 241 PTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMH 300

[Close]

BLAST of CmaCh04G018950.1 vs. TrEMBL
Match: B9SIQ1_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0825030 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 5.8e-77
Identity = 184/319 (57.68%), Postives = 216/319 (67.71%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGH------GHDHDHVIHH-HDPSAACNHIIAAAV----- 60
           MEL++  H + IPIPLNS Y G       GH H H+IHH H  S   NHII ++      
Sbjct: 1   MELSS--HEVEIPIPLNSTYGGGHGHAHGGHGHGHMIHHDHHNSTPHNHIIPSSAPQLTS 60

Query: 61  -NGGSPLPSSQMEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEF 120
            NG S LP++ ++    H+H  ++ +      KK VKYKECLKNHAA+MGGNATDGCGEF
Sbjct: 61  NNGPSSLPNTGLD---DHHHVTSTTST----FKKMVKYKECLKNHAAAMGGNATDGCGEF 120

Query: 121 MPSGEEGSIEALTCSACNCHRNFHRKEIEGE--PYDWL--HHPRLGRKLLVGGKNMIAPP 180
           MPSGEEGSIEALTCSACNCHRNFHRKEI+GE  P D+   H  R+GRK+++G    I  P
Sbjct: 121 MPSGEEGSIEALTCSACNCHRNFHRKEIDGETNPCDYYPPHFNRVGRKVILGHHKNILAP 180

Query: 181 EAAAFAYPSAAGPAFISSRAQ--PHH-MIMSYNMLGGGGGQSESEEHEEARAY---SGPM 240
           EA    YP+  G   + SRA   PHH MIMSYNM  GG   SES+E E+           
Sbjct: 181 EA--LGYPTGTG-TLVPSRATVAPHHQMIMSYNM--GGSLPSESDEQEDGGGVVMARPQQ 240

Query: 241 MNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKH 296
           + KKR+RTKF+ EQKEKML FAEKVGWKIQKQEE+VVQQFC+EIGVKRRVLKVWMHNNKH
Sbjct: 241 LVKKRYRTKFSQEQKEKMLNFAEKVGWKIQKQEEAVVQQFCQEIGVKRRVLKVWMHNNKH 300

[Close]

BLAST of CmaCh04G018950.1 vs. TrEMBL
Match: U5GNK9_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s23860g PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.4e-75
Identity = 171/299 (57.19%), Postives = 199/299 (66.56%), Query Frame = 1


Query: 2   ELTTQDHPIPIPIPLNSRYVG-HGHDHDHVIHHHDPSAACNH--IIAAAVNGGSPLPSSQ 61
           E+    H   IPIPLNS + G HGH H H+IHH  P+   NH  II++       +PSS 
Sbjct: 16  EMELSSHEAGIPIPLNSTFGGAHGHGHGHLIHHDHPAVPHNHNNIISSTA---PQIPSSN 75

Query: 62  MEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEA 121
               +       S ++N+   KK V+Y+ECLKNHAASMGGNATDGCGEFMPSGEEGSIEA
Sbjct: 76  NGTSI----TTASIDDNHVPYKKMVRYRECLKNHAASMGGNATDGCGEFMPSGEEGSIEA 135

Query: 122 LTCSACNCHRNFHRKEIEGEPYDW----------LHHPRLGRKLLVGGKNMIAPPEAAAF 181
           LTCSACNCHRNFHRKEIEGE              +H  RLGRK+++G    I  PEA   
Sbjct: 136 LTCSACNCHRNFHRKEIEGEHTSCTGDHCYHNSPVHFNRLGRKVILGHHKSILAPEA--L 195

Query: 182 AYPSAAGPAFISSRAQPHH-MIMSYNMLGGGGGQSESEEHEEARAY---SGPMMNKKRFR 241
            YP+A G    S  + PHH MIMSYNM   G   SES+E E+           + KKRFR
Sbjct: 196 GYPTATGTLIPSRASAPHHQMIMSYNM---GSLPSESDEQEDGGGVLMARPAQLMKKRFR 255

Query: 242 TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKD 284
           TKF+ EQKEKML FAEKVGWK+QKQEE+VVQQFC+EIGVKRRVLKVWMHNNKH+L KK+
Sbjct: 256 TKFSQEQKEKMLNFAEKVGWKLQKQEETVVQQFCQEIGVKRRVLKVWMHNNKHSLAKKN 302

[Close]

BLAST of CmaCh04G018950.1 vs. TAIR10
Match: AT1G14440.1 (AT1G14440.1 homeobox protein 31)

HSP 1 Score: 234.2 bits (596), Expect = 1.0e-61
Identity = 153/315 (48.57%), Postives = 186/315 (59.05%), Query Frame = 1


Query: 1   MELTTQ-DHPIPIPIPLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           ME+ +Q DH +PIP  LN+ + G G  H H+IHHHD  AA N       N  +  P    
Sbjct: 1   MEIASQEDHDMPIP--LNTTF-GGGGSHGHMIHHHDHHAA-NSAPPTHNNNNTTQPPP-- 60

Query: 61  EVELHHN-HNNNSNNNNNNNT----------KKQVKYKECLKNHAASMGGNATDGCGEFM 120
            + LH N H NN +++++ +           K  +KYKECLKNHAA+MGGNATDGCGEFM
Sbjct: 61  -MPLHGNGHGNNYDHHHHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFM 120

Query: 121 PSGEEGSIEALTCSACNCHRNFHRKEIEGE-------PYDWLHHPRLGRKLLVGGKNMIA 180
           PSGE+GSIEALTCSACNCHRNFHRKE+EGE       PY   H     RKL++  + +  
Sbjct: 121 PSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAMSPY---HQHPPHRKLMLNHQKI-- 180

Query: 181 PPEAAAFAYPSAAGPAFISSRAQPHHMIM-----SYNMLGGGGGQSESEEHEEARAYSGP 240
                                A PH MIM     +Y  +       +  E +     S  
Sbjct: 181 -------------------RSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRS 240

Query: 241 MMN-----KKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVW 287
           + N     KKRFRTKFT EQKEKML FAEKVGWKIQ+QE+ VVQ+FCEEIGVKRRVLKVW
Sbjct: 241 LPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVW 284

[Close]

BLAST of CmaCh04G018950.1 vs. TAIR10
Match: AT2G02540.1 (AT2G02540.1 homeobox protein 21)

HSP 1 Score: 228.4 bits (581), Expect = 5.7e-60
Identity = 144/297 (48.48%), Postives = 179/297 (60.27%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQME 60
           ME+ +Q+ PIPI    N+ Y   G  H ++ HHH  ++A + +     N   PL  S   
Sbjct: 1   MEIASQEDPIPI----NTSYGNSGGGHGNMNHHHHANSAPSSLNITTSN---PLLVSSNS 60

Query: 61  VELHHNHNNNSNNNNN-----NNTKKQ----VKYKECLKNHAASMGGNATDGCGEFMPSG 120
             L  NH+++ +++        N KK+    +KYKECLKNHAA+MGGNA DGCGEFMPSG
Sbjct: 61  NGLGKNHDHSHHHHVGYNIMVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSG 120

Query: 121 EEGSIEALTCSACNCHRNFHRKEIEGE------PYDWLHHPRLGRKLLVGGKNMIAPPEA 180
           EEGSIEALTCS CNCHRNFHR+E EGE      PY   H P   ++ L+    MI  P  
Sbjct: 121 EEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNHHQPPPQQRKLMFHHKMIKSPLP 180

Query: 181 AAFAYPSAAGPAFISSRAQPHHMIMSYNMLGGGGGQSESEEHEEARAYSGPMMNKKRFRT 240
                P     A  +S ++    +M      GGG  +  +       YS     KKRFRT
Sbjct: 181 QQMIMPIGVTTAGSNSESED---LMEEE---GGGSLTFRQPPPPPSPYSYGHNQKKRFRT 240

Query: 241 KFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKK 283
           KFT EQKEKM+ FAE+VGWKIQ+QEESVVQQ C+EIG++RRVLKVWMHNNK NL KK
Sbjct: 241 KFTQEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIRRRVLKVWMHNNKQNLSKK 284

[Close]

BLAST of CmaCh04G018950.1 vs. TAIR10
Match: AT1G75240.1 (AT1G75240.1 homeobox protein 33)

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-44
Identity = 112/254 (44.09%), Postives = 143/254 (56.30%), Query Frame = 1


Query: 64  HHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSA 123
           HH   + S+ + +   K  V+Y+ECLKNHAAS+GG+  DGCGEFMPSGEEG+IEAL C+A
Sbjct: 55  HHQSKSPSSFSISAAAKPTVRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAA 114

Query: 124 CNCHRNFHRKEIEG---------EPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAA 183
           C+CHRNFHRKE++G           +   HH + G     GG     PP           
Sbjct: 115 CDCHRNFHRKEMDGVGSSDLISHHRHHHYHHNQYGG----GGGRRPPPPNMMLNPLMLPP 174

Query: 184 GPAFISSRAQPHHMI----------MSYNMLGGGGGQSESEEH---------EEARAYSG 243
            P +       + M           MS    GGGGG   S E          E A A +G
Sbjct: 175 PPNYQPIHHHKYGMSPPGGGGMVTPMSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAG 234

Query: 244 PM-----MNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKV 285
            M      +KKRFRTKFT +QKE+M+ FAEK+GW++ KQ+E  +++FC EIGVKR+V KV
Sbjct: 235 QMAFSMSSSKKRFRTKFTTDQKERMMDFAEKLGWRMNKQDEEELKRFCGEIGVKRQVFKV 294

[Close]

BLAST of CmaCh04G018950.1 vs. TAIR10
Match: AT4G24660.1 (AT4G24660.1 homeobox protein 22)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-42
Identity = 93/202 (46.04%), Postives = 124/202 (61.39%), Query Frame = 1


Query: 82  QVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYD 141
           +++Y+ECLKNHA ++GG+A DGC EFMPSGE+G+++AL C+AC CHRNFHRKE E     
Sbjct: 46  KIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES---- 105

Query: 142 WLHHPRLGRKLLVGGKNMIAPPEAAAFAYP-SAAGPAFISSRAQPHHMIMSYNMLGGGGG 201
                       +GG+    P        P    G   ++S A P+              
Sbjct: 106 ------------IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYR------------P 165

Query: 202 QSESEEHEEARAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEE 261
            + S + E+    S      KRFRTKFTAEQKEKML FAE++GW+IQK ++  V+QFC E
Sbjct: 166 PAASGDEEDTSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAE 219

Query: 262 IGVKRRVLKVWMHNNKHNLGKK 283
            GV+R+VLK+WMHNNK++LGKK
Sbjct: 226 TGVRRQVLKIWMHNNKNSLGKK 219

[Close]

BLAST of CmaCh04G018950.1 vs. TAIR10
Match: AT5G65410.1 (AT5G65410.1 homeobox protein 25)

HSP 1 Score: 169.9 bits (429), Expect = 2.4e-42
Identity = 94/211 (44.55%), Postives = 129/211 (61.14%), Query Frame = 1


Query: 84  KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEPYDWL 143
           +++ECLKN A ++GG+A DGCGEFMP+G EG+I+AL C+AC CHRNFHRKE+   PY   
Sbjct: 74  RFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKEL---PY--F 133

Query: 144 HHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGPAFISSRAQPHHMIMSYNMLGGGGGQSE 203
           HH           ++   PP    +  P+        S+A P  + +          +  
Sbjct: 134 HH--------APPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQ------RER 193

Query: 204 SEEHEEARAYSGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGV 263
           SE+  E  +       +KR RTKFTAEQKE+ML  AE++GW+IQ+Q++ V+Q+FC+E GV
Sbjct: 194 SEDPMETSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETGV 253

Query: 264 KRRVLKVWMHNNKHNLGKKDTISPPHSPTPL 295
            R+VLKVW+HNNKH LGK        SP+PL
Sbjct: 254 PRQVLKVWLHNNKHTLGK--------SPSPL 257

[Close]

BLAST of CmaCh04G018950.1 vs. NCBI nr
Match: gi|659121291|ref|XP_008460585.1| (PREDICTED: zinc-finger homeodomain protein 4 [Cucumis melo])

HSP 1 Score: 483.4 bits (1243), Expect = 2.8e-133
Identity = 245/303 (80.86%), Postives = 257/303 (84.82%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIP--LNSRYVGHGHDHDHVIHHHDPSAACNHIIAAAVNGGSPLPSSQ 60
           MELTT D PIPIPIP  LNSRY GH HDHDH+IHHHDPS+  NHII+A VNG +    +Q
Sbjct: 1   MELTTHDPPIPIPIPIPLNSRYAGHNHDHDHIIHHHDPSSTRNHIISATVNGSN----NQ 60

Query: 61  MEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEA 120
           MEV+LHH+      NNNNNN KK +KYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEA
Sbjct: 61  MEVDLHHH------NNNNNNNKKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEA 120

Query: 121 LTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAAGPAF 180
           LTCSACNCHRNFHRKEIEGEPYDWLHH RLGRKLLVGGKNMI PPE AAFAYP+A G  F
Sbjct: 121 LTCSACNCHRNFHRKEIEGEPYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAGGATF 180

Query: 181 ISSRA---QPHHMIMSYNMLGGGGGQSESEEHEE-------ARAYSGPMMNKKRFRTKFT 240
           ISSRA   QPHHMIMSYNMLGGGGG SESEE EE        R YSG MMNKKRFRTKFT
Sbjct: 181 ISSRAATTQPHHMIMSYNMLGGGGGHSESEEQEEGIGAGVGGRVYSGAMMNKKRFRTKFT 240

Query: 241 AEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDTISPP 292
            EQKEKMLRFAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMHNNKHNL KK+T+SP 
Sbjct: 241 TEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKETMSPS 293

[Close]

BLAST of CmaCh04G018950.1 vs. NCBI nr
Match: gi|449450205|ref|XP_004142854.1| (PREDICTED: zinc-finger homeodomain protein 4 [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 9.9e-131
Identity = 245/307 (79.80%), Postives = 255/307 (83.06%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIP--LNSRYVGH----GHDHDHVIHHHDPSAACNHIIAAAVNGGSPL 60
           MELTT D PIPIPIP  LNSRY GH     HDHDH+IHHHD S+  NHII+A VNGG+  
Sbjct: 1   MELTTHDPPIPIPIPIPLNSRYAGHDHDHNHDHDHIIHHHDSSSTRNHIISATVNGGN-- 60

Query: 61  PSSQMEVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEG 120
              QMEV+LHH+       NNNNN KK +KYKECLKNHAASMGGNATDGCGEFMPSGEEG
Sbjct: 61  ---QMEVDLHHH------TNNNNNNKKHIKYKECLKNHAASMGGNATDGCGEFMPSGEEG 120

Query: 121 SIEALTCSACNCHRNFHRKEIEGEPYDWLHHPRLGRKLLVGGKNMIAPPEAAAFAYPSAA 180
           SIEALTC ACNCHRNFHRKEIEGEPYDWLHH RLGRKLLVGGKNMI PPE AAFAYP+A 
Sbjct: 121 SIEALTCLACNCHRNFHRKEIEGEPYDWLHHSRLGRKLLVGGKNMIGPPEPAAFAYPTAG 180

Query: 181 GPAFISSRA---QPHHMIMSYNMLGGGGGQSESEEHEE-------ARAYSGPMMNKKRFR 240
           G  FISSRA   QPHHMIMSYNMLGGGGG SESEE EE        R YSG MMNKKRFR
Sbjct: 181 GATFISSRAATTQPHHMIMSYNMLGGGGGHSESEEQEEGMGAGVGGRVYSGAMMNKKRFR 240

Query: 241 TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMHNNKHNLGKKDT 292
           TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMHNNKHNL KKDT
Sbjct: 241 TKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKDT 296

[Close]

BLAST of CmaCh04G018950.1 vs. NCBI nr
Match: gi|641822556|gb|KDO42061.1| (hypothetical protein CISIN_1g048741mg [Citrus sinensis])

HSP 1 Score: 303.9 bits (777), Expect = 3.0e-79
Identity = 182/319 (57.05%), Postives = 207/319 (64.89%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHD-HVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           MEL++QD  IPIPI  NS Y G GH H  H  HHH   A  ++II  A +     P +  
Sbjct: 1   MELSSQDGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPHDNIIPVASSAPQISPINGP 60

Query: 61  EVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120
            + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEAL
Sbjct: 61  PIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEAL 120

Query: 121 TCSACNCHRNFHRKEIEGE--------PYDWLHH------PRLGRKLLVGGKNMIAPPEA 180
           TCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I     
Sbjct: 121 TCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATP 180

Query: 181 AAFAYPSAAGPAFISSR-----AQPHHMIMSYNMLGGGGGQSESEEHEEA-------RAY 240
            A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+         A 
Sbjct: 181 EALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVMAAR 240

Query: 241 SGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMH 293
               + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMH
Sbjct: 241 PTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMH 300

[Close]

BLAST of CmaCh04G018950.1 vs. NCBI nr
Match: gi|567877747|ref|XP_006431432.1| (hypothetical protein CICLE_v10003702mg [Citrus clementina])

HSP 1 Score: 303.1 bits (775), Expect = 5.2e-79
Identity = 181/315 (57.46%), Postives = 205/315 (65.08%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHD-HVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           MEL++QD  IPIPI  NS Y G GH H  H  HHH   A  ++II  A +     P +  
Sbjct: 1   MELSSQDGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPHDNIIPVASSAPQISPINGP 60

Query: 61  EVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120
            + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEAL
Sbjct: 61  PIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEAL 120

Query: 121 TCSACNCHRNFHRKEIEGE--------PYDWLHH------PRLGRKLLVGGKNMIAPPEA 180
           TCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I     
Sbjct: 121 TCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATP 180

Query: 181 AAFAYPSAAGPAFISSR-----AQPHHMIMSYNMLGGGGGQSESEEHEEA-------RAY 240
            A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+         A 
Sbjct: 181 EALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVMAAR 240

Query: 241 SGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMH 289
               + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMH
Sbjct: 241 PTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMH 300

[Close]

BLAST of CmaCh04G018950.1 vs. NCBI nr
Match: gi|568833299|ref|XP_006470838.1| (PREDICTED: zinc-finger homeodomain protein 4 [Citrus sinensis])

HSP 1 Score: 302.4 bits (773), Expect = 8.8e-79
Identity = 181/319 (56.74%), Postives = 207/319 (64.89%), Query Frame = 1


Query: 1   MELTTQDHPIPIPIPLNSRYVGHGHDHD-HVIHHHDPSAACNHIIAAAVNGGSPLPSSQM 60
           MEL++Q+  IPIPI  NS Y G GH H  H  HHH   A  ++II  A +     P +  
Sbjct: 1   MELSSQEGEIPIPI--NSAYGGGGHGHMIHHDHHHHHHAPHDNIIPVASSAPQISPINGP 60

Query: 61  EVELHHNHNNNSNNNNNNNTKKQVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEAL 120
            + +  N  +  N +  N  KK VKYKECLKNHAA MGGNATDGCGEFMPSGEEG+IEAL
Sbjct: 61  PIPISTNLEDQQNGSTINVNKKMVKYKECLKNHAAGMGGNATDGCGEFMPSGEEGTIEAL 120

Query: 121 TCSACNCHRNFHRKEIEGE--------PYDWLHH------PRLGRKLLVGGKNMIAPPEA 180
           TCSACNCHRNFHRKEIEGE        P+D+ HH       R+GRK+++G    I     
Sbjct: 121 TCSACNCHRNFHRKEIEGEQQQQAAINPFDYYHHHMNPHFNRVGRKVILGHHKNILAATP 180

Query: 181 AAFAYPSAAGPAFISSR-----AQPHHMIMSYNMLGGGGGQSESEEHEEA-------RAY 240
            A  YP+  G   ISSR       PH MIMSYNM   G   SES+EHE+         A 
Sbjct: 181 EALGYPTPTG-TLISSRPVGGGPTPHQMIMSYNM---GSIPSESDEHEDGIGGGVVMAAR 240

Query: 241 SGPMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCEEIGVKRRVLKVWMH 293
               + KKRFRTKFT EQKEKM  FAEKVGWKIQKQEESVVQQFC+EIGVKRRVLKVWMH
Sbjct: 241 PTAQLVKKRFRTKFTQEQKEKMFNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMH 300

The following BLAST results are available for this feature:

BLAST of CmaCh04G018950.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZHD4_ARATH	1.9e-60	48.57	Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana GN=ZHD4 PE=1 SV=1	[more]
ZHD3_ARATH	1.0e-58	48.48	Zinc-finger homeodomain protein 3 OS=Arabidopsis thaliana GN=ZHD3 PE=1 SV=1	[more]
ZHD4_ORYSJ	1.3e-53	51.04	Zinc-finger homeodomain protein 4 OS=Oryza sativa subsp. japonica GN=ZHD4 PE=2 S...	[more]
ZHD3_ORYSJ	5.2e-47	40.00	Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica GN=ZHD3 PE=3 S...	[more]
ZHD5_ARATH	3.5e-43	44.09	Zinc-finger homeodomain protein 5 OS=Arabidopsis thaliana GN=ZHD5 PE=1 SV=1	[more]

BLAST of CmaCh04G018950.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSI7_CUCSA	6.9e-131	79.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527900 PE=4 SV=1	[more]
A0A067DTZ0_CITSI	2.1e-79	57.05	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048741mg PE=4 SV=1	[more]
V4SV99_9ROSI	3.6e-79	57.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003702mg PE=4 SV=1	[more]
B9SIQ1_RICCO	5.8e-77	57.68	Transcription factor, putative OS=Ricinus communis GN=RCOM_0825030 PE=4 SV=1	[more]
U5GNK9_POPTR	2.4e-75	57.19	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s23860g P...	[more]

BLAST of CmaCh04G018950.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14440.1	1.0e-61	48.57	homeobox protein 31	[more]
AT2G02540.1	5.7e-60	48.48	homeobox protein 21	[more]
AT1G75240.1	2.0e-44	44.09	homeobox protein 33	[more]
AT4G24660.1	1.1e-42	46.04	homeobox protein 22	[more]
AT5G65410.1	2.4e-42	44.55	homeobox protein 25	[more]

BLAST of CmaCh04G018950.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121291\|ref\|XP_008460585.1\|	2.8e-133	80.86	PREDICTED: zinc-finger homeodomain protein 4 [Cucumis melo]	[more]
gi\|449450205\|ref\|XP_004142854.1\|	9.9e-131	79.80	PREDICTED: zinc-finger homeodomain protein 4 [Cucumis sativus]	[more]
gi\|641822556\|gb\|KDO42061.1\|	3.0e-79	57.05	hypothetical protein CISIN_1g048741mg [Citrus sinensis]	[more]
gi\|567877747\|ref\|XP_006431432.1\|	5.2e-79	57.46	hypothetical protein CICLE_v10003702mg [Citrus clementina]	[more]
gi\|568833299\|ref\|XP_006470838.1\|	8.8e-79	56.74	PREDICTED: zinc-finger homeodomain protein 4 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006455	Homeodomain_ZF_HD
IPR006456	ZF_HD_homeobox_Cys/His_dimer
IPR009057	Homeobox-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh04G018950	CmaCh04G018950	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh04G018950.1	CmaCh04G018950.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G018950.1.exon.1	CmaCh04G018950.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G018950.1.CDS.1	CmaCh04G018950.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006455	Homeodomain, ZF-HD class	TIGRFAMs	TIGR01565	TIGR01565	coord: 220..276 score: 6.5
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PRODOM	PD125774		coord: 83..138 score: 2.0
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 82..135 score: 1.5
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAMs	TIGR01566	TIGR01566	coord: 84..135 score: 6.6
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROFILE	PS51523	ZF_HD_DIMER	coord: 85..134 score: 27
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 209..282 score: 6.9
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 212..281 score: 6.01
None	No IPR available	PANTHER	PTHR31948	FAMILY NOT NAMED	coord: 71..294 score: 4.4E
None	No IPR available	PANTHER	PTHR31948:SF19	ZINC-FINGER HOMEODOMAIN PROTEIN 3-RELATED	coord: 71..294 score: 4.4E