Cucsa.101220 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.101220
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold00927 : 466562 .. 469976 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTAATGTTGTTGAGTATTTGTTTtGTTTTtATTAATAACTTTTTTTTTtAAATTGCAATTTCGTTGTTTGTGACCAATTGTCCCAATCCCAAATTGCCGAAAATCCCTCTTTATAAATTATTAAACCCATCTTCTCTCTGTTTCTCACTTTCGTTCATTCATTCATTCATTCATTCACACACACACACACACAACAGCAACAGCAAAAGAAAAGATGGGAGCTTGTGCCACAAAGCCAAAGGATCTGAAGGCGGAGTCCGGCGACGCTCCGGAGGAGTTGCCGGCCGAAACTAAACCGGATCATGTCGGTGATGAAAAGGCGAAGGAGATCGTCGTTGATGATGACAAGGTGGATTCTAAGCCTCCTTCTCTTACTGATTTGTTCATTCATCAGGTTGTTTTTTTTAAATAAaAAAAaTaCTCAATTAATTTAAAATTTTGTTTATTTTTCTTCTTAAAAAAaTaTTTAAATGGGTATTTCAAAATTTTTTtGAAAAAATTAATGTGGGTGTGATTTAATTATTTGAAGATGTGTGTTTGGATGATGAGAAAATTTGAGGAAAATAAAAaTAAAGAAATGTAGATGAATATATTATTGAAAATGTGTAGTGGGTTGTCTTTTTCCTTTCATTtGGTTtGTTTTTTttCTTTTAAATTATTTTGTTGGACATTTCtGTAGAACAaTTAGACACCAAATTttACTCTCTCTCTCTCTCTCTCTCTGGGGTAAAAGCTGATTAATCATTGACAATAATAGAAAAaGTTGAATTATAAATTTAGTTTTCTTTTTAATTGTGTGTTTATACTCAGTTAACTTTAAAATTAGGATCTGATTGGTTGGGCTTTCTTAGACCCAGAATTTAATTTTTtATACTTAGGCTTGTTACTTTTAACAAGTTTGAACCATCGTTTACATACCTATTAAACATAAAATTCAGAAGAAAAAAAAaTCAATTTATACTTCTTTTTAAAAAAaTTTAAGTATTGTATGAATTAATACAATCAAATTTTATAATTATATCAATTAAACTCATAAGTATAGATTTATAATTGTATCTTAAAATTATATGTAAAGAGATTATTTTATTTGTACATATGTTTGAAGAAGAGACTTGTTTATGAGAGATTTGATAGAAAAAGTAATTGACTTATACCATGTCCATGTTTATCCAAACGTATATAATCTAATGAAGAGTAAACTAAATTATCAAAAGTGTACAGCTTATAACTTTTATGGATACAATTTGAAAAATGAACACAAAGTAAAAaGAACCAAAAACAAAAaCATAAAAaCAAATGTAAAATGGATTACCAAAAACAAACATAACTCAATACACCTACAATTTATAGTATCGACGTTTGAAGGTTAAGAGGTAAAaGTAAATTGTGAAGAAAAGGTTAAAAGAAaGGGGTGTGGAATGGGTTTGGAGTGTTATGAGCAGGAGCAGTGGCAGTAGATGGGGTTGTGGTGGAAGGGCAAAAaGAAAAAaGAAAAAAaGAGAGAGAGAGAGAGATTCCATAATTTTGTTTTGTTTTCGATTGTTGCTTTCTATAATTTGGTTTCCTGGTTGTCACCTAATTAAATAAATGCTGGCCTCCTGTTTTtCTTTTtCATCAAACTCCTTTGTCTATTGGGATCTAAATTACATACAGAAAAGCTGCCTTTTACTTTTAGTACATAGTTTTTTTTATTTAGTTTCATGGATTTGGTCCTTCGTATTGATGTTTATTATTAAATTTAAGTTAAATTCTAAACACTTTCATTCAATTTTCATCACTAGTAAATTATATTTTAATTTTTtATTCATAATTATTTTTTTtAAAAAAAAaTTAACACCAAGGACAAAAGTGAGTTTGGACTCAGTAGCCCAATAGCCTTCACTGTTGTTTGGACTCAAGTTGGGCCAGCCCAACATATTCTCTTCCTCACTCTTTAAACTTTGGATAGCTGCAAATTTAACCAAAATAATATTTTAAATTCCGTCGATAGAAGTCTATCATCAATGGTCAATGATTACCCTAAAACTTTTGTTATAGATGAGATATAATTGTAAATATAGTCATTAAATTAAAAaTAATTAAGTATATAACAATATTTAAAAAAAaTTATAAATACAACAAAATTTATTAAAGTTTATCATTAATAGATTATGTTGCAAATATTTATTAATAGGCTATAAGAGTCTTTCAACGTAAAAGTCTATCACAAATAAATTTTGCTAAATTTTTAAATTTTAAAAATGTTGTTATATGATTAATTATTATTATTATAATTACCCATTACAAATCGATTAATTTGGTTGTTTGATTTGTTGCGTGGAATATTGAAGATCATGAATGAAGATTATATCAATTAAAATAATTTATATAATAAGTTTTTTtATTGATGTGAACTATGAAATTCAATCTACGAACGATATTGAAATGTGTCTTTTAGTCTCTATCTAATTTTAACAAGTCGTTGCTAGATCAATTTTAAAATTCAAAAGTAAAAAATTTGTAAAAAGTTCACAAATCATTTCCCAGTAGTTATCAAAACTAATATTTCAAACAAAAAAAaTAAATACTCTATAAACATAAATAGTAAATAACTAAAAAAAAaCCATAAGGATGGTTGATTTTTAAAATGATTTTGAAGTTTGAAAAATGCTTTTAGATAGTTTCTCAGTTAATTTTACCATTAGTGATTCAATTGGCATAAACTTATATCCCAGAACTCATGGATGATAGAAATAGTAGTTATAGTATACAATGTCGTCTTTATTTTtATTTTTtCTTTTCACAAGATAATATACATTCTAATTATTTGAATAATATTTGAATTTAAGAAGTTGGATGTCGTTAATGTGAATTCATGCAGAAGGAAGGTAATAAGGAGAAGACTGAAGATGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAAACCCACTACCGGAGGAGAAGCCGTCTGAAAACAACCCACCGGAGCCAGTAGTTTCGGACTCTGTTACAGAAAACAAAACTGTAACAGAAATGGAAACCCCAGATGAGGCAATCAAAGTGGAAGTTACCATTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCAGCGGAGAAACCAACTGAAACAGAGAAGGAAGTGAAGGTAACTAATTAGCAATTGATCAATAAATTATTTTCGAAACGAAAATCCCTTCATTAGTTAATTACCAACTGAGGAACCATTATCCAAAAATTGTTTCATTTTCGTCTTCTTTTTTCCTTTTAGTTGTTATGACTTATGGGGAAAAATGCATACCTTCATCTTTACTTCTCTCTTAACTACTTTTTGTTCTTCTTTATGTTTCTGTCTCTGCTTTCATAGCCCAAATATTACTTATAAAGATATATATATTATATATAGATATATAATT

mRNA sequence

ATGTAATGTTGTTGAGTATTTGTTTTGtttttattaataacttttttttttaaattGCAATTTCGTTGTTTGTGACCAATTGTCCCAATCCCAAATTGCCGAAAATCCCTCTTTATAAATTATTAAACCCATCTTCTCTCTGTTTCTCACTttcgttcattcattcattcattcattcaCACACACACACACACAACAGCAACAGCAAAAGAAAAGATGGGAGCTTGTGCCACAAAGCCAAAGGATCTGAAGGCGGAGTCCGGCGACGCTCCGGAGGAGTTGCCGGCCGAAACTAAACCGGATCATGTCGGTGATGAAAAGGCGAAGGAGATCGTCGTTGATGATGACAAGAAGGAAGGTAATAAGGAGAAGACTGAAGATGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAAACCCACTACCGGAGGAGAAGCCGTCTGAAAACAACCCACCGGAGCCAGTAGTTTCGGACTCTGTTACAGAAAACAAAACTGTAACAGAAATGGAAACCCCAGATGAGGCAATCAAAGTGGAAGTTACCATTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCAGCGGAGAAACCAACTGAAACAGAGAAGGAAGTGAAGGTAACTAATTAGCAATTGATCAATAAATTATTTTCGAAACGAAAATCCCTTCATTAGTTAATTACCAACTGAGGAACCATTATCCAAAAATTGTTTCATTTTCGTCTTCTTTTTTCCTTTTAGTTGTTATGACTTATGGGGAAAAATGCATACCTTCATCTTTACTTCTCTCTTAACTACTTTTTGTTCTTCTTTATGTTTCTGTCTCTGCTTTCATAGCCCaaatattacttataaagatatatatattatatatagatatataatt

Coding sequence (CDS)

ATGGGAGCTTGTGCCACAAAGCCAAAGGATCTGAAGGCGGAGTCCGGCGACGCTCCGGAGGAGTTGCCGGCCGAAACTAAACCGGATCATGTCGGTGATGAAAAGGCGAAGGAGATCGTCGTTGATGATGACAAGAAGGAAGGTAATAAGGAGAAGACTGAAGATGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAAACCCACTACCGGAGGAGAAGCCGTCTGAAAACAACCCACCGGAGCCAGTAGTTTCGGACTCTGTTACAGAAAACAAAACTGTAACAGAAATGGAAACCCCAGATGAGGCAATCAAAGTGGAAGTTACCATTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCAGCGGAGAAACCAACTGAAACAGAGAAGGAAGTGAAGGTAACTAATTAG

Protein sequence

MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN*
Homology
[Close]
BLAST of Cucsa.101220 vs. TrEMBL
Match: A0A0A0KFS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G485140 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 1.9e-73
Identity = 143/158 (90.51%), Postives = 143/158 (90.51%), Query Frame = 1 

Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK--------------- 60
           MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK               
Sbjct: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPPSLTDLFIHQ 60

Query: 61  KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEME 120
           KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEME
Sbjct: 61  KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEME 120

Query: 121 TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 144
           TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
Sbjct: 121 TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 158

[Close]
BLAST of Cucsa.101220 vs. TrEMBL
Match: A0A151ZAW3_9MYCE (Alpha/beta hydrolase fold-1 domain-containing protein OS=Dictyostelium lacteum GN=DLAC_07978 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-07
Identity = 47/145 (32.41%), Postives = 70/145 (48.28%), Query Frame = 1 

Query: 7   KPKDLKAESGDAPEELPAET-----KP-DHVGDEKAKEIVVDDDKK-EGNKEKTEDADPP 66
           KP +   E     EE P ET     KP + V ++K  E VV++ K  E   E+ +  +  
Sbjct: 554 KPVETVEEQKPVEEEKPVETVVEEVKPVETVEEQKPVETVVEEIKPVETVVEEVKPVETV 613

Query: 67  EKQ----ETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEV 126
           E+Q    E  P ET +++ P+ EEKP E    E    ++V E+    E E P E ++ + 
Sbjct: 614 EEQKPVEEEKPVETVEEVKPIEEEKPVETVVEEQKPVETVIEDVKPVEEEKPVETVEEQK 673

Query: 127 TIENDVPPEKTESAEKPTETEKEVK 141
            IE + P E     +KP E EK V+
Sbjct: 674 PIEEEKPVETVVEEQKPVEEEKPVE 698

[Close]
BLAST of Cucsa.101220 vs. TrEMBL
Match: A0A151ZAW3_9MYCE (Alpha/beta hydrolase fold-1 domain-containing protein OS=Dictyostelium lacteum GN=DLAC_07978 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-06
Identity = 46/153 (30.07%), Postives = 65/153 (42.48%), Query Frame = 1 

Query: 7   KPKDLKAESGDAPEELPAETKPDH---VGDEKAKEIVVDDDKKEGNKEKTEDADPPEK-- 66
           KP +   E     EE P ET  +    V +EK  E VV++ K    ++  E+  P E   
Sbjct: 664 KPVETVEEQKPIEEEKPVETVVEEQKPVEEEKPVETVVEESKPVEEEKPIEEEKPVETVV 723

Query: 67  ----------------QETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEME 126
                           +E  P ET ++  P+ EEKP E + P   V ++        E E
Sbjct: 724 EESKPVEESKPVETVVEEVKPVETTEESKPVEEEKPVEESKPVETVEET-------NEEE 783

Query: 127 TPDEAIKVEVTIENDVPPEKTESAEKPTETEKE 139
           T +E  K E T E +   E+T+  EK TET  E
Sbjct: 784 TKEEETKEEETKEEETKEEETKEEEKSTETTTE 809


HSP 2 Score: 58.9 bits (141), Expect = 5.8e-06
Identity = 48/135 (35.56%), Postives = 64/135 (47.41%), Query Frame = 1 

Query: 7   KPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEK-QETN 66
           KP +   E     E  P ET    V ++K  E VV+D K     E  E+  P E  +E  
Sbjct: 502 KPVETVEEQKPVEEAKPIET----VEEQKPVETVVEDVKPI---ETVEEQKPVETVEEVK 561

Query: 67  PPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEK 126
           P ET ++  P+ EEKP E    E    ++V E K V   ET  E IK   T+  +V P +
Sbjct: 562 PVETVEEQKPVEEEKPVETVVEEVKPVETVEEQKPV---ETVVEEIKPVETVVEEVKPVE 621

Query: 127 TESAEKPTETEKEVK 141
           T   +KP E EK V+
Sbjct: 622 TVEEQKPVEEEKPVE 626


HSP 3 Score: 55.5 bits (132), Expect = 6.4e-05
Identity = 47/145 (32.41%), Postives = 65/145 (44.83%), Query Frame = 1 

Query: 7   KPKDLKAESGDAPEELPAETKPD--HVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQET 66
           KP +   E     EE P ET  +   + +EK  E VV++ K    +   ED  P E  E 
Sbjct: 608 KPVETVEEQKPVEEEKPVETVEEVKPIEEEKPVETVVEEQKPV--ETVIEDVKPVE--EE 667

Query: 67  NPPETEKQINPLPEEKP-----SENNP--PEPVVSDSVTENKTVTEMETPDEAIKVEVTI 126
            P ET ++  P+ EEKP      E  P   E  V   V E+K V E +  +E   VE  +
Sbjct: 668 KPVETVEEQKPIEEEKPVETVVEEQKPVEEEKPVETVVEESKPVEEEKPIEEEKPVETVV 727

Query: 127 ENDVPPEKTESAEKPTETEKEVKVT 143
           E   P E+++  E   E  K V+ T
Sbjct: 728 EESKPVEESKPVETVVEEVKPVETT 748


HSP 4 Score: 50.8 bits (120), Expect = 1.6e-03
Identity = 40/118 (33.90%), Postives = 55/118 (46.61%), Query Frame = 1 

Query: 25  ETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEK--QETNPPETEKQINPLPEEKPS 84
           E KP  V +EK  E VV++ K     +  E+  P E   +E  P E EK +  + E+KP 
Sbjct: 456 EVKP--VEEEKPVETVVEEVKPVEEVKPIEEVKPVETVVEEVKPVEEEKPVETVEEQKPV 515

Query: 85  ENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVK 141
           E   P                +ET +E   VE T+  DV P +T   +KP ET +EVK
Sbjct: 516 EEAKP----------------IETVEEQKPVE-TVVEDVKPIETVEEQKPVETVEEVK 554


HSP 5 Score: 62.0 bits (149), Expect = 6.8e-07
Identity = 49/147 (33.33%), Postives = 68/147 (46.26%), Query Frame = 1 

Query: 5   ATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQET 64
           ATK    K+   ++ EE P  TK +HV  EK+ ++       E  ++ T   D P K ET
Sbjct: 528 ATKTLASKSVRKESKEETPEVTKANHV--EKSPKV-------ESKEKVTVKKDKPVKTET 587

Query: 65  NPPETEKQINPLPEEKPSENNPPEPVVSD---SVTENKTV--------TEMETPDEAIKV 124
            PP TEK++    E+ P +    E   +D    VT+ KTV         E +   +  K 
Sbjct: 588 KPPVTEKEVPSKEEQPPVKAEVAEKQATDVKPKVTKEKTVKKETKAKPEEKKEEKDKTKK 647

Query: 125 EVTIENDVPPEKTESAEKPTETEKEVK 141
           EV  + D  P K E   K  ET+KEVK
Sbjct: 648 EVAKKEDKTPIKKEEKPKKEETKKEVK 665

[Close]
BLAST of Cucsa.101220 vs. TrEMBL
Match: F6XQD6_CANLF (Uncharacterized protein OS=Canis lupus familiaris GN=MAP1B PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-06
Identity = 50/149 (33.56%), Postives = 64/149 (42.95%), Query Frame = 1 

Query: 5   ATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQET 64
           A KP   K+   ++ EE P  TK +HV  EK  ++       E  ++ T   D P K ET
Sbjct: 654 AAKPLPSKSVRKESKEETPEVTKANHV--EKPPKV-------ESKEKVTVKKDKPVKTET 713

Query: 65  NPPETEKQI-----NPLPEEKPSENNPPEPVVSDSVTENKTV--------TEMETPDEAI 124
            PP TEK++       LP  K      P   V   VT+ KTV         E +   E  
Sbjct: 714 KPPVTEKEVPSKEKEELPPVKAEVAEKPTTDVKPKVTKEKTVKKETKAKSEEKKEEKEKP 773

Query: 125 KVEVTIENDVPPEKTESAEKPTETEKEVK 141
           K EV  + D  P K E   K  E +KEVK
Sbjct: 774 KKEVAKKEDKTPIKKEEKPKKEEVKKEVK 793

[Close]
BLAST of Cucsa.101220 vs. TrEMBL
Match: L8Y8V6_TUPCH (Microtubule-associated protein 1B (Fragment) OS=Tupaia chinensis GN=TREES_T100008232 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-06
Identity = 49/147 (33.33%), Postives = 65/147 (44.22%), Query Frame = 1 

Query: 5   ATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQET 64
           ATKP   K    ++ EE    TK +HV  EK  ++       E  ++ T   D P K ET
Sbjct: 545 ATKPLSSKTVRKESKEETTDVTKTNHV--EKPPKV-------ESKEKVTVKKDKPVKTET 604

Query: 65  NPPETEKQINPLPEEKPSENNPPEPVVSD---SVTENKTV--------TEMETPDEAIKV 124
            PP TEK++    E+ P +    E   +D    VT+ KTV         E +   E  K 
Sbjct: 605 KPPVTEKEVTSKEEQPPIKAEVAEKQATDVKPKVTKEKTVKKEIKAKSEEKKEEKEKPKK 664

Query: 125 EVTIENDVPPEKTESAEKPTETEKEVK 141
           EV  + D  P K E   K  E +KEVK
Sbjct: 665 EVAKKEDKTPIKKEEKPKKEEVKKEVK 682

[Close]
BLAST of Cucsa.101220 vs. TAIR10
Match: AT5G55660.1 (AT5G55660.1 DEK domain-containing chromatin associated protein)

HSP 1 Score: 57.8 bits (138), Expect = 6.5e-09
Identity = 47/126 (37.30%), Postives = 66/126 (52.38%), Query Frame = 1 

Query: 14  ESGDAPEELPAETKPDHVGDEKAKEIVVD-DDKKEGNKEKTEDADPPEKQETNPPETEKQ 73
           E GD  E+L    K D V DE  K   VD DDK+E  KEK E A+  E++ETN  E  K+
Sbjct: 160 EEGDTEEKLVGGDKGDDV-DEAEKVENVDEDDKEEALKEKNE-AELAEEEETNKGEEVKE 219

Query: 74  INPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKP 133
            N   ++  ++    EP V D  TE+K   E +  ++  + E +++ D   EK ES +  
Sbjct: 220 ANK-EDDVEADTKVAEPEVEDKKTESKDENEDKEEEKEDEKEESMD-DKEDEKEESNDDD 279

Query: 134 TETEKE 139
            E EKE
Sbjct: 280 KEDEKE 281


HSP 2 Score: 35.8 bits (81), Expect = 2.7e-02
Identity = 31/123 (25.20%), Postives = 56/123 (45.53%), Query Frame = 1 

Query: 9   KDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPE 68
           +D K ES D  E+     K +   DEK + +   DDK++  +E  +D    EK+E+N  +
Sbjct: 236 EDKKTESKDENED-----KEEEKEDEKEESM---DDKEDEKEESNDDDKEDEKEESNDDK 295

Query: 69  TEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTES 128
            +K+ +     K  +    +       T  KT ++ E  D  I+ +    +D P  + +S
Sbjct: 296 EDKKEDIKKSNKRGKGKTEK-------TRGKTKSDEEKKD--IEPKTPFFSDRPVRERKS 341

Query: 129 AEK 132
            E+
Sbjct: 356 VER 341


HSP 3 Score: 34.7 bits (78), Expect = 5.9e-02
Identity = 34/133 (25.56%), Postives = 63/133 (47.37%), Query Frame = 1 

Query: 5   ATKPKDLKAESGDAPEELP---AETKPDHVGDEKAKEIVVDD--DKKEGNKEKTEDAD-P 64
           A K  D++A++  A  E+     E+K ++   E+ KE   ++  D KE  KE++ D D  
Sbjct: 218 ANKEDDVEADTKVAEPEVEDKKTESKDENEDKEEEKEDEKEESMDDKEDEKEESNDDDKE 277

Query: 65  PEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIE 124
            EK+E+N  + +K+ +     K  +    +       T  KT ++ E  D  I+ +    
Sbjct: 278 DEKEESNDDKEDKKEDIKKSNKRGKGKTEK-------TRGKTKSDEEKKD--IEPKTPFF 337

Query: 125 NDVPPEKTESAEK 132
           +D P  + +S E+
Sbjct: 338 SDRPVRERKSVER 341

[Close]
BLAST of Cucsa.101220 vs. NCBI nr
Match: gi|449461819|ref|XP_004148639.1| (PREDICTED: neurofilament medium polypeptide-like [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 2.6e-76
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1 

Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE 60
           MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE
Sbjct: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE 60

Query: 61  KQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIEND 120
           KQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIEND
Sbjct: 61  KQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIEND 120

Query: 121 VPPEKTESAEKPTETEKEVKVTN 144
           VPPEKTESAEKPTETEKEVKVTN
Sbjct: 121 VPPEKTESAEKPTETEKEVKVTN 143

[Close]
BLAST of Cucsa.101220 vs. NCBI nr
Match: gi|700193184|gb|KGN48388.1| (hypothetical protein Csa_6G485140 [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 2.7e-73
Identity = 143/158 (90.51%), Postives = 143/158 (90.51%), Query Frame = 1 

Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK--------------- 60
           MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK               
Sbjct: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPPSLTDLFIHQ 60

Query: 61  KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEME 120
           KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEME
Sbjct: 61  KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEME 120

Query: 121 TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 144
           TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
Sbjct: 121 TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 158

[Close]
BLAST of Cucsa.101220 vs. NCBI nr
Match: gi|659080832|ref|XP_008441004.1| (PREDICTED: neurofilament heavy polypeptide isoform X3 [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-66
Identity = 129/147 (87.76%), Postives = 134/147 (91.16%), Query Frame = 1 

Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE 60
           MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTE ADPPE
Sbjct: 1   MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPE 60

Query: 61  KQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTE----METPDEAIKVEVT 120
           KQETNPPETEKQI+PLPEEKPSENNPPEP VSDSVTEN TV      METP+E IKVEVT
Sbjct: 61  KQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNTVISSEKLMETPNEEIKVEVT 120

Query: 121 IENDVPPEKTESAEKPTETEKEVKVTN 144
            ENDVPPEKTES+EKPTETEKEVKV N
Sbjct: 121 TENDVPPEKTESSEKPTETEKEVKVIN 147

[Close]
BLAST of Cucsa.101220 vs. NCBI nr
Match: gi|659080830|ref|XP_008441003.1| (PREDICTED: neurofilament medium polypeptide isoform X2 [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 5.1e-64
Identity = 129/158 (81.65%), Postives = 134/158 (84.81%), Query Frame = 1 

Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE 60
           MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTE ADPPE
Sbjct: 1   MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPE 60

Query: 61  KQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTE----METPDE------- 120
           KQETNPPETEKQI+PLPEEKPSENNPPEP VSDSVTEN TV      METP+E       
Sbjct: 61  KQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDP 120

Query: 121 ----AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 144
                IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Sbjct: 121 KNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN 158

[Close]
BLAST of Cucsa.101220 vs. NCBI nr
Match: gi|659080828|ref|XP_008441002.1| (PREDICTED: neurofilament heavy polypeptide isoform X1 [Cucumis melo])

HSP 1 Score: 241.9 bits (616), Expect = 6.9e-61
Identity = 129/174 (74.14%), Postives = 134/174 (77.01%), Query Frame = 1 

Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK--------------- 60
           MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK               
Sbjct: 1   MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDD 60

Query: 61  -KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTE- 120
            KEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSENNPPEP VSDSVTEN TV   
Sbjct: 61  QKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNTVISS 120

Query: 121 ---METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 144
              METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Sbjct: 121 EKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN 174

The following BLAST results are available for this feature:
BLAST of Cucsa.101220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFS6_CUCSA1.9e-7390.51Uncharacterized protein OS=Cucumis sativus GN=Csa_6G485140 PE=4 SV=1[more]
A0A151ZAW3_9MYCE6.8e-0732.41Alpha/beta hydrolase fold-1 domain-containing protein OS=Dictyostelium lacteum G... [more]
A0A151ZAW3_9MYCE2.6e-0630.07Alpha/beta hydrolase fold-1 domain-containing protein OS=Dictyostelium lacteum G... [more]
F6XQD6_CANLF1.5e-0633.56Uncharacterized protein OS=Canis lupus familiaris GN=MAP1B PE=4 SV=1[more]
L8Y8V6_TUPCH2.0e-0633.33Microtubule-associated protein 1B (Fragment) OS=Tupaia chinensis GN=TREES_T10000... [more]
BLAST of Cucsa.101220 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G55660.16.5e-0937.30 DEK domain-containing chromatin associated protein[more]
BLAST of Cucsa.101220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461819|ref|XP_004148639.1|2.6e-76100.00PREDICTED: neurofilament medium polypeptide-like [Cucumis sativus][more]
gi|700193184|gb|KGN48388.1|2.7e-7390.51hypothetical protein Csa_6G485140 [Cucumis sativus][more]
gi|659080832|ref|XP_008441004.1|1.4e-6687.76PREDICTED: neurofilament heavy polypeptide isoform X3 [Cucumis melo][more]
gi|659080830|ref|XP_008441003.1|5.1e-6481.65PREDICTED: neurofilament medium polypeptide isoform X2 [Cucumis melo][more]
gi|659080828|ref|XP_008441002.1|6.9e-6174.14PREDICTED: neurofilament heavy polypeptide isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.101220.1Cucsa.101220.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.101220Csa6G485140Cucumber (Chinese Long) v2cgycuB121
Cucsa.101220MELO3C008028Melon (DHL92) v3.5.1cgymeB132
Cucsa.101220CSPI06G26800Wild cucumber (PI 183967)cgycpiB122
Cucsa.101220CmaCh03G010730Cucurbita maxima (Rimu)cgycmaB0231
Cucsa.101220Lsi01G011270Bottle gourd (USVL1VR-Ls)cgylsiB125
Cucsa.101220MELO3C008028.2Melon (DHL92) v3.6.1cgymedB132
Cucsa.101220Cla97C01G014610Watermelon (97103) v2cgywmbB127
Cucsa.101220Carg10555Silver-seed gourdcarcgyB0280
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.101220Cucurbita pepo (Zucchini)cgycpeB0211
Cucsa.101220Cucurbita pepo (Zucchini)cgycpeB0220
Cucsa.101220Cucurbita pepo (Zucchini)cgycpeB0224
Cucsa.101220Silver-seed gourdcarcgyB0918
Cucsa.101220Cucumber (Chinese Long) v3cgycucB126
Cucsa.101220Watermelon (97103) v2cgywmbB129
Cucsa.101220Wax gourdcgywgoB150
Cucsa.101220Wax gourdcgywgoB153
Cucsa.101220Cucumber (Gy14) v1cgycgyB046
Cucsa.101220Cucurbita maxima (Rimu)cgycmaB0229
Cucsa.101220Cucurbita maxima (Rimu)cgycmaB0235
Cucsa.101220Cucurbita moschata (Rifu)cgycmoB0225
Cucsa.101220Cucurbita moschata (Rifu)cgycmoB0227
Cucsa.101220Cucurbita moschata (Rifu)cgycmoB0233
Cucsa.101220Wild cucumber (PI 183967)cgycpiB117
Cucsa.101220Cucumber (Chinese Long) v2cgycuB115
Cucsa.101220Watermelon (Charleston Gray)cgywcgB134
Cucsa.101220Watermelon (Charleston Gray)cgywcgB135
Cucsa.101220Watermelon (97103) v1cgywmB137
Cucsa.101220Watermelon (97103) v1cgywmB140