CmaCh01G003780.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G003780.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Senescence-associated protein, putative
Location	Cma_Chr01 : 1895674 .. 1896814 (-)
Sequence length	869

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATCTTCTTCCTCCTTCGTCTCGGTCTTGATGGTTAAGTGCGTCTTCTCGATCAGCACCAGTCTCTGTTCTTGTCCTCATTCCTAAGCACCATCTTGCGTCCTCGTCCTTTTTGTCCTTGTTCTTAAGCATGACATTAGATAGCAAGCTTTAAGTGTTGTCGTTTATCTAAAAGTTGTTAGCATGTTGAAGAGAAGCGCGTCACAGATGAGAAATTCAAAGTGTAATAGAATTTTGGTGTCTGTCAATGTGGTTGGGAGCACTGGACCCATTAGGTTCGTGGCAAATAAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTACATCATATGCTCGCCTAGCTCGTTTACCAAATCTTGGAACTAATGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGGTACGTCTCATAAACCCTTTCTTTAAATTCTTAGTCACCAAAGAACTTATTTTTTTTTTTCCGTTCTTCAGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACGTGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACATGGCTGACCAAGTCTTTACTTACAACGTACAATATTATTGCACGTTGAGAAATTTGTCTGATGAAAAACAGTGTCGATCGAGGTGTGTTATAAATAATATAATTCGATCGTGTTTTTCGTTATAGAAGATGAAGTCATCTAATAAATAAAGTTTCTCAATCTAGCTTTATGATTCTAATTAACTAAGAATACACCGTATAAGTGTTCACCACTGGTAGATATTGCCTGTTTTAATTCATTATGTATCGTTGGCAGCCTCACAGTTTTAAAACATGTATGCTAGGTAGAAGTTCCAACAGCCTTATAGTGAATGTTCGTTACATATCACTGACGGCCTCACGATTTTAGAACGCGTCTACTACGGAGGCAACTTCACGATTTTAAGTAGTCACATCTGCTAGAGAGAGATTTCTATATTCTGTTCCCCTCTTCAACTATCTCTCCTTAGAAGTCAAGCGTCCTGGCTTGTACACCGCTCGATGTCTGACTCTAATATCATTTGTAATGGTTCAAGTTTACCGCTAGTCGATATTGT

mRNA sequence

TTCATCTTCTTCCTCCTTCGTCTCGGTCTTGATGGTTAAGTGCGTCTTCTCGATCAGCACCAGTCTCTGTTCTTGTCCTCATTCCTAAGCACCATCTTGCGTCCTCGTCCTTTTTGTCCTTGTTCTTAAGCATGACATTAGATAGCAAGCTTTAAGTGTTGTCGTTTATCTAAAAGTTGTTAGCATGTTGAAGAGAAGCGCGTCACAGATGAGAAATTCAAAGTGTAATAGAATTTTGGTGTCTGTCAATGTGGTTGGGAGCACTGGACCCATTAGGTTCGTGGCAAATAAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTACATCATATGCTCGCCTAGCTCGTTTACCAAATCTTGGAACTAATGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACGTGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACATGGCTGACCAAGTCTTTACTTACAACGTACAATATTATTGCACGTTGAGAAATTTGTCTGATGAAAAACAGTGTCGATCGAGGTAGAAGTTCCAACAGCCTTATAGTGAATGTTCGTTACATATCACTGACGGCCTCACGATTTTAGAACGCGTCTACTACGGAGGCAACTTCACGATTTTAAGTAGTCACATCTGCTAGAGAGAGATTTCTATATTCTGTTCCCCTCTTCAACTATCTCTCCTTAGAAGTCAAGCGTCCTGGCTTGTACACCGCTCGATGTCTGACTCTAATATCATTTGTAATGGTTCAAGTTTACCGCTAGTCGATATTGT

Coding sequence (CDS)

ATGTTGAAGAGAAGCGCGTCACAGATGAGAAATTCAAAGTGTAATAGAATTTTGGTGTCTGTCAATGTGGTTGGGAGCACTGGACCCATTAGGTTCGTGGCAAATAAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTACATCATATGCTCGCCTAGCTCGTTTACCAAATCTTGGAACTAATGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACGTGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACATGGCTGACCAAGTCTTTACTTACAACGTACAATATTATTGCACGTTGA

Protein sequence

MLKRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSRASLPKENGKNNWKTWLTKSLLTTYNIIAR

Homology

[Close]

BLAST of CmaCh01G003780.1 vs. TrEMBL
Match: A0A0A0L707_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G292550 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.6e-39
Identity = 87/138 (63.04%), Postives = 106/138 (76.81%), Query Frame = 1


Query: 1   MLKRSASQM-----RNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLA 60
           MLKRS ++       N+KCNR LVS+NV+GSTGPIRFVAN+DDLVCE++KT+LT YAR A
Sbjct: 4   MLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQA 63

Query: 61  RLPNLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCKKEGTSRASL-------- 120
           RLP LGTNVDNF+L+CVND   DALS RE+IG+KQVRHFLLCKK+G+  + L        
Sbjct: 64  RLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQ 123

Query: 121 -PKENGKNNWKTWLTKSL 124
             +E G+N+WK WL KSL
Sbjct: 124 REEEKGRNHWKKWLNKSL 141

[Close]

BLAST of CmaCh01G003780.1 vs. TrEMBL
Match: D7T8Q4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05250 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-24
Identity = 62/132 (46.97%), Postives = 87/132 (65.91%), Query Frame = 1


Query: 1   MLKRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNL 60
           +L +        K NR+L+S+NV+GS GPIRFV ++D+LV  V+ T L SYAR  RLP L
Sbjct: 2   LLYKQKKNQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPIL 61

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK---EGTS------RASLPKENG 120
           G++++NF+LYC N G DALS  E IG+   R+F+LCKK   + T+      RA +P++ G
Sbjct: 62  GSDLNNFLLYCSNAGSDALSPWETIGSNGTRNFMLCKKPQPQNTTEVGVEGRAGMPRK-G 121

Query: 121 KNNWKTWLTKSL 124
             +WK W+ KSL
Sbjct: 122 SGSWKAWINKSL 132

[Close]

BLAST of CmaCh01G003780.1 vs. TrEMBL
Match: A0A162AVI3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007310 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-24
Identity = 62/127 (48.82%), Postives = 79/127 (62.20%), Query Frame = 1


Query: 6   ASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGTNVD 65
           + Q +N K NR+LVS+ V+GS GPIRFV N+ +LV  VM T L SYAR  RLP LG+N+D
Sbjct: 4   SKQKKNDKGNRLLVSITVMGSAGPIRFVVNEKELVASVMDTALKSYAREGRLPLLGSNLD 63

Query: 66  NFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSRA---------SLPKENGKNNWK 124
           +FVLYC   G +ALS  E IG+  VR+F+LCKK G  +          +     G  +WK
Sbjct: 64  HFVLYCPIAGTEALSPWETIGSFGVRNFMLCKKPGVDKVIDNGKQAGDATITRKGAGSWK 123

[Close]

BLAST of CmaCh01G003780.1 vs. TrEMBL
Match: D7TSP8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01210 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-23
Identity = 61/125 (48.80%), Postives = 80/125 (64.00%), Query Frame = 1


Query: 3   KRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGT 62
           K    Q  N   NR L+SVNV+GS+GPIRFV N+ DL+  V+ T L SYAR  RLP+LG+
Sbjct: 13  KSFEEQNINGTNNRFLISVNVLGSSGPIRFVVNEGDLIAAVIDTALKSYARQGRLPHLGS 72

Query: 63  NVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKE-----GTSRASLPKENGKNNWKT 122
           +++ F+LYC N G DALS  E IG+   R+F+LCKK+       +R  +    G  +WKT
Sbjct: 73  DINQFLLYCANVGADALSPWELIGSCGGRNFVLCKKQIEPQMRETRPEMLGRKGSGSWKT 132

[Close]

BLAST of CmaCh01G003780.1 vs. TrEMBL
Match: A5BLY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031711 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.7e-23
Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = 1


Query: 1   MLKRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNL 60
           +L +        K NR+L+S+NV+GS GPIRFV ++D+LV  V+ T L SYAR  RLP L
Sbjct: 2   LLYKQKKNQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPIL 61

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK---EGTS------RASLPKENG 120
           G++++NF+LYC N G DALS  E IG+   R+F+LCKK   + T+      RA +P++ G
Sbjct: 62  GSDLNNFLLYCSNAGSDALSPWETIGSNGXRNFMLCKKPQPQNTTEVGVEGRAGMPRK-G 121

Query: 121 KNNWKTWLTKS 123
             +WK W+  S
Sbjct: 122 SGSWKAWINNS 131

[Close]

BLAST of CmaCh01G003780.1 vs. TAIR10
Match: AT1G70780.1 (AT1G70780.1 unknown protein)

HSP 1 Score: 102.1 bits (253), Expect = 2.8e-22
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 1


Query: 1   MLKRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNL 60
           +L     + +N+K NRIL+SV V+GS GPIRFVA +DDLV  V+ T L  YAR  RLP L
Sbjct: 2   LLYNKQKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLL 61

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK---------EGTSRASLPKENG 120
           G++ ++F+LYC   G +ALS  +AIG+   R+F+LC+K          G S +++     
Sbjct: 62  GSDFNDFLLYCPMVGPEALSTWDAIGSLGARNFMLCRKPEEKKVEESNGRSDSTINGARK 121

Query: 121 KNNWKTWLTKS 123
             + K W+ KS
Sbjct: 122 GGSLKAWINKS 132

[Close]

BLAST of CmaCh01G003780.1 vs. TAIR10
Match: AT1G23150.1 (AT1G23150.1 unknown protein)

HSP 1 Score: 102.1 bits (253), Expect = 2.8e-22
Identity = 58/123 (47.15%), Postives = 76/123 (61.79%), Query Frame = 1


Query: 13  KCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGTNVDNFVLYCV 72
           K NRIL+SV  +GS GPIRFVAN+ DLV  V+ T L  YAR  RLP LG++ ++FV YC 
Sbjct: 12  KGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPILGSDFNDFVFYCP 71

Query: 73  NDGMDALSLREAIGAKQVRHFLLCKK--------EGTSRASLP----KENGKNNWKTWLT 124
             G  ALS  EAIG+  VR+F+LCKK        E   R++ P    ++    ++K W+ 
Sbjct: 72  MVGPGALSPWEAIGSVGVRNFMLCKKKPEEKKVEEDKGRSNFPINGARKGAGGSFKAWIN 131

[Close]

BLAST of CmaCh01G003780.1 vs. TAIR10
Match: AT5G37730.1 (AT5G37730.1 unknown protein)

HSP 1 Score: 100.5 bits (249), Expect = 8.0e-22
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 1


Query: 13  KCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGTNVDNFVLYCV 72
           K  ++LVSVNV+GS GPIRF+AN+DD V   + TTL +YAR  R+P LG +VDNF+ Y +
Sbjct: 14  KNKKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVLGFDVDNFIFYSI 73

Query: 73  NDGMDALSLREAIGAKQVRHFLLCKKE 100
           N G + L  +E IG+  V +FL+CKKE
Sbjct: 74  NAGFNTLHPQEKIGSMDVTNFLMCKKE 100

[Close]

BLAST of CmaCh01G003780.1 vs. NCBI nr
Match: gi|778680754|ref|XP_011651392.1| (PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus])

HSP 1 Score: 169.1 bits (427), Expect = 5.2e-39
Identity = 87/138 (63.04%), Postives = 106/138 (76.81%), Query Frame = 1


Query: 1   MLKRSASQM-----RNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLA 60
           MLKRS ++       N+KCNR LVS+NV+GSTGPIRFVAN+DDLVCE++KT+LT YAR A
Sbjct: 4   MLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQA 63

Query: 61  RLPNLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCKKEGTSRASL-------- 120
           RLP LGTNVDNF+L+CVND   DALS RE+IG+KQVRHFLLCKK+G+  + L        
Sbjct: 64  RLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQ 123

Query: 121 -PKENGKNNWKTWLTKSL 124
             +E G+N+WK WL KSL
Sbjct: 124 REEEKGRNHWKKWLNKSL 141

[Close]

BLAST of CmaCh01G003780.1 vs. NCBI nr
Match: gi|659114330|ref|XP_008457016.1| (PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 4.9e-37
Identity = 87/136 (63.97%), Postives = 101/136 (74.26%), Query Frame = 1


Query: 1   MLKRSASQM-----RNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLA 60
           MLKRS +        N+KCNR LVS+NV+GSTGP+RFVAN+DDLVCEV+KT+LT YAR  
Sbjct: 4   MLKRSTTNKDKKVNTNTKCNRFLVSINVLGSTGPVRFVANEDDLVCEVIKTSLTLYARQG 63

Query: 61  RLPNLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCKKEGTS-------RASLP 120
           RLP LGTNVDNF LY VND   DALS RE+IG+KQVRHFLLCKK+GTS       + S  
Sbjct: 64  RLPILGTNVDNFFLYRVNDEKRDALSPRESIGSKQVRHFLLCKKQGTSHSLLLNEKTSRQ 123

Query: 121 KENGKNNWKTWLTKSL 124
           +E  K +WK WL KSL
Sbjct: 124 REKEKGSWKRWLNKSL 139

[Close]

BLAST of CmaCh01G003780.1 vs. NCBI nr
Match: gi|225424289|ref|XP_002284639.1| (PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera])

HSP 1 Score: 119.8 bits (299), Expect = 3.6e-24
Identity = 62/132 (46.97%), Postives = 87/132 (65.91%), Query Frame = 1


Query: 1   MLKRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNL 60
           +L +        K NR+L+S+NV+GS GPIRFV ++D+LV  V+ T L SYAR  RLP L
Sbjct: 2   LLYKQKKNQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPIL 61

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK---EGTS------RASLPKENG 120
           G++++NF+LYC N G DALS  E IG+   R+F+LCKK   + T+      RA +P++ G
Sbjct: 62  GSDLNNFLLYCSNAGSDALSPWETIGSNGTRNFMLCKKPQPQNTTEVGVEGRAGMPRK-G 121

Query: 121 KNNWKTWLTKSL 124
             +WK W+ KSL
Sbjct: 122 SGSWKAWINKSL 132

[Close]

BLAST of CmaCh01G003780.1 vs. NCBI nr
Match: gi|1021048693|gb|KZN06473.1| (hypothetical protein DCAR_007310 [Daucus carota subsp. sativus])

HSP 1 Score: 118.6 bits (296), Expect = 8.1e-24
Identity = 62/127 (48.82%), Postives = 79/127 (62.20%), Query Frame = 1


Query: 6   ASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGTNVD 65
           + Q +N K NR+LVS+ V+GS GPIRFV N+ +LV  VM T L SYAR  RLP LG+N+D
Sbjct: 4   SKQKKNDKGNRLLVSITVMGSAGPIRFVVNEKELVASVMDTALKSYAREGRLPLLGSNLD 63

Query: 66  NFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSRA---------SLPKENGKNNWK 124
           +FVLYC   G +ALS  E IG+  VR+F+LCKK G  +          +     G  +WK
Sbjct: 64  HFVLYCPIAGTEALSPWETIGSFGVRNFMLCKKPGVDKVIDNGKQAGDATITRKGAGSWK 123

[Close]

BLAST of CmaCh01G003780.1 vs. NCBI nr
Match: gi|731417469|ref|XP_002270144.3| (PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera])

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 61/125 (48.80%), Postives = 80/125 (64.00%), Query Frame = 1


Query: 3   KRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNLGT 62
           K    Q  N   NR L+SVNV+GS+GPIRFV N+ DL+  V+ T L SYAR  RLP+LG+
Sbjct: 17  KSFEEQNINGTNNRFLISVNVLGSSGPIRFVVNEGDLIAAVIDTALKSYARQGRLPHLGS 76

Query: 63  NVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKE-----GTSRASLPKENGKNNWKT 122
           +++ F+LYC N G DALS  E IG+   R+F+LCKK+       +R  +    G  +WKT
Sbjct: 77  DINQFLLYCANVGADALSPWELIGSCGGRNFVLCKKQIEPQMRETRPEMLGRKGSGSWKT 136

The following BLAST results are available for this feature:

BLAST of CmaCh01G003780.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh01G003780.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L707_CUCSA	3.6e-39	63.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G292550 PE=4 SV=1	[more]
D7T8Q4_VITVI	2.5e-24	46.97	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05250 PE=4 SV=...	[more]
A0A162AVI3_DAUCA	5.6e-24	48.82	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007310 PE=4 SV=1	[more]
D7TSP8_VITVI	1.6e-23	48.80	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01210 PE=4 SV=...	[more]
A5BLY1_VITVI	3.7e-23	45.80	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031711 PE=4 SV=1	[more]

BLAST of CmaCh01G003780.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70780.1	2.8e-22	42.75	unknown protein	[more]
AT1G23150.1	2.8e-22	47.15	unknown protein	[more]
AT5G37730.1	8.0e-22	54.02	unknown protein	[more]

BLAST of CmaCh01G003780.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680754\|ref\|XP_011651392.1\|	5.2e-39	63.04	PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus]	[more]
gi\|659114330\|ref\|XP_008457016.1\|	4.9e-37	63.97	PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo]	[more]
gi\|225424289\|ref\|XP_002284639.1\|	3.6e-24	46.97	PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera]	[more]
gi\|1021048693\|gb\|KZN06473.1\|	8.1e-24	48.82	hypothetical protein DCAR_007310 [Daucus carota subsp. sativus]	[more]
gi\|731417469\|ref\|XP_002270144.3\|	2.4e-23	48.80	PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh01G003780	CmaCh01G003780	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh01G003780.1	CmaCh01G003780.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G003780.1.three_prime_UTR.2	CmaCh01G003780.1.three_prime_UTR.2	three_prime_UTR
CmaCh01G003780.1.three_prime_UTR.1	CmaCh01G003780.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G003780.1.CDS.2	CmaCh01G003780.1.CDS.2	CDS
CmaCh01G003780.1.CDS.1	CmaCh01G003780.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G003780.1.five_prime_UTR.1	CmaCh01G003780.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G003780.1.exon.3	CmaCh01G003780.1.exon.3	exon
CmaCh01G003780.1.exon.2	CmaCh01G003780.1.exon.2	exon
CmaCh01G003780.1.exon.1	CmaCh01G003780.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33270	FAMILY NOT NAMED	coord: 1..123 score: 2.2