Cla007279 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla007279
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Homology to unknown gene (AHRD V1 -- Q00SR8_OSTTA)
Location	Chr7 : 6224146 .. 6226522 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCGATTTCTCCGTCCCACGGCGGGTTCCCATCGCAATTAGGGCAGGGGTGGAAGGCGTTAAGGGGGAGGCCTGATAGGAACTCCAATTTGAGAATATTGGCGAAAGCGGCAGAGAAGGGCGAGGAGAGAGAAAGCGGCGGCGGCGGAGAGAATAAGAAATCGCTGTTCAGCAGCGTGACGGAGGCGTTAGATTTCTCTGCCGTGCGATCGAGTCGCGACGCCGAGCTCCTCGATGATGCCCGTCAGGCCACCAAAGCCGGCGGCAGAATGACCCGGGAACAGGTACTTGTTTGTTGCTTACAGTTAATTTGTTATTGATTAAATTATCAAAAACAAATTTGTTTCAAATATTCCCAACTTCGAAAATTTTCATTTTAGTTTGATATTGTTTCCGAATAATAGATGTATATTTATTTATTTATTTATTTTTTAGTATAACAACTCCGATGATAGGTCAAGACTTTTGCCGTTGCATTCATCGGTAGATATGAACAAACCTTAACACATAGGAAATAATAATAATAATAATAAATTTACATAGCATTTGTGAACTATATATGTTGTTGATTTCTTCATTTCAACCCTCTACAATTTTTCTTCTGATTTCTTTTTATGGACACTAACCTCCAAAATACTTTTGGTATGTATTTAAATTTGTTTACATAAAAAATATAAACAGATATAAAATTTCTAGTCGATGAACCTAACGATAAAAGTCTCAATGATTGTTTTGAAACAATCTTCTAATTCAAGAGTTAAAATGAAATCCTTTCAAATTTGGATATATGATTGCAACTATATACATATTTCAATGATATTTTTGATAATTTAGCCTTTAGTAATTGATTTAATTGGAAAATATTACAAGATTGTTTTTCTAGAATAACAATTTGTCCCAAACTTTTGCAGAGTTAATAATTTAGTTCATAAAATTTGAACATTAACTACGAAGAAAAATAAAAAAAGAGTACATATTTATTACTATTGAGCTAAACTCGTGTTTGTTGAGTCAATAAACTTTAGTTTGTAACACTATAACTTTTGATTTCATAACAATTTTAATTAATTCTTCATTTTAGTCTTGGTTGTGTAAATCTTACAAATATCTTAAGAAATTTCCTACCTGCATTGATTAATGAACTTATTAGTAACCAAATATGTATTTCTCTGCCAATGTGAGACTAGGTCAATGTAATTGACATCATTTTCCATTTTAGAAGTGGAAAGTTTAATTCCTCGTCTCCATAGTTGTTGTACTAAAAAAAATATGTATCTCTATTATGTTTTTCAAATTTTATCTCTAATTGATCTTTAAATTTTAAAAGCATTTAATAAGGTTTTGAAATCTTCTCGTAACGTTAACCTTAAAAAATATATTATATTGTAAATATTTTAGGAACCAACATTCTTCAACCACTTACACAATTTTGTTGTAGTAATATAATTGTCTAAAATGGTCTTCTACATTATGTATGGTTTGGATGCAGTATGGAGCTTTAAGAAGGAAAATAGGAGGGACTTACAAGGACTTCTTCAAATCTTACATAGAAGGTATGTTATCAACATAAAAAAATTTTATAATATAAAATATAAATCTATACTCTTAAACTTTAAGGCTTGCGTATCAACTGAAATCATCGTAAATGTATCAATCTATACTCTCCATTATGTTTCATATAAATAAGAAATTGACTTACAACTTTACCAACTACACTTCTAAACATTCATAGGTGAATCAATTGAGACTCTCTCCATTTAGGAATTTCTTTTGAAAATTGTCCATCTATTTATCCTATTTTGTAAATCCGACAATTGAAGAAGTTTTTACATGTGTAAGAATTGATACATGGATGATTTTCAAAGGTATCTTAACAAATGGTCTAAATTAATTCATTTAGGAAAATTTAGTAGCCTATGAATTGATAGAATTATGAACCAAACATGATATTTTTCAAATGAAATATGAATTATGGTGTAAATTAGTAAACTTACTAAAGTTTAGGGTTAGAAATTGATATAATTATTAGTTTAGAGTTTTAATGGATACAAGCCCAAAAGTTTTAGGGTATTATTGATTTTTTCATTTTATTTATTTTATTTTATTGTTTTTGTCTAAATAAAAGATTCAAAACCTATGTTAACTCATAATCAAAATTGATGAAAAATATTTGGTTGTTTGAATGGATGAAAAATAGTGGATGGGCAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAGGGGGAGAAGCAAGACAAGTTGACAAACTTGGAAGATACGTACATGTTGCTTGTTTGGAGAAATCCAACTCTTCCCCACGGAATTTCTTCTCCAAGCTCTTCTCCAAATGA

mRNA sequence

ATGGTGGCGATTTCTCCGTCCCACGGCGGGTTCCCATCGCAATTAGGGCAGGGGTGGAAGGCGTTAAGGGGGAGGCCTGATAGGAACTCCAATTTGAGAATATTGGCGAAAGCGGCAGAGAAGGGCGAGGAGAGAGAAAGCGGCGGCGGCGGAGAGAATAAGAAATCGCTGTTCAGCAGCGTGACGGAGGCGTTAGATTTCTCTGCCGTGCGATCGAGTCGCGACGCCGAGCTCCTCGATGATGCCCGTCAGGCCACCAAAGCCGGCGGCAGAATGACCCGGGAACAGTATGGAGCTTTAAGAAGGAAAATAGGAGGGACTTACAAGGACTTCTTCAAATCTTACATAGAAGTGGATGGGCAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAGGGGGAGAAGCAAGACAAGTTGACAAACTTGGAAGATACGTACATGTTGCTTGTTTGGAGAAATCCAACTCTTCCCCACGGAATTTCTTCTCCAAGCTCTTCTCCAAATGA

Coding sequence (CDS)

ATGGTGGCGATTTCTCCGTCCCACGGCGGGTTCCCATCGCAATTAGGGCAGGGGTGGAAGGCGTTAAGGGGGAGGCCTGATAGGAACTCCAATTTGAGAATATTGGCGAAAGCGGCAGAGAAGGGCGAGGAGAGAGAAAGCGGCGGCGGCGGAGAGAATAAGAAATCGCTGTTCAGCAGCGTGACGGAGGCGTTAGATTTCTCTGCCGTGCGATCGAGTCGCGACGCCGAGCTCCTCGATGATGCCCGTCAGGCCACCAAAGCCGGCGGCAGAATGACCCGGGAACAGTATGGAGCTTTAAGAAGGAAAATAGGAGGGACTTACAAGGACTTCTTCAAATCTTACATAGAAGTGGATGGGCAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAGGGGGAGAAGCAAGACAAGTTGACAAACTTGGAAGATACGTACATGTTGCTTGTTTGGAGAAATCCAACTCTTCCCCACGGAATTTCTTCTCCAAGCTCTTCTCCAAATGA

Protein sequence

MVAISPSHGGFPSQLGQGWKALRGRPDRNSNLRILAKAAEKGEERESGGGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTGGEARQVDKLGRYVHVACLEKSNSSPRNFFSKLFSK

Homology

[Close]

BLAST of Cla007279 vs. TrEMBL
Match: A0A0A0KM41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G220390 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 9.3e-83
Identity = 160/176 (90.91%), Postives = 166/176 (94.32%), Query Frame = 1


Query: 1   MVAISPSHGGFPSQLGQGWKALRGRPDR-NSNLRILAKAAEKGEERESGGGGENKKSLFS 60
           MVAI PSHGGFPSQLGQGWK++RGRPDR +SNLR+    AEKGEERESGGG ENKKSLFS
Sbjct: 1   MVAICPSHGGFPSQLGQGWKSVRGRPDRRSSNLRV---RAEKGEERESGGG-ENKKSLFS 60

Query: 61  SVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVD 120
           SVTEALDFSAVRS+RDAELLDDARQATKAGGRM+REQYGALRRKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSTRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GQYVEEGWVDKTCKVCKKDTGGEARQVDKLGRYVHVACLEKSNSSPRNFFSKLFSK 176
           GQYVEEGWVDKTCKVCKKDT GEARQVDKLGRYVHVACLEKSNSSP NFFSK FSK
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSPGNFFSKFFSK 172

[Close]

BLAST of Cla007279 vs. TrEMBL
Match: B9S4D0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0689480 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.3e-57
Identity = 120/171 (70.18%), Postives = 136/171 (79.53%), Query Frame = 1


Query: 6   PSHGGFPSQLGQGWKAL-RGRPDRNSNLRILAKAAEKGEERESGGGGENKKSLFSSVTEA 65
           PS   FP Q G G K L   R  R+ N R+ AK+    EE +     E+K+S FSSVTEA
Sbjct: 10  PSQTYFPRQAGVGQKNLSESRLQRSPNFRVFAKSENAKEETKKS---ESKQSFFSSVTEA 69

Query: 66  LDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVE 125
           LDFS VRS +DAELL++AR+ TK+GGRMTREQYGALRRKIGGTYKDFFKSYI+VDG YVE
Sbjct: 70  LDFSQVRSVKDAELLEEARENTKSGGRMTREQYGALRRKIGGTYKDFFKSYIDVDGAYVE 129

Query: 126 EGWVDKTCKVCKKDTGGEARQVDKLGRYVHVACLEKSNSSPRNFFSKLFSK 176
           EGWVDKTCKVCKKDT GEARQVDKLGRYVHVACLEK+NS   NFF++LFS+
Sbjct: 130 EGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKANSG--NFFTRLFSR 175

[Close]

BLAST of Cla007279 vs. TrEMBL
Match: M5X2I2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012213mg PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.4e-56
Identity = 116/174 (66.67%), Postives = 138/174 (79.31%), Query Frame = 1


Query: 4   ISPSHGGFPSQLGQGWKALRGRP---DRNSNLRILAKAAEKGEERESGGGGENKKSLFSS 63
           ++P HG FPS  G   + L  R     ++S  R+LAK  EKGE+ +     + K+SLFSS
Sbjct: 9   LTPPHGKFPSNFGVA-ECLSNRGGFVSKSSQFRVLAKT-EKGEKGDKEEPKKTKQSLFSS 68

Query: 64  VTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 123
           VTEALDFS  RS+ DA L++DAR+ATK+G +M+REQYGALRRKIGGTYKDFFKSY++VDG
Sbjct: 69  VTEALDFSQTRSAEDALLIEDAREATKSGEKMSREQYGALRRKIGGTYKDFFKSYVDVDG 128

Query: 124 QYVEEGWVDKTCKVCKKDTGGEARQVDKLGRYVHVACLEKSNSSPRNFFSKLFS 175
           QYVEEGWVDKTCKVCKKDTGGE RQVDKLGRYVHVAC+EKS S   NFF++LFS
Sbjct: 129 QYVEEGWVDKTCKVCKKDTGGEPRQVDKLGRYVHVACMEKSKSG--NFFTRLFS 178

[Close]

BLAST of Cla007279 vs. TrEMBL
Match: B9IQ43_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08420g PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.8e-55
Identity = 113/171 (66.08%), Postives = 135/171 (78.95%), Query Frame = 1


Query: 4   ISPSHGGFPSQLGQGWKALRGRPDRNSNLRILAKAAEKGEERESGGGGENKKSLFSSVTE 63
           +SPS   FP  +G        RP+++ N +I AK  E G E E     ++K+SLFSSV E
Sbjct: 8   LSPSRNCFPPHVGIAQNLSNYRPNKSFNFKISAKT-ESGNEEEPK---KSKQSLFSSVAE 67

Query: 64  ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV 123
           ALDFS VRS++DAELL++AR+ T +GGRMTREQYGALRRKIGGTYKDFFKSY++VDGQYV
Sbjct: 68  ALDFSQVRSAKDAELLEEARENTSSGGRMTREQYGALRRKIGGTYKDFFKSYVDVDGQYV 127

Query: 124 EEGWVDKTCKVCKKDTGGEARQVDKLGRYVHVACLEKSNSSPRNFFSKLFS 175
           EEGWVDKTCKVCKKDT G+ RQVDKLGRYVHV C+EK+NS   NFF++LFS
Sbjct: 128 EEGWVDKTCKVCKKDTSGDPRQVDKLGRYVHVECMEKANSG--NFFTRLFS 172

[Close]

BLAST of Cla007279 vs. TrEMBL
Match: A0A068UZF3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039062001 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.7e-55
Identity = 111/171 (64.91%), Postives = 129/171 (75.44%), Query Frame = 1


Query: 4   ISPSHGGFPSQLGQGWKALRGRPDRNSNLRILAKAAEKGEERESGGGGENKKSLFSSVTE 63
           +SPS  GF        K  R    R+ N   ++   E     E  G  E K+SLFSSVTE
Sbjct: 8   LSPSQNGFLGNAAVAPKVFRYHSSRSCNFIAVSAKNESASTEEEAGNTEKKQSLFSSVTE 67

Query: 64  ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV 123
           ALDFS VRS++DAELL++AR++T++GGRM++EQYGALRRKIGGTYKDFFKSYI+VDGQYV
Sbjct: 68  ALDFSQVRSAKDAELLEEARESTRSGGRMSKEQYGALRRKIGGTYKDFFKSYIDVDGQYV 127

Query: 124 EEGWVDKTCKVCKKDTGGEARQVDKLGRYVHVACLEKSNSSPRNFFSKLFS 175
           EEGWVDKTCKVCKKDT GE RQVDK GRYVHV CLEKS S   NFF++LFS
Sbjct: 128 EEGWVDKTCKVCKKDTRGEPRQVDKFGRYVHVECLEKSKSG--NFFTRLFS 176

[Close]

BLAST of Cla007279 vs. NCBI nr
Match: gi|659114150|ref|XP_008456929.1| (PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 7.8e-83
Identity = 162/176 (92.05%), Postives = 167/176 (94.89%), Query Frame = 1


Query: 1   MVAISPSHGGFPSQLGQGWKALRGRPDR-NSNLRILAKAAEKGEERESGGGGENKKSLFS 60
           MVAISPSHGGFPSQLGQGWK++RGRPDR +SNLR++A   EKGEERES GG ENKKSLFS
Sbjct: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGG-ENKKSLFS 60

Query: 61  SVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVD 120
           SVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GQYVEEGWVDKTCKVCKKDTGGEARQVDKLGRYVHVACLEKSNSSPRNFFSKLFSK 176
           GQYVEEGWVDKTCKVCKKDT GEARQVDKLGRYVHVACLEKSNSS  NFFSKLFSK
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of Cla007279 vs. NCBI nr
Match: gi|449457415|ref|XP_004146444.1| (PREDICTED: uncharacterized protein LOC101211273 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-82
Identity = 160/176 (90.91%), Postives = 166/176 (94.32%), Query Frame = 1


Query: 1   MVAISPSHGGFPSQLGQGWKALRGRPDR-NSNLRILAKAAEKGEERESGGGGENKKSLFS 60
           MVAI PSHGGFPSQLGQGWK++RGRPDR +SNLR+    AEKGEERESGGG ENKKSLFS
Sbjct: 1   MVAICPSHGGFPSQLGQGWKSVRGRPDRRSSNLRV---RAEKGEERESGGG-ENKKSLFS 60

Query: 61  SVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVD 120
           SVTEALDFSAVRS+RDAELLDDARQATKAGGRM+REQYGALRRKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSTRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GQYVEEGWVDKTCKVCKKDTGGEARQVDKLGRYVHVACLEKSNSSPRNFFSKLFSK 176
           GQYVEEGWVDKTCKVCKKDT GEARQVDKLGRYVHVACLEKSNSSP NFFSK FSK
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSPGNFFSKFFSK 172

[Close]

BLAST of Cla007279 vs. NCBI nr
Match: gi|255559659|ref|XP_002520849.1| (PREDICTED: uncharacterized protein LOC8259533 [Ricinus communis])

HSP 1 Score: 229.9 bits (585), Expect = 3.3e-57
Identity = 120/171 (70.18%), Postives = 136/171 (79.53%), Query Frame = 1


Query: 6   PSHGGFPSQLGQGWKAL-RGRPDRNSNLRILAKAAEKGEERESGGGGENKKSLFSSVTEA 65
           PS   FP Q G G K L   R  R+ N R+ AK+    EE +     E+K+S FSSVTEA
Sbjct: 10  PSQTYFPRQAGVGQKNLSESRLQRSPNFRVFAKSENAKEETKKS---ESKQSFFSSVTEA 69

Query: 66  LDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVE 125
           LDFS VRS +DAELL++AR+ TK+GGRMTREQYGALRRKIGGTYKDFFKSYI+VDG YVE
Sbjct: 70  LDFSQVRSVKDAELLEEARENTKSGGRMTREQYGALRRKIGGTYKDFFKSYIDVDGAYVE 129

Query: 126 EGWVDKTCKVCKKDTGGEARQVDKLGRYVHVACLEKSNSSPRNFFSKLFSK 176
           EGWVDKTCKVCKKDT GEARQVDKLGRYVHVACLEK+NS   NFF++LFS+
Sbjct: 130 EGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKANSG--NFFTRLFSR 175

[Close]

BLAST of Cla007279 vs. NCBI nr
Match: gi|1009121646|ref|XP_015877570.1| (PREDICTED: uncharacterized protein LOC107414004 [Ziziphus jujuba])

HSP 1 Score: 228.4 bits (581), Expect = 9.6e-57
Identity = 118/172 (68.60%), Postives = 137/172 (79.65%), Query Frame = 1


Query: 4   ISPSHGGFPSQLGQGWKALRGRPDRNSNLRILAKAAEKGEERESGGGGENKKSLFSSVTE 63
           ++P+HG     L        G   + S  R+LAK  +KG + ES    ++K+SLFSSVTE
Sbjct: 8   LTPTHGNLLPNLRVSQLPNHGFNPKGSKFRVLAKQ-DKGNKEES----KSKQSLFSSVTE 67

Query: 64  ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV 123
           ALDFS VRS++DAELL +AR+ATK+GGRM REQYGALRRKIGGTYKDFFKSY+EVDGQYV
Sbjct: 68  ALDFSQVRSAQDAELLQEAREATKSGGRMNREQYGALRRKIGGTYKDFFKSYVEVDGQYV 127

Query: 124 EEGWVDKTCKVCKKDTGGEARQVDKLGRYVHVACLEKSNSSPRNFFSKLFSK 176
           EEGWVDKTCKVCKKDT GE RQVDKLGRYVHVACLEKSNS   NFF++LFS+
Sbjct: 128 EEGWVDKTCKVCKKDTAGEPRQVDKLGRYVHVACLEKSNSG--NFFTRLFSR 172

[Close]

BLAST of Cla007279 vs. NCBI nr
Match: gi|743912689|ref|XP_011000232.1| (PREDICTED: uncharacterized protein LOC105107863 [Populus euphratica])

HSP 1 Score: 226.5 bits (576), Expect = 3.7e-56
Identity = 115/173 (66.47%), Postives = 137/173 (79.19%), Query Frame = 1


Query: 2   VAISPSHGGFPSQLGQGWKALRGRPDRNSNLRILAKAAEKGEERESGGGGENKKSLFSSV 61
           +A+SPS   FP  +G        RP+++ N +I AK  E G E E     ++K+SLFSSV
Sbjct: 6   LALSPSRNCFPPHVGVAQNLSNYRPNKSFNFKISAKT-ESGNEEEPK---KSKQSLFSSV 65

Query: 62  TEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQ 121
            EALDFS VRS++DAELL++AR+ T +GGRMTREQYGALRRKIGGTYKDFFKSY++VDGQ
Sbjct: 66  AEALDFSQVRSAKDAELLEEARENTSSGGRMTREQYGALRRKIGGTYKDFFKSYVDVDGQ 125

Query: 122 YVEEGWVDKTCKVCKKDTGGEARQVDKLGRYVHVACLEKSNSSPRNFFSKLFS 175
           YVEEGWVDKTCKVCKKDT GE RQVDKLGRYVHV C+EK+NS   NFF++LFS
Sbjct: 126 YVEEGWVDKTCKVCKKDTSGEPRQVDKLGRYVHVECMEKANSG--NFFTRLFS 172

The following BLAST results are available for this feature:

BLAST of Cla007279 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM41_CUCSA	9.3e-83	90.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G220390 PE=4 SV=1	[more]
B9S4D0_RICCO	2.3e-57	70.18	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0689480 PE=4 SV=1	[more]
M5X2I2_PRUPE	7.4e-56	66.67	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012213mg PE=4 SV=1	[more]
B9IQ43_POPTR	2.8e-55	66.08	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08420g PE=4 SV=1	[more]
A0A068UZF3_COFCA	3.7e-55	64.91	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039062001 PE=4 SV=1	[more]

BLAST of Cla007279 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114150\|ref\|XP_008456929.1\|	7.8e-83	92.05	PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo]	[more]
gi\|449457415\|ref\|XP_004146444.1\|	1.3e-82	90.91	PREDICTED: uncharacterized protein LOC101211273 [Cucumis sativus]	[more]
gi\|255559659\|ref\|XP_002520849.1\|	3.3e-57	70.18	PREDICTED: uncharacterized protein LOC8259533 [Ricinus communis]	[more]
gi\|1009121646\|ref\|XP_015877570.1\|	9.6e-57	68.60	PREDICTED: uncharacterized protein LOC107414004 [Ziziphus jujuba]	[more]
gi\|743912689\|ref\|XP_011000232.1\|	3.7e-56	66.47	PREDICTED: uncharacterized protein LOC105107863 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0006811	ion transport
biological_process	GO:0006813	potassium ion transport
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0015079	potassium ion transmembrane transporter activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU69178	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla007279	Cla007279.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU69178	WMU69178	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36771	FAMILY NOT NAMED	coord: 1..175 score: 5.4
None	No IPR available	PANTHER	PTHR36771:SF1	SUBFAMILY NOT NAMED	coord: 1..175 score: 5.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla007279	Cla97C07G133330	Watermelon (97103) v2	wmwmbB167
Cla007279	Csa5G220390	Cucumber (Chinese Long) v2	cuwmB387
Cla007279	MELO3C020131	Melon (DHL92) v3.5.1	mewmB056
Cla007279	ClCG07G004950	Watermelon (Charleston Gray)	wcgwmB365
Cla007279	CSPI05G11430	Wild cucumber (PI 183967)	cpiwmB395
Cla007279	Cucsa.144050	Cucumber (Gy14) v1	cgywmB253
Cla007279	CmaCh04G001110	Cucurbita maxima (Rimu)	cmawmB691
Cla007279	CmoCh04G001080	Cucurbita moschata (Rifu)	cmowmB685
Cla007279	CsGy5G008690	Cucumber (Gy14) v2	cgybwmB359
Cla007279	MELO3C020131.2	Melon (DHL92) v3.6.1	medwmB053
Cla007279	Carg24481	Silver-seed gourd	carwmB0910
Cla007279	CsaV3_5G010830	Cucumber (Chinese Long) v3	cucwmB410
Cla007279	Bhi07G000428	Wax gourd	wgowmB548

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla007279	Wax gourd	wgowmB328
Cla007279	Cucurbita maxima (Rimu)	cmawmB690
Cla007279	Cucurbita moschata (Rifu)	cmowmB255
Cla007279	Cucurbita moschata (Rifu)	cmowmB684
Cla007279	Watermelon (Charleston Gray)	wcgwmB094
Cla007279	Cucumber (Chinese Long) v2	cuwmB488
Cla007279	Cucurbita pepo (Zucchini)	cpewmB177
Cla007279	Cucurbita pepo (Zucchini)	cpewmB417
Cla007279	Cucurbita pepo (Zucchini)	cpewmB418
Cla007279	Bottle gourd (USVL1VR-Ls)	lsiwmB253
Cla007279	Bottle gourd (USVL1VR-Ls)	lsiwmB306
Cla007279	Cucumber (Gy14) v2	cgybwmB455
Cla007279	Silver-seed gourd	carwmB0254
Cla007279	Silver-seed gourd	carwmB0667
Cla007279	Cucumber (Chinese Long) v3	cucwmB511
Cla007279	Watermelon (97103) v2	wmwmbB152