CmaCh01G003780 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh01G003780
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionSenescence-associated protein, putative
LocationCma_Chr01 : 1895674 .. 1896814 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCATCTTCTTCCTCCTTCGTCTCGGTCTTGATGGTTAAGTGCGTCTTCTCGATCAGCACCAGTCTCTGTTCTTGTCCTCATTCCTAAGCACCATCTTGCGTCCTCGTCCTTTTTGTCCTTGTTCTTAAGCATGACATTAGATAGCAAGCTTTAAGTGTTGTCGTTTATCTAAAAGTTGTTAGCATGTTGAAGAGAAGCGCGTCACAGATGAGAAATTCAAAGTGTAATAGAATTTTGGTGTCTGTCAATGTGGTTGGGAGCACTGGACCCATTAGGTTCGTGGCAAATAAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTACATCATATGCTCGCCTAGCTCGTTTACCAAATCTTGGAACTAATGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGGTACGTCTCATAAACCCTTTCTTTAAATTCTTAGTCACCAAAGAACTTATTTTTTTTTTTCCGTTCTTCAGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACGTGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACATGGCTGACCAAGTCTTTACTTACAACGTACAATATTATTGCACGTTGAGAAATTTGTCTGATGAAAAACAGTGTCGATCGAGGTGTGTTATAAATAATATAATTCGATCGTGTTTTTCGTTATAGAAGATGAAGTCATCTAATAAATAAAGTTTCTCAATCTAGCTTTATGATTCTAATTAACTAAGAATACACCGTATAAGTGTTCACCACTGGTAGATATTGCCTGTTTTAATTCATTATGTATCGTTGGCAGCCTCACAGTTTTAAAACATGTATGCTAGGTAGAAGTTCCAACAGCCTTATAGTGAATGTTCGTTACATATCACTGACGGCCTCACGATTTTAGAACGCGTCTACTACGGAGGCAACTTCACGATTTTAAGTAGTCACATCTGCTAGAGAGAGATTTCTATATTCTGTTCCCCTCTTCAACTATCTCTCCTTAGAAGTCAAGCGTCCTGGCTTGTACACCGCTCGATGTCTGACTCTAATATCATTTGTAATGGTTCAAGTTTACCGCTAGTCGATATTGT

mRNA sequence

TTCATCTTCTTCCTCCTTCGTCTCGGTCTTGATGGTTAAGTGCGTCTTCTCGATCAGCACCAGTCTCTGTTCTTGTCCTCATTCCTAAGCACCATCTTGCGTCCTCGTCCTTTTTGTCCTTGTTCTTAAGCATGACATTAGATAGCAAGCTTTAAGTGTTGTCGTTTATCTAAAAGTTGTTAGCATGTTGAAGAGAAGCGCGTCACAGATGAGAAATTCAAAGTGTAATAGAATTTTGGTGTCTGTCAATGTGGTTGGGAGCACTGGACCCATTAGGTTCGTGGCAAATAAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTACATCATATGCTCGCCTAGCTCGTTTACCAAATCTTGGAACTAATGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACGTGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACATGGCTGACCAAGTCTTTACTTACAACGTACAATATTATTGCACGTTGAGAAATTTGTCTGATGAAAAACAGTGTCGATCGAGGTAGAAGTTCCAACAGCCTTATAGTGAATGTTCGTTACATATCACTGACGGCCTCACGATTTTAGAACGCGTCTACTACGGAGGCAACTTCACGATTTTAAGTAGTCACATCTGCTAGAGAGAGATTTCTATATTCTGTTCCCCTCTTCAACTATCTCTCCTTAGAAGTCAAGCGTCCTGGCTTGTACACCGCTCGATGTCTGACTCTAATATCATTTGTAATGGTTCAAGTTTACCGCTAGTCGATATTGT

Coding sequence (CDS)

ATGTTGAAGAGAAGCGCGTCACAGATGAGAAATTCAAAGTGTAATAGAATTTTGGTGTCTGTCAATGTGGTTGGGAGCACTGGACCCATTAGGTTCGTGGCAAATAAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTACATCATATGCTCGCCTAGCTCGTTTACCAAATCTTGGAACTAATGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACGTGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACATGGCTGACCAAGTCTTTACTTACAACGTACAATATTATTGCACGTTGA

Protein sequence

MLKRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSRASLPKENGKNNWKTWLTKSLLTTYNIIAR
Homology
[Close]
BLAST of CmaCh01G003780 vs. TrEMBL
Match: A0A0A0L707_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G292550 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.6e-39
Identity = 87/138 (63.04%), Postives = 106/138 (76.81%), Query Frame = 1 

Query: 1   MLKRSASQM-----RNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLA 60
           MLKRS ++       N+KCNR LVS+NV+GSTGPIRFVAN+DDLVCE++KT+LT YAR A
Sbjct: 4   MLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQA 63

Query: 61  RLPNLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCKKEGTSRASL-------- 120
           RLP LGTNVDNF+L+CVND   DALS RE+IG+KQVRHFLLCKK+G+  + L        
Sbjct: 64  RLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQ 123

Query: 121 -PKENGKNNWKTWLTKSL 124
             +E G+N+WK WL KSL
Sbjct: 124 REEEKGRNHWKKWLNKSL 141

[Close]
BLAST of CmaCh01G003780 vs. TrEMBL
Match: D7T8Q4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05250 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-24
Identity = 62/132 (46.97%), Postives = 87/132 (65.91%), Query Frame = 1 

Query: 1   MLKRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNL 60
           +L +        K NR+L+S+NV+GS GPIRFV ++D+LV  V+ T L SYAR  RLP L
Sbjct: 2   LLYKQKKNQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPIL 61

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK---EGTS------RASLPKENG 120
           G++++NF+LYC N G DALS  E IG+   R+F+LCKK   + T+      RA +P++ G
Sbjct: 62  GSDLNNFLLYCSNAGSDALSPWETIGSNGTRNFMLCKKPQPQNTTEVGVEGRAGMPRK-G 121

Query: 121 KNNWKTWLTKSL 124
             +WK W+ KSL
Sbjct: 122 SGSWKAWINKSL 132

[Close]
BLAST of CmaCh01G003780 vs. TrEMBL
Match: A0A162AVI3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007310 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-24
Identity = 62/127 (48.82%), Postives = 79/127 (62.20%), Query Frame = 1 

Query: 6   ASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGTNVD 65
           + Q +N K NR+LVS+ V+GS GPIRFV N+ +LV  VM T L SYAR  RLP LG+N+D
Sbjct: 4   SKQKKNDKGNRLLVSITVMGSAGPIRFVVNEKELVASVMDTALKSYAREGRLPLLGSNLD 63

Query: 66  NFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSRA---------SLPKENGKNNWK 124
           +FVLYC   G +ALS  E IG+  VR+F+LCKK G  +          +     G  +WK
Sbjct: 64  HFVLYCPIAGTEALSPWETIGSFGVRNFMLCKKPGVDKVIDNGKQAGDATITRKGAGSWK 123

[Close]
BLAST of CmaCh01G003780 vs. TrEMBL
Match: D7TSP8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01210 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-23
Identity = 61/125 (48.80%), Postives = 80/125 (64.00%), Query Frame = 1 

Query: 3   KRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGT 62
           K    Q  N   NR L+SVNV+GS+GPIRFV N+ DL+  V+ T L SYAR  RLP+LG+
Sbjct: 13  KSFEEQNINGTNNRFLISVNVLGSSGPIRFVVNEGDLIAAVIDTALKSYARQGRLPHLGS 72

Query: 63  NVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKE-----GTSRASLPKENGKNNWKT 122
           +++ F+LYC N G DALS  E IG+   R+F+LCKK+       +R  +    G  +WKT
Sbjct: 73  DINQFLLYCANVGADALSPWELIGSCGGRNFVLCKKQIEPQMRETRPEMLGRKGSGSWKT 132

[Close]
BLAST of CmaCh01G003780 vs. TrEMBL
Match: A5BLY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031711 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.7e-23
Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = 1 

Query: 1   MLKRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNL 60
           +L +        K NR+L+S+NV+GS GPIRFV ++D+LV  V+ T L SYAR  RLP L
Sbjct: 2   LLYKQKKNQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPIL 61

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK---EGTS------RASLPKENG 120
           G++++NF+LYC N G DALS  E IG+   R+F+LCKK   + T+      RA +P++ G
Sbjct: 62  GSDLNNFLLYCSNAGSDALSPWETIGSNGXRNFMLCKKPQPQNTTEVGVEGRAGMPRK-G 121

Query: 121 KNNWKTWLTKS 123
             +WK W+  S
Sbjct: 122 SGSWKAWINNS 131

[Close]
BLAST of CmaCh01G003780 vs. TAIR10
Match: AT1G70780.1 (AT1G70780.1 unknown protein)

HSP 1 Score: 102.1 bits (253), Expect = 2.8e-22
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 1 

Query: 1   MLKRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNL 60
           +L     + +N+K NRIL+SV V+GS GPIRFVA +DDLV  V+ T L  YAR  RLP L
Sbjct: 2   LLYNKQKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLL 61

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK---------EGTSRASLPKENG 120
           G++ ++F+LYC   G +ALS  +AIG+   R+F+LC+K          G S +++     
Sbjct: 62  GSDFNDFLLYCPMVGPEALSTWDAIGSLGARNFMLCRKPEEKKVEESNGRSDSTINGARK 121

Query: 121 KNNWKTWLTKS 123
             + K W+ KS
Sbjct: 122 GGSLKAWINKS 132

[Close]
BLAST of CmaCh01G003780 vs. TAIR10
Match: AT1G23150.1 (AT1G23150.1 unknown protein)

HSP 1 Score: 102.1 bits (253), Expect = 2.8e-22
Identity = 58/123 (47.15%), Postives = 76/123 (61.79%), Query Frame = 1 

Query: 13  KCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGTNVDNFVLYCV 72
           K NRIL+SV  +GS GPIRFVAN+ DLV  V+ T L  YAR  RLP LG++ ++FV YC 
Sbjct: 12  KGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPILGSDFNDFVFYCP 71

Query: 73  NDGMDALSLREAIGAKQVRHFLLCKK--------EGTSRASLP----KENGKNNWKTWLT 124
             G  ALS  EAIG+  VR+F+LCKK        E   R++ P    ++    ++K W+ 
Sbjct: 72  MVGPGALSPWEAIGSVGVRNFMLCKKKPEEKKVEEDKGRSNFPINGARKGAGGSFKAWIN 131

[Close]
BLAST of CmaCh01G003780 vs. TAIR10
Match: AT5G37730.1 (AT5G37730.1 unknown protein)

HSP 1 Score: 100.5 bits (249), Expect = 8.0e-22
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 1 

Query: 13  KCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGTNVDNFVLYCV 72
           K  ++LVSVNV+GS GPIRF+AN+DD V   + TTL +YAR  R+P LG +VDNF+ Y +
Sbjct: 14  KNKKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVLGFDVDNFIFYSI 73

Query: 73  NDGMDALSLREAIGAKQVRHFLLCKKE 100
           N G + L  +E IG+  V +FL+CKKE
Sbjct: 74  NAGFNTLHPQEKIGSMDVTNFLMCKKE 100

[Close]
BLAST of CmaCh01G003780 vs. NCBI nr
Match: gi|778680754|ref|XP_011651392.1| (PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus])

HSP 1 Score: 169.1 bits (427), Expect = 5.2e-39
Identity = 87/138 (63.04%), Postives = 106/138 (76.81%), Query Frame = 1 

Query: 1   MLKRSASQM-----RNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLA 60
           MLKRS ++       N+KCNR LVS+NV+GSTGPIRFVAN+DDLVCE++KT+LT YAR A
Sbjct: 4   MLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQA 63

Query: 61  RLPNLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCKKEGTSRASL-------- 120
           RLP LGTNVDNF+L+CVND   DALS RE+IG+KQVRHFLLCKK+G+  + L        
Sbjct: 64  RLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQ 123

Query: 121 -PKENGKNNWKTWLTKSL 124
             +E G+N+WK WL KSL
Sbjct: 124 REEEKGRNHWKKWLNKSL 141

[Close]
BLAST of CmaCh01G003780 vs. NCBI nr
Match: gi|659114330|ref|XP_008457016.1| (PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 4.9e-37
Identity = 87/136 (63.97%), Postives = 101/136 (74.26%), Query Frame = 1 

Query: 1   MLKRSASQM-----RNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLA 60
           MLKRS +        N+KCNR LVS+NV+GSTGP+RFVAN+DDLVCEV+KT+LT YAR  
Sbjct: 4   MLKRSTTNKDKKVNTNTKCNRFLVSINVLGSTGPVRFVANEDDLVCEVIKTSLTLYARQG 63

Query: 61  RLPNLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCKKEGTS-------RASLP 120
           RLP LGTNVDNF LY VND   DALS RE+IG+KQVRHFLLCKK+GTS       + S  
Sbjct: 64  RLPILGTNVDNFFLYRVNDEKRDALSPRESIGSKQVRHFLLCKKQGTSHSLLLNEKTSRQ 123

Query: 121 KENGKNNWKTWLTKSL 124
           +E  K +WK WL KSL
Sbjct: 124 REKEKGSWKRWLNKSL 139

[Close]
BLAST of CmaCh01G003780 vs. NCBI nr
Match: gi|225424289|ref|XP_002284639.1| (PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera])

HSP 1 Score: 119.8 bits (299), Expect = 3.6e-24
Identity = 62/132 (46.97%), Postives = 87/132 (65.91%), Query Frame = 1 

Query: 1   MLKRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNL 60
           +L +        K NR+L+S+NV+GS GPIRFV ++D+LV  V+ T L SYAR  RLP L
Sbjct: 2   LLYKQKKNQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPIL 61

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK---EGTS------RASLPKENG 120
           G++++NF+LYC N G DALS  E IG+   R+F+LCKK   + T+      RA +P++ G
Sbjct: 62  GSDLNNFLLYCSNAGSDALSPWETIGSNGTRNFMLCKKPQPQNTTEVGVEGRAGMPRK-G 121

Query: 121 KNNWKTWLTKSL 124
             +WK W+ KSL
Sbjct: 122 SGSWKAWINKSL 132

[Close]
BLAST of CmaCh01G003780 vs. NCBI nr
Match: gi|1021048693|gb|KZN06473.1| (hypothetical protein DCAR_007310 [Daucus carota subsp. sativus])

HSP 1 Score: 118.6 bits (296), Expect = 8.1e-24
Identity = 62/127 (48.82%), Postives = 79/127 (62.20%), Query Frame = 1 

Query: 6   ASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGTNVD 65
           + Q +N K NR+LVS+ V+GS GPIRFV N+ +LV  VM T L SYAR  RLP LG+N+D
Sbjct: 4   SKQKKNDKGNRLLVSITVMGSAGPIRFVVNEKELVASVMDTALKSYAREGRLPLLGSNLD 63

Query: 66  NFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSRA---------SLPKENGKNNWK 124
           +FVLYC   G +ALS  E IG+  VR+F+LCKK G  +          +     G  +WK
Sbjct: 64  HFVLYCPIAGTEALSPWETIGSFGVRNFMLCKKPGVDKVIDNGKQAGDATITRKGAGSWK 123

[Close]
BLAST of CmaCh01G003780 vs. NCBI nr
Match: gi|731417469|ref|XP_002270144.3| (PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera])

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 61/125 (48.80%), Postives = 80/125 (64.00%), Query Frame = 1 

Query: 3   KRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGT 62
           K    Q  N   NR L+SVNV+GS+GPIRFV N+ DL+  V+ T L SYAR  RLP+LG+
Sbjct: 17  KSFEEQNINGTNNRFLISVNVLGSSGPIRFVVNEGDLIAAVIDTALKSYARQGRLPHLGS 76

Query: 63  NVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKE-----GTSRASLPKENGKNNWKT 122
           +++ F+LYC N G DALS  E IG+   R+F+LCKK+       +R  +    G  +WKT
Sbjct: 77  DINQFLLYCANVGADALSPWELIGSCGGRNFVLCKKQIEPQMRETRPEMLGRKGSGSWKT 136

The following BLAST results are available for this feature:
BLAST of CmaCh01G003780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh01G003780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L707_CUCSA3.6e-3963.04Uncharacterized protein OS=Cucumis sativus GN=Csa_3G292550 PE=4 SV=1[more]
D7T8Q4_VITVI2.5e-2446.97Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05250 PE=4 SV=... [more]
A0A162AVI3_DAUCA5.6e-2448.82Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007310 PE=4 SV=1[more]
D7TSP8_VITVI1.6e-2348.80Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01210 PE=4 SV=... [more]
A5BLY1_VITVI3.7e-2345.80Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031711 PE=4 SV=1[more]
BLAST of CmaCh01G003780 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70780.12.8e-2242.75 unknown protein[more]
AT1G23150.12.8e-2247.15 unknown protein[more]
AT5G37730.18.0e-2254.02 unknown protein[more]
BLAST of CmaCh01G003780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680754|ref|XP_011651392.1|5.2e-3963.04PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus][more]
gi|659114330|ref|XP_008457016.1|4.9e-3763.97PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo][more]
gi|225424289|ref|XP_002284639.1|3.6e-2446.97PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera][more]
gi|1021048693|gb|KZN06473.1|8.1e-2448.82hypothetical protein DCAR_007310 [Daucus carota subsp. sativus][more]
gi|731417469|ref|XP_002270144.3|2.4e-2348.80PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G003780.1CmaCh01G003780.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33270FAMILY NOT NAMEDcoord: 1..123
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh01G003780Cla013229Watermelon (97103) v1cmawmB434
CmaCh01G003780ClCG05G011590Watermelon (Charleston Gray)cmawcgB407
CmaCh01G003780CSPI03G20970Wild cucumber (PI 183967)cmacpiB458
CmaCh01G003780CmoCh01G003950Cucurbita moschata (Rifu)cmacmoB468
CmaCh01G003780Lsi05G003660Bottle gourd (USVL1VR-Ls)cmalsiB440
CmaCh01G003780Cp4.1LG02g17000Cucurbita pepo (Zucchini)cmacpeB491
CmaCh01G003780Cla97C05G093650Watermelon (97103) v2cmawmbB473
CmaCh01G003780Bhi01G001482Wax gourdcmawgoB0562
CmaCh01G003780Carg07462Silver-seed gourdcarcmaB1059
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh01G003780Cucumber (Chinese Long) v3cmacucB0547
CmaCh01G003780Cucurbita maxima (Rimu)cmacmaB255
CmaCh01G003780Cucumber (Gy14) v1cgycmaB0011
CmaCh01G003780Cucurbita moschata (Rifu)cmacmoB462
CmaCh01G003780Cucumber (Chinese Long) v2cmacuB455
CmaCh01G003780Melon (DHL92) v3.5.1cmameB431
CmaCh01G003780Cucurbita pepo (Zucchini)cmacpeB494
CmaCh01G003780Cucumber (Gy14) v2cgybcmaB368
CmaCh01G003780Melon (DHL92) v3.6.1cmamedB496
CmaCh01G003780Silver-seed gourdcarcmaB0669