CmaCh04G010380 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTATACAAACACTCCCAAAAGATGTTCGTATATCAAACAAGAAGAACGAATATCCTGAAGATTACTGTTTCCATTTTCAGTTAAATCTTCGTCTTTCTTCCCGTTCTTCCTCCAGTTGCAGAGCTTAATCTAATTTATCCGCTGTTCTTCTGCGTTCTTGTACTGGTTTCAGTCATTCTGTTCGCTCTCCAATCGGAAGAATCTGTAAGCATTTTAGTACTTTCAAGTGATTGTGTATTTTTTGAACTCCTTTATTTTATTTTTGTTTGATTCTTTCACGATAATGAATATTGAATCCACTTGCTTACTGCTTCTTGGGAAGATTTTTTAGATTACTTTTTAGCGTCTGTTCGGGTTCCGCGATTGCTATTTTTTATTCTTGAATCACTCCACTTCTGCGATTGACTGGCCGTTGAATTTAAAAGTTCGACGCTGAATTTGAAAGCAGTTTTTCAAGAATCAAATGTTTTTTTTTTTCTTCTGTGAAGAAGGTTGATTGAAATTTTACGGAGTGGATAGATTTTTTTTTTTTTTTGTGGTTCTGTAGGTTATAATTATGCGAGTTTTTTAGTGAAGCAAATGGAAACGGACTTTCTTGATACGCTTTTGAATACAAAATTCTTCACTTCTTGCAATCTTCATCCTAGTCTCCAGACATATAAATTCTGCATTGATTGTAATGTTAGCTTCTGCACGAATTGTACAGTCCATAATCTTCATCGGCAGGTTCGTATCTGGAGATATTCCTATCATGATGTTGTGCGCGTTCAGGACATGAAGAATCACTTTTGCTGTGCAGAGATTCAGGTATAATACATTTTTTCCCTTGTGCCTCCCGTGTCTGGGCCTTGCGACGTGTGAGTGCCGAGCAAATTTCCGACTATAATTGTCTTTGATAGGAAAGATTCCTGAATTCCATCTGTTTGTTGCTGATCTCTTTGCTTATGTTGTTGAAATCATCGACTTTAGAGATAGGTTTTCCTTTTCTACATTCAAACAGATAGTTTTTAAATTTGTTAGCCAAATTATCTGGTTTTTAAGCACTAGTAATTCTTGAATCGAAAATAATATGTTCTTGAGGAAATCTCACAAGCCTGATTTTGATCCTTGCCAATTTGAATGGATGAATATACAATTTGATACTTTGATTCCAGTCCGATACCAGTTTTAGTAATGGGAATAAAGTTTGTTTGCTATCATTTTGTTTATTGGTTTGTTTTGTAAAAGTTTGCCTTTGTTCTATGAATCCATCTCTATGCCCCCTAACTTGAAGCCCCCAATTGCTTGATTCTGCAGTCATATCGAGTCAATGGTGAAATAGCTGTTCATCTAAACTCCCGTGGTCAACCCGTCGACACCAAATCAACAAAGCCGAAGTTTGGTGATTTTTGTGAAGATTGTGGCAGAAGTGTAAATGATCCTCATCCCTTCTGTTCCATGGCTGCAAGGTTAGAAACATATGAACCTTATCCCACAAACCATTCGAGTGTAGAAACTTCTATGCGTTTTAAAAACCTTGAGACTAATGCCTGTACATAACGGGTCAAAGCTGACAATACTTGCTAGCGGTAGGCTTAGGCTGTTACAAATGATATCAGAGTCAGCCATCGAGGGGTATGCCAGCGAGGATGTTGGGTGTCACAACCATACTATGAAGAGAGTAGGTTGTGACCCTCACGTCATGACAAGCAAAGTGGCGTCCCTCAATAGACGCCCATCCAGCCACATGTGGGCCAATATAGAAGAGTGTCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCACCACGCAAAGTGGGTATTGAAGACAAGTTGAGACACAAGCAAGACAGAGACATCAGAATAGTCATGAAGTGCAAAGATAGACTTGTTGAAGGGCCGGGTAGGGCCTCGGGCCTTAACTTCAAAAGTCGGAGTTCTTGA ATGTTTATACAAACACTCCCAAAAGATGTTCGTATATCAAACAAGAAGAACGAATATCCTGAAGATTACTGTTTCCATTTTCATCATTCTGTTCGCTCTCCAATCGGAAGAATCTTCCATAATCTTCATCGGCAGGTTCGTATCTGGAGATATTCCTATCATGATGTTGTGCGCGTTCAGGACATGAAGAATCACTTTTGCTGTGCAGAGATTCAGTCATATCGAGTCAATGGTGAAATAGCTGTTCATCTAAACTCCCGTGGTCAACCCGTCGACACCAAATCAACAAAGCCGAAGTTTGGTGATTTTTGTGAAGATTGTGGCAGAAGTGTAAATGATCCTCATCCCTTCTGTTCCATGGCTGCAAGACTAATGCCTGTACATAACGGGTCAAAGCTGACAATACTTGCTAGCGGTAGGCTTAGGCTGTTACAAATGATATCAGAGTCAGCCATCGAGGGGTATGCCAGCGAGGATGTTGGGTGTCACAACCATACTATGAAGAGAGTAGGTTGTGACCCTCACGTCATGACAAGCAAAGTGGCGTCCCTCAATAGACGCCCATCCAGCCACATGTGGGCCAATATAGAAGAGTGTCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCACCACGCAAAGTGGGTATTGAAGACAAGTTGAGACACAAGCAAGACAGAGACATCAGAATAGTCATGAAGTGCAAAGATAGACTTGTTGAAGGGCCGGGTAGGGCCTCGGGCCTTAACTTCAAAAGTCGGAGTTCTTGA ATGTTTATACAAACACTCCCAAAAGATGTTCGTATATCAAACAAGAAGAACGAATATCCTGAAGATTACTGTTTCCATTTTCATCATTCTGTTCGCTCTCCAATCGGAAGAATCTTCCATAATCTTCATCGGCAGGTTCGTATCTGGAGATATTCCTATCATGATGTTGTGCGCGTTCAGGACATGAAGAATCACTTTTGCTGTGCAGAGATTCAGTCATATCGAGTCAATGGTGAAATAGCTGTTCATCTAAACTCCCGTGGTCAACCCGTCGACACCAAATCAACAAAGCCGAAGTTTGGTGATTTTTGTGAAGATTGTGGCAGAAGTGTAAATGATCCTCATCCCTTCTGTTCCATGGCTGCAAGACTAATGCCTGTACATAACGGGTCAAAGCTGACAATACTTGCTAGCGGTAGGCTTAGGCTGTTACAAATGATATCAGAGTCAGCCATCGAGGGGTATGCCAGCGAGGATGTTGGGTGTCACAACCATACTATGAAGAGAGTAGGTTGTGACCCTCACGTCATGACAAGCAAAGTGGCGTCCCTCAATAGACGCCCATCCAGCCACATGTGGGCCAATATAGAAGAGTGTCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCACCACGCAAAGTGGGTATTGAAGACAAGTTGAGACACAAGCAAGACAGAGACATCAGAATAGTCATGAAGTGCAAAGATAGACTTGTTGAAGGGCCGGGTAGGGCCTCGGGCCTTAACTTCAAAAGTCGGAGTTCTTGA MFIQTLPKDVRISNKKNEYPEDYCFHFHHSVRSPIGRIFHNLHRQVRIWRYSYHDVVRVQDMKNHFCCAEIQSYRVNGEIAVHLNSRGQPVDTKSTKPKFGDFCEDCGRSVNDPHPFCSMAARLMPVHNGSKLTILASGRLRLLQMISESAIEGYASEDVGCHNHTMKRVGCDPHVMTSKVASLNRRPSSHMWANIEECHDAIEEDDASSNTPPRKVGIEDKLRHKQDRDIRIVMKCKDRLVEGPGRASGLNFKSRSS
BLAST of CmaCh04G010380 vs. TrEMBL
Match: A0A0A0KL89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G023890 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 5.8e-25 Identity = 51/85 (60.00%), Postives = 69/85 (81.18%), Query Frame = 1
BLAST of CmaCh04G010380 vs. TrEMBL
Match: A0A067KT65_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04796 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.5e-20 Identity = 51/90 (56.67%), Postives = 69/90 (76.67%), Query Frame = 1
BLAST of CmaCh04G010380 vs. TrEMBL
Match: D7T8I1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g06060 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19 Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 1
BLAST of CmaCh04G010380 vs. TrEMBL
Match: B9SNG3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1148660 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.2e-19 Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 1
BLAST of CmaCh04G010380 vs. TrEMBL
Match: A0A059BE46_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02080 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.5e-17 Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 1
BLAST of CmaCh04G010380 vs. TAIR10
Match: AT2G01818.1 (AT2G01818.1 PLATZ transcription factor family protein) HSP 1 Score: 88.6 bits (218), Expect = 6.2e-18 Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = 1
BLAST of CmaCh04G010380 vs. TAIR10
Match: AT2G12646.1 (AT2G12646.1 PLATZ transcription factor family protein) HSP 1 Score: 65.9 bits (159), Expect = 4.3e-11 Identity = 28/85 (32.94%), Postives = 48/85 (56.47%), Query Frame = 1
BLAST of CmaCh04G010380 vs. TAIR10
Match: AT1G43000.1 (AT1G43000.1 PLATZ transcription factor family protein) HSP 1 Score: 65.5 bits (158), Expect = 5.6e-11 Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 1
BLAST of CmaCh04G010380 vs. TAIR10
Match: AT2G27930.1 (AT2G27930.1 PLATZ transcription factor family protein) HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10 Identity = 37/107 (34.58%), Postives = 55/107 (51.40%), Query Frame = 1
BLAST of CmaCh04G010380 vs. TAIR10
Match: AT1G21000.1 (AT1G21000.1 PLATZ transcription factor family protein) HSP 1 Score: 62.4 bits (150), Expect = 4.7e-10 Identity = 43/136 (31.62%), Postives = 64/136 (47.06%), Query Frame = 1
BLAST of CmaCh04G010380 vs. NCBI nr
Match: gi|700194432|gb|KGN49609.1| (hypothetical protein Csa_5G023890 [Cucumis sativus]) HSP 1 Score: 122.9 bits (307), Expect = 8.4e-25 Identity = 51/85 (60.00%), Postives = 69/85 (81.18%), Query Frame = 1
BLAST of CmaCh04G010380 vs. NCBI nr
Match: gi|802596746|ref|XP_012072352.1| (PREDICTED: uncharacterized protein LOC105634154 [Jatropha curcas]) HSP 1 Score: 107.5 bits (267), Expect = 3.6e-20 Identity = 51/90 (56.67%), Postives = 69/90 (76.67%), Query Frame = 1
BLAST of CmaCh04G010380 vs. NCBI nr
Match: gi|297737601|emb|CBI26802.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 104.8 bits (260), Expect = 2.4e-19 Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 1
BLAST of CmaCh04G010380 vs. NCBI nr
Match: gi|731369099|ref|XP_010649544.1| (PREDICTED: uncharacterized protein LOC100247341 [Vitis vinifera]) HSP 1 Score: 104.8 bits (260), Expect = 2.4e-19 Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 1
BLAST of CmaCh04G010380 vs. NCBI nr
Match: gi|255573206|ref|XP_002527532.1| (PREDICTED: uncharacterized protein LOC8272293 [Ricinus communis]) HSP 1 Score: 104.4 bits (259), Expect = 3.1e-19 Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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