CmaCh04G001110 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G001110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Potassium transporter
Location	Cma_Chr04 : 543866 .. 545048 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCGATTTCTCCATCAAACGTCGGATTCACATCACAATTCGGGCAGGGATGGAAGACGGCGAGGGAGATGACTCCCGTCAGAAGCTCGAATCTGAGAGTATCAGCAAAAGCGACGGAGAAGGGCGAGGAAAAAGAAGACGGCAGTGAAAGGAAGAACAAGCAGTCGCTGTTCAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGGTCGAGTCGCGACGCTGAGCTTCTCGAAGACGCCCGTCAGGCCACCAAATCCGGCGGTAGAATGAGCCAGGAACAGGTAAACGTTAGTTACAGTTAATTTATTATTCGATCTAATTAAAAATATAAAATAATTACAAAAAAATAACTTTAAATCCCGTAATTATAATTTTTTATATTTAATAAAATAATTAAAAAACGGTCAAATAGACTAAAAACTTACTTTAACACACAGTTTAATTATTACTTTCACAATTTAACGAAATATATATTTATAAATATTTCAAATAGATTTTTTTTATGATGTAATATTTAAAAAAATAAATTAAAATTTGTAGTGATTTTTTTTATTTATTAGTATGGAGCTCTAAGAAGGAAAATAGGAGGGACTTACAAGGACTTCTTCAAATCCTACATAGAAGGTAAGTAAAAATTTGTGTTTTATTTATTTATTTAAATTCATTATAATTATAAAAATAGGAAAATAAAATTGGGGTTTTGATGAAATTTAGTGGATGGGCAATACGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGGGGCGAGGCAAGACAAGTCGACAAGCTTGGACGATATGCTCATGTTGCTTGTTTGGAAAAATCCAATTCTTCATCGCCCAATTTCTTCACCAAATTCTTCTTCAAATGACTCTGATATCCCGTTTATACATACATCTGAATTTGTGTAGCGTGTATTTAAGTATCTCTCTAGTTAATTTTCACGATGAAATGATTATATTGTTCATTTTCTCTATAACAACATGTGTTTATATTCAAGTTGATAAAAAGGCAGAAAGTCAAACCTTTAACTCAATTGGGTCTAAAAATCGAGCAATTCACTTGTGGGTGGTGTGCGTTTTGCACAAACTATGGAAACCCAAGAAGGCCCAATTGTGTATTTTGTTCGCGTAGAGCCCCACATTAGTTAGTTA

mRNA sequence

ATGGTGGCGATTTCTCCATCAAACGTCGGATTCACATCACAATTCGGGCAGGGATGGAAGACGGCGAGGGAGATGACTCCCGTCAGAAGCTCGAATCTGAGAGTATCAGCAAAAGCGACGGAGAAGGGCGAGGAAAAAGAAGACGGCAGTGAAAGGAAGAACAAGCAGTCGCTGTTCAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGGTCGAGTCGCGACGCTGAGCTTCTCGAAGACGCCCGTCAGGCCACCAAATCCGGCGGTAGAATGAGCCAGGAACAGTATGGAGCTCTAAGAAGGAAAATAGGAGGGACTTACAAGGACTTCTTCAAATCCTACATAGAAGTGGATGGGCAATACGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGGGGCGAGGCAAGACAAGTCGACAAGCTTGGACGATATGCTCATGTTGCTTGTTTGGAAAAATCCAATTCTTCATCGCCCAATTTCTTCACCAAATTCTTCTTCAAATGACTCTGATATCCCGTTTATACATACATCTGAATTTGTGTAGCGTGTATTTAAGTATCTCTCTAGTTAATTTTCACGATGAAATGATTATATTGTTCATTTTCTCTATAACAACATGTGTTTATATTCAAGTTGATAAAAAGGCAGAAAGTCAAACCTTTAACTCAATTGGGTCTAAAAATCGAGCAATTCACTTGTGGGTGGTGTGCGTTTTGCACAAACTATGGAAACCCAAGAAGGCCCAATTGTGTATTTTGTTCGCGTAGAGCCCCACATTAGTTAGTTA

Coding sequence (CDS)

ATGGTGGCGATTTCTCCATCAAACGTCGGATTCACATCACAATTCGGGCAGGGATGGAAGACGGCGAGGGAGATGACTCCCGTCAGAAGCTCGAATCTGAGAGTATCAGCAAAAGCGACGGAGAAGGGCGAGGAAAAAGAAGACGGCAGTGAAAGGAAGAACAAGCAGTCGCTGTTCAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGGTCGAGTCGCGACGCTGAGCTTCTCGAAGACGCCCGTCAGGCCACCAAATCCGGCGGTAGAATGAGCCAGGAACAGTATGGAGCTCTAAGAAGGAAAATAGGAGGGACTTACAAGGACTTCTTCAAATCCTACATAGAAGTGGATGGGCAATACGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGGGGCGAGGCAAGACAAGTCGACAAGCTTGGACGATATGCTCATGTTGCTTGTTTGGAAAAATCCAATTCTTCATCGCCCAATTTCTTCACCAAATTCTTCTTCAAATGA

Protein sequence

MVAISPSNVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKEDGSERKNKQSLFSSVTEALDFSQVRSSRDAELLEDARQATKSGGRMSQEQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

Homology

[Close]

BLAST of CmaCh04G001110 vs. TrEMBL
Match: A0A0A0KM41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G220390 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-69
Identity = 143/176 (81.25%), Postives = 153/176 (86.93%), Query Frame = 1


Query: 1   MVAISPSNVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKEDGSERKNKQSLFS 60
           MVAI PS+ GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E G   +NK+SLFS
Sbjct: 1   MVAICPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVRA---EKGEERESGG-GENKKSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLEDARQATKSGGRMSQEQYGALRRKIGGTYKDFFKSYIEVD 120
           SVTEALDFS VRS+RDAELL+DARQATK+GGRMS+EQYGALRRKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSTRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 177
           GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSS  NFF+KFF K
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSPGNFFSKFFSK 172

[Close]

BLAST of CmaCh04G001110 vs. TrEMBL
Match: A0A0B0PRW3_GOSAR (Potassium transporter OS=Gossypium arboreum GN=F383_11745 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.2e-55
Identity = 115/141 (81.56%), Postives = 128/141 (90.78%), Query Frame = 1


Query: 34  RVSAKATEKGEEKEDGSERKNKQSLFSSVTEALDFSQVRSSRDAELLEDARQATKSGGRM 93
           RVSAK  E  +EKE+G ++K+KQSLFSSVTEALDFSQVRS +DAELL++AR+ATKSGGRM
Sbjct: 827 RVSAKQQETNDEKEEG-KKKSKQSLFSSVTEALDFSQVRSVQDAELLDEAREATKSGGRM 886

Query: 94  SQEQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY 153
           S+EQYGALRRKIGGTYKDFFKSY+EV+G+YVEEGWVDKTCKVCKKDTRGEARQVD  GRY
Sbjct: 887 SREQYGALRRKIGGTYKDFFKSYVEVNGEYVEEGWVDKTCKVCKKDTRGEARQVDNFGRY 946

Query: 154 AHVACLEKSNSSSPNFFTKFF 175
            HVACLEKSNS   NFFTK F
Sbjct: 947 VHVACLEKSNSG--NFFTKLF 964

[Close]

BLAST of CmaCh04G001110 vs. TrEMBL
Match: B9S4D0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0689480 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.2e-55
Identity = 120/169 (71.01%), Postives = 133/169 (78.70%), Query Frame = 1


Query: 6   PSNVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKEDGSERKNKQSLFSSVTEA 65
           PS   F  Q G G K   E    RS N RV AK+      KE+  + ++KQS FSSVTEA
Sbjct: 10  PSQTYFPRQAGVGQKNLSESRLQRSPNFRVFAKSENA---KEETKKSESKQSFFSSVTEA 69

Query: 66  LDFSQVRSSRDAELLEDARQATKSGGRMSQEQYGALRRKIGGTYKDFFKSYIEVDGQYVE 125
           LDFSQVRS +DAELLE+AR+ TKSGGRM++EQYGALRRKIGGTYKDFFKSYI+VDG YVE
Sbjct: 70  LDFSQVRSVKDAELLEEARENTKSGGRMTREQYGALRRKIGGTYKDFFKSYIDVDGAYVE 129

Query: 126 EGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFF 175
           EGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEK+NS   NFFT+ F
Sbjct: 130 EGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKANSG--NFFTRLF 173

[Close]

BLAST of CmaCh04G001110 vs. TrEMBL
Match: A0A0D2VU79_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G014100 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.3e-55
Identity = 114/141 (80.85%), Postives = 127/141 (90.07%), Query Frame = 1


Query: 34  RVSAKATEKGEEKEDGSERKNKQSLFSSVTEALDFSQVRSSRDAELLEDARQATKSGGRM 93
           RVSAK  E  +EKE+G ++K+KQSLFSSVTEALDFSQVRS +DAELL++AR+ATKSGGRM
Sbjct: 35  RVSAKQQETNDEKEEG-KKKSKQSLFSSVTEALDFSQVRSVKDAELLDEAREATKSGGRM 94

Query: 94  SQEQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY 153
           S+EQYGALRRKIGGTYKDFFKSY+EV+G+YVEEGWVDK CKVCKKDTRGEARQVD  GRY
Sbjct: 95  SREQYGALRRKIGGTYKDFFKSYVEVNGEYVEEGWVDKACKVCKKDTRGEARQVDNFGRY 154

Query: 154 AHVACLEKSNSSSPNFFTKFF 175
            HVACLEKSNS   NFFTK F
Sbjct: 155 VHVACLEKSNSG--NFFTKLF 172

[Close]

BLAST of CmaCh04G001110 vs. TrEMBL
Match: D7T4E9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02560 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.4e-54
Identity = 120/175 (68.57%), Postives = 136/175 (77.71%), Query Frame = 1


Query: 1   MVAISPSNVGFTSQFGQGWKTAREMTPVRSSN-LRVSAKATEKGEEKEDGSERKNKQSLF 60
           ++ +SPS+  F+   G      R     RSS  + VSAK  EK E +E    +K+KQSLF
Sbjct: 5   VLPLSPSHNSFSPNLGVAQTLPRHHRLSRSSKFVVVSAKVDEKNENEEP---KKSKQSLF 64

Query: 61  SSVTEALDFSQVRSSRDAELLEDARQATKSGGRMSQEQYGALRRKIGGTYKDFFKSYIEV 120
           SSVTEALDFSQVRS  DA+LLE AR AT+SGGRMS+EQYGALRRKIGGTYKDFFKSY++V
Sbjct: 65  SSVTEALDFSQVRSVEDAQLLEKARDATQSGGRMSREQYGALRRKIGGTYKDFFKSYVDV 124

Query: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFF 175
           DGQYVEEGWVDKTCKVCK+DTRGE RQVDK GRY HVACLEKSNS   NFFT+ F
Sbjct: 125 DGQYVEEGWVDKTCKVCKEDTRGEPRQVDKFGRYVHVACLEKSNSG--NFFTRLF 174

[Close]

BLAST of CmaCh04G001110 vs. TAIR10
Match: AT3G56290.1 (AT3G56290.1 unknown protein)

HSP 1 Score: 198.7 bits (504), Expect = 2.9e-51
Identity = 98/133 (73.68%), Postives = 116/133 (87.22%), Query Frame = 1


Query: 42  KGEEKEDGSERKNKQSLFSSVTEALDFSQVRSSRDAELLEDARQATKSGGRMSQEQYGAL 101
           K E+ ED  + + + SLF+ +T+ALDFSQVRS +DAELL +AR+ATKSG +M+QEQYGAL
Sbjct: 41  KQEKDEDKKKNEEETSLFTQLTDALDFSQVRSEKDAELLYEAREATKSGRKMTQEQYGAL 100

Query: 102 RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEK 161
           RRKIGGTYKDFFKSY+EVDGQYVEEGWVDKTCK+CKKDT+GEARQVDKLGRYAHV+CL+ 
Sbjct: 101 RRKIGGTYKDFFKSYVEVDGQYVEEGWVDKTCKICKKDTKGEARQVDKLGRYAHVSCLQ- 160

Query: 162 SNSSSPNFFTKFF 175
            N  S NFFT+ F
Sbjct: 161 -NPPSGNFFTRLF 171

[Close]

BLAST of CmaCh04G001110 vs. NCBI nr
Match: gi|449457415|ref|XP_004146444.1| (PREDICTED: uncharacterized protein LOC101211273 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 1.7e-69
Identity = 143/176 (81.25%), Postives = 153/176 (86.93%), Query Frame = 1


Query: 1   MVAISPSNVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKEDGSERKNKQSLFS 60
           MVAI PS+ GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E G   +NK+SLFS
Sbjct: 1   MVAICPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVRA---EKGEERESGG-GENKKSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLEDARQATKSGGRMSQEQYGALRRKIGGTYKDFFKSYIEVD 120
           SVTEALDFS VRS+RDAELL+DARQATK+GGRMS+EQYGALRRKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSTRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 177
           GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSS  NFF+KFF K
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSPGNFFSKFFSK 172

[Close]

BLAST of CmaCh04G001110 vs. NCBI nr
Match: gi|659114150|ref|XP_008456929.1| (PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 3.8e-69
Identity = 145/177 (81.92%), Postives = 154/177 (87.01%), Query Frame = 1


Query: 1   MVAISPSNVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKED-GSERKNKQSLF 60
           MVAISPS+ GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  G E  NK+SLF
Sbjct: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLF 60

Query: 61  SSVTEALDFSQVRSSRDAELLEDARQATKSGGRMSQEQYGALRRKIGGTYKDFFKSYIEV 120
           SSVTEALDFS VRSSRDAELL+DARQATK+GGRM++EQYGALRRKIGGTYKDFFKSYIEV
Sbjct: 61  SSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEV 120

Query: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 177
           DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Sbjct: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of CmaCh04G001110 vs. NCBI nr
Match: gi|255559659|ref|XP_002520849.1| (PREDICTED: uncharacterized protein LOC8259533 [Ricinus communis])

HSP 1 Score: 223.4 bits (568), Expect = 3.1e-55
Identity = 120/169 (71.01%), Postives = 133/169 (78.70%), Query Frame = 1


Query: 6   PSNVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKEDGSERKNKQSLFSSVTEA 65
           PS   F  Q G G K   E    RS N RV AK+      KE+  + ++KQS FSSVTEA
Sbjct: 10  PSQTYFPRQAGVGQKNLSESRLQRSPNFRVFAKSENA---KEETKKSESKQSFFSSVTEA 69

Query: 66  LDFSQVRSSRDAELLEDARQATKSGGRMSQEQYGALRRKIGGTYKDFFKSYIEVDGQYVE 125
           LDFSQVRS +DAELLE+AR+ TKSGGRM++EQYGALRRKIGGTYKDFFKSYI+VDG YVE
Sbjct: 70  LDFSQVRSVKDAELLEEARENTKSGGRMTREQYGALRRKIGGTYKDFFKSYIDVDGAYVE 129

Query: 126 EGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFF 175
           EGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEK+NS   NFFT+ F
Sbjct: 130 EGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKANSG--NFFTRLF 173

[Close]

BLAST of CmaCh04G001110 vs. NCBI nr
Match: gi|728848144|gb|KHG27587.1| (Potassium transporter 2 [Gossypium arboreum])

HSP 1 Score: 223.4 bits (568), Expect = 3.1e-55
Identity = 115/141 (81.56%), Postives = 128/141 (90.78%), Query Frame = 1


Query: 34  RVSAKATEKGEEKEDGSERKNKQSLFSSVTEALDFSQVRSSRDAELLEDARQATKSGGRM 93
           RVSAK  E  +EKE+G ++K+KQSLFSSVTEALDFSQVRS +DAELL++AR+ATKSGGRM
Sbjct: 827 RVSAKQQETNDEKEEG-KKKSKQSLFSSVTEALDFSQVRSVQDAELLDEAREATKSGGRM 886

Query: 94  SQEQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY 153
           S+EQYGALRRKIGGTYKDFFKSY+EV+G+YVEEGWVDKTCKVCKKDTRGEARQVD  GRY
Sbjct: 887 SREQYGALRRKIGGTYKDFFKSYVEVNGEYVEEGWVDKTCKVCKKDTRGEARQVDNFGRY 946

Query: 154 AHVACLEKSNSSSPNFFTKFF 175
            HVACLEKSNS   NFFTK F
Sbjct: 947 VHVACLEKSNSG--NFFTKLF 964

[Close]

BLAST of CmaCh04G001110 vs. NCBI nr
Match: gi|823252789|ref|XP_012459009.1| (PREDICTED: uncharacterized protein LOC105779678 [Gossypium raimondii])

HSP 1 Score: 221.9 bits (564), Expect = 9.1e-55
Identity = 114/141 (80.85%), Postives = 127/141 (90.07%), Query Frame = 1


Query: 34  RVSAKATEKGEEKEDGSERKNKQSLFSSVTEALDFSQVRSSRDAELLEDARQATKSGGRM 93
           RVSAK  E  +EKE+G ++K+KQSLFSSVTEALDFSQVRS +DAELL++AR+ATKSGGRM
Sbjct: 35  RVSAKQQETNDEKEEG-KKKSKQSLFSSVTEALDFSQVRSVKDAELLDEAREATKSGGRM 94

Query: 94  SQEQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY 153
           S+EQYGALRRKIGGTYKDFFKSY+EV+G+YVEEGWVDK CKVCKKDTRGEARQVD  GRY
Sbjct: 95  SREQYGALRRKIGGTYKDFFKSYVEVNGEYVEEGWVDKACKVCKKDTRGEARQVDNFGRY 154

Query: 154 AHVACLEKSNSSSPNFFTKFF 175
            HVACLEKSNS   NFFTK F
Sbjct: 155 VHVACLEKSNSG--NFFTKLF 172

The following BLAST results are available for this feature:

BLAST of CmaCh04G001110 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh04G001110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM41_CUCSA	1.2e-69	81.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G220390 PE=4 SV=1	[more]
A0A0B0PRW3_GOSAR	2.2e-55	81.56	Potassium transporter OS=Gossypium arboreum GN=F383_11745 PE=3 SV=1	[more]
B9S4D0_RICCO	2.2e-55	71.01	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0689480 PE=4 SV=1	[more]
A0A0D2VU79_GOSRA	6.3e-55	80.85	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G014100 PE=4 SV=1	[more]
D7T4E9_VITVI	2.4e-54	68.57	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02560 PE=4 SV=...	[more]

BLAST of CmaCh04G001110 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56290.1	2.9e-51	73.68	unknown protein	[more]

BLAST of CmaCh04G001110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457415\|ref\|XP_004146444.1\|	1.7e-69	81.25	PREDICTED: uncharacterized protein LOC101211273 [Cucumis sativus]	[more]
gi\|659114150\|ref\|XP_008456929.1\|	3.8e-69	81.92	PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo]	[more]
gi\|255559659\|ref\|XP_002520849.1\|	3.1e-55	71.01	PREDICTED: uncharacterized protein LOC8259533 [Ricinus communis]	[more]
gi\|728848144\|gb\|KHG27587.1\|	3.1e-55	81.56	Potassium transporter 2 [Gossypium arboreum]	[more]
gi\|823252789\|ref\|XP_012459009.1\|	9.1e-55	80.85	PREDICTED: uncharacterized protein LOC105779678 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0071805	potassium ion transmembrane transport
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0015079	potassium ion transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G001110.1	CmaCh04G001110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36771	FAMILY NOT NAMED	coord: 1..176 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G001110	Cucsa.144050	Cucumber (Gy14) v1	cgycmaB0401
CmaCh04G001110	Cla007279	Watermelon (97103) v1	cmawmB691
CmaCh04G001110	Csa5G220390	Cucumber (Chinese Long) v2	cmacuB747
CmaCh04G001110	MELO3C020131	Melon (DHL92) v3.5.1	cmameB643
CmaCh04G001110	ClCG07G004950	Watermelon (Charleston Gray)	cmawcgB674
CmaCh04G001110	CSPI05G11430	Wild cucumber (PI 183967)	cmacpiB757
CmaCh04G001110	CmoCh04G001080	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G001110	MELO3C020131.2	Melon (DHL92) v3.6.1	cmamedB743
CmaCh04G001110	CsaV3_5G010830	Cucumber (Chinese Long) v3	cmacucB0883
CmaCh04G001110	Cla97C07G133330	Watermelon (97103) v2	cmawmbB781
CmaCh04G001110	Bhi07G000428	Wax gourd	cmawgoB0890
CmaCh04G001110	CsGy5G008690	Cucumber (Gy14) v2	cgybcmaB674
CmaCh04G001110	Carg24481	Silver-seed gourd	carcmaB1249

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G001110	Watermelon (97103) v2	cmawmbB729
CmaCh04G001110	Wax gourd	cmawgoB0865
CmaCh04G001110	Cucurbita maxima (Rimu)	cmacmaB274
CmaCh04G001110	Cucurbita maxima (Rimu)	cmacmaB531
CmaCh04G001110	Cucurbita maxima (Rimu)	cmacmaB534
CmaCh04G001110	Cucurbita maxima (Rimu)	cmacmaB543
CmaCh04G001110	Cucurbita moschata (Rifu)	cmacmoB683
CmaCh04G001110	Cucurbita moschata (Rifu)	cmacmoB730
CmaCh04G001110	Cucurbita moschata (Rifu)	cmacmoB736
CmaCh04G001110	Cucurbita moschata (Rifu)	cmacmoB751
CmaCh04G001110	Wild cucumber (PI 183967)	cmacpiB784
CmaCh04G001110	Cucumber (Chinese Long) v2	cmacuB774
CmaCh04G001110	Watermelon (Charleston Gray)	cmawcgB625
CmaCh04G001110	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G001110	Cucurbita pepo (Zucchini)	cmacpeB722
CmaCh04G001110	Cucurbita pepo (Zucchini)	cmacpeB746
CmaCh04G001110	Cucurbita pepo (Zucchini)	cmacpeB758
CmaCh04G001110	Bottle gourd (USVL1VR-Ls)	cmalsiB660
CmaCh04G001110	Bottle gourd (USVL1VR-Ls)	cmalsiB671
CmaCh04G001110	Cucumber (Gy14) v2	cgybcmaB842
CmaCh04G001110	Silver-seed gourd	carcmaB0214
CmaCh04G001110	Silver-seed gourd	carcmaB0949
CmaCh04G001110	Silver-seed gourd	carcmaB1385
CmaCh04G001110	Cucumber (Chinese Long) v3	cmacucB0913