CmaCh04G000780 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G000780
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing protein
LocationCma_Chr04 : 385256 .. 387537 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAAAGAAGCCCTCCAATTCTTGGCTCACCTGCGACGAATCTCCCGCTTTCCCTCCCCTTTCACCTGCAACAAGCTTGTCCACTCTCTCATCAACTCCGGCTGCGGCGAGCTCTCCGCCAAAGTGCTTTTCCACTTTCTCTCCAAAGGGTACACTCCTCATTCATCGTCTTTCAATTCCATCATCTCCTTTTTCTGTAAATTAGGGAACATAAAATATGCCGAACGGATTTTGAATTCAATGCCTAGATTTGGGTGCTCGCCTGATATTGTGTCCTACAATTCTTTGTTACATGGGTATTGTGCGAGTTATAAGATTAGAGAGGCTTGTTTTCTTGTTAATAGAGTTCGTGGGGGTTTGTTGAATCCTGATTTGGTTATGTTTAATATACTGTTTAATGGGTTTGCTAAGGTTTATATGAAGAATGAGGCGTTTATGTATCTGGGTTTGATGTGGAAATCCTGTTTGCCTAATGTTGTTACTTATGGTACACTCGTTGATATGTTCTGTAAGATGGGGGATATGGAAGTGGGTAACAAAATGTTTTTTGATATGATGAAGGTGGGGGTTGTGCCTAATTTGGTTGCTTTTAGCTCCTTGATTGATGGGTATTGCAAGGCTGGGAGTTTGAATGTTGCATTTGGATACTTAGAGAGAATGCAACAATGCTCGGTTCAGCCGAACGAGTTCACATATTCAACGTTGATTGATGGTTGTTGCAAGCAGGGGATGTTGGAAAGAGCTGACTTTTTGTTTGAAGAGATGTTGAGTGTTGGTATTCTGCCTAATTGTACGGTTCATACTTCGATAATAGACGGACATTTTAAGAAGGGAAATGTAGACAATGCGTTGAAGTATATAAACAGGATGTTCGATCGAGAAATAGAACTCGATCTAACAGCATATACGGTAGTTATCGCGGGCTTCCGTAGAGTTGGTAGGTTGCATAAGGCAATGGAAGCTGCAGAAAATGTGGTGAAGAATGGATTACTTCCTGATAGGATAATACTAACAGCTATTATGGATGTGCATTTCAAAGCTGGAAACTTAAAAGAAGCTTTGAATGCGTACAGAATATTACTCGCTAGGGGTTTTGAGCCTGATACCGTGACTCTATCCGCTCTAATAGATGGTCTATGCAAGAACGGATACTTGCAGGAGGCTAGACGGTACGTGGTCAAAGAAAAGGCCAATGAAATTCTATATACAGTGCTTATAGATGCACTATGTAAGGAGGGTAATTTAGATGAAGCTGAGAGAACCATTAAGGAAATGTGCGAGGCAGGGTTTGTTCCTGATAAATATGTGTATACTTCTTGGATTGCAGAGCTTTGCAAGCAAGGAAATTTGCTCAAGGCTTTCACGGTCAAGAAAAGGATGGTTCAAGAAAACATTGAACCTGATTTATTAACCTACAGTTCCCTGATTGGTGGTTTGGCGGAGAAGGGACTAATGATAGAAGCCAAACAGGTTTTTGATGACATGTTAAATGCAGGAATCACTCCAGATTCTGTTGCTTATGACATCCTTATAAGAGGGTATCATAATCAGGGTAATGTAGTTGCGATTTCAGGTCTACACGATGAAATGAGAACGAGAGGAATTGTTATTGAACATTAATACACGAGATATCGACGCCGGGTCTAATCCTTCAATTTATACCGGAACCTTCCATACGAGAAGCCAAGAGGCATGTGATTGGCATCAGATGATATCGAAAATAGAGAGATTCCAAGTCATATATTCCTATTCCTCCATATATTGCTTTGCTTATTGCAGGTTTCAAATGCCCCCAAAGGTTTTAAATCATGCTGTTCACATGTGGGTTATCGTCATAAGGTGCTGTTTCGATATCTACTATTGACCACATGTAAACAAAATCGAACTCTAGACTTCTACGCAACCAATTTGCAACTCTATGATCTCGTGCTCTCTGTTTGGCAGATTTTGTGCTTCTTCTCCTCTTGCTGAGTAGCTGCAACATGGGATCTGGGAATAGACGTGACATTGCTTGAGATGGCACCTGATGGTTGCTGTAGTGTTGGAGAATTTCAAGTCGTCAGGCTGCTACTGAAGAAAAATACCTATTCTTGCAAGCCTGAGCTTTCTATATCTTTATTGAATCCATTGAAGATTTGTAGTAAACCCAAATAAACACCACACACACATAGGAATTGTTGCTTATGAAGAATCTCTCAATCGAAATAGAATTATCCATTCAAGGTTGATCTTTGTTTTTCAGCATATATACATTTATAATACACACAATTGATTGTTCC

mRNA sequence

ATGGTCAAAGAAGCCCTCCAATTCTTGGCTCACCTGCGACGAATCTCCCGCTTTCCCTCCCCTTTCACCTGCAACAAGCTTGTCCACTCTCTCATCAACTCCGGCTGCGGCGAGCTCTCCGCCAAAGTGCTTTTCCACTTTCTCTCCAAAGGGTACACTCCTCATTCATCGTCTTTCAATTCCATCATCTCCTTTTTCTGTAAATTAGGGAACATAAAATATGCCGAACGGATTTTGAATTCAATGCCTAGATTTGGGTGCTCGCCTGATATTGTGTCCTACAATTCTTTGTTACATGGGTATTGTGCGAGTTATAAGATTAGAGAGGCTTGTTTTCTTGTTAATAGAGTTCGTGGGGGTTTGTTGAATCCTGATTTGGTTATGTTTAATATACTGTTTAATGGGTTTGCTAAGGTTTATATGAAGAATGAGGCGTTTATGTATCTGGGTTTGATGTGGAAATCCTGTTTGCCTAATGTTGTTACTTATGGTACACTCGTTGATATGTTCTGTAAGATGGGGGATATGGAAGTGGGTAACAAAATGTTTTTTGATATGATGAAGGTGGGGGTTGTGCCTAATTTGGTTGCTTTTAGCTCCTTGATTGATGGGTATTGCAAGGCTGGGAGTTTGAATGTTGCATTTGGATACTTAGAGAGAATGCAACAATGCTCGGTTCAGCCGAACGAGTTCACATATTCAACGTTGATTGATGGTTGTTGCAAGCAGGGGATGTTGGAAAGAGCTGACTTTTTGTTTGAAGAGATGTTGAGTGTTGGTATTCTGCCTAATTGTACGGTTCATACTTCGATAATAGACGGACATTTTAAGAAGGGAAATGTAGACAATGCGTTGAAGTATATAAACAGGATGTTCGATCGAGAAATAGAACTCGATCTAACAGCATATACGGTAGTTATCGCGGGCTTCCGTAGAGTTGGTAGGTTGCATAAGGCAATGGAAGCTGCAGAAAATGTGGTGAAGAATGGATTACTTCCTGATAGGATAATACTAACAGCTATTATGGATGTGCATTTCAAAGCTGGAAACTTAAAAGAAGCTTTGAATGCGTACAGAATATTACTCGCTAGGGGTTTTGAGCCTGATACCGTGACTCTATCCGCTCTAATAGATGGTCTATGCAAGAACGGATACTTGCAGGAGGCTAGACGGTACGTGGTCAAAGAAAAGGCCAATGAAATTCTATATACAGTGCTTATAGATGCACTATGTAAGGAGGGTAATTTAGATGAAGCTGAGAGAACCATTAAGGAAATGTGCGAGGCAGGGTTTGTTCCTGATAAATATGTGTATACTTCTTGGATTGCAGAGCTTTGCAAGCAAGGAAATTTGCTCAAGGCTTTCACGGTCAAGAAAAGGATGGTTCAAGAAAACATTGAACCTGATTTATTAACCTACAGTTCCCTGATTGGTGGTTTGGCGGAGAAGGGACTAATGATAGAAGCCAAACAGGTTTTTGATGACATGTTAAATGCAGGAATCACTCCAGATTCTGTTGCTTATGACATCCTTATAAGAGGGTATCATAATCAGGGTAATGTAGTTGCGATTTCAGATTTTGTGCTTCTTCTCCTCTTGCTGAGTAGCTGCAACATGGGATCTGGGAATAGACGTGACATTGCTTGAGATGGCACCTGATGGTTGCTGTAGTGTTGGAGAATTTCAAGTCGTCAGGCTGCTACTGAAGAAAAATACCTATTCTTGCAAGCCTGAGCTTTCTATATCTTTATTGAATCCATTGAAGATTTGTAGTAAACCCAAATAAACACCACACACACATAGGAATTGTTGCTTATGAAGAATCTCTCAATCGAAATAGAATTATCCATTCAAGGTTGATCTTTGTTTTTCAGCATATATACATTTATAATACACACAATTGATTGTTCC

Coding sequence (CDS)

ATGGTCAAAGAAGCCCTCCAATTCTTGGCTCACCTGCGACGAATCTCCCGCTTTCCCTCCCCTTTCACCTGCAACAAGCTTGTCCACTCTCTCATCAACTCCGGCTGCGGCGAGCTCTCCGCCAAAGTGCTTTTCCACTTTCTCTCCAAAGGGTACACTCCTCATTCATCGTCTTTCAATTCCATCATCTCCTTTTTCTGTAAATTAGGGAACATAAAATATGCCGAACGGATTTTGAATTCAATGCCTAGATTTGGGTGCTCGCCTGATATTGTGTCCTACAATTCTTTGTTACATGGGTATTGTGCGAGTTATAAGATTAGAGAGGCTTGTTTTCTTGTTAATAGAGTTCGTGGGGGTTTGTTGAATCCTGATTTGGTTATGTTTAATATACTGTTTAATGGGTTTGCTAAGGTTTATATGAAGAATGAGGCGTTTATGTATCTGGGTTTGATGTGGAAATCCTGTTTGCCTAATGTTGTTACTTATGGTACACTCGTTGATATGTTCTGTAAGATGGGGGATATGGAAGTGGGTAACAAAATGTTTTTTGATATGATGAAGGTGGGGGTTGTGCCTAATTTGGTTGCTTTTAGCTCCTTGATTGATGGGTATTGCAAGGCTGGGAGTTTGAATGTTGCATTTGGATACTTAGAGAGAATGCAACAATGCTCGGTTCAGCCGAACGAGTTCACATATTCAACGTTGATTGATGGTTGTTGCAAGCAGGGGATGTTGGAAAGAGCTGACTTTTTGTTTGAAGAGATGTTGAGTGTTGGTATTCTGCCTAATTGTACGGTTCATACTTCGATAATAGACGGACATTTTAAGAAGGGAAATGTAGACAATGCGTTGAAGTATATAAACAGGATGTTCGATCGAGAAATAGAACTCGATCTAACAGCATATACGGTAGTTATCGCGGGCTTCCGTAGAGTTGGTAGGTTGCATAAGGCAATGGAAGCTGCAGAAAATGTGGTGAAGAATGGATTACTTCCTGATAGGATAATACTAACAGCTATTATGGATGTGCATTTCAAAGCTGGAAACTTAAAAGAAGCTTTGAATGCGTACAGAATATTACTCGCTAGGGGTTTTGAGCCTGATACCGTGACTCTATCCGCTCTAATAGATGGTCTATGCAAGAACGGATACTTGCAGGAGGCTAGACGGTACGTGGTCAAAGAAAAGGCCAATGAAATTCTATATACAGTGCTTATAGATGCACTATGTAAGGAGGGTAATTTAGATGAAGCTGAGAGAACCATTAAGGAAATGTGCGAGGCAGGGTTTGTTCCTGATAAATATGTGTATACTTCTTGGATTGCAGAGCTTTGCAAGCAAGGAAATTTGCTCAAGGCTTTCACGGTCAAGAAAAGGATGGTTCAAGAAAACATTGAACCTGATTTATTAACCTACAGTTCCCTGATTGGTGGTTTGGCGGAGAAGGGACTAATGATAGAAGCCAAACAGGTTTTTGATGACATGTTAAATGCAGGAATCACTCCAGATTCTGTTGCTTATGACATCCTTATAAGAGGGTATCATAATCAGGGTAATGTAGTTGCGATTTCAGATTTTGTGCTTCTTCTCCTCTTGCTGAGTAGCTGCAACATGGGATCTGGGAATAGACGTGACATTGCTTGA

Protein sequence

MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFNSIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGGLLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDGCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELDLTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDFVLLLLLLSSCNMGSGNRRDIA
Homology
[Close]
BLAST of CmaCh04G000780 vs. Swiss-Prot
Match: PP141_ARATH (Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 3.1e-170
Identity = 282/532 (53.01%), Postives = 387/532 (72.74%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           MV+EALQFL+ LR+ S  P PFTCNK +H LINS CG LS K L + +S+GYTPH SSFN
Sbjct: 1   MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVR-- 120
           S++SF CKLG +K+AE I++SMPRFGC PD++SYNSL+ G+C +  IR A  ++  +R  
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120

Query: 121 -GGLLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDME 180
            G +  PD+V FN LFNGF+K+ M +E F+Y+G+M K C PNVVTY T +D FCK G+++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180

Query: 181 VGNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLI 240
           +  K F  M +  + PN+V F+ LIDGYCKAG L VA    + M++  +  N  TY+ LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240

Query: 241 DGCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIE 300
           DG CK+G ++RA+ ++  M+   + PN  V+T+IIDG F++G+ DNA+K++ +M ++ + 
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 301 LDLTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNA 360
           LD+TAY V+I+G    G+L +A E  E++ K+ L+PD +I T +M+ +FK+G +K A+N 
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360

Query: 361 YRILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLD 420
           Y  L+ RGFEPD V LS +IDG+ KNG L EA  Y   EKAN+++YTVLIDALCKEG+  
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420

Query: 421 EAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLI 480
           E ER   ++ EAG VPDK++YTSWIA LCKQGNL+ AF +K RMVQE +  DLL Y++LI
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480

Query: 481 GGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDFVL 530
            GLA KGLM+EA+QVFD+MLN+GI+PDS  +D+LIR Y  +GN+ A SD +L
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532

[Close]
BLAST of CmaCh04G000780 vs. Swiss-Prot
Match: PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.3e-80
Identity = 172/548 (31.39%), Postives = 285/548 (52.01%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           M++EA+Q  + ++R   FP   +CN L+H     G  +   +     +  G  P   ++N
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
            +I   CK G+++ A  +   M   G  PD V+YNS++ G+    ++ +       ++  
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326

Query: 121 LLNPDLVMFNILFNGFAKV-YMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVG 180
              PD++ +N L N F K   +      Y  +      PNVV+Y TLVD FCK G M+  
Sbjct: 327 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386

Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDG 240
            K + DM +VG+VPN   ++SLID  CK G+L+ AF     M Q  V+ N  TY+ LIDG
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446

Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELD 300
            C    ++ A+ LF +M + G++PN   + ++I G  K  N+D AL+ +N +  R I+ D
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506

Query: 301 LTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
           L  Y   I G   + ++  A      + + G+  + +I T +MD +FK+GN  E L+   
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566

Query: 361 ILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVK------EKANEILYTVLIDALCKE 420
            +     E   VT   LIDGLCKN  + +A  Y  +       +AN  ++T +ID LCK+
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626

Query: 421 GNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTY 480
             ++ A    ++M + G VPD+  YTS +    KQGN+L+A  ++ +M +  ++ DLL Y
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686

Query: 481 SSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQG---NVVAISDFVLL 539
           +SL+ GL+    + +A+   ++M+  GI PD V    +++ ++  G     V +  +++ 
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746

[Close]
BLAST of CmaCh04G000780 vs. Swiss-Prot
Match: PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.9e-69
Identity = 155/521 (29.75%), Postives = 272/521 (52.21%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           +V E  Q    +      P+ +T NK+V+     G  E + + +   +  G  P   ++ 
Sbjct: 198 LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYT 257

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
           S+I  +C+  ++  A ++ N MP  GC  + V+Y  L+HG C + +I EA  L  +++  
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 317

Query: 121 LLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCL-PNVVTYGTLVDMFCKMGDMEVG 180
              P +  + +L         K+EA   +  M ++ + PN+ TY  L+D  C     E  
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377

Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDG 240
            ++   M++ G++PN++ +++LI+GYCK G +  A   +E M+   + PN  TY+ LI G
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437

Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELD 300
            CK  +  +A  +  +ML   +LP+   + S+IDG  + GN D+A + ++ M DR +  D
Sbjct: 438 YCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 497

Query: 301 LTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
              YT +I    +  R+ +A +  +++ + G+ P+ ++ TA++D + KAG + EA     
Sbjct: 498 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 557

Query: 361 ILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEI-------LYTVLIDALCK 420
            +L++   P+++T +ALI GLC +G L+EA   +++EK  +I         T+LI  L K
Sbjct: 558 KMLSKNCLPNSLTFNALIHGLCADGKLKEAT--LLEEKMVKIGLQPTVSTDTILIHRLLK 617

Query: 421 EGNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLT 480
           +G+ D A    ++M  +G  PD + YT++I   C++G LL A  +  +M +  + PDL T
Sbjct: 618 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 677

Query: 481 YSSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIR 514
           YSSLI G  + G    A  V   M + G  P    +  LI+
Sbjct: 678 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715

[Close]
BLAST of CmaCh04G000780 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.1e-65
Identity = 158/529 (29.87%), Postives = 275/529 (51.98%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRF-PSPFTCNKLVHSLINSGCGELSAKVLF-HFLSKGYTPHSSS 60
           ++ +AL  + HL +   F P   + N ++ + I S      A+ +F   L    +P+  +
Sbjct: 149 LIDKALS-IVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT 208

Query: 61  FNSIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVR 120
           +N +I  FC  GNI  A  + + M   GC P++V+YN+L+ GYC   KI +   L+  + 
Sbjct: 209 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 268

Query: 121 GGLLNPDLVMFNILFNGFAKV-YMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDME 180
              L P+L+ +N++ NG  +   MK  +F+   +  +    + VTY TL+  +CK G+  
Sbjct: 269 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 328

Query: 181 VGNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLI 240
               M  +M++ G+ P+++ ++SLI   CKAG++N A  +L++M+   + PNE TY+TL+
Sbjct: 329 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 388

Query: 241 DGCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIE 300
           DG  ++G +  A  +  EM   G  P+   + ++I+GH   G +++A+  +  M ++ + 
Sbjct: 389 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 448

Query: 301 LDLTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNA 360
            D+ +Y+ V++GF R   + +A+     +V+ G+ PD I  ++++    +    KEA + 
Sbjct: 449 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 508

Query: 361 YRILLARGFEPDTVTLSALIDGLCKNGYLQEARRY--VVKEKA---NEILYTVLIDALCK 420
           Y  +L  G  PD  T +ALI+  C  G L++A +    + EK    + + Y+VLI+ L K
Sbjct: 509 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 568

Query: 421 EGNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLT 480
           +    EA+R + ++     VP    Y + I E C                  NIE    +
Sbjct: 569 QSRTREAKRLLLKLFYEESVPSDVTYHTLI-ENCS-----------------NIE--FKS 628

Query: 481 YSSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNV 522
             SLI G   KG+M EA QVF+ ML     PD  AY+I+I G+   G++
Sbjct: 629 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 656

[Close]
BLAST of CmaCh04G000780 vs. Swiss-Prot
Match: PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 4.6e-65
Identity = 148/528 (28.03%), Postives = 261/528 (49.43%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           M++++L+    +      PS +TCN ++ S++ SG        L   L +   P  ++FN
Sbjct: 138 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN 197

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
            +I+  C  G+ + +  ++  M + G +P IV+YN++LH YC   + + A  L++ ++  
Sbjct: 198 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 257

Query: 121 LLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCL-PNVVTYGTLVDMFCKMGDMEVG 180
            ++ D+  +N+L +   +     + ++ L  M K  + PN VTY TL++ F   G + + 
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 317

Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDG 240
           +++  +M+  G+ PN V F++LIDG+   G+   A      M+   + P+E +Y  L+DG
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377

Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELD 300
            CK    + A   +  M   G+      +T +IDG  K G +D A+  +N M    I+ D
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 301 LTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
           +  Y+ +I GF +VGR   A E    + + GL P+ II + ++    + G LKEA+  Y 
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

Query: 361 ILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEIL-----YTVLIDALCKEG 420
            ++  G   D  T + L+  LCK G + EA  ++    ++ IL     +  LI+     G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557

Query: 421 NLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYS 480
              +A     EM + G  P  + Y S +  LCK G+L +A    K +       D + Y+
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617

Query: 481 SLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVV 523
           +L+  + + G + +A  +F +M+   I PDS  Y  LI G   +G  V
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665

[Close]
BLAST of CmaCh04G000780 vs. TrEMBL
Match: A0A0A0KPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G021290 PE=4 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 1.6e-197
Identity = 336/398 (84.42%), Postives = 368/398 (92.46%), Query Frame = 1 

Query: 128 MFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGNKMFFDMM 187
           MFNILFNGFAKVYMKNEAFMY GLMWK CLP++VTYGT VDMFCKMGDM++GN+MF DMM
Sbjct: 1   MFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMGNRMFLDMM 60

Query: 188 KVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDGCCKQGMLE 247
           KVG+VPNLV FSSLIDGYCKAGSL+VAF Y ERM++CSV+PNEFTYSTLIDGC K GML 
Sbjct: 61  KVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKHGMLA 120

Query: 248 RADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELDLTAYTVVI 307
           RAD LFE+MLS  ILPNCTV+TSIIDGHFKKGNVD+A+KYIN+MFDR+I+LDLTAYTV+I
Sbjct: 121 RADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTAYTVII 180

Query: 308 AGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRILLARGFE 367
           +GF RVGR  K+MEAAE V KNGLLPDRIILTAIMDVHFKAGN+KEALNAY+ILLA+GFE
Sbjct: 181 SGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYKILLAKGFE 240

Query: 368 PDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAERTIKEMC 427
            D VTLSAL+DGL K+GYLQEARRY+VKE ANEILYTV IDALCKEGNLD+AE+ IKEM 
Sbjct: 241 ADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDAEKMIKEMS 300

Query: 428 EAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGLAEKGLMI 487
           EAGFVPDK+VYTSWIAELCKQGNLLKAF VKKRMVQE++EPDLLTYSSLIGGLAEKGLMI
Sbjct: 301 EAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGGLAEKGLMI 360

Query: 488 EAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAIS 526
           EAKQVFDDMLN GITPD V+YDILIRGYHNQGN  AIS
Sbjct: 361 EAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAIS 398

[Close]
BLAST of CmaCh04G000780 vs. TrEMBL
Match: W9R0T6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005539 PE=4 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 2.1e-197
Identity = 324/525 (61.71%), Postives = 411/525 (78.29%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           MV+E LQF AHLRR SRFP+PFT NKL+H L ++ CG+LS K+L HFL+K Y PH SSFN
Sbjct: 1   MVRETLQFFAHLRRTSRFPTPFTFNKLLHHLTSANCGDLSLKILSHFLTKRYVPHPSSFN 60

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
           S++SF CK G +++A  +++SMP+FG SPD+V+YN L+ G+C +  + EACF+V+++R G
Sbjct: 61  SVLSFLCKSGQLRFARNVVDSMPKFGFSPDVVTYNCLVDGFCKNLDVEEACFVVSKMRMG 120

Query: 121 LLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGN 180
              PDLV FN LFNGF+K  M+ EAF+Y+GLMWK CLPNVVTY T VDMFCK+G+ ++G 
Sbjct: 121 KCGPDLVTFNTLFNGFSKTRMEREAFVYMGLMWKCCLPNVVTYSTFVDMFCKVGNFDLGY 180

Query: 181 KMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDGC 240
           K+F DM+  GV+PN V F++L+DGYCKAG+L++AF     M++ SV PN  TY+ L+DG 
Sbjct: 181 KVFRDMVNAGVLPNSVVFTALLDGYCKAGNLDIAFELFVEMKRSSVSPNVVTYAALVDGF 240

Query: 241 CKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELDL 300
           CK+G LERA+ LF +ML  G+ PN  V+TSIIDGHF KGNVD+A+KY+ +M D+ + LD+
Sbjct: 241 CKRGALERAESLFSKMLEDGVEPNSVVYTSIIDGHFVKGNVDDAVKYMTKMCDQGLRLDM 300

Query: 301 TAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRI 360
           TAY VVI GF + GRL KAME   ++ ++GL PD+I+LT +MD HFK+G+LK AL  YR 
Sbjct: 301 TAYEVVIRGFCKNGRLDKAMEVMRSMTESGLFPDKIMLTTVMDAHFKSGDLKRALEVYRE 360

Query: 361 LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAE 420
           +L RGFEPD VTLS+++DGL K G+LQEAR Y+ +EKANEI YTVLID +CKEG+  E E
Sbjct: 361 ILFRGFEPDIVTLSSIMDGLSKKGHLQEARGYLCREKANEISYTVLIDGMCKEGHFGEVE 420

Query: 421 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 480
              +EM EAGFVPDKY YTSWIA LCKQG L++AF +K RM QE IEPDLLTYSSLI GL
Sbjct: 421 MVFREMSEAGFVPDKYAYTSWIAGLCKQGKLVEAFVLKNRMAQEGIEPDLLTYSSLIFGL 480

Query: 481 AEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAIS 526
           A KGLM+EAKQVFDDML  GI+PDS  YDILIRGY  +GN VA+S
Sbjct: 481 ANKGLMVEAKQVFDDMLKRGISPDSAVYDILIRGYLKEGNEVAVS 525

[Close]
BLAST of CmaCh04G000780 vs. TrEMBL
Match: A0A061EFM6_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_011056 PE=4 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 5.0e-175
Identity = 300/523 (57.36%), Postives = 374/523 (71.51%), Query Frame = 1 

Query: 6   LQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFNSIISF 65
           LQF + L++ S++P PF  NKL+H L  S CG LS K+L  FLSKGYTPH SSFNS ISF
Sbjct: 43  LQFCSQLKKTSKYPDPFFFNKLLHRLTASNCGTLSLKLLSFFLSKGYTPHPSSFNSSISF 102

Query: 66  FCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGGLLNPD 125
            CKLG   YA++++NSMP +GC PDI +YNSL+ GY     + +AC + + +R G   PD
Sbjct: 103 LCKLGRSDYAQKLVNSMPFYGCEPDIATYNSLIDGYFKCGDVVKACLVFDDIRAGKCKPD 162

Query: 126 LVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGNKMFFD 185
           LV FN LFNGF K+    E F+Y+G MWK CLPNV+TY T +DMFCK+GD+++G K+F D
Sbjct: 163 LVTFNALFNGFCKMRRNKEVFVYMGYMWKCCLPNVITYSTWIDMFCKLGDLKMGFKVFRD 222

Query: 186 MMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDGCCKQGM 245
           M K GV  N + F+ LIDG CK G   +AF     M+Q  +  N  TY+ LIDG CK+GM
Sbjct: 223 MKKDGVSLNSIVFTCLIDGCCKVGDFELAFELYWEMKQTKLALNVVTYTALIDGLCKKGM 282

Query: 246 LERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELDLTAYTV 305
           LERA+ LF  ML   + PN  V+TSIIDGHFKK NV +ALKY+ +M  + I+ D+  Y V
Sbjct: 283 LERAECLFLRMLKDKVQPNSVVYTSIIDGHFKKRNVSDALKYLAKMCVQGIKFDMALYGV 342

Query: 306 VIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRILLARG 365
           +I+G    GR  KA +  EN+VK+GLLPD+++LT +MD HFKAGN+K AL+ Y  LLARG
Sbjct: 343 IISGLSNCGRFDKASKFMENMVKSGLLPDKLLLTTMMDAHFKAGNVKAALDVYGELLARG 402

Query: 366 FEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAERTIKE 425
           F+PD V LS+L+DGLCK G L EA  Y  +EKANEI YTVLID L K+G+  E  R  +E
Sbjct: 403 FDPDVVVLSSLMDGLCKRGCLHEAESYFCREKANEISYTVLIDGLAKKGDFTEVNRVFRE 462

Query: 426 MCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGLAEKGL 485
           M EAGF PDKYVYTSWIA LC+QGNL++AF +K RMVQE  +PDLLTYSSLI GLA KGL
Sbjct: 463 MLEAGFTPDKYVYTSWIAGLCEQGNLIEAFRLKNRMVQEGFQPDLLTYSSLIFGLANKGL 522

Query: 486 MIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDFV 529
           MIEAKQ+F DML   ITPD+  YDI+IRGY  Q N  A+S+ +
Sbjct: 523 MIEAKQIFQDMLKRKITPDAAVYDIMIRGYLQQNNEAAVSELL 565

[Close]
BLAST of CmaCh04G000780 vs. TrEMBL
Match: A0A0D2Q7W0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G171900 PE=4 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 4.2e-174
Identity = 296/520 (56.92%), Postives = 375/520 (72.12%), Query Frame = 1 

Query: 6   LQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFNSIISF 65
           LQF + L++ S++P P++ NKL+H L  S CG LS K+L  FLSKGYTPH SSFNS ISF
Sbjct: 40  LQFFSDLKKTSKYPDPYSFNKLLHKLTASDCGALSLKLLSFFLSKGYTPHPSSFNSTISF 99

Query: 66  FCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGGLLNPD 125
           FCKLG   YA++++N MP +GC PDI +YNSL+ GY    ++ +AC +VN +R     PD
Sbjct: 100 FCKLGQSSYAQKLVNLMPLYGCEPDIATYNSLIDGYFKCGEVVKACLIVNEIRVDKCKPD 159

Query: 126 LVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGNKMFFD 185
           LV FN+LFNGF K+  K EAF+Y+GLMWK CLPNVVTY T +DMFCK+GD+ +G K+F D
Sbjct: 160 LVTFNVLFNGFCKMRKKKEAFVYMGLMWKCCLPNVVTYSTWIDMFCKVGDLNMGVKVFRD 219

Query: 186 MMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDGCCKQGM 245
           M K  V+ N + F+ LIDGYCK G    AF   + M+   +  N  TY+ LIDG CK+GM
Sbjct: 220 MKKDKVLLNSIVFTCLIDGYCKVGDFEAAFELCKEMKLVKLAVNVVTYTALIDGLCKKGM 279

Query: 246 LERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELDLTAYTV 305
           LERA+ LF  ML   + PN  V+TSIID HFKK NV +ALKY+ +M+ + +E D+ AY V
Sbjct: 280 LERAECLFFRMLKDKVKPNSVVYTSIIDAHFKKSNVTDALKYLGKMYVQGLEFDMAAYGV 339

Query: 306 VIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRILLARG 365
           +IAG    G   KA    EN+VK+GL PD+++LT IMD HFKAGN+K ALN Y  +LARG
Sbjct: 340 IIAGLCNTGMFDKASIYMENMVKSGLRPDKLMLTTIMDAHFKAGNVKAALNVYGEILARG 399

Query: 366 FEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAERTIKE 425
           F+PD + L++L+DGLCK+G L EA  Y  + KAN+I YTVLI+ L K+G+  E  R  +E
Sbjct: 400 FDPDVIVLTSLMDGLCKHGCLNEAESYFCRGKANKISYTVLINGLAKKGDFTELNRVFRE 459

Query: 426 MCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGLAEKGL 485
           M EAGF  DKYVYTSWIA LC+QGNL++AF VK RMVQE  +PDLLTYSSLI GLA KGL
Sbjct: 460 MLEAGFTADKYVYTSWIAGLCEQGNLIEAFRVKNRMVQEGFQPDLLTYSSLIFGLANKGL 519

Query: 486 MIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAIS 526
           MIEAKQ+F+DML   ITPD+  Y+I+IRGY  Q N  A++
Sbjct: 520 MIEAKQIFEDMLKRQITPDAAVYEIMIRGYLRQDNEAAVT 559

[Close]
BLAST of CmaCh04G000780 vs. TrEMBL
Match: V4KT02_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10003932mg PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 3.3e-171
Identity = 290/532 (54.51%), Postives = 386/532 (72.56%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           MV+EALQF++ LR+ S  P P TCNK +H LINS CG LS K L + LS+GYTPH SSFN
Sbjct: 1   MVREALQFISRLRKSSNLPDPITCNKYIHQLINSNCGVLSLKFLAYLLSRGYTPHRSSFN 60

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVR-- 120
           S+ SF CKLG +K+AE I++SMPRFGC PD+VSYNSL+ G+C + +IR A  ++ R+R  
Sbjct: 61  SVASFVCKLGQVKFAEYIVHSMPRFGCLPDVVSYNSLIDGHCRNGEIRSASLVLKRLRAS 120

Query: 121 -GGLLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDME 180
            G +  PD+V FN LFNGF+K+ M  E F+Y+G+M K C PNVVTY T +D FCK G+++
Sbjct: 121 HGFMCRPDIVSFNSLFNGFSKMKMLKEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180

Query: 181 VGNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLI 240
           +  K F  M K  + PN+V F+ LIDGYCKAG L VA    E M++  +  N  TY+ L+
Sbjct: 181 LALKSFNCMKKDALSPNVVTFTCLIDGYCKAGDLEVAVSLYEDMRRVQMSLNVVTYTALL 240

Query: 241 DGCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIE 300
           DG CK+G +ERA+ L+  M    + PN  V+T+IIDG+F KG+ DNA+K++ +M ++ + 
Sbjct: 241 DGFCKRGEMERAEGLYSRMHEDKVEPNSLVYTTIIDGYFHKGDADNAMKFLAKMLNQGMR 300

Query: 301 LDLTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNA 360
           LD+ AY V+I+G    G+L +A E  E++ K GL+PD++ILT +MD +FK+G +K ALN 
Sbjct: 301 LDIAAYGVIISGLCGNGKLKEATEVVEDMEKGGLVPDKMILTTMMDAYFKSGLMKAALNV 360

Query: 361 YRILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLD 420
           YR  + RGFEPD V L+ LIDGL KNG L EA  Y  KEKAN+++YTVLIDALCKEG+  
Sbjct: 361 YREFIERGFEPDVVALTTLIDGLAKNGQLHEAIAYFCKEKANDVMYTVLIDALCKEGDFI 420

Query: 421 EAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLI 480
           E ER   ++ EAG VPDK++YTSWIA LCKQGNL+ AF +K +MVQE ++ DLLTY++LI
Sbjct: 421 EVERFFSKILEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLKLDLLTYTTLI 480

Query: 481 GGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDFVL 530
            GLA KGLM+EA+QVFD+ML +G +PDS  +D+LIR Y  +GN+ A SD  L
Sbjct: 481 NGLASKGLMVEARQVFDEMLRSGTSPDSAVFDLLIRAYEKEGNMTAASDLFL 532

[Close]
BLAST of CmaCh04G000780 vs. TAIR10
Match: AT2G01740.1 (AT2G01740.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 599.7 bits (1545), Expect = 1.8e-171
Identity = 282/532 (53.01%), Postives = 387/532 (72.74%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           MV+EALQFL+ LR+ S  P PFTCNK +H LINS CG LS K L + +S+GYTPH SSFN
Sbjct: 1   MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVR-- 120
           S++SF CKLG +K+AE I++SMPRFGC PD++SYNSL+ G+C +  IR A  ++  +R  
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120

Query: 121 -GGLLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDME 180
            G +  PD+V FN LFNGF+K+ M +E F+Y+G+M K C PNVVTY T +D FCK G+++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180

Query: 181 VGNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLI 240
           +  K F  M +  + PN+V F+ LIDGYCKAG L VA    + M++  +  N  TY+ LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240

Query: 241 DGCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIE 300
           DG CK+G ++RA+ ++  M+   + PN  V+T+IIDG F++G+ DNA+K++ +M ++ + 
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 301 LDLTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNA 360
           LD+TAY V+I+G    G+L +A E  E++ K+ L+PD +I T +M+ +FK+G +K A+N 
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360

Query: 361 YRILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLD 420
           Y  L+ RGFEPD V LS +IDG+ KNG L EA  Y   EKAN+++YTVLIDALCKEG+  
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420

Query: 421 EAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLI 480
           E ER   ++ EAG VPDK++YTSWIA LCKQGNL+ AF +K RMVQE +  DLL Y++LI
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480

Query: 481 GGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDFVL 530
            GLA KGLM+EA+QVFD+MLN+GI+PDS  +D+LIR Y  +GN+ A SD +L
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532

[Close]
BLAST of CmaCh04G000780 vs. TAIR10
Match: AT2G02150.1 (AT2G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 302.0 bits (772), Expect = 7.6e-82
Identity = 172/548 (31.39%), Postives = 285/548 (52.01%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           M++EA+Q  + ++R   FP   +CN L+H     G  +   +     +  G  P   ++N
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
            +I   CK G+++ A  +   M   G  PD V+YNS++ G+    ++ +       ++  
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326

Query: 121 LLNPDLVMFNILFNGFAKV-YMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVG 180
              PD++ +N L N F K   +      Y  +      PNVV+Y TLVD FCK G M+  
Sbjct: 327 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386

Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDG 240
            K + DM +VG+VPN   ++SLID  CK G+L+ AF     M Q  V+ N  TY+ LIDG
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446

Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELD 300
            C    ++ A+ LF +M + G++PN   + ++I G  K  N+D AL+ +N +  R I+ D
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506

Query: 301 LTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
           L  Y   I G   + ++  A      + + G+  + +I T +MD +FK+GN  E L+   
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566

Query: 361 ILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVK------EKANEILYTVLIDALCKE 420
            +     E   VT   LIDGLCKN  + +A  Y  +       +AN  ++T +ID LCK+
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626

Query: 421 GNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTY 480
             ++ A    ++M + G VPD+  YTS +    KQGN+L+A  ++ +M +  ++ DLL Y
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686

Query: 481 SSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQG---NVVAISDFVLL 539
           +SL+ GL+    + +A+   ++M+  GI PD V    +++ ++  G     V +  +++ 
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746

[Close]
BLAST of CmaCh04G000780 vs. TAIR10
Match: AT5G65560.1 (AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 263.1 bits (671), Expect = 3.9e-70
Identity = 155/521 (29.75%), Postives = 272/521 (52.21%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           +V E  Q    +      P+ +T NK+V+     G  E + + +   +  G  P   ++ 
Sbjct: 198 LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYT 257

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
           S+I  +C+  ++  A ++ N MP  GC  + V+Y  L+HG C + +I EA  L  +++  
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 317

Query: 121 LLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCL-PNVVTYGTLVDMFCKMGDMEVG 180
              P +  + +L         K+EA   +  M ++ + PN+ TY  L+D  C     E  
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377

Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDG 240
            ++   M++ G++PN++ +++LI+GYCK G +  A   +E M+   + PN  TY+ LI G
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437

Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELD 300
            CK  +  +A  +  +ML   +LP+   + S+IDG  + GN D+A + ++ M DR +  D
Sbjct: 438 YCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 497

Query: 301 LTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
              YT +I    +  R+ +A +  +++ + G+ P+ ++ TA++D + KAG + EA     
Sbjct: 498 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 557

Query: 361 ILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEI-------LYTVLIDALCK 420
            +L++   P+++T +ALI GLC +G L+EA   +++EK  +I         T+LI  L K
Sbjct: 558 KMLSKNCLPNSLTFNALIHGLCADGKLKEAT--LLEEKMVKIGLQPTVSTDTILIHRLLK 617

Query: 421 EGNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLT 480
           +G+ D A    ++M  +G  PD + YT++I   C++G LL A  +  +M +  + PDL T
Sbjct: 618 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 677

Query: 481 YSSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIR 514
           YSSLI G  + G    A  V   M + G  P    +  LI+
Sbjct: 678 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715

[Close]
BLAST of CmaCh04G000780 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 251.5 bits (641), Expect = 1.2e-66
Identity = 158/529 (29.87%), Postives = 275/529 (51.98%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRF-PSPFTCNKLVHSLINSGCGELSAKVLF-HFLSKGYTPHSSS 60
           ++ +AL  + HL +   F P   + N ++ + I S      A+ +F   L    +P+  +
Sbjct: 149 LIDKALS-IVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT 208

Query: 61  FNSIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVR 120
           +N +I  FC  GNI  A  + + M   GC P++V+YN+L+ GYC   KI +   L+  + 
Sbjct: 209 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 268

Query: 121 GGLLNPDLVMFNILFNGFAKV-YMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDME 180
              L P+L+ +N++ NG  +   MK  +F+   +  +    + VTY TL+  +CK G+  
Sbjct: 269 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 328

Query: 181 VGNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLI 240
               M  +M++ G+ P+++ ++SLI   CKAG++N A  +L++M+   + PNE TY+TL+
Sbjct: 329 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 388

Query: 241 DGCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIE 300
           DG  ++G +  A  +  EM   G  P+   + ++I+GH   G +++A+  +  M ++ + 
Sbjct: 389 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 448

Query: 301 LDLTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNA 360
            D+ +Y+ V++GF R   + +A+     +V+ G+ PD I  ++++    +    KEA + 
Sbjct: 449 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 508

Query: 361 YRILLARGFEPDTVTLSALIDGLCKNGYLQEARRY--VVKEKA---NEILYTVLIDALCK 420
           Y  +L  G  PD  T +ALI+  C  G L++A +    + EK    + + Y+VLI+ L K
Sbjct: 509 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 568

Query: 421 EGNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLT 480
           +    EA+R + ++     VP    Y + I E C                  NIE    +
Sbjct: 569 QSRTREAKRLLLKLFYEESVPSDVTYHTLI-ENCS-----------------NIE--FKS 628

Query: 481 YSSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNV 522
             SLI G   KG+M EA QVF+ ML     PD  AY+I+I G+   G++
Sbjct: 629 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 656

[Close]
BLAST of CmaCh04G000780 vs. TAIR10
Match: AT5G55840.1 (AT5G55840.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 250.4 bits (638), Expect = 2.6e-66
Identity = 148/528 (28.03%), Postives = 261/528 (49.43%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           M++++L+    +      PS +TCN ++ S++ SG        L   L +   P  ++FN
Sbjct: 178 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN 237

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
            +I+  C  G+ + +  ++  M + G +P IV+YN++LH YC   + + A  L++ ++  
Sbjct: 238 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 297

Query: 121 LLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCL-PNVVTYGTLVDMFCKMGDMEVG 180
            ++ D+  +N+L +   +     + ++ L  M K  + PN VTY TL++ F   G + + 
Sbjct: 298 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 357

Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDG 240
           +++  +M+  G+ PN V F++LIDG+   G+   A      M+   + P+E +Y  L+DG
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417

Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELD 300
            CK    + A   +  M   G+      +T +IDG  K G +D A+  +N M    I+ D
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477

Query: 301 LTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
           +  Y+ +I GF +VGR   A E    + + GL P+ II + ++    + G LKEA+  Y 
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537

Query: 361 ILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEIL-----YTVLIDALCKEG 420
            ++  G   D  T + L+  LCK G + EA  ++    ++ IL     +  LI+     G
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597

Query: 421 NLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYS 480
              +A     EM + G  P  + Y S +  LCK G+L +A    K +       D + Y+
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 657

Query: 481 SLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVV 523
           +L+  + + G + +A  +F +M+   I PDS  Y  LI G   +G  V
Sbjct: 658 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705

[Close]
BLAST of CmaCh04G000780 vs. NCBI nr
Match: gi|778698035|ref|XP_011654465.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X1 [Cucumis sativus])

HSP 1 Score: 909.1 bits (2348), Expect = 3.8e-261
Identity = 440/526 (83.65%), Postives = 483/526 (91.83%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           MVKEALQ+LAHLRR  RFP+PFTCNKL+HSLINSGCG LSAK+LFHFLSKGYTPH SSFN
Sbjct: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
           SIISFFC+ GN+K+AE I  SM RFGCSPDIVSYNSLL GYC+SY+I++ACFLVNRVRG 
Sbjct: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120

Query: 121 LLN-PDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVG 180
            LN PDLVMFNILFNGFAKVYMKNEAFMY GLMWK CLP++VTYGT VDMFCKMGDM++G
Sbjct: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180

Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDG 240
           N+MF DMMKVG+VPNLV FSSLIDGYCKAGSL+VAF Y ERM++CSV+PNEFTYSTLIDG
Sbjct: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELD 300
           C K GML RAD LFE+MLS  ILPNCTV+TSIIDGHFKKGNVD+A+KYIN+MFDR+I+LD
Sbjct: 241 CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD 300

Query: 301 LTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
           LTAYTV+I+GF RVGR  K+MEAAE V KNGLLPDRIILTAIMDVHFKAGN+KEALNAY+
Sbjct: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360

Query: 361 ILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEA 420
           ILLA+GFE D VTLSAL+DGL K+GYLQEARRY+VKE ANEILYTV IDALCKEGNLD+A
Sbjct: 361 ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA 420

Query: 421 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 480
           E+ IKEM EAGFVPDK+VYTSWIAELCKQGNLLKAF VKKRMVQE++EPDLLTYSSLIGG
Sbjct: 421 EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG 480

Query: 481 LAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAIS 526
           LAEKGLMIEAKQVFDDMLN GITPD V+YDILIRGYHNQGN  AIS
Sbjct: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAIS 526

[Close]
BLAST of CmaCh04G000780 vs. NCBI nr
Match: gi|659102971|ref|XP_008452410.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X4 [Cucumis melo])

HSP 1 Score: 894.0 bits (2309), Expect = 1.3e-256
Identity = 438/526 (83.27%), Postives = 479/526 (91.06%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           MVKEALQFLAHLRRISRFPSPFTCNKL+HSLINSGCG LSAK+L H LSKGYTPH SSFN
Sbjct: 1   MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
           SIISFFC+ GN+K+AE+I  SM RFGCSPDIVSYNSLL GYC+S +I++ACFLVNRVRG 
Sbjct: 61  SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120

Query: 121 LLN-PDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVG 180
            LN PDLVMFNILF GFAKVYMKNEAFMYLGLMWK  LP++VTYGT VDMFCKMGDME+G
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180

Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDG 240
           N+MF DMMKVG+VPNL+ FSSLIDGYCKAGSL+VAF Y ERM++CSV+PNEFTYSTLIDG
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELD 300
           C K+GML RAD LFE+MLS  ILPNCTV+TSIIDGHFKKGNVD+A+KYIN+MFD++I+LD
Sbjct: 241 CSKRGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDQDIKLD 300

Query: 301 LTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
           LTAYTV+I+GF RVGR  K+MEAAE V K GLLPDRIILTAIMDVHFKAGN+KEALNAY+
Sbjct: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKKGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360

Query: 361 ILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEA 420
           ILLA+GFE D  TLSAL+DGL K+GYLQ+ARRY VKEKANEILYTV IDALCKEGNLDEA
Sbjct: 361 ILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDALCKEGNLDEA 420

Query: 421 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 480
           E+ IKEM EAGFVPDK+VYTS IAELCKQGNLLKAF VKKRMVQE+IEPDLLTYSSLI G
Sbjct: 421 EKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPDLLTYSSLISG 480

Query: 481 LAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAIS 526
           LAEKGLMIEAKQVFDDMLN GITPD VAYDILIRGYHNQGN  AIS
Sbjct: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVAYDILIRGYHNQGNGAAIS 526

[Close]
BLAST of CmaCh04G000780 vs. NCBI nr
Match: gi|778698039|ref|XP_011654466.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X2 [Cucumis sativus])

HSP 1 Score: 802.7 bits (2072), Expect = 3.9e-229
Identity = 403/526 (76.62%), Postives = 447/526 (84.98%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           MVKEALQ+LAHLRR  RFP+PFTCNKL+HSL                ++ G   H S+  
Sbjct: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSL----------------INSG-CGHLSA-- 60

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
            ++  F   G              FGCSPDIVSYNSLL GYC+SY+I++ACFLVNRVRG 
Sbjct: 61  KLLFHFLSKG--------------FGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120

Query: 121 LLN-PDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVG 180
            LN PDLVMFNILFNGFAKVYMKNEAFMY GLMWK CLP++VTYGT VDMFCKMGDM++G
Sbjct: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180

Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDG 240
           N+MF DMMKVG+VPNLV FSSLIDGYCKAGSL+VAF Y ERM++CSV+PNEFTYSTLIDG
Sbjct: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELD 300
           C K GML RAD LFE+MLS  ILPNCTV+TSIIDGHFKKGNVD+A+KYIN+MFDR+I+LD
Sbjct: 241 CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD 300

Query: 301 LTAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
           LTAYTV+I+GF RVGR  K+MEAAE V KNGLLPDRIILTAIMDVHFKAGN+KEALNAY+
Sbjct: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360

Query: 361 ILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEA 420
           ILLA+GFE D VTLSAL+DGL K+GYLQEARRY+VKE ANEILYTV IDALCKEGNLD+A
Sbjct: 361 ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA 420

Query: 421 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 480
           E+ IKEM EAGFVPDK+VYTSWIAELCKQGNLLKAF VKKRMVQE++EPDLLTYSSLIGG
Sbjct: 421 EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG 480

Query: 481 LAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAIS 526
           LAEKGLMIEAKQVFDDMLN GITPD V+YDILIRGYHNQGN  AIS
Sbjct: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAIS 493

[Close]
BLAST of CmaCh04G000780 vs. NCBI nr
Match: gi|1009154833|ref|XP_015895385.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 [Ziziphus jujuba])

HSP 1 Score: 714.1 bits (1842), Expect = 1.8e-202
Identity = 336/524 (64.12%), Postives = 412/524 (78.63%), Query Frame = 1 

Query: 1   MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
           MV E LQF A LRR S+FPSPFT NKL+HSL++S CGELS K L  FLSKGY PH SSFN
Sbjct: 1   MVSETLQFFAQLRRASKFPSPFTFNKLLHSLVDSNCGELSLKFLSFFLSKGYVPHPSSFN 60

Query: 61  SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
           S++SF CKLGN  +AE++++SMP FGC PD V+YNSL+ GYC ++ I   C ++ ++R G
Sbjct: 61  SVLSFLCKLGNFCFAEKVVDSMPGFGCVPDAVTYNSLIDGYCKNFDIERGCLVLKKIRVG 120

Query: 121 LLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGN 180
             NPD+V FNIL NGF+K+ MK EAF+Y+GLMWK CLPNVVTY T +DMFCKMGD+++G 
Sbjct: 121 HCNPDVVTFNILLNGFSKLKMKKEAFVYMGLMWKCCLPNVVTYSTFIDMFCKMGDLDMGY 180

Query: 181 KMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDGC 240
           K+F DMMK GV PNL+AF+SLIDGYCKAG++ +AF   E+M+Q S+ PN  TY+ LIDG 
Sbjct: 181 KVFSDMMKNGVFPNLIAFTSLIDGYCKAGNVEMAFELFEKMKQSSLSPNVVTYTALIDGL 240

Query: 241 CKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELDL 300
           CK GMLE A+ LF +ML  G+ PN  V+TS+IDG+F KGNVDNA+KY+ +M ++ I  DL
Sbjct: 241 CKHGMLEGAESLFSKMLEDGVEPNSAVYTSMIDGNFVKGNVDNAIKYVIKMREQNIRFDL 300

Query: 301 TAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRI 360
           T + V+I GF + GRL KAME    VV +GL PD+IILT IMD HFK+ NLK ALN YR 
Sbjct: 301 TTFGVIIWGFCKTGRLDKAMEVMGIVVASGLAPDKIILTTIMDAHFKSRNLKAALNLYRE 360

Query: 361 LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAE 420
           LL RGFEPD +TLS L++GLCK+G+LQEARRY  +EKAN+I YTVLID +CKEG  +E E
Sbjct: 361 LLVRGFEPDVITLSTLLNGLCKHGHLQEARRYFCREKANQISYTVLIDGICKEGQFNEVE 420

Query: 421 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 480
             +KEM E GFVPDKYVYTSWIA LCKQGNL++AF +K +MV+E +EPDLLTYSSLI GL
Sbjct: 421 MVLKEMSEVGFVPDKYVYTSWIAGLCKQGNLVEAFRLKNKMVKEGVEPDLLTYSSLISGL 480

Query: 481 AEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAI 525
           A KGLMIEAKQVFD+ML  GITPDS  YDIL+RGY  +G+  A+
Sbjct: 481 ASKGLMIEAKQVFDNMLKMGITPDSAVYDILVRGYLKEGDEAAV 524

[Close]
BLAST of CmaCh04G000780 vs. NCBI nr
Match: gi|645229218|ref|XP_008221361.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 [Prunus mume])

HSP 1 Score: 700.3 bits (1806), Expect = 2.7e-198
Identity = 337/520 (64.81%), Postives = 410/520 (78.85%), Query Frame = 1 

Query: 6   LQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFNSIISF 65
           L+F A LRR S+FP+PFTCNKL+HSLI+S CGELS K+L H LSKGY PH SSFNS+ISF
Sbjct: 283 LKFFALLRRTSQFPTPFTCNKLLHSLISSNCGELSVKILCHLLSKGYNPHPSSFNSVISF 342

Query: 66  FCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGGLLNPD 125
           FCKLG+I +A  +++SMPR+GC PDIV+YNSL+ GYC    I EAC ++ ++R G   PD
Sbjct: 343 FCKLGHISFARTLVDSMPRYGCLPDIVTYNSLIDGYCKFCDIDEACLMMRKIRIGGCRPD 402

Query: 126 LVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGNKMFFD 185
           L  FN+LFNGF KV MK EAF+Y+GLMWKSC PNVVTY T +DMFCK GD+ +G ++  D
Sbjct: 403 LGTFNVLFNGFCKVKMKKEAFVYMGLMWKSCSPNVVTYSTFIDMFCKTGDLGLGYRVLGD 462

Query: 186 MMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDGCCKQGM 245
           M+K GV+PNLVAF+SLIDGYCKAG+L VAF  LE+M+Q S+ PN  TY+ LI G C QGM
Sbjct: 463 MVKDGVLPNLVAFTSLIDGYCKAGNLEVAFELLEKMRQSSLLPNVVTYNALIKGLCMQGM 522

Query: 246 LERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELDLTAYTV 305
            ERAD+LF +M   G+ PN  V+TSIIDGH +KGNVD+A+KY++RM D+   LD+ AY V
Sbjct: 523 SERADYLFSKMWEDGVEPNSAVYTSIIDGHLQKGNVDDAMKYMSRMHDQGFNLDVAAYGV 582

Query: 306 VIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRILLARG 365
           VI+G  +  RL KA+   E++V +GL+PD+++L  IMD +FKAGNLK AL  YR LL RG
Sbjct: 583 VISGLCKNSRLDKAILFIEDMVSSGLVPDQMLLATIMDAYFKAGNLKAALGVYRELLERG 642

Query: 366 FEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAERTIKE 425
           FEPD VTLSAL+DGLCK+G L+EAR Y  KEKANEI Y+VLI+ +CKEGNL E E+  +E
Sbjct: 643 FEPDGVTLSALMDGLCKHGCLKEARGYFCKEKANEISYSVLINGMCKEGNLSEVEKVFRE 702

Query: 426 MCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGLAEKGL 485
           M EAGF+PDKYVYTSWIA LCKQG+L +AF +K +MV+E I PDLLTYSSLI GLA  GL
Sbjct: 703 MSEAGFIPDKYVYTSWIAGLCKQGSLSEAFRLKNKMVKEGIIPDLLTYSSLIFGLANAGL 762

Query: 486 MIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAIS 526
           MIEAKQVFDDML  GITPDS  +DILIRGYH +GN  AIS
Sbjct: 763 MIEAKQVFDDMLKKGITPDSAVFDILIRGYHKEGNDAAIS 802

The following BLAST results are available for this feature:
BLAST of CmaCh04G000780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP141_ARATH3.1e-17053.01Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana GN... [more]
PP143_ARATH1.3e-8031.39Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... [more]
PP445_ARATH6.9e-6929.75Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN... [more]
PP407_ARATH2.1e-6529.87Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PP432_ARATH4.6e-6528.03Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN... [more]
BLAST of CmaCh04G000780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPG7_CUCSA1.6e-19784.42Uncharacterized protein OS=Cucumis sativus GN=Csa_5G021290 PE=4 SV=1[more]
W9R0T6_9ROSA2.1e-19761.71Uncharacterized protein OS=Morus notabilis GN=L484_005539 PE=4 SV=1[more]
A0A061EFM6_THECC5.0e-17557.36Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1 OS=T... [more]
A0A0D2Q7W0_GOSRA4.2e-17456.92Uncharacterized protein OS=Gossypium raimondii GN=B456_002G171900 PE=4 SV=1[more]
V4KT02_EUTSA3.3e-17154.51Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10003932mg PE=4 SV=1[more]
BLAST of CmaCh04G000780 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01740.11.8e-17153.01 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G02150.17.6e-8231.39 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G65560.13.9e-7029.75 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G39710.11.2e-6629.87 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G55840.12.6e-6628.03 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmaCh04G000780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778698035|ref|XP_011654465.1|3.8e-26183.65PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X1 [Cuc... [more]
gi|659102971|ref|XP_008452410.1|1.3e-25683.27PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X4 [Cuc... [more]
gi|778698039|ref|XP_011654466.1|3.9e-22976.62PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X2 [Cuc... [more]
gi|1009154833|ref|XP_015895385.1|1.8e-20264.12PREDICTED: pentatricopeptide repeat-containing protein At2g01740 [Ziziphus jujub... [more]
gi|645229218|ref|XP_008221361.1|2.7e-19864.81PREDICTED: pentatricopeptide repeat-containing protein At2g01740 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G000780.1CmaCh04G000780.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 302..321
score: 1.1coord: 268..294
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 155..186
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 333..382
score: 3.0E-9coord: 472..515
score: 1.4E-10coord: 55..102
score: 6.4E-12coord: 193..242
score: 2.7E-16coord: 399..447
score: 1.3
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 58..91
score: 8.5E-8coord: 338..370
score: 4.7E-4coord: 436..469
score: 4.2E-6coord: 196..230
score: 4.1E-7coord: 402..434
score: 2.0E-10coord: 472..505
score: 3.3E-7coord: 161..194
score: 2.7E-7coord: 231..265
score: 1.4E-10coord: 267..299
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 399..433
score: 13.088coord: 229..263
score: 13.581coord: 20..54
score: 7.662coord: 194..228
score: 11.17coord: 434..468
score: 9.986coord: 55..89
score: 11.082coord: 264..298
score: 8.55coord: 369..396
score: 6.412coord: 125..155
score: 6.226coord: 90..124
score: 8.923coord: 504..539
score: 5.59coord: 159..193
score: 11.63coord: 469..503
score: 12.079coord: 334..368
score: 9.175coord: 299..333
score: 9
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 396..432
score: 2.0E-7coord: 197..364
score: 2.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..520
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G000780Cla002193Watermelon (97103) v1cmawmB684
CmaCh04G000780Csa5G021290Cucumber (Chinese Long) v2cmacuB736
CmaCh04G000780MELO3C016659Melon (DHL92) v3.5.1cmameB708
CmaCh04G000780ClCG07G005540Watermelon (Charleston Gray)cmawcgB674
CmaCh04G000780CSPI05G00530Wild cucumber (PI 183967)cmacpiB740
CmaCh04G000780CmoCh04G000750Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G000780Lsi04G010990Bottle gourd (USVL1VR-Ls)cmalsiB680
CmaCh04G000780Cp4.1LG01g06140Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G000780CsaV3_5G014350Cucumber (Chinese Long) v3cmacucB0873
CmaCh04G000780Cla97C07G133860Watermelon (97103) v2cmawmbB781
CmaCh04G000780Bhi07G000365Wax gourdcmawgoB0890
CmaCh04G000780CsGy5G010770Cucumber (Gy14) v2cgybcmaB660
CmaCh04G000780Carg22022Silver-seed gourdcarcmaB0242
CmaCh04G000780Carg27443Silver-seed gourdcarcmaB1344
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G000780Cucumber (Chinese Long) v3cmacucB0894
CmaCh04G000780Watermelon (97103) v2cmawmbB709
CmaCh04G000780Wax gourdcmawgoB0830
CmaCh04G000780Cucurbita maxima (Rimu)cmacmaB531
CmaCh04G000780Cucurbita moschata (Rifu)cmacmoB730
CmaCh04G000780Melon (DHL92) v3.5.1cmameB639
CmaCh04G000780Watermelon (Charleston Gray)cmawcgB636
CmaCh04G000780Watermelon (97103) v1cmawmB713
CmaCh04G000780Cucurbita pepo (Zucchini)cmacpeB722
CmaCh04G000780Melon (DHL92) v3.6.1cmamedB797
CmaCh04G000780Silver-seed gourdcarcmaB0949