BLAST of Cp4.1LG01g06140 vs. Swiss-Prot
Match:
PP141_ARATH (Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1)
HSP 1 Score: 605.1 bits (1559), Expect = 7.4e-172
Identity = 285/532 (53.57%), Postives = 389/532 (73.12%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
MV+EALQFL+ LR+ S P PFTCNK +H LINS CG LS K L + +S+GYTPH SSFN
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVR-- 120
S++SF CKLG +K+AE I++SMPRFGC PD++SYNSL+ G+C + IR A ++ +R
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 121 -GGVLNPDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDME 180
G + PD+V FN LFNGF+K M +E F+Y+G+M K C PNVVTY T +D FCK G+++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 181 VGNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLI 240
+ K F M + + PN+V F+ LIDGYCKAG L+VA + M++ + N TY+ LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 241 DGCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIG 300
DG CK+G ++RA+ ++ M+ + PN V+T+IIDG F++G+ DNA+K++ +M ++ +
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 301 LDLTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNA 360
LD+TAY V+ISG G+L +A E E++ K+ L+PD +I T +M+ +FK+G +K A+N
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 361 YRILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLD 420
Y L+ RGFEPD V LST+IDG+ KNG L EA Y EKAN+++YTVLIDALCKEG+
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420
Query: 421 EAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLI 480
E ER ++ EAG VPDK++YTSWIA LCKQGNL+ AF +K RMVQE + DLL Y++LI
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 481 GGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDLVL 530
GLA KGLM+EA+QVFD+MLN+GI+PDS +D+LIR Y +GN+ A SDL+L
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
BLAST of Cp4.1LG01g06140 vs. Swiss-Prot
Match:
PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1)
HSP 1 Score: 301.2 bits (770), Expect = 2.3e-80
Identity = 172/548 (31.39%), Postives = 282/548 (51.46%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
M++EA+Q + ++R FP +CN L+H G + + + G P ++N
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
+I CK G+++ A + M G PD V+YNS++ G+ ++ + ++
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326
Query: 121 VLNPDLVMFNILFNGFAK-AYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVG 180
PD++ +N L N F K + Y + PNVV+Y TLVD FCK G M+
Sbjct: 327 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDG 240
K + DM +VG+VPN ++SLID CK G+L AF M Q V+ N TY+ LIDG
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446
Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLD 300
C ++ A+ LF +M + G++PN + ++I G K N+D AL+ +N + R I D
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Query: 301 LTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
L Y I G + ++ A + + G+ + +I T +MD +FK+GN E L+
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 361 ILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVK------EKANEILYTVLIDALCKE 420
+ E VT LIDGLCKN + +A Y + +AN ++T +ID LCK+
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 421 GNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTY 480
++ A ++M + G VPD+ YTS + KQGN+L+A ++ +M + ++ DLL Y
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Query: 481 SSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQG---NVVAISDLVLL 539
+SL+ GL+ + +A+ ++M+ GI PD V +++ ++ G V + ++
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
BLAST of Cp4.1LG01g06140 vs. Swiss-Prot
Match:
PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 265.8 bits (678), Expect = 1.1e-69
Identity = 154/521 (29.56%), Postives = 273/521 (52.40%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
+V E Q + P+ +T NK+V+ G E + + + + G P ++
Sbjct: 198 LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYT 257
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
S+I +C+ ++ A ++ N MP GC + V+Y L+HG C + +I EA L +++
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 317
Query: 121 VLNPDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCL-PNVVTYGTLVDMFCKMGDMEVG 180
P + + +L + K+EA + M ++ + PN+ TY L+D C E
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDG 240
++ M++ G++PN++ +++LI+GYCK G ++ A +E M+ + PN TY+ LI G
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLD 300
CK + +A + +ML +LP+ + S+IDG + GN D+A + ++ M DR + D
Sbjct: 438 YCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 497
Query: 301 LTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
YT +I + R+ +A + +++ + G+ P+ ++ TA++D + KAG + EA
Sbjct: 498 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 557
Query: 361 ILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEI-------LYTVLIDALCK 420
+L++ P+++T + LI GLC +G L+EA +++EK +I T+LI L K
Sbjct: 558 KMLSKNCLPNSLTFNALIHGLCADGKLKEAT--LLEEKMVKIGLQPTVSTDTILIHRLLK 617
Query: 421 EGNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLT 480
+G+ D A ++M +G PD + YT++I C++G LL A + +M + + PDL T
Sbjct: 618 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 677
Query: 481 YSSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIR 514
YSSLI G + G A V M + G P + LI+
Sbjct: 678 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
BLAST of Cp4.1LG01g06140 vs. Swiss-Prot
Match:
PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 255.8 bits (652), Expect = 1.1e-66
Identity = 158/529 (29.87%), Postives = 275/529 (51.98%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGF-PSPFTCNKLVHSLINSGCGELSAKVLF-HFLSKGYTPHASS 60
++ +AL + HL + GF P + N ++ + I S A+ +F L +P+ +
Sbjct: 149 LIDKALS-IVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT 208
Query: 61 FNSIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVR 120
+N +I FC GNI A + + M GC P++V+YN+L+ GYC KI + L+ +
Sbjct: 209 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 268
Query: 121 GGVLNPDLVMFNILFNGFAK-AYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDME 180
L P+L+ +N++ NG + MK +F+ + + + VTY TL+ +CK G+
Sbjct: 269 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 328
Query: 181 VGNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLI 240
M +M++ G+ P+++ ++SLI CKAG+++ A +L++M+ + PNE TY+TL+
Sbjct: 329 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 388
Query: 241 DGCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIG 300
DG ++G + A + EM G P+ + ++I+GH G +++A+ + M ++ +
Sbjct: 389 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 448
Query: 301 LDLTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNA 360
D+ +Y+ V+SGF R + +A+ +V+ G+ PD I ++++ + KEA +
Sbjct: 449 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 508
Query: 361 YRILLARGFEPDTVTLSTLIDGLCKNGYLQEARRY--VVKEKA---NEILYTVLIDALCK 420
Y +L G PD T + LI+ C G L++A + + EK + + Y+VLI+ L K
Sbjct: 509 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 568
Query: 421 EGNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLT 480
+ EA+R + ++ VP Y + I E C NIE +
Sbjct: 569 QSRTREAKRLLLKLFYEESVPSDVTYHTLI-ENCS-----------------NIE--FKS 628
Query: 481 YSSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNV 522
SLI G KG+M EA QVF+ ML PD AY+I+I G+ G++
Sbjct: 629 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 656
BLAST of Cp4.1LG01g06140 vs. Swiss-Prot
Match:
PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN=At5g55840 PE=3 SV=2)
HSP 1 Score: 254.6 bits (649), Expect = 2.5e-66
Identity = 151/529 (28.54%), Postives = 265/529 (50.09%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGF-PSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSF 60
M++++L+ L + GF PS +TCN ++ S++ SG L L + P ++F
Sbjct: 138 MIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATF 197
Query: 61 NSIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRG 120
N +I+ C G+ + + ++ M + G +P IV+YN++LH YC + + A L++ ++
Sbjct: 198 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 257
Query: 121 GVLNPDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCL-PNVVTYGTLVDMFCKMGDMEV 180
++ D+ +N+L + ++ + ++ L M K + PN VTY TL++ F G + +
Sbjct: 258 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 317
Query: 181 GNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLID 240
+++ +M+ G+ PN V F++LIDG+ G+ A M+ + P+E +Y L+D
Sbjct: 318 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 377
Query: 241 GCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGL 300
G CK + A + M G+ +T +IDG K G +D A+ +N M I
Sbjct: 378 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 437
Query: 301 DLTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAY 360
D+ Y+ +I+GF +VGR A E + + GL P+ II + ++ + G LKEA+ Y
Sbjct: 438 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 497
Query: 361 RILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEIL-----YTVLIDALCKE 420
++ G D T + L+ LCK G + EA ++ ++ IL + LI+
Sbjct: 498 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 557
Query: 421 GNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTY 480
G +A EM + G P + Y S + LCK G+L +A K + D + Y
Sbjct: 558 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 617
Query: 481 SSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVV 523
++L+ + + G + +A +F +M+ I PDS Y LI G +G V
Sbjct: 618 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
BLAST of Cp4.1LG01g06140 vs. TrEMBL
Match:
A0A0A0KPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G021290 PE=4 SV=1)
HSP 1 Score: 698.0 bits (1800), Expect = 9.4e-198
Identity = 337/400 (84.25%), Postives = 366/400 (91.50%), Query Frame = 1
Query: 128 MFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGNKMFFDMM 187
MFNILFNGFAK YMKNEAFMY GLMWK CLP++VTYGT VDMFCKMGDM++GN+MF DMM
Sbjct: 1 MFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMGNRMFLDMM 60
Query: 188 KVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDGCCKQGMLE 247
KVG+VPNLV FSSLIDGYCKAGSLDVAF Y ERM++CSV+PNEFTYSTLIDGC K GML
Sbjct: 61 KVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKHGMLA 120
Query: 248 RADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLDLTAYTVVI 307
RAD LFE+MLS ILPNCTV+TSIIDGHFKKGNVD+A+KYIN+MFDR+I LDLTAYTV+I
Sbjct: 121 RADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTAYTVII 180
Query: 308 SGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRILLARGFE 367
SGF RVGR K+MEAAE V KNGLLPDRIILTAIMDVHFKAGN+KEALNAY+ILLA+GFE
Sbjct: 181 SGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYKILLAKGFE 240
Query: 368 PDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAERTIKEMC 427
D VTLS L+DGL K+GYLQEARRY+VKE ANEILYTV IDALCKEGNLD+AE+ IKEM
Sbjct: 241 ADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDAEKMIKEMS 300
Query: 428 EAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGLAEKGLMI 487
EAGFVPDK+VYTSWIAELCKQGNLLKAF VKKRMVQE++EPDLLTYSSLIGGLAEKGLMI
Sbjct: 301 EAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGGLAEKGLMI 360
Query: 488 EAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDL 528
EAKQVFDDMLN GITPD V+YDILIRGYHNQGN AIS L
Sbjct: 361 EAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGL 400
BLAST of Cp4.1LG01g06140 vs. TrEMBL
Match:
W9R0T6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005539 PE=4 SV=1)
HSP 1 Score: 697.2 bits (1798), Expect = 1.6e-197
Identity = 324/527 (61.48%), Postives = 411/527 (77.99%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
MV+E LQF AHLRR S FP+PFT NKL+H L ++ CG+LS K+L HFL+K Y PH SSFN
Sbjct: 1 MVRETLQFFAHLRRTSRFPTPFTFNKLLHHLTSANCGDLSLKILSHFLTKRYVPHPSSFN 60
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
S++SF CK G +++A +++SMP+FG SPD+V+YN L+ G+C + + EACF+V+++R G
Sbjct: 61 SVLSFLCKSGQLRFARNVVDSMPKFGFSPDVVTYNCLVDGFCKNLDVEEACFVVSKMRMG 120
Query: 121 VLNPDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGN 180
PDLV FN LFNGF+K M+ EAF+Y+GLMWK CLPNVVTY T VDMFCK+G+ ++G
Sbjct: 121 KCGPDLVTFNTLFNGFSKTRMEREAFVYMGLMWKCCLPNVVTYSTFVDMFCKVGNFDLGY 180
Query: 181 KMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDGC 240
K+F DM+ GV+PN V F++L+DGYCKAG+LD+AF M++ SV PN TY+ L+DG
Sbjct: 181 KVFRDMVNAGVLPNSVVFTALLDGYCKAGNLDIAFELFVEMKRSSVSPNVVTYAALVDGF 240
Query: 241 CKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLDL 300
CK+G LERA+ LF +ML G+ PN V+TSIIDGHF KGNVD+A+KY+ +M D+ + LD+
Sbjct: 241 CKRGALERAESLFSKMLEDGVEPNSVVYTSIIDGHFVKGNVDDAVKYMTKMCDQGLRLDM 300
Query: 301 TAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRI 360
TAY VVI GF + GRL KAME ++ ++GL PD+I+LT +MD HFK+G+LK AL YR
Sbjct: 301 TAYEVVIRGFCKNGRLDKAMEVMRSMTESGLFPDKIMLTTVMDAHFKSGDLKRALEVYRE 360
Query: 361 LLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAE 420
+L RGFEPD VTLS+++DGL K G+LQEAR Y+ +EKANEI YTVLID +CKEG+ E E
Sbjct: 361 ILFRGFEPDIVTLSSIMDGLSKKGHLQEARGYLCREKANEISYTVLIDGMCKEGHFGEVE 420
Query: 421 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 480
+EM EAGFVPDKY YTSWIA LCKQG L++AF +K RM QE IEPDLLTYSSLI GL
Sbjct: 421 MVFREMSEAGFVPDKYAYTSWIAGLCKQGKLVEAFVLKNRMAQEGIEPDLLTYSSLIFGL 480
Query: 481 AEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDL 528
A KGLM+EAKQVFDDML GI+PDS YDILIRGY +GN VA+S +
Sbjct: 481 ANKGLMVEAKQVFDDMLKRGISPDSAVYDILIRGYLKEGNEVAVSGM 527
BLAST of Cp4.1LG01g06140 vs. TrEMBL
Match:
A0A061EFM6_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_011056 PE=4 SV=1)
HSP 1 Score: 624.0 bits (1608), Expect = 1.7e-175
Identity = 302/523 (57.74%), Postives = 373/523 (71.32%), Query Frame = 1
Query: 6 LQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFNSIISF 65
LQF + L++ S +P PF NKL+H L S CG LS K+L FLSKGYTPH SSFNS ISF
Sbjct: 43 LQFCSQLKKTSKYPDPFFFNKLLHRLTASNCGTLSLKLLSFFLSKGYTPHPSSFNSSISF 102
Query: 66 FCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGGVLNPD 125
CKLG YA++++NSMP +GC PDI +YNSL+ GY + +AC + + +R G PD
Sbjct: 103 LCKLGRSDYAQKLVNSMPFYGCEPDIATYNSLIDGYFKCGDVVKACLVFDDIRAGKCKPD 162
Query: 126 LVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGNKMFFD 185
LV FN LFNGF K E F+Y+G MWK CLPNV+TY T +DMFCK+GD+++G K+F D
Sbjct: 163 LVTFNALFNGFCKMRRNKEVFVYMGYMWKCCLPNVITYSTWIDMFCKLGDLKMGFKVFRD 222
Query: 186 MMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDGCCKQGM 245
M K GV N + F+ LIDG CK G ++AF M+Q + N TY+ LIDG CK+GM
Sbjct: 223 MKKDGVSLNSIVFTCLIDGCCKVGDFELAFELYWEMKQTKLALNVVTYTALIDGLCKKGM 282
Query: 246 LERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLDLTAYTV 305
LERA+ LF ML + PN V+TSIIDGHFKK NV +ALKY+ +M + I D+ Y V
Sbjct: 283 LERAECLFLRMLKDKVQPNSVVYTSIIDGHFKKRNVSDALKYLAKMCVQGIKFDMALYGV 342
Query: 306 VISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRILLARG 365
+ISG GR KA + EN+VK+GLLPD+++LT +MD HFKAGN+K AL+ Y LLARG
Sbjct: 343 IISGLSNCGRFDKASKFMENMVKSGLLPDKLLLTTMMDAHFKAGNVKAALDVYGELLARG 402
Query: 366 FEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAERTIKE 425
F+PD V LS+L+DGLCK G L EA Y +EKANEI YTVLID L K+G+ E R +E
Sbjct: 403 FDPDVVVLSSLMDGLCKRGCLHEAESYFCREKANEISYTVLIDGLAKKGDFTEVNRVFRE 462
Query: 426 MCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGLAEKGL 485
M EAGF PDKYVYTSWIA LC+QGNL++AF +K RMVQE +PDLLTYSSLI GLA KGL
Sbjct: 463 MLEAGFTPDKYVYTSWIAGLCEQGNLIEAFRLKNRMVQEGFQPDLLTYSSLIFGLANKGL 522
Query: 486 MIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDLV 529
MIEAKQ+F DML ITPD+ YDI+IRGY Q N A+S+L+
Sbjct: 523 MIEAKQIFQDMLKRKITPDAAVYDIMIRGYLQQNNEAAVSELL 565
BLAST of Cp4.1LG01g06140 vs. TrEMBL
Match:
A0A0D2Q7W0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G171900 PE=4 SV=1)
HSP 1 Score: 617.1 bits (1590), Expect = 2.1e-173
Identity = 295/523 (56.41%), Postives = 375/523 (71.70%), Query Frame = 1
Query: 6 LQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFNSIISF 65
LQF + L++ S +P P++ NKL+H L S CG LS K+L FLSKGYTPH SSFNS ISF
Sbjct: 40 LQFFSDLKKTSKYPDPYSFNKLLHKLTASDCGALSLKLLSFFLSKGYTPHPSSFNSTISF 99
Query: 66 FCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGGVLNPD 125
FCKLG YA++++N MP +GC PDI +YNSL+ GY ++ +AC +VN +R PD
Sbjct: 100 FCKLGQSSYAQKLVNLMPLYGCEPDIATYNSLIDGYFKCGEVVKACLIVNEIRVDKCKPD 159
Query: 126 LVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGNKMFFD 185
LV FN+LFNGF K K EAF+Y+GLMWK CLPNVVTY T +DMFCK+GD+ +G K+F D
Sbjct: 160 LVTFNVLFNGFCKMRKKKEAFVYMGLMWKCCLPNVVTYSTWIDMFCKVGDLNMGVKVFRD 219
Query: 186 MMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDGCCKQGM 245
M K V+ N + F+ LIDGYCK G + AF + M+ + N TY+ LIDG CK+GM
Sbjct: 220 MKKDKVLLNSIVFTCLIDGYCKVGDFEAAFELCKEMKLVKLAVNVVTYTALIDGLCKKGM 279
Query: 246 LERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLDLTAYTV 305
LERA+ LF ML + PN V+TSIID HFKK NV +ALKY+ +M+ + + D+ AY V
Sbjct: 280 LERAECLFFRMLKDKVKPNSVVYTSIIDAHFKKSNVTDALKYLGKMYVQGLEFDMAAYGV 339
Query: 306 VISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRILLARG 365
+I+G G KA EN+VK+GL PD+++LT IMD HFKAGN+K ALN Y +LARG
Sbjct: 340 IIAGLCNTGMFDKASIYMENMVKSGLRPDKLMLTTIMDAHFKAGNVKAALNVYGEILARG 399
Query: 366 FEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAERTIKE 425
F+PD + L++L+DGLCK+G L EA Y + KAN+I YTVLI+ L K+G+ E R +E
Sbjct: 400 FDPDVIVLTSLMDGLCKHGCLNEAESYFCRGKANKISYTVLINGLAKKGDFTELNRVFRE 459
Query: 426 MCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGLAEKGL 485
M EAGF DKYVYTSWIA LC+QGNL++AF VK RMVQE +PDLLTYSSLI GLA KGL
Sbjct: 460 MLEAGFTADKYVYTSWIAGLCEQGNLIEAFRVKNRMVQEGFQPDLLTYSSLIFGLANKGL 519
Query: 486 MIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDLV 529
MIEAKQ+F+DML ITPD+ Y+I+IRGY Q N A++ L+
Sbjct: 520 MIEAKQIFEDMLKRQITPDAAVYEIMIRGYLRQDNEAAVTGLL 562
BLAST of Cp4.1LG01g06140 vs. TrEMBL
Match:
V4KT02_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10003932mg PE=4 SV=1)
HSP 1 Score: 614.4 bits (1583), Expect = 1.4e-172
Identity = 293/532 (55.08%), Postives = 388/532 (72.93%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
MV+EALQF++ LR+ S P P TCNK +H LINS CG LS K L + LS+GYTPH SSFN
Sbjct: 1 MVREALQFISRLRKSSNLPDPITCNKYIHQLINSNCGVLSLKFLAYLLSRGYTPHRSSFN 60
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVR-- 120
S+ SF CKLG +K+AE I++SMPRFGC PD+VSYNSL+ G+C + +IR A ++ R+R
Sbjct: 61 SVASFVCKLGQVKFAEYIVHSMPRFGCLPDVVSYNSLIDGHCRNGEIRSASLVLKRLRAS 120
Query: 121 -GGVLNPDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDME 180
G + PD+V FN LFNGF+K M E F+Y+G+M K C PNVVTY T +D FCK G+++
Sbjct: 121 HGFMCRPDIVSFNSLFNGFSKMKMLKEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 181 VGNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLI 240
+ K F M K + PN+V F+ LIDGYCKAG L+VA E M++ + N TY+ L+
Sbjct: 181 LALKSFNCMKKDALSPNVVTFTCLIDGYCKAGDLEVAVSLYEDMRRVQMSLNVVTYTALL 240
Query: 241 DGCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIG 300
DG CK+G +ERA+ L+ M + PN V+T+IIDG+F KG+ DNA+K++ +M ++ +
Sbjct: 241 DGFCKRGEMERAEGLYSRMHEDKVEPNSLVYTTIIDGYFHKGDADNAMKFLAKMLNQGMR 300
Query: 301 LDLTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNA 360
LD+ AY V+ISG G+L +A E E++ K GL+PD++ILT +MD +FK+G +K ALN
Sbjct: 301 LDIAAYGVIISGLCGNGKLKEATEVVEDMEKGGLVPDKMILTTMMDAYFKSGLMKAALNV 360
Query: 361 YRILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLD 420
YR + RGFEPD V L+TLIDGL KNG L EA Y KEKAN+++YTVLIDALCKEG+
Sbjct: 361 YREFIERGFEPDVVALTTLIDGLAKNGQLHEAIAYFCKEKANDVMYTVLIDALCKEGDFI 420
Query: 421 EAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLI 480
E ER ++ EAG VPDK++YTSWIA LCKQGNL+ AF +K +MVQE ++ DLLTY++LI
Sbjct: 421 EVERFFSKILEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLKLDLLTYTTLI 480
Query: 481 GGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDLVL 530
GLA KGLM+EA+QVFD+ML +G +PDS +D+LIR Y +GN+ A SDL L
Sbjct: 481 NGLASKGLMVEARQVFDEMLRSGTSPDSAVFDLLIRAYEKEGNMTAASDLFL 532
BLAST of Cp4.1LG01g06140 vs. TAIR10
Match:
AT2G01740.1 (AT2G01740.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 605.1 bits (1559), Expect = 4.2e-173
Identity = 285/532 (53.57%), Postives = 389/532 (73.12%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
MV+EALQFL+ LR+ S P PFTCNK +H LINS CG LS K L + +S+GYTPH SSFN
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVR-- 120
S++SF CKLG +K+AE I++SMPRFGC PD++SYNSL+ G+C + IR A ++ +R
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 121 -GGVLNPDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDME 180
G + PD+V FN LFNGF+K M +E F+Y+G+M K C PNVVTY T +D FCK G+++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 181 VGNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLI 240
+ K F M + + PN+V F+ LIDGYCKAG L+VA + M++ + N TY+ LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 241 DGCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIG 300
DG CK+G ++RA+ ++ M+ + PN V+T+IIDG F++G+ DNA+K++ +M ++ +
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 301 LDLTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNA 360
LD+TAY V+ISG G+L +A E E++ K+ L+PD +I T +M+ +FK+G +K A+N
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 361 YRILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLD 420
Y L+ RGFEPD V LST+IDG+ KNG L EA Y EKAN+++YTVLIDALCKEG+
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420
Query: 421 EAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLI 480
E ER ++ EAG VPDK++YTSWIA LCKQGNL+ AF +K RMVQE + DLL Y++LI
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 481 GGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDLVL 530
GLA KGLM+EA+QVFD+MLN+GI+PDS +D+LIR Y +GN+ A SDL+L
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
BLAST of Cp4.1LG01g06140 vs. TAIR10
Match:
AT2G02150.1 (AT2G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 301.2 bits (770), Expect = 1.3e-81
Identity = 172/548 (31.39%), Postives = 282/548 (51.46%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
M++EA+Q + ++R FP +CN L+H G + + + G P ++N
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
+I CK G+++ A + M G PD V+YNS++ G+ ++ + ++
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326
Query: 121 VLNPDLVMFNILFNGFAK-AYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVG 180
PD++ +N L N F K + Y + PNVV+Y TLVD FCK G M+
Sbjct: 327 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDG 240
K + DM +VG+VPN ++SLID CK G+L AF M Q V+ N TY+ LIDG
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446
Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLD 300
C ++ A+ LF +M + G++PN + ++I G K N+D AL+ +N + R I D
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Query: 301 LTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
L Y I G + ++ A + + G+ + +I T +MD +FK+GN E L+
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 361 ILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVK------EKANEILYTVLIDALCKE 420
+ E VT LIDGLCKN + +A Y + +AN ++T +ID LCK+
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 421 GNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTY 480
++ A ++M + G VPD+ YTS + KQGN+L+A ++ +M + ++ DLL Y
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Query: 481 SSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQG---NVVAISDLVLL 539
+SL+ GL+ + +A+ ++M+ GI PD V +++ ++ G V + ++
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
BLAST of Cp4.1LG01g06140 vs. TAIR10
Match:
AT5G65560.1 (AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 265.8 bits (678), Expect = 6.0e-71
Identity = 154/521 (29.56%), Postives = 273/521 (52.40%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
+V E Q + P+ +T NK+V+ G E + + + + G P ++
Sbjct: 198 LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYT 257
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
S+I +C+ ++ A ++ N MP GC + V+Y L+HG C + +I EA L +++
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 317
Query: 121 VLNPDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCL-PNVVTYGTLVDMFCKMGDMEVG 180
P + + +L + K+EA + M ++ + PN+ TY L+D C E
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDG 240
++ M++ G++PN++ +++LI+GYCK G ++ A +E M+ + PN TY+ LI G
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLD 300
CK + +A + +ML +LP+ + S+IDG + GN D+A + ++ M DR + D
Sbjct: 438 YCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 497
Query: 301 LTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
YT +I + R+ +A + +++ + G+ P+ ++ TA++D + KAG + EA
Sbjct: 498 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 557
Query: 361 ILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEI-------LYTVLIDALCK 420
+L++ P+++T + LI GLC +G L+EA +++EK +I T+LI L K
Sbjct: 558 KMLSKNCLPNSLTFNALIHGLCADGKLKEAT--LLEEKMVKIGLQPTVSTDTILIHRLLK 617
Query: 421 EGNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLT 480
+G+ D A ++M +G PD + YT++I C++G LL A + +M + + PDL T
Sbjct: 618 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 677
Query: 481 YSSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIR 514
YSSLI G + G A V M + G P + LI+
Sbjct: 678 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
BLAST of Cp4.1LG01g06140 vs. TAIR10
Match:
AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 255.8 bits (652), Expect = 6.2e-68
Identity = 158/529 (29.87%), Postives = 275/529 (51.98%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGF-PSPFTCNKLVHSLINSGCGELSAKVLF-HFLSKGYTPHASS 60
++ +AL + HL + GF P + N ++ + I S A+ +F L +P+ +
Sbjct: 149 LIDKALS-IVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT 208
Query: 61 FNSIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVR 120
+N +I FC GNI A + + M GC P++V+YN+L+ GYC KI + L+ +
Sbjct: 209 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 268
Query: 121 GGVLNPDLVMFNILFNGFAK-AYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDME 180
L P+L+ +N++ NG + MK +F+ + + + VTY TL+ +CK G+
Sbjct: 269 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 328
Query: 181 VGNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLI 240
M +M++ G+ P+++ ++SLI CKAG+++ A +L++M+ + PNE TY+TL+
Sbjct: 329 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 388
Query: 241 DGCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIG 300
DG ++G + A + EM G P+ + ++I+GH G +++A+ + M ++ +
Sbjct: 389 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 448
Query: 301 LDLTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNA 360
D+ +Y+ V+SGF R + +A+ +V+ G+ PD I ++++ + KEA +
Sbjct: 449 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 508
Query: 361 YRILLARGFEPDTVTLSTLIDGLCKNGYLQEARRY--VVKEKA---NEILYTVLIDALCK 420
Y +L G PD T + LI+ C G L++A + + EK + + Y+VLI+ L K
Sbjct: 509 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 568
Query: 421 EGNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLT 480
+ EA+R + ++ VP Y + I E C NIE +
Sbjct: 569 QSRTREAKRLLLKLFYEESVPSDVTYHTLI-ENCS-----------------NIE--FKS 628
Query: 481 YSSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNV 522
SLI G KG+M EA QVF+ ML PD AY+I+I G+ G++
Sbjct: 629 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 656
BLAST of Cp4.1LG01g06140 vs. TAIR10
Match:
AT5G55840.1 (AT5G55840.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 254.6 bits (649), Expect = 1.4e-67
Identity = 151/529 (28.54%), Postives = 265/529 (50.09%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGF-PSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSF 60
M++++L+ L + GF PS +TCN ++ S++ SG L L + P ++F
Sbjct: 178 MIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATF 237
Query: 61 NSIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRG 120
N +I+ C G+ + + ++ M + G +P IV+YN++LH YC + + A L++ ++
Sbjct: 238 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 297
Query: 121 GVLNPDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCL-PNVVTYGTLVDMFCKMGDMEV 180
++ D+ +N+L + ++ + ++ L M K + PN VTY TL++ F G + +
Sbjct: 298 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 357
Query: 181 GNKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLID 240
+++ +M+ G+ PN V F++LIDG+ G+ A M+ + P+E +Y L+D
Sbjct: 358 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 417
Query: 241 GCCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGL 300
G CK + A + M G+ +T +IDG K G +D A+ +N M I
Sbjct: 418 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 477
Query: 301 DLTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAY 360
D+ Y+ +I+GF +VGR A E + + GL P+ II + ++ + G LKEA+ Y
Sbjct: 478 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 537
Query: 361 RILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEIL-----YTVLIDALCKE 420
++ G D T + L+ LCK G + EA ++ ++ IL + LI+
Sbjct: 538 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 597
Query: 421 GNLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTY 480
G +A EM + G P + Y S + LCK G+L +A K + D + Y
Sbjct: 598 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 657
Query: 481 SSLIGGLAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVV 523
++L+ + + G + +A +F +M+ I PDS Y LI G +G V
Sbjct: 658 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
BLAST of Cp4.1LG01g06140 vs. NCBI nr
Match:
gi|778698035|ref|XP_011654465.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X1 [Cucumis sativus])
HSP 1 Score: 908.3 bits (2346), Expect = 6.5e-261
Identity = 440/528 (83.33%), Postives = 480/528 (90.91%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
MVKEALQ+LAHLRR FP+PFTCNKL+HSLINSGCG LSAK+LFHFLSKGYTPH SSFN
Sbjct: 1 MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
SIISFFC+ GN+K+AE I SM RFGCSPDIVSYNSLL GYC+SY+I++ACFLVNRVRG
Sbjct: 61 SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
Query: 121 VLN-PDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVG 180
LN PDLVMFNILFNGFAK YMKNEAFMY GLMWK CLP++VTYGT VDMFCKMGDM++G
Sbjct: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDG 240
N+MF DMMKVG+VPNLV FSSLIDGYCKAGSLDVAF Y ERM++CSV+PNEFTYSTLIDG
Sbjct: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240
Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLD 300
C K GML RAD LFE+MLS ILPNCTV+TSIIDGHFKKGNVD+A+KYIN+MFDR+I LD
Sbjct: 241 CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD 300
Query: 301 LTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
LTAYTV+ISGF RVGR K+MEAAE V KNGLLPDRIILTAIMDVHFKAGN+KEALNAY+
Sbjct: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360
Query: 361 ILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEA 420
ILLA+GFE D VTLS L+DGL K+GYLQEARRY+VKE ANEILYTV IDALCKEGNLD+A
Sbjct: 361 ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA 420
Query: 421 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 480
E+ IKEM EAGFVPDK+VYTSWIAELCKQGNLLKAF VKKRMVQE++EPDLLTYSSLIGG
Sbjct: 421 EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG 480
Query: 481 LAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDL 528
LAEKGLMIEAKQVFDDMLN GITPD V+YDILIRGYHNQGN AIS L
Sbjct: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGL 528
BLAST of Cp4.1LG01g06140 vs. NCBI nr
Match:
gi|659102971|ref|XP_008452410.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X4 [Cucumis melo])
HSP 1 Score: 893.3 bits (2307), Expect = 2.2e-256
Identity = 438/528 (82.95%), Postives = 476/528 (90.15%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
MVKEALQFLAHLRRIS FPSPFTCNKL+HSLINSGCG LSAK+L H LSKGYTPH SSFN
Sbjct: 1 MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
SIISFFC+ GN+K+AE+I SM RFGCSPDIVSYNSLL GYC+S +I++ACFLVNRVRG
Sbjct: 61 SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120
Query: 121 VLN-PDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVG 180
LN PDLVMFNILF GFAK YMKNEAFMYLGLMWK LP++VTYGT VDMFCKMGDME+G
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180
Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDG 240
N+MF DMMKVG+VPNL+ FSSLIDGYCKAGSLDVAF Y ERM++CSV+PNEFTYSTLIDG
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240
Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLD 300
C K+GML RAD LFE+MLS ILPNCTV+TSIIDGHFKKGNVD+A+KYIN+MFD++I LD
Sbjct: 241 CSKRGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDQDIKLD 300
Query: 301 LTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
LTAYTV+ISGF RVGR K+MEAAE V K GLLPDRIILTAIMDVHFKAGN+KEALNAY+
Sbjct: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKKGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360
Query: 361 ILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEA 420
ILLA+GFE D TLS L+DGL K+GYLQ+ARRY VKEKANEILYTV IDALCKEGNLDEA
Sbjct: 361 ILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDALCKEGNLDEA 420
Query: 421 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 480
E+ IKEM EAGFVPDK+VYTS IAELCKQGNLLKAF VKKRMVQE+IEPDLLTYSSLI G
Sbjct: 421 EKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPDLLTYSSLISG 480
Query: 481 LAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDL 528
LAEKGLMIEAKQVFDDMLN GITPD VAYDILIRGYHNQGN AIS L
Sbjct: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVAYDILIRGYHNQGNGAAISGL 528
BLAST of Cp4.1LG01g06140 vs. NCBI nr
Match:
gi|778698039|ref|XP_011654466.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X2 [Cucumis sativus])
HSP 1 Score: 802.4 bits (2071), Expect = 5.1e-229
Identity = 403/528 (76.33%), Postives = 444/528 (84.09%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
MVKEALQ+LAHLRR FP+PFTCNKL+HSL ++ G H S+
Sbjct: 1 MVKEALQYLAHLRRTFRFPTPFTCNKLLHSL----------------INSG-CGHLSA-- 60
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
++ F G FGCSPDIVSYNSLL GYC+SY+I++ACFLVNRVRG
Sbjct: 61 KLLFHFLSKG--------------FGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
Query: 121 VLN-PDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVG 180
LN PDLVMFNILFNGFAK YMKNEAFMY GLMWK CLP++VTYGT VDMFCKMGDM++G
Sbjct: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
Query: 181 NKMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDG 240
N+MF DMMKVG+VPNLV FSSLIDGYCKAGSLDVAF Y ERM++CSV+PNEFTYSTLIDG
Sbjct: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240
Query: 241 CCKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLD 300
C K GML RAD LFE+MLS ILPNCTV+TSIIDGHFKKGNVD+A+KYIN+MFDR+I LD
Sbjct: 241 CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD 300
Query: 301 LTAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYR 360
LTAYTV+ISGF RVGR K+MEAAE V KNGLLPDRIILTAIMDVHFKAGN+KEALNAY+
Sbjct: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360
Query: 361 ILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEA 420
ILLA+GFE D VTLS L+DGL K+GYLQEARRY+VKE ANEILYTV IDALCKEGNLD+A
Sbjct: 361 ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA 420
Query: 421 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 480
E+ IKEM EAGFVPDK+VYTSWIAELCKQGNLLKAF VKKRMVQE++EPDLLTYSSLIGG
Sbjct: 421 EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG 480
Query: 481 LAEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDL 528
LAEKGLMIEAKQVFDDMLN GITPD V+YDILIRGYHNQGN AIS L
Sbjct: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGL 495
BLAST of Cp4.1LG01g06140 vs. NCBI nr
Match:
gi|1009154833|ref|XP_015895385.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 [Ziziphus jujuba])
HSP 1 Score: 715.7 bits (1846), Expect = 6.2e-203
Identity = 338/527 (64.14%), Postives = 413/527 (78.37%), Query Frame = 1
Query: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
MV E LQF A LRR S FPSPFT NKL+HSL++S CGELS K L FLSKGY PH SSFN
Sbjct: 1 MVSETLQFFAQLRRASKFPSPFTFNKLLHSLVDSNCGELSLKFLSFFLSKGYVPHPSSFN 60
Query: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
S++SF CKLGN +AE++++SMP FGC PD V+YNSL+ GYC ++ I C ++ ++R G
Sbjct: 61 SVLSFLCKLGNFCFAEKVVDSMPGFGCVPDAVTYNSLIDGYCKNFDIERGCLVLKKIRVG 120
Query: 121 VLNPDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGN 180
NPD+V FNIL NGF+K MK EAF+Y+GLMWK CLPNVVTY T +DMFCKMGD+++G
Sbjct: 121 HCNPDVVTFNILLNGFSKLKMKKEAFVYMGLMWKCCLPNVVTYSTFIDMFCKMGDLDMGY 180
Query: 181 KMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDGC 240
K+F DMMK GV PNL+AF+SLIDGYCKAG++++AF E+M+Q S+ PN TY+ LIDG
Sbjct: 181 KVFSDMMKNGVFPNLIAFTSLIDGYCKAGNVEMAFELFEKMKQSSLSPNVVTYTALIDGL 240
Query: 241 CKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLDL 300
CK GMLE A+ LF +ML G+ PN V+TS+IDG+F KGNVDNA+KY+ +M ++ I DL
Sbjct: 241 CKHGMLEGAESLFSKMLEDGVEPNSAVYTSMIDGNFVKGNVDNAIKYVIKMREQNIRFDL 300
Query: 301 TAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRI 360
T + V+I GF + GRL KAME VV +GL PD+IILT IMD HFK+ NLK ALN YR
Sbjct: 301 TTFGVIIWGFCKTGRLDKAMEVMGIVVASGLAPDKIILTTIMDAHFKSRNLKAALNLYRE 360
Query: 361 LLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAE 420
LL RGFEPD +TLSTL++GLCK+G+LQEARRY +EKAN+I YTVLID +CKEG +E E
Sbjct: 361 LLVRGFEPDVITLSTLLNGLCKHGHLQEARRYFCREKANQISYTVLIDGICKEGQFNEVE 420
Query: 421 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 480
+KEM E GFVPDKYVYTSWIA LCKQGNL++AF +K +MV+E +EPDLLTYSSLI GL
Sbjct: 421 MVLKEMSEVGFVPDKYVYTSWIAGLCKQGNLVEAFRLKNKMVKEGVEPDLLTYSSLISGL 480
Query: 481 AEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDL 528
A KGLMIEAKQVFD+ML GITPDS YDIL+RGY +G+ A+ L
Sbjct: 481 ASKGLMIEAKQVFDNMLKMGITPDSAVYDILVRGYLKEGDEAAVLGL 527
BLAST of Cp4.1LG01g06140 vs. NCBI nr
Match:
gi|645229218|ref|XP_008221361.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 [Prunus mume])
HSP 1 Score: 701.4 bits (1809), Expect = 1.2e-198
Identity = 337/522 (64.56%), Postives = 409/522 (78.35%), Query Frame = 1
Query: 6 LQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFNSIISF 65
L+F A LRR S FP+PFTCNKL+HSLI+S CGELS K+L H LSKGY PH SSFNS+ISF
Sbjct: 283 LKFFALLRRTSQFPTPFTCNKLLHSLISSNCGELSVKILCHLLSKGYNPHPSSFNSVISF 342
Query: 66 FCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGGVLNPD 125
FCKLG+I +A +++SMPR+GC PDIV+YNSL+ GYC I EAC ++ ++R G PD
Sbjct: 343 FCKLGHISFARTLVDSMPRYGCLPDIVTYNSLIDGYCKFCDIDEACLMMRKIRIGGCRPD 402
Query: 126 LVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGNKMFFD 185
L FN+LFNGF K MK EAF+Y+GLMWKSC PNVVTY T +DMFCK GD+ +G ++ D
Sbjct: 403 LGTFNVLFNGFCKVKMKKEAFVYMGLMWKSCSPNVVTYSTFIDMFCKTGDLGLGYRVLGD 462
Query: 186 MMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDGCCKQGM 245
M+K GV+PNLVAF+SLIDGYCKAG+L+VAF LE+M+Q S+ PN TY+ LI G C QGM
Sbjct: 463 MVKDGVLPNLVAFTSLIDGYCKAGNLEVAFELLEKMRQSSLLPNVVTYNALIKGLCMQGM 522
Query: 246 LERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLDLTAYTV 305
ERAD+LF +M G+ PN V+TSIIDGH +KGNVD+A+KY++RM D+ LD+ AY V
Sbjct: 523 SERADYLFSKMWEDGVEPNSAVYTSIIDGHLQKGNVDDAMKYMSRMHDQGFNLDVAAYGV 582
Query: 306 VISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRILLARG 365
VISG + RL KA+ E++V +GL+PD+++L IMD +FKAGNLK AL YR LL RG
Sbjct: 583 VISGLCKNSRLDKAILFIEDMVSSGLVPDQMLLATIMDAYFKAGNLKAALGVYRELLERG 642
Query: 366 FEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAERTIKE 425
FEPD VTLS L+DGLCK+G L+EAR Y KEKANEI Y+VLI+ +CKEGNL E E+ +E
Sbjct: 643 FEPDGVTLSALMDGLCKHGCLKEARGYFCKEKANEISYSVLINGMCKEGNLSEVEKVFRE 702
Query: 426 MCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGLAEKGL 485
M EAGF+PDKYVYTSWIA LCKQG+L +AF +K +MV+E I PDLLTYSSLI GLA GL
Sbjct: 703 MSEAGFIPDKYVYTSWIAGLCKQGSLSEAFRLKNKMVKEGIIPDLLTYSSLIFGLANAGL 762
Query: 486 MIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISDL 528
MIEAKQVFDDML GITPDS +DILIRGYH +GN AIS L
Sbjct: 763 MIEAKQVFDDMLKKGITPDSAVFDILIRGYHKEGNDAAISSL 804
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP141_ARATH | 7.4e-172 | 53.57 | Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana GN... | [more] |
| PP143_ARATH | 2.3e-80 | 31.39 | Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... | [more] |
| PP445_ARATH | 1.1e-69 | 29.56 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN... | [more] |
| PP407_ARATH | 1.1e-66 | 29.87 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... | [more] |
| PP432_ARATH | 2.5e-66 | 28.54 | Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KPG7_CUCSA | 9.4e-198 | 84.25 | Uncharacterized protein OS=Cucumis sativus GN=Csa_5G021290 PE=4 SV=1 | [more] |
| W9R0T6_9ROSA | 1.6e-197 | 61.48 | Uncharacterized protein OS=Morus notabilis GN=L484_005539 PE=4 SV=1 | [more] |
| A0A061EFM6_THECC | 1.7e-175 | 57.74 | Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1 OS=T... | [more] |
| A0A0D2Q7W0_GOSRA | 2.1e-173 | 56.41 | Uncharacterized protein OS=Gossypium raimondii GN=B456_002G171900 PE=4 SV=1 | [more] |
| V4KT02_EUTSA | 1.4e-172 | 55.08 | Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10003932mg PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G01740.1 | 4.2e-173 | 53.57 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G02150.1 | 1.3e-81 | 31.39 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G65560.1 | 6.0e-71 | 29.56 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G39710.1 | 6.2e-68 | 29.87 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G55840.1 | 1.4e-67 | 28.54 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
