CsaV3_5G014490 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G014490
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	PLATZ transcription factor family protein, putative
Location	chr5 : 11490783 .. 11492726 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGAATTCATTTTTGTTCATCAAACAAGAAAATAAAGAAAATTCCTTCAGATTCTTGTTTCCATTTTCACTTTAATCTTCTCTTCTCTTCTCTTCTTCGTTCTTCCTCCATTCCAGAGCTTAATCCAATTTATCCTCCGCTTTTTCTGTCTTCATCTACTGCTCGGAACAATCTGTAAGCATTGTATTACCTTTTACTGAATACGCAATTTTCTAACTCTTTTCTTTCGTTCTTGGTTTATTCTGAGTAATGAATCCACTTCTTAACTGTTTCTTGTGAATGTTTTGTGGATGTGGATGTGATTGATTGTTATACTGTGTACTGCGTTTCATTCGAGCTCGGTTATTTGAATGGCTGTTAAATTAATTAATTTGATTCTGAAATTGAATGAAATTTGTTTGAGAATCGGATGATTTTTGTTTTCTTTTTGCTTTTTATTTTGTGTTCTGTAGGTTGTATTTATGCCAATTTTTTAGTGAAGAGAAATGGAATCAAACTGGCTTGGTACGCTTTTGAATACGAAATTCTACACTTCTTGCGATCTGCATCCTAATCTCTGGCGAAATAAGAAAAGTAGATTCTGTATTGATTGTAGTGTTAGCTTCTGCAAGAATTGTACAATCCACGATCTTCATCGGCAGGTTAACATCTGGAAATATGTGTATCGTGAAGTTGTGCGTGTTCAGGACATGGAGAAATACTTTTGCTGTTCAGAGATTCATGTATTATACATTCTTTCCCTTATTACAACTACCTGTAAGATATCCATTAGTAGTCTTTCATAGAAAATATTCCCTTTGTTGCTGATCTTTTTGCTTTTATGCAGTTGAAATCATTGAGATTTTGGATATATAGACTTTTTTTTTTTCACAGTTTGTTAGACAAATTTATCTGGCTGTTAAACAATAGTAAATAATCGAATCGGAGATGATATTTTCTTGAGGAAATCTCACAAGCTTAATTTTGATTCTTACCAATGGAATGAATGAATGAATGTACGATATTTTTTAATTCAGTCCAGTTTTAGTAATAGGAATATAATAGAGTTTGTTTGTTCTCTGTTAACTTTGTCTTTCTTCTATGGTATTCCATCTCTTTGCCTCATAACTTGAAGCCCCATTTGCTTGATTCTGCAGCCATATAAAGTAAATGGTAAACTAGCTGTTCATATAAACTCATGTGGTCAATCTGTCGACACCAAATCGCCGAAGAGGAAGTCCAGTAATCCTTGTGAAGAATGTGGCAAACATATACATGATCCTCACCGCTTCTGTTCAATTGCTTGCAAGGTATAGAAATATAAAAACCTTATAACAACTTTGTTAACTAAGATCATATTGTAAGCAATTTTAATGGTGTAAGAACGTCAGGTTTGTGTGAACTCAAAGATCAAGGACCACAGTGTTGGAACCGTCGTATCTCTGAGCCAGGATTCCGGTAACTTATCGTTCAAGGACAACAAAAGAAGCCCAGAAACAAATGCAAGTGAATTGGAATCAACCATATCAATTGCAGAGTCCATGGAAGAGACCAAAACTAGCACTTCATCTTTACAACCAAGAAAACGAAGAGTAAAGAGCATCCCTCACAGAGCTCCATTTTTCTGATAAGATGAAGATGCAACATTTTGCCGTCTTCATTTTAACTTCCCTTGTGGCTCTCAAATGGTATGCTGCTTAATTTTTATTACTTCGACTCATAATTCATAGAATGCCTAGCAGTGAAGTGAAGTGATCAATATAAAATTCATGATCAAAATGCTCCTAAACCCCCACTTCTGCAATCTCTCTACTGCATGATTTTGGAATTTCTTTTAGCAGTTTTGACAAGATTAGTTTGGTAGAGAAAGCTTTTCCTAAACCGATATAATTTTTTTTAAGAAACTTACTTAGGTGCATCCATTTTTGTGCATATCATTTAATCTTATTCAATCATAATTTAGT

mRNA sequence

ATGGAGAAATACTTTTGCTGTTCAGAGATTCATCCATATAAAGTAAATGGTAAACTAGCTGTTCATATAAACTCATGTGGTCAATCTGTCGACACCAAATCGCCGAAGAGGAAGTCCAGTAATCCTTGTGAAGAATGTGGCAAACATATACATGATCCTCACCGCTTCTGTTCAATTGCTTGCAAGGTTTGTGTGAACTCAAAGATCAAGGACCACAGTGTTGGAACCGTCGTATCTCTGAGCCAGGATTCCGGTAACTTATCGTTCAAGGACAACAAAAGAAGCCCAGAAACAAATGCAAGTGAATTGGAATCAACCATATCAATTGCAGAGTCCATGGAAGAGACCAAAACTAGCACTTCATCTTTACAACCAAGAAAACGAAGAGTAAAGAGCATCCCTCACAGAGCTCCATTTTTCTGA

Coding sequence (CDS)

ATGGAGAAATACTTTTGCTGTTCAGAGATTCATCCATATAAAGTAAATGGTAAACTAGCTGTTCATATAAACTCATGTGGTCAATCTGTCGACACCAAATCGCCGAAGAGGAAGTCCAGTAATCCTTGTGAAGAATGTGGCAAACATATACATGATCCTCACCGCTTCTGTTCAATTGCTTGCAAGGTTTGTGTGAACTCAAAGATCAAGGACCACAGTGTTGGAACCGTCGTATCTCTGAGCCAGGATTCCGGTAACTTATCGTTCAAGGACAACAAAAGAAGCCCAGAAACAAATGCAAGTGAATTGGAATCAACCATATCAATTGCAGAGTCCATGGAAGAGACCAAAACTAGCACTTCATCTTTACAACCAAGAAAACGAAGAGTAAAGAGCATCCCTCACAGAGCTCCATTTTTCTGA

Protein sequence

MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIACKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTSTSSLQPRKRRVKSIPHRAPFF

Homology

[Close]

BLAST of CsaV3_5G014490 vs. NCBI nr
Match: KGN49609.1 (hypothetical protein Csa_5G023890 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 2.3e-73
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIA 60
           MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIA
Sbjct: 69  MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIA 128

Query: 61  CKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTST 120
           CKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTST
Sbjct: 129 CKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTST 188

Query: 121 SSLQPRKRRVKSIPHRAPFF 141
           SSLQPRKRRVKSIPHRAPFF
Sbjct: 189 SSLQPRKRRVKSIPHRAPFF 208

[Close]

BLAST of CsaV3_5G014490 vs. NCBI nr
Match: XP_004142307.2 (PREDICTED: uncharacterized protein LOC101214401 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 2.3e-73
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIA 60
           MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIA
Sbjct: 1   MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIA 60

Query: 61  CKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTST 120
           CKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTST
Sbjct: 61  CKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTST 120

Query: 121 SSLQPRKRRVKSIPHRAPFF 141
           SSLQPRKRRVKSIPHRAPFF
Sbjct: 121 SSLQPRKRRVKSIPHRAPFF 140

[Close]

BLAST of CsaV3_5G014490 vs. NCBI nr
Match: XP_022996504.1 (uncharacterized protein LOC111491731 [Cucurbita maxima])

HSP 1 Score: 189.5 bits (480), Expect = 7.8e-45
Identity = 98/139 (70.50%), Postives = 112/139 (80.58%), Query Frame = 0


Query: 2   EKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIAC 61
           EKYF CSEIH YKVNG+++VH+NS GQSVD K PK KS   CE+CG+++  P+RFCSIAC
Sbjct: 70  EKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQYPNRFCSIAC 129

Query: 62  KVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTSTS 121
           KV VNSK+KD S+ T+VSLS D GNLSFK+ K S ETNASELESTISIAES EETK S S
Sbjct: 130 KVSVNSKLKDQSIRTIVSLSPDFGNLSFKE-KNSAETNASELESTISIAESREETKASPS 189

Query: 122 SLQPRKRRVKSIPHRAPFF 141
           S QPRKRR K  PHR+P F
Sbjct: 190 SSQPRKRRRKDTPHRSPSF 207

[Close]

BLAST of CsaV3_5G014490 vs. NCBI nr
Match: XP_022942707.1 (uncharacterized protein LOC111447662 [Cucurbita moschata])

HSP 1 Score: 189.1 bits (479), Expect = 1.0e-44
Identity = 98/139 (70.50%), Postives = 112/139 (80.58%), Query Frame = 0


Query: 2   EKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIAC 61
           EKYF CSEIH YKVNG+++VH+NS GQSVD K PK KS   CE+CG+++  P+RFCSIAC
Sbjct: 70  EKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQYPNRFCSIAC 129

Query: 62  KVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTSTS 121
           KV VNSK+KD S+ T+VSLS D GNLSFK+ K S ETNASELESTISIAES EETK S S
Sbjct: 130 KVSVNSKLKDQSIRTIVSLSPDFGNLSFKE-KTSAETNASELESTISIAESREETKASPS 189

Query: 122 SLQPRKRRVKSIPHRAPFF 141
           S QPRKRR K  PHR+P F
Sbjct: 190 SSQPRKRRRKDTPHRSPSF 207

[Close]

BLAST of CsaV3_5G014490 vs. NCBI nr
Match: XP_022146741.1 (uncharacterized protein LOC111015876 isoform X1 [Momordica charantia])

HSP 1 Score: 188.3 bits (477), Expect = 1.7e-44
Identity = 96/140 (68.57%), Postives = 116/140 (82.86%), Query Frame = 0


Query: 1   MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIA 60
           MEK+F CSEIH YKVNG+++VH+NS  QSVDTKSPK KS   CE+CG+H+ DP+RFCS+A
Sbjct: 69  MEKFFRCSEIHTYKVNGEVSVHLNSRRQSVDTKSPKAKSRGSCEDCGRHVQDPYRFCSVA 128

Query: 61  CKVCVNS-KIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTS 120
           CKV VNS K+K  S+GT++S S D GNLS+K+ + SPETNASELESTISIAES+EE K S
Sbjct: 129 CKVSVNSVKVKGQSIGTIISPSLDFGNLSYKE-RTSPETNASELESTISIAESIEEIKAS 188

Query: 121 TSSLQPRKRRVKSIPHRAPF 140
            SS +PRKRR K IPHR+PF
Sbjct: 189 PSSSRPRKRRRKGIPHRSPF 207

[Close]

BLAST of CsaV3_5G014490 vs. TAIR10
Match: AT2G01818.1 (PLATZ transcription factor family protein)

HSP 1 Score: 64.3 bits (155), Expect = 6.8e-11
Identity = 50/144 (34.72%), Postives = 71/144 (49.31%), Query Frame = 0


Query: 1   MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTK-SPKRKSSNPCEECGKHIHD-PHRFCS 60
           ++ YF CSEI  YK+NG+ A+H+NS  Q+ D + S K K+   C  C ++I D P+ FCS
Sbjct: 82  IQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGASCVTCKRYIQDHPNLFCS 141

Query: 61  IACKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKT 120
           I+CK+   S  K H       L Q          + S E   S   S   ++E   E   
Sbjct: 142 ISCKISTPS--KKHKFCFSPKLEQSVLEKEHSTQEGSLEEKKSCTSSLTDVSED-SEVLL 201

Query: 121 STSSLQPRKR--RVKSIPHRAPFF 141
           S  S +P  R  + K I  R+PF+
Sbjct: 202 SDFSFRPLLRILKRKGISRRSPFY 222

[Close]

BLAST of CsaV3_5G014490 vs. TrEMBL
Match: tr|A0A0A0KL89|A0A0A0KL89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G023890 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.5e-73
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIA 60
           MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIA
Sbjct: 69  MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHDPHRFCSIA 128

Query: 61  CKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTST 120
           CKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTST
Sbjct: 129 CKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETKTST 188

Query: 121 SSLQPRKRRVKSIPHRAPFF 141
           SSLQPRKRRVKSIPHRAPFF
Sbjct: 189 SSLQPRKRRVKSIPHRAPFF 208

[Close]

BLAST of CsaV3_5G014490 vs. TrEMBL
Match: tr|W9QTI6|W9QTI6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006762 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.7e-20
Identity = 71/147 (48.30%), Postives = 93/147 (63.27%), Query Frame = 0


Query: 1   MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTK-SPKRKSSNPCEECGKHIHD-PHRFCS 60
           M+K+  CS I  YK+NG+ AVH+N   QS D K S K   +  CE CG++I D P+RFCS
Sbjct: 109 MQKHLDCSRIQTYKINGEKAVHLNPRPQSKDAKPSTKSFCAGSCEACGRYIQDPPNRFCS 168

Query: 61  IACKV-CVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETK 120
           IACKV  V  + KD S   +       G+LSFK+N  S ETN SE+ES++S+AES EE  
Sbjct: 169 IACKVSLVPLEPKDQSQNFITVPIPQYGDLSFKENCNS-ETNLSEMESSLSLAESGEEVH 228

Query: 121 TS--TSSLQPRK--RRVKSIPHRAPFF 141
               +S+L+PRK  R+ K IP RAP +
Sbjct: 229 ACWVSSALKPRKLLRKRKGIPFRAPLY 254

[Close]

BLAST of CsaV3_5G014490 vs. TrEMBL
Match: tr|A0A061EGB3|A0A061EGB3_THECC (PLATZ transcription factor family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_011266 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.8e-19
Identity = 69/145 (47.59%), Postives = 93/145 (64.14%), Query Frame = 0


Query: 1   MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTK-SPKRKSSNPCEECGKHIHD-PHRFCS 60
           M+K+  CS+I  YK+NG+ AVH+N   Q+ D K S K K+   CE CG+++ D P+RFCS
Sbjct: 78  MQKHLDCSKIQTYKINGEKAVHLNPRPQAKDAKPSTKSKTGAACEACGRYLQDPPNRFCS 137

Query: 61  IACKV-CVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETK 120
           IACKV  V+ K KD S    + + Q+  +LS KDN+ S  +   E +S+I   +  EETK
Sbjct: 138 IACKVSAVDVKPKDQSDKLELPI-QEIPDLSLKDNQNSDISTEEEKQSSICSTDVSEETK 197

Query: 121 TSTS-SLQPRKR--RVKSIPHRAPF 140
           T  S SL+PRKR  + K IPHRAPF
Sbjct: 198 TWVSTSLKPRKRVNKRKGIPHRAPF 221

[Close]

BLAST of CsaV3_5G014490 vs. TrEMBL
Match: tr|A0A2R6PGM4|A0A2R6PGM4_ACTCH (E3 ubiquitin-protein like (Fragment) OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc28366 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-18
Identity = 68/149 (45.64%), Postives = 90/149 (60.40%), Query Frame = 0


Query: 1   MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHD-PHRFCSI 60
           ++KY  CS+I  YK+NG+ AVH+N   QS D KS K KS   CE CG+HI D P+RFCSI
Sbjct: 81  IQKYLDCSKIQTYKINGEKAVHLNPRPQSKDPKSSKSKSGVSCEACGRHIQDLPNRFCSI 140

Query: 61  ACKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPET-------NASELESTISIAES 120
           ACKV   S   D+S   +     + G LS K+N  S ET       + S  ES++++++S
Sbjct: 141 ACKVSEIS--HDNSDNRISFPIPEFGELSLKENHTSEETITEKVSFSLSFKESSLALSDS 200

Query: 121 MEETKTSTSS-LQPRK--RRVKSIPHRAP 139
            EE   S SS L+PRK  R+ K +P RAP
Sbjct: 201 SEEAHASMSSVLKPRKKLRKRKGVPRRAP 227

[Close]

BLAST of CsaV3_5G014490 vs. TrEMBL
Match: tr|A0A2P5D254|A0A2P5D254_PARAD (PLATZ transcription factor family protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_103630 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.4e-18
Identity = 67/147 (45.58%), Postives = 92/147 (62.59%), Query Frame = 0


Query: 1   MEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTK-SPKRKSSNPCEECGKHIHD-PHRFCS 60
           M+K+  CS+I  YK+NG+ AVH+N   QS D K S K   +  CE CG++I D P+RFCS
Sbjct: 40  MQKHLDCSKIQTYKINGEKAVHLNPRPQSKDAKPSTKSFCAGSCEACGRYIQDPPNRFCS 99

Query: 61  IACKV-CVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAESMEETK 120
           I+CK+  V  K KD S   +        +LS K++  S ETN SE+ES++S+AES EE +
Sbjct: 100 ISCKISIVPLKPKDQSQNFITVPISQYEDLSLKESYNS-ETNLSEIESSLSLAESSEEVR 159

Query: 121 TS--TSSLQPRK--RRVKSIPHRAPFF 141
                S+L+PRK  R+ K IP RAP +
Sbjct: 160 ACWVNSALKPRKLLRKRKGIPFRAPLY 185

The following BLAST results are available for this feature:

BLAST of CsaV3_5G014490 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49609.1	2.3e-73	100.00	hypothetical protein Csa_5G023890 [Cucumis sativus]	[more]
XP_004142307.2	2.3e-73	100.00	PREDICTED: uncharacterized protein LOC101214401 [Cucumis sativus]	[more]
XP_022996504.1	7.8e-45	70.50	uncharacterized protein LOC111491731 [Cucurbita maxima]	[more]
XP_022942707.1	1.0e-44	70.50	uncharacterized protein LOC111447662 [Cucurbita moschata]	[more]
XP_022146741.1	1.7e-44	68.57	uncharacterized protein LOC111015876 isoform X1 [Momordica charantia]	[more]

BLAST of CsaV3_5G014490 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01818.1	6.8e-11	34.72	PLATZ transcription factor family protein	[more]

BLAST of CsaV3_5G014490 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G014490 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KL89\|A0A0A0KL89_CUCSA	1.5e-73	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G023890 PE=4 SV=1	[more]
tr\|W9QTI6\|W9QTI6_9ROSA	9.7e-20	48.30	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006762 PE=4 SV=1	[more]
tr\|A0A061EGB3\|A0A061EGB3_THECC	2.8e-19	47.59	PLATZ transcription factor family protein, putative OS=Theobroma cacao OX=3641 G...	[more]
tr\|A0A2R6PGM4\|A0A2R6PGM4_ACTCH	1.8e-18	45.64	E3 ubiquitin-protein like (Fragment) OS=Actinidia chinensis var. chinensis OX=15...	[more]
tr\|A0A2P5D254\|A0A2P5D254_PARAD	2.4e-18	45.58	PLATZ transcription factor family protein OS=Parasponia andersonii OX=3476 GN=Pa...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006734	DUF597

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G014490.1	CsaV3_5G014490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	Protein of unknown function DUF597	PFAM	PF04640	PLATZ	coord: 1..63 e-value: 6.2E-12 score: 45.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..127
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 1..140
None	No IPR available	PANTHER	PTHR31065:SF15	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..140

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G014490	CSPI05G00640	Wild cucumber (PI 183967)	cpicucB286
CsaV3_5G014490	Cucsa.174090	Cucumber (Gy14) v1	cgycucB278
CsaV3_5G014490	CmaCh04G000830	Cucurbita maxima (Rimu)	cmacucB0873
CsaV3_5G014490	CmaCh04G010380	Cucurbita maxima (Rimu)	cmacucB0870
CsaV3_5G014490	CmoCh04G000810	Cucurbita moschata (Rifu)	cmocucB0859
CsaV3_5G014490	Cp4.1LG01g05980	Cucurbita pepo (Zucchini)	cpecucB0528
CsaV3_5G014490	Cp4.1LG01g07350	Cucurbita pepo (Zucchini)	cpecucB0529
CsaV3_5G014490	CsGy5G010900	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G014490	Carg00146	Silver-seed gourd	carcucB0705
CsaV3_5G014490	Carg27434	Silver-seed gourd	carcucB1014
CsaV3_5G014490	Cla002205	Watermelon (97103) v1	cucwmB411
CsaV3_5G014490	ClCG07G005460	Watermelon (Charleston Gray)	cucwcgB428
CsaV3_5G014490	Cla97C07G133780	Watermelon (97103) v2	cucwmbB414
CsaV3_5G014490	Bhi07G000375	Wax gourd	cucwgoB517

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G014490	Cucurbita moschata (Rifu)	cmocucB0857
CsaV3_5G014490	Bottle gourd (USVL1VR-Ls)	cuclsiB392
CsaV3_5G014490	Melon (DHL92) v3.5.1	cucmeB419
CsaV3_5G014490	Melon (DHL92) v3.6.1	cucmedB412