CSPI03G20970 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G20970
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Senescence-associated protein, putative
Location	Chr3 : 17085774 .. 17086498 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATCGTTCTCTCTTCATCTTGATCATTTTACTCCTTCTTTGTCTTGGGTCGTCTCAGATCGACATCAACCTCCATCCATCTTGTCCTCGTCCTCCAGCAAGTTGTTCAATAACTAAATTTTAGATTATCAAATTACCTTAATCTTTTTCTTTCCATTCTCTCGTACTCTCTAACCAAAAAAAATGAATAGTATGTTGAAGAGAAGCACCACAAAGAAGGGTAAGAAAGTGAATACAAATACAAAGTGTAATAGATTTTTGGTGTCTATCAATGTCCTTGGGAGCACAGGACCAATTAGATTTGTGGCAAATGAAGATGATTTGGTTTGTGAGATTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAACTTTATTCTCTATTGTGTTAACGATGAAAAAAGGGATGGTATGTCTTTCATATAACACTTCTTTTTTTAATTTTCTTTTAACATTATCAAAGAACTCAATTTGCTTTCATTCTTTTTCTAACAGCTCTAAGCCCAAGGGAAAGTATAGGATCAAACCAAGTAAGGCACTTTTTGCTATGTAAAAAGCAAGGGAGTCCACGTTCATTATTGCTTAACGAGAAAATGTCAAGGCAAAGGGAAGAAGAAAAGGGGAGAAATCATTGGAAGAAATGGCTCAACAAATCATTGAGTTACAGCATTCAATCTCATTGCATGCTGTAA

mRNA sequence

ATGAATAGTATGTTGAAGAGAAGCACCACAAAGAAGGGTAAGAAAGTGAATACAAATACAAAGTGTAATAGATTTTTGGTGTCTATCAATGTCCTTGGGAGCACAGGACCAATTAGATTTGTGGCAAATGAAGATGATTTGGTTTGTGAGATTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAACTTTATTCTCTATTGTGTTAACGATGAAAAAAGGGATGCTCTAAGCCCAAGGGAAAGTATAGGATCAAACCAAGTAAGGCACTTTTTGCTATGTAAAAAGCAAGGGAGTCCACGTTCATTATTGCTTAACGAGAAAATGTCAAGGCAAAGGGAAGAAGAAAAGGGGAGAAATCATTGGAAGAAATGGCTCAACAAATCATTGAGTTACAGCATTCAATCTCATTGCATGCTGTAA

Coding sequence (CDS)

ATGAATAGTATGTTGAAGAGAAGCACCACAAAGAAGGGTAAGAAAGTGAATACAAATACAAAGTGTAATAGATTTTTGGTGTCTATCAATGTCCTTGGGAGCACAGGACCAATTAGATTTGTGGCAAATGAAGATGATTTGGTTTGTGAGATTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAACTTTATTCTCTATTGTGTTAACGATGAAAAAAGGGATGCTCTAAGCCCAAGGGAAAGTATAGGATCAAACCAAGTAAGGCACTTTTTGCTATGTAAAAAGCAAGGGAGTCCACGTTCATTATTGCTTAACGAGAAAATGTCAAGGCAAAGGGAAGAAGAAAAGGGGAGAAATCATTGGAAGAAATGGCTCAACAAATCATTGAGTTACAGCATTCAATCTCATTGCATGCTGTAA

Homology

[Close]

BLAST of CSPI03G20970 vs. TrEMBL
Match: A0A0A0L707_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G292550 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 6.0e-78
Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 1


Query: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYA 60
           MNSMLKRSTTKKGKKVNTNTKCNRFLVSINV+GSTGPIRFVANEDDLVCEIIKTSLTLYA
Sbjct: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60

Query: 61  RQARLPILGTNVDNFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKM 120
           RQARLPILGTNVDNFIL+CVNDEKRDALSPRESIGS QVRHFLLCKKQGSP SLLLNEKM
Sbjct: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120

Query: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 152
           SRQREEEKGRNHWKKWLNKSLSYSIQSHCML
Sbjct: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 151

[Close]

BLAST of CSPI03G20970 vs. TrEMBL
Match: D7T8Q4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05250 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.0e-28
Identity = 72/137 (52.55%), Postives = 91/137 (66.42%), Query Frame = 1


Query: 12  KGKKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTN 71
           K KK  +  K NR L+SINVLGS GPIRFV +ED+LV  +I T+L  YAR+ RLPILG++
Sbjct: 5   KQKKNQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPILGSD 64

Query: 72  VDNFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKMSRQREEEKGRN 131
           ++NF+LYC N    DALSP E+IGSN  R+F+LCKK   P++        R     KG  
Sbjct: 65  LNNFLLYCSN-AGSDALSPWETIGSNGTRNFMLCKKP-QPQNTTEVGVEGRAGMPRKGSG 124

Query: 132 HWKKWLNKSLSYSIQSH 149
            WK W+NKSL+  I SH
Sbjct: 125 SWKAWINKSLNLKISSH 139

[Close]

BLAST of CSPI03G20970 vs. TrEMBL
Match: A0A059ADI0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01592 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27
Identity = 70/146 (47.95%), Postives = 94/146 (64.38%), Query Frame = 1


Query: 3   SMLKRSTTKKGKKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYARQ 62
           S+L +   KK    +  +K NRFLV++NVLGS GPIRFV  EDDLV  +I+T+L  YAR+
Sbjct: 16  SLLMQKHKKKNSSDDQGSKKNRFLVTVNVLGSAGPIRFVVKEDDLVSAVIQTALKTYARE 75

Query: 63  ARLPILGTNVDNFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKMSR 122
            RLP+LGT+V+NF+L+   +   DAL+P E+IGS   R+F+LCKKQ  P+      +M  
Sbjct: 76  GRLPVLGTDVNNFVLHAAANS--DALNPSEAIGSQGGRNFVLCKKQIQPQMTEARSEMI- 135

Query: 123 QREEEKGRNHWKKWLNKSLSYSIQSH 149
                K    WK WLNKS S+ I S+
Sbjct: 136 ---SHKRSGSWKAWLNKSFSFKIPSY 155

[Close]

BLAST of CSPI03G20970 vs. TrEMBL
Match: D7TSP8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01210 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27
Identity = 76/149 (51.01%), Postives = 95/149 (63.76%), Query Frame = 1


Query: 4   MLKRSTTKKG-KKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYARQ 63
           ML+R   KK  ++ N N   NRFL+S+NVLGS+GPIRFV NE DL+  +I T+L  YARQ
Sbjct: 5   MLRRRQKKKSFEEQNINGTNNRFLISVNVLGSSGPIRFVVNEGDLIAAVIDTALKSYARQ 64

Query: 64  ARLPILGTNVDNFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKMSR 123
            RLP LG++++ F+LYC N    DALSP E IGS   R+F+LCKKQ  P       +M  
Sbjct: 65  GRLPHLGSDINQFLLYCAN-VGADALSPWELIGSCGGRNFVLCKKQIEP-------QMRE 124

Query: 124 QREE---EKGRNHWKKWLNKSLSYSIQSH 149
            R E    KG   WK WLNKS ++ I SH
Sbjct: 125 TRPEMLGRKGSGSWKTWLNKSFNFKILSH 145

[Close]

BLAST of CSPI03G20970 vs. TrEMBL
Match: A0A059AE78_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01593 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-26
Identity = 70/133 (52.63%), Postives = 87/133 (65.41%), Query Frame = 1


Query: 11  KKGKKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGT 70
           KK    N +T  NRFLV INVLGSTGPIRFV  +DDLV  +I+T+L  YAR+ RLP+LGT
Sbjct: 16  KKNSDDNQSTNKNRFLVIINVLGSTGPIRFVVKKDDLVSGVIQTALKTYAREGRLPVLGT 75

Query: 71  NVDNFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKMSRQREEEKGR 130
           +V+NFIL+   D    AL P E+IGS + R+F+LCKKQ  P+      +M       KG 
Sbjct: 76  DVNNFILHDAADYA--ALHPAEAIGSREGRNFVLCKKQIQPQMTEARSEMI----SRKGS 135

Query: 131 NHWKKWLNKSLSY 144
             WK WLNKS S+
Sbjct: 136 GSWKAWLNKSFSF 142

[Close]

BLAST of CSPI03G20970 vs. TAIR10
Match: AT1G23150.1 (AT1G23150.1 unknown protein)

HSP 1 Score: 112.8 bits (281), Expect = 1.8e-25
Identity = 65/148 (43.92%), Postives = 88/148 (59.46%), Query Frame = 1


Query: 14  KKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTNVD 73
           KK N   K NR L+S+  LGS GPIRFVANE DLV  +I T+L  YAR+ RLPILG++ +
Sbjct: 5   KKKNQIVKGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPILGSDFN 64

Query: 74  NFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKMSRQREEEKGRNH- 133
           +F+ YC       ALSP E+IGS  VR+F+LCKK+   + +          EE+KGR++ 
Sbjct: 65  DFVFYCPM-VGPGALSPWEAIGSVGVRNFMLCKKKPEEKKV----------EEDKGRSNF 124

Query: 134 ------------WKKWLNKSLSYSIQSH 149
                       +K W+NKSL   + +H
Sbjct: 125 PINGARKGAGGSFKAWINKSLRLKVTTH 141

[Close]

BLAST of CSPI03G20970 vs. TAIR10
Match: AT1G70780.1 (AT1G70780.1 unknown protein)

HSP 1 Score: 107.1 bits (266), Expect = 9.9e-24
Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = 1


Query: 14  KKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTNVD 73
           +K N N K NR L+S+ VLGS GPIRFVA EDDLV  +I T+L  YAR+ RLP+LG++ +
Sbjct: 7   QKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLLGSDFN 66

Query: 74  NFILYC--VNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKMSRQREEEKGRN 133
           +F+LYC  V  E   ALS  ++IGS   R+F+LC+K    +    N +        +   
Sbjct: 67  DFLLYCPMVGPE---ALSTWDAIGSLGARNFMLCRKPEEKKVEESNGRSDSTINGARKGG 126

Query: 134 HWKKWLNKSLSYSIQSH 149
             K W+NKS +  + SH
Sbjct: 127 SLKAWINKSFNLKVSSH 140

[Close]

BLAST of CSPI03G20970 vs. TAIR10
Match: AT5G37730.1 (AT5G37730.1 unknown protein)

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-22
Identity = 64/131 (48.85%), Postives = 79/131 (60.31%), Query Frame = 1


Query: 5   LKRSTTKKGKKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYARQAR 64
           + R+   KG     N K    LVS+NVLGS GPIRF+ANEDD V   I T+L  YARQ R
Sbjct: 1   MNRNENVKGVMKRKNKK---LLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGR 60

Query: 65  LPILGTNVDNFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKMSRQR 124
           +P+LG +VDNFI Y +N    + L P+E IGS  V +FL+CKK+  PR L   EK+   R
Sbjct: 61  IPVLGFDVDNFIFYSIN-AGFNTLHPQEKIGSMDVTNFLMCKKE--PRPL---EKVEGIR 120

Query: 125 EEEKGRNH-WK 135
           E      H WK
Sbjct: 121 ESRARIGHGWK 122

[Close]

BLAST of CSPI03G20970 vs. NCBI nr
Match: gi|778680754|ref|XP_011651392.1| (PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 8.6e-78
Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 1


Query: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYA 60
           MNSMLKRSTTKKGKKVNTNTKCNRFLVSINV+GSTGPIRFVANEDDLVCEIIKTSLTLYA
Sbjct: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60

Query: 61  RQARLPILGTNVDNFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKM 120
           RQARLPILGTNVDNFIL+CVNDEKRDALSPRESIGS QVRHFLLCKKQGSP SLLLNEKM
Sbjct: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120

Query: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 152
           SRQREEEKGRNHWKKWLNKSLSYSIQSHCML
Sbjct: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 151

[Close]

BLAST of CSPI03G20970 vs. NCBI nr
Match: gi|659114330|ref|XP_008457016.1| (PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 1.1e-67
Identity = 133/151 (88.08%), Postives = 139/151 (92.05%), Query Frame = 1


Query: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYA 60
           MNSMLKRSTT K KKVNTNTKCNRFLVSINVLGSTGP+RFVANEDDLVCE+IKTSLTLYA
Sbjct: 1   MNSMLKRSTTNKDKKVNTNTKCNRFLVSINVLGSTGPVRFVANEDDLVCEVIKTSLTLYA 60

Query: 61  RQARLPILGTNVDNFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKM 120
           RQ RLPILGTNVDNF LY VNDEKRDALSPRESIGS QVRHFLLCKKQG+  SLLLNEK 
Sbjct: 61  RQGRLPILGTNVDNFFLYRVNDEKRDALSPRESIGSKQVRHFLLCKKQGTSHSLLLNEKT 120

Query: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 152
           SRQRE+EKG   WK+WLNKSL+YSIQSHCML
Sbjct: 121 SRQREKEKG--SWKRWLNKSLNYSIQSHCML 149

[Close]

BLAST of CSPI03G20970 vs. NCBI nr
Match: gi|225424289|ref|XP_002284639.1| (PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera])

HSP 1 Score: 133.7 bits (335), Expect = 2.8e-28
Identity = 72/137 (52.55%), Postives = 91/137 (66.42%), Query Frame = 1


Query: 12  KGKKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTN 71
           K KK  +  K NR L+SINVLGS GPIRFV +ED+LV  +I T+L  YAR+ RLPILG++
Sbjct: 5   KQKKNQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPILGSD 64

Query: 72  VDNFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKMSRQREEEKGRN 131
           ++NF+LYC N    DALSP E+IGSN  R+F+LCKK   P++        R     KG  
Sbjct: 65  LNNFLLYCSN-AGSDALSPWETIGSNGTRNFMLCKKP-QPQNTTEVGVEGRAGMPRKGSG 124

Query: 132 HWKKWLNKSLSYSIQSH 149
            WK W+NKSL+  I SH
Sbjct: 125 SWKAWINKSLNLKISSH 139

[Close]

BLAST of CSPI03G20970 vs. NCBI nr
Match: gi|658015440|ref|XP_008343057.1| (PREDICTED: uncharacterized protein LOC103405829 [Malus domestica])

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27
Identity = 71/149 (47.65%), Postives = 99/149 (66.44%), Query Frame = 1


Query: 4   MLKRSTTKKGKKVNTNT----KCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLY 63
           +L+R   +K KK +T+     K NRFL+++NVLGS GPIRFV NEDDLV  +I T+L  Y
Sbjct: 6   VLERINLQKHKKTSTDATHTVKTNRFLITVNVLGSAGPIRFVVNEDDLVARVIDTALKSY 65

Query: 64  ARQARLPILGTNVDNFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEK 123
           AR+ RLP+LG++V +F+L+C N    DALSP E+IGS   R+F+L KKQ   ++  + E+
Sbjct: 66  AREGRLPVLGSDVKDFLLHCAN-AGSDALSPWETIGSRGGRNFVLSKKQKQVQNNNIAER 125

Query: 124 MSRQREEEKGRNHWKKWLNKSLSYSIQSH 149
            S     +   + WK WLNKS ++ I SH
Sbjct: 126 KSEITAPKGTVSSWKAWLNKSFTFKISSH 153

[Close]

BLAST of CSPI03G20970 vs. NCBI nr
Match: gi|702479021|ref|XP_010032694.1| (PREDICTED: uncharacterized protein At4g22758-like [Eucalyptus grandis])

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27
Identity = 70/146 (47.95%), Postives = 94/146 (64.38%), Query Frame = 1


Query: 3   SMLKRSTTKKGKKVNTNTKCNRFLVSINVLGSTGPIRFVANEDDLVCEIIKTSLTLYARQ 62
           S+L +   KK    +  +K NRFLV++NVLGS GPIRFV  EDDLV  +I+T+L  YAR+
Sbjct: 16  SLLMQKHKKKNSSDDQGSKKNRFLVTVNVLGSAGPIRFVVKEDDLVSAVIQTALKTYARE 75

Query: 63  ARLPILGTNVDNFILYCVNDEKRDALSPRESIGSNQVRHFLLCKKQGSPRSLLLNEKMSR 122
            RLP+LGT+V+NF+L+   +   DAL+P E+IGS   R+F+LCKKQ  P+      +M  
Sbjct: 76  GRLPVLGTDVNNFVLHAAANS--DALNPSEAIGSQGGRNFVLCKKQIQPQMTEARSEMI- 135

Query: 123 QREEEKGRNHWKKWLNKSLSYSIQSH 149
                K    WK WLNKS S+ I S+
Sbjct: 136 ---SHKRSGSWKAWLNKSFSFKIPSY 155

The following BLAST results are available for this feature:

BLAST of CSPI03G20970 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G20970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L707_CUCSA	6.0e-78	97.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G292550 PE=4 SV=1	[more]
D7T8Q4_VITVI	2.0e-28	52.55	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05250 PE=4 SV=...	[more]
A0A059ADI0_EUCGR	1.3e-27	47.95	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01592 PE=4 SV=1	[more]
D7TSP8_VITVI	1.3e-27	51.01	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01210 PE=4 SV=...	[more]
A0A059AE78_EUCGR	1.1e-26	52.63	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01593 PE=4 SV=1	[more]

BLAST of CSPI03G20970 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23150.1	1.8e-25	43.92	unknown protein	[more]
AT1G70780.1	9.9e-24	43.80	unknown protein	[more]
AT5G37730.1	5.4e-22	48.85	unknown protein	[more]

BLAST of CSPI03G20970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680754\|ref\|XP_011651392.1\|	8.6e-78	97.35	PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus]	[more]
gi\|659114330\|ref\|XP_008457016.1\|	1.1e-67	88.08	PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo]	[more]
gi\|225424289\|ref\|XP_002284639.1\|	2.8e-28	52.55	PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera]	[more]
gi\|658015440\|ref\|XP_008343057.1\|	1.4e-27	47.65	PREDICTED: uncharacterized protein LOC103405829 [Malus domestica]	[more]
gi\|702479021\|ref\|XP_010032694.1\|	1.8e-27	47.95	PREDICTED: uncharacterized protein At4g22758-like [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G20970.1	CSPI03G20970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33270	FAMILY NOT NAMED	coord: 1..148 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G20970	Cla013229	Watermelon (97103) v1	cpiwmB236
CSPI03G20970	Csa3G292550	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G20970	ClCG05G011590	Watermelon (Charleston Gray)	cpiwcgB230
CSPI03G20970	Lsi05G003660	Bottle gourd (USVL1VR-Ls)	cpilsiB210
CSPI03G20970	MELO3C032058.2	Melon (DHL92) v3.6.1	cpimedB240
CSPI03G20970	CsaV3_3G020860	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G20970	Cla97C05G093650	Watermelon (97103) v2	cpiwmbB224
CSPI03G20970	Bhi01G001482	Wax gourd	cpiwgoB271
CSPI03G20970	Cucsa.031200	Cucumber (Gy14) v1	cgycpiB003
CSPI03G20970	CmaCh01G003780	Cucurbita maxima (Rimu)	cmacpiB458
CSPI03G20970	CmoCh01G003950	Cucurbita moschata (Rifu)	cmocpiB446
CSPI03G20970	CsGy3G020520	Cucumber (Gy14) v2	cgybcpiB110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G20970	Watermelon (97103) v2	cpiwmbB213
CSPI03G20970	Wax gourd	cpiwgoB303
CSPI03G20970	Cucurbita maxima (Rimu)	cmacpiB244
CSPI03G20970	Cucurbita moschata (Rifu)	cmocpiB232
CSPI03G20970	Melon (DHL92) v3.5.1	cpimeB243
CSPI03G20970	Cucurbita pepo (Zucchini)	cpecpiB602
CSPI03G20970	Bottle gourd (USVL1VR-Ls)	cpilsiB203
CSPI03G20970	Melon (DHL92) v3.6.1	cpimedB229
CSPI03G20970	Silver-seed gourd	carcpiB0519
CSPI03G20970	Silver-seed gourd	carcpiB0520
CSPI03G20970	Silver-seed gourd	carcpiB0798