Carg24481 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24481
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Potassium transporter
Location	Cucurbita_argyrosperma_scaffold_303 : 105771 .. 106750 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCGATTTCTCCATCGCACGTCGGATTCACATCGCAATTCGGGCAGGGATGGAAGACGGCGAGGGAGATGACTCCCGTCAGAAGCTCGAATCTGAGAGTATCAGCGAAATCGACGGAGAAGGGCGAGGAGAAAGAAGACGGCGGTGAAAGGAAGAACAAGCAGTCACTGTTTAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGGTCGAGTCGCGACGCTGAGCTTCTCGATGACGCCCGCCAGGCCACCAAAGCCGGCGGTAGAATGAGCCGGGAACAGGTAAAAACGTTAGTTAAAGTTAATTTATTATTCGGTCTAATTAAAAATATAAAATAATTACAAAAAAATAACTTTAACACATAATTTAATTATTACTTTCACAATTTAACGAAAAATATATTTATAAATATTTCAAATAGATTTTTGTTTATGACGTAATATTACAAAAAAAAAAAATTAAAATTTGTAGTGATTTTTTTTTTTATGACGTAGTATGGAGCTCTAAGAAGGAAAATAGGAGGGACTTACAAGGACTTCTTCAAATCCTACATAGAAGGTAAGTAAAAATTTATGTTATGTTATTTATTTATTTAAATTAATTATAATTATAAAAATAGGAAAATAAAATTGGGGTTTCGATGAAATTTAGTGGATGGGCAATACGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGGGGCGAGGCAAGACAAGTCGACAAGCTTGGGCGATATGCTCATGTTGCTTGTTTGGAAAAATCCAATTCTTCATCGCCCAATTTCTTCACCAAATTCTTCTTCAAATGACTCATAAATCCCGAGTATACATACATTTGAATTTGTGTAGCGTGTATTTAAGCATCTCTCTATAGTTAATTTTCACGATGAAATGATTATATTCTTCATTTTCTCTGTACAATGTATTTATACTTAAATTGACAGAAAGACGA

mRNA sequence

ATGGTGGCGATTTCTCCATCGCACGTCGGATTCACATCGCAATTCGGGCAGGGATGGAAGACGGCGAGGGAGATGACTCCCGTCAGAAGCTCGAATCTGAGAGTATCAGCGAAATCGACGGAGAAGGGCGAGGAGAAAGAAGACGGCGGTGAAAGGAAGAACAAGCAGTCACTGTTTAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGGTCGAGTCGCGACGCTGAGCTTCTCGATGACGCCCGCCAGGCCACCAAAGCCGGCGGTAGAATGAGCCGGGAACAGTATGGAGCTCTAAGAAGGAAAATAGGAGGGACTTACAAGGACTTCTTCAAATCCTACATAGAAGTGGATGGGCAATACGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGGGGCGAGGCAAGACAAGTCGACAAGCTTGGGCGATATGCTCATGTTGCTTGTTTGGAAAAATCCAATTCTTCATCGCCCAATTTCTTCACCAAATTCTTCTTCAAATGACTCATAAATCCCGAGTATACATACATTTGAATTTGTGTAGCGTGTATTTAAGCATCTCTCTATAGTTAATTTTCACGATGAAATGATTATATTCTTCATTTTCTCTGTACAATGTATTTATACTTAAATTGACAGAAAGACGA

Coding sequence (CDS)

ATGGTGGCGATTTCTCCATCGCACGTCGGATTCACATCGCAATTCGGGCAGGGATGGAAGACGGCGAGGGAGATGACTCCCGTCAGAAGCTCGAATCTGAGAGTATCAGCGAAATCGACGGAGAAGGGCGAGGAGAAAGAAGACGGCGGTGAAAGGAAGAACAAGCAGTCACTGTTTAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGGTCGAGTCGCGACGCTGAGCTTCTCGATGACGCCCGCCAGGCCACCAAAGCCGGCGGTAGAATGAGCCGGGAACAGTATGGAGCTCTAAGAAGGAAAATAGGAGGGACTTACAAGGACTTCTTCAAATCCTACATAGAAGTGGATGGGCAATACGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGGGGCGAGGCAAGACAAGTCGACAAGCTTGGGCGATATGCTCATGTTGCTTGTTTGGAAAAATCCAATTCTTCATCGCCCAATTTCTTCACCAAATTCTTCTTCAAATGA

Protein sequence

MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

Homology

[Close]

BLAST of Carg24481 vs. NCBI nr
Match: XP_022941869.1 (uncharacterized protein LOC111447101 [Cucurbita moschata])

HSP 1 Score: 349.0 bits (894), Expect = 9.6e-93
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFS 60
           MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFS
Sbjct: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120
           SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 177
           GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 176

[Close]

BLAST of Carg24481 vs. NCBI nr
Match: XP_023532465.1 (uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.5 bits (885), Expect = 1.1e-91
Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFS 60
           MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAK+TEKGEEKED GERKNKQSLFS
Sbjct: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKEDAGERKNKQSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120
           SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 177
           GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 176

[Close]

BLAST of Carg24481 vs. NCBI nr
Match: XP_022996627.1 (uncharacterized protein LOC111491808 [Cucurbita maxima])

HSP 1 Score: 338.6 bits (867), Expect = 1.3e-89
Identity = 170/176 (96.59%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFS 60
           MVAISPS+VGFTSQFGQGWKTAREMTPVRSSNLRVSAK+TEKGEEKEDG ERKNKQSLFS
Sbjct: 1   MVAISPSNVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKEDGSERKNKQSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120
           SVTEALDFSQVRSSRDAELL+DARQATK+GGRMS+EQYGALRRKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSQVRSSRDAELLEDARQATKSGGRMSQEQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 177
           GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 176

[Close]

BLAST of Carg24481 vs. NCBI nr
Match: XP_004146444.1 (PREDICTED: uncharacterized protein LOC101211273 [Cucumis sativus] >KGN50725.1 hypothetical protein Csa_5G220390 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 3.2e-72
Identity = 148/176 (84.09%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFS 60
           MVAI PSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E GG  +NK+SLFS
Sbjct: 1   MVAICPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVRA---EKGEERESGG-GENKKSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120
           SVTEALDFS VRS+RDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSTRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 177
           GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSS  NFF+KFF K
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSPGNFFSKFFSK 172

[Close]

BLAST of Carg24481 vs. NCBI nr
Match: XP_008456929.1 (PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >XP_016902036.1 PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 5.4e-72
Identity = 150/177 (84.75%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKED-GGERKNKQSLF 60
           MVAISPSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  GGE  NK+SLF
Sbjct: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLF 60

Query: 61  SSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEV 120
           SSVTEALDFS VRSSRDAELLDDARQATKAGGRM+REQYGALRRKIGGTYKDFFKSYIEV
Sbjct: 61  SSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEV 120

Query: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 177
           DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Sbjct: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of Carg24481 vs. TAIR10
Match: AT3G56290.1 (unknown protein)

HSP 1 Score: 193.0 bits (489), Expect = 1.6e-49
Identity = 92/118 (77.97%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 57  SLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSY 116
           SLF+ +T+ALDFSQVRS +DAELL +AR+ATK+G +M++EQYGALRRKIGGTYKDFFKSY
Sbjct: 56  SLFTQLTDALDFSQVRSEKDAELLYEAREATKSGRKMTQEQYGALRRKIGGTYKDFFKSY 115

Query: 117 IEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFF 175
           +EVDGQYVEEGWVDKTCK+CKKDT+GEARQVDKLGRYAHV+CL+  N  S NFFT+ F
Sbjct: 116 VEVDGQYVEEGWVDKTCKICKKDTKGEARQVDKLGRYAHVSCLQ--NPPSGNFFTRLF 171

[Close]

BLAST of Carg24481 vs. TrEMBL
Match: tr|A0A0A0KM41|A0A0A0KM41_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G220390 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.1e-72
Identity = 148/176 (84.09%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFS 60
           MVAI PSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E GG  +NK+SLFS
Sbjct: 1   MVAICPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVRA---EKGEERESGG-GENKKSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120
           SVTEALDFS VRS+RDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSTRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 177
           GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSS  NFF+KFF K
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSPGNFFSKFFSK 172

[Close]

BLAST of Carg24481 vs. TrEMBL
Match: tr|A0A1S3C3X8|A0A1S3C3X8_CUCME (uncharacterized protein LOC103496731 OS=Cucumis melo OX=3656 GN=LOC103496731 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.6e-72
Identity = 150/177 (84.75%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKED-GGERKNKQSLF 60
           MVAISPSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  GGE  NK+SLF
Sbjct: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLF 60

Query: 61  SSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEV 120
           SSVTEALDFS VRSSRDAELLDDARQATKAGGRM+REQYGALRRKIGGTYKDFFKSYIEV
Sbjct: 61  SSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEV 120

Query: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 177
           DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Sbjct: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of Carg24481 vs. TrEMBL
Match: tr|A0A1U8LWN5|A0A1U8LWN5_GOSHI (uncharacterized protein LOC107931583 OS=Gossypium hirsutum OX=3635 GN=LOC107931583 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 9.5e-57
Identity = 123/171 (71.93%), Postives = 138/171 (80.70%), Query Frame = 0


Query: 4   ISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVT 63
           +SPS      Q      T R  +   ++  RVSAK  E  +EKE+ GE+K+KQSLFSSVT
Sbjct: 8   LSPSQYSIPKQH---LYTQRLKSKSYATLFRVSAKQQETNDEKEE-GEKKSKQSLFSSVT 67

Query: 64  EALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVDGQY 123
           EALDFSQVRS +DAELLD+AR+ATK+GGRMSREQYGALRRKIGGTYKDFFKSY+EV+G+Y
Sbjct: 68  EALDFSQVRSVKDAELLDEAREATKSGGRMSREQYGALRRKIGGTYKDFFKSYVEVNGEY 127

Query: 124 VEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFF 175
           VEEGWVDKTCKVCKKDTRGEARQVD  GRY HVACLEKSNS   NFFTK F
Sbjct: 128 VEEGWVDKTCKVCKKDTRGEARQVDNFGRYVHVACLEKSNSG--NFFTKLF 172

[Close]

BLAST of Carg24481 vs. TrEMBL
Match: tr|A0A2P5REJ9|A0A2P5REJ9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD17832 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-56
Identity = 117/141 (82.98%), Postives = 128/141 (90.78%), Query Frame = 0


Query: 34  RVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRM 93
           RVSAK  E  +EKE+ GE+K+KQSLFSSVTEALDFSQVRS +DAELLD+AR+ATK+GGRM
Sbjct: 35  RVSAKQQETNDEKEE-GEKKSKQSLFSSVTEALDFSQVRSVKDAELLDEAREATKSGGRM 94

Query: 94  SREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY 153
           SREQYGALRRKIGGTYKDFFKSY+EV+G+YVEEGWVDKTCKVCKKDTRGEARQVD  GRY
Sbjct: 95  SREQYGALRRKIGGTYKDFFKSYVEVNGEYVEEGWVDKTCKVCKKDTRGEARQVDNFGRY 154

Query: 154 AHVACLEKSNSSSPNFFTKFF 175
            HVACLEKSNS   NFFTK F
Sbjct: 155 VHVACLEKSNSG--NFFTKLF 172

[Close]

BLAST of Carg24481 vs. TrEMBL
Match: tr|A0A0B0PRW3|A0A0B0PRW3_GOSAR (Potassium transporter OS=Gossypium arboreum OX=29729 GN=F383_11745 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 6.2e-56
Identity = 116/141 (82.27%), Postives = 128/141 (90.78%), Query Frame = 0


Query: 34  RVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRM 93
           RVSAK  E  +EKE+ G++K+KQSLFSSVTEALDFSQVRS +DAELLD+AR+ATK+GGRM
Sbjct: 827 RVSAKQQETNDEKEE-GKKKSKQSLFSSVTEALDFSQVRSVQDAELLDEAREATKSGGRM 886

Query: 94  SREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY 153
           SREQYGALRRKIGGTYKDFFKSY+EV+G+YVEEGWVDKTCKVCKKDTRGEARQVD  GRY
Sbjct: 887 SREQYGALRRKIGGTYKDFFKSYVEVNGEYVEEGWVDKTCKVCKKDTRGEARQVDNFGRY 946

Query: 154 AHVACLEKSNSSSPNFFTKFF 175
            HVACLEKSNS   NFFTK F
Sbjct: 947 VHVACLEKSNSG--NFFTKLF 964

The following BLAST results are available for this feature:

BLAST of Carg24481 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941869.1	9.6e-93	100.00	uncharacterized protein LOC111447101 [Cucurbita moschata]	[more]
XP_023532465.1	1.1e-91	98.86	uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo]	[more]
XP_022996627.1	1.3e-89	96.59	uncharacterized protein LOC111491808 [Cucurbita maxima]	[more]
XP_004146444.1	3.2e-72	84.09	PREDICTED: uncharacterized protein LOC101211273 [Cucumis sativus] >KGN50725.1 hy...	[more]
XP_008456929.1	5.4e-72	84.75	PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >XP_016902036.1 P...	[more]

BLAST of Carg24481 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56290.1	1.6e-49	77.97	unknown protein	[more]

BLAST of Carg24481 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg24481 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KM41\|A0A0A0KM41_CUCSA	2.1e-72	84.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G220390 PE=4 SV=1	[more]
tr\|A0A1S3C3X8\|A0A1S3C3X8_CUCME	3.6e-72	84.75	uncharacterized protein LOC103496731 OS=Cucumis melo OX=3656 GN=LOC103496731 PE=...	[more]
tr\|A0A1U8LWN5\|A0A1U8LWN5_GOSHI	9.5e-57	71.93	uncharacterized protein LOC107931583 OS=Gossypium hirsutum OX=3635 GN=LOC1079315...	[more]
tr\|A0A2P5REJ9\|A0A2P5REJ9_GOSBA	1.6e-56	82.98	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD17832 PE=4 SV...	[more]
tr\|A0A0B0PRW3\|A0A0B0PRW3_GOSAR	6.2e-56	82.27	Potassium transporter OS=Gossypium arboreum OX=29729 GN=F383_11745 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0045893	positive regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR008013	GATA_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24481-RA	Carg24481-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008013	GATA-type transcription activator, N-terminal	PFAM	PF05349	GATA-N	coord: 59..119 e-value: 2.0E-4 score: 21.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..58
None	No IPR available	PANTHER	PTHR36771	FAMILY NOT NAMED	coord: 2..174

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24481	Cla007279	Watermelon (97103) v1	carwmB0910
Carg24481	Csa5G220390	Cucumber (Chinese Long) v2	carcuB0926
Carg24481	MELO3C020131	Melon (DHL92) v3.5.1	carmeB0895
Carg24481	ClCG07G004950	Watermelon (Charleston Gray)	carwcgB0887
Carg24481	CSPI05G11430	Wild cucumber (PI 183967)	carcpiB0947
Carg24481	Cucsa.144050	Cucumber (Gy14) v1	carcgyB1028
Carg24481	CmaCh04G001110	Cucurbita maxima (Rimu)	carcmaB1249
Carg24481	CmoCh04G001080	Cucurbita moschata (Rifu)	carcmoB1219
Carg24481	CsGy5G008690	Cucumber (Gy14) v2	carcgybB0898
Carg24481	MELO3C020131.2	Melon (DHL92) v3.6.1	carmedB0903
Carg24481	CsaV3_5G010830	Cucumber (Chinese Long) v3	carcucB0948
Carg24481	Cla97C07G133330	Watermelon (97103) v2	carwmbB0953
Carg24481	Bhi07G000428	Wax gourd	carwgoB1053

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24481	Silver-seed gourd	carcarB570
Carg24481	Cucurbita maxima (Rimu)	carcmaB1250
Carg24481	Cucurbita moschata (Rifu)	carcmoB1220
Carg24481	Cucurbita pepo (Zucchini)	carcpeB1258
Carg24481	Cucurbita pepo (Zucchini)	carcpeB1259
Carg24481	Bottle gourd (USVL1VR-Ls)	carlsiB828
Carg24481	Watermelon (97103) v2	carwmbB0952