CmaCh03G010730 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTAGGAATTGTCGGAATCCCAAGTTGCCGAAATCCCTGTTCCTCTCTCTCTCTATAAATCATTACCCCCATTTTCTCTCTCATACACTTTCATTCACCCACAGACACAGACAAGGATGGGAGCTTGTGCGACGAAGCCAAAGGTTCTCAAGGCTGACTCCGGCGAGGCTCCGGCTCCGGCACCGGCGCCAGAGCTTTCTCCGGAGAAGACGGTGGCCGAAACTAAACTGGAGAATGGCAGCAGCGGCGCCCAGGGCACGGAGATCGTCGATGAAGACAAGGTGGGTTCTAAGCCTCGTTGTCTCAGCCATTTGTTCAGTGATCAGGTAATTTATTTTTTTTTATTTATTTGAACAATTTTTTTAATCTGTTTCGATCCTGAAAAAAAAAAAAGAAAAAGAATCTTGATGAACATGAGTAATAATGCAATGGTGGTTGTCTTTTTGCTTTCATTTCCCAATTTTCTTTTCTCTGTCAGCCCCTGTTTTTATCTTTTATTTTTTTCCCTTTTAATGTCTAATAAATTTATTAATTTAAAAAATGGATGTAATTTATTAATGAAAAGGAGAAGACAGCAGCAGCGGATCCATCGGAGAAAGAAGAGATCCCACTGGAAACTGAGAAGAAAATGAACCCACCGCCGGAGGAGAAGCCGTCTGAAACTATCCCACCGGAAACAGAGAAGAAAATAAACCCACCGACGGAGGAGAAGCCGTTTGAGACCAACCCACCTGAGCCGGAGCCACCAGTTTCCGATTCTGTTACAGAAAATGCTGAACCAATTGAAAGCAATACCAAAGTCGAAGTTTCCGATGAGAACGAGCCTCCGCCTGAGAAGACAGAGTCGCCGGAGAAACCCACTGAAACAGAGGAACCAGTGATCAAAGTAATCAGCAATTAAGAAAAGCTTCGTGTGTCACTTTTTTTCTTCCTTTTTTTTGAGATAAACTGAGTAATAATAAATCAGTCTTCTGAGAATTATTGAATCTGAAGCCCATCAGCCCAGTTAGAATTCCGGCCCAATTTCGTCATCGGCCCAATTTCTCACCCAGCGTCTTCTAGCCCACTCGCGCATCCTCGGCCCAACTATAAAGCCCATAGTCGCAGCCCGCTCCATGATCCCCAATAGGTGGCCCATCAGCCCACGACTCAGTGACTCGCGACTTAACCCGTGGTCGACCTGACAGCCGACCCGAAGCCGTATTCTCGTGTGCGGCGCGCGTGCGGCTCAGACCCCTGCAGCCG TCTTAGGAATTGTCGGAATCCCAAGTTGCCGAAATCCCTGTTCCTCTCTCTCTCTATAAATCATTACCCCCATTTTCTCTCTCATACACTTTCATTCACCCACAGACACAGACAAGGATGGGAGCTTGTGCGACGAAGCCAAAGGTTCTCAAGGCTGACTCCGGCGAGGCTCCGGCTCCGGCACCGGCGCCAGAGCTTTCTCCGGAGAAGACGGTGGCCGAAACTAAACTGGAGAATGGCAGCAGCGGCGCCCAGGGCACGGAGATCGTCGATGAAGACAAGGTGGGTTCTAAGCCTCGTTGTCTCAGCCATTTGTTCAGTGATCAGGAGAAGACAGCAGCAGCGGATCCATCGGAGAAAGAAGAGATCCCACTGGAAACTGAGAAGAAAATGAACCCACCGCCGGAGGAGAAGCCGTCTGAAACTATCCCACCGGAAACAGAGAAGAAAATAAACCCACCGACGGAGGAGAAGCCGTTTGAGACCAACCCACCTGAGCCGGAGCCACCAGTTTCCGATTCTGTTACAGAAAATGCTGAACCAATTGAAAGCAATACCAAAGTCGAAGTTTCCGATGAGAACGAGCCTCCGCCTGAGAAGACAGAGTCGCCGGAGAAACCCACTGAAACAGAGGAACCAGTGATCAAAGTAATCAGCAATTAAGAAAAGCTTCGTGTGTCACTTTTTTTCTTCCTTTTTTTTGAGATAAACTGAGTAATAATAAATCAGTCTTCTGAGAATTATTGAATCTGAAGCCCATCAGCCCAGTTAGAATTCCGGCCCAATTTCGTCATCGGCCCAATTTCTCACCCAGCGTCTTCTAGCCCACTCGCGCATCCTCGGCCCAACTATAAAGCCCATAGTCGCAGCCCGCTCCATGATCCCCAATAGGTGGCCCATCAGCCCACGACTCAGTGACTCGCGACTTAACCCGTGGTCGACCTGACAGCCGACCCGAAGCCGTATTCTCGTGTGCGGCGCGCGTGCGGCTCAGACCCCTGCAGCCG ATGGGAGCTTGTGCGACGAAGCCAAAGGTTCTCAAGGCTGACTCCGGCGAGGCTCCGGCTCCGGCACCGGCGCCAGAGCTTTCTCCGGAGAAGACGGTGGCCGAAACTAAACTGGAGAATGGCAGCAGCGGCGCCCAGGGCACGGAGATCGTCGATGAAGACAAGGTGGGTTCTAAGCCTCGTTGTCTCAGCCATTTGTTCAGTGATCAGGAGAAGACAGCAGCAGCGGATCCATCGGAGAAAGAAGAGATCCCACTGGAAACTGAGAAGAAAATGAACCCACCGCCGGAGGAGAAGCCGTCTGAAACTATCCCACCGGAAACAGAGAAGAAAATAAACCCACCGACGGAGGAGAAGCCGTTTGAGACCAACCCACCTGAGCCGGAGCCACCAGTTTCCGATTCTGTTACAGAAAATGCTGAACCAATTGAAAGCAATACCAAAGTCGAAGTTTCCGATGAGAACGAGCCTCCGCCTGAGAAGACAGAGTCGCCGGAGAAACCCACTGAAACAGAGGAACCAGTGATCAAAGTAATCAGCAATTAA MGACATKPKVLKADSGEAPAPAPAPELSPEKTVAETKLENGSSGAQGTEIVDEDKVGSKPRCLSHLFSDQEKTAAADPSEKEEIPLETEKKMNPPPEEKPSETIPPETEKKINPPTEEKPFETNPPEPEPPVSDSVTENAEPIESNTKVEVSDENEPPPEKTESPEKPTETEEPVIKVISN
BLAST of CmaCh03G010730 vs. TrEMBL
Match: A0A0A0KFS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G485140 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.2e-21 Identity = 93/185 (50.27%), Postives = 105/185 (56.76%), Query Frame = 1
BLAST of CmaCh03G010730 vs. NCBI nr
Match: gi|659080828|ref|XP_008441002.1| (PREDICTED: neurofilament heavy polypeptide isoform X1 [Cucumis melo]) HSP 1 Score: 112.1 bits (279), Expect = 1.0e-21 Identity = 97/206 (47.09%), Postives = 112/206 (54.37%), Query Frame = 1
BLAST of CmaCh03G010730 vs. NCBI nr
Match: gi|700193184|gb|KGN48388.1| (hypothetical protein Csa_6G485140 [Cucumis sativus]) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21 Identity = 93/185 (50.27%), Postives = 105/185 (56.76%), Query Frame = 1
BLAST of CmaCh03G010730 vs. NCBI nr
Match: gi|449461819|ref|XP_004148639.1| (PREDICTED: neurofilament medium polypeptide-like [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 4.5e-17 Identity = 87/181 (48.07%), Postives = 100/181 (55.25%), Query Frame = 1
BLAST of CmaCh03G010730 vs. NCBI nr
Match: gi|659080832|ref|XP_008441004.1| (PREDICTED: neurofilament heavy polypeptide isoform X3 [Cucumis melo]) HSP 1 Score: 95.5 bits (236), Expect = 1.0e-16 Identity = 89/190 (46.84%), Postives = 104/190 (54.74%), Query Frame = 1
BLAST of CmaCh03G010730 vs. NCBI nr
Match: gi|659080830|ref|XP_008441003.1| (PREDICTED: neurofilament medium polypeptide isoform X2 [Cucumis melo]) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15 Identity = 89/201 (44.28%), Postives = 104/201 (51.74%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |