CsaV3_3G020860 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G020860
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Senescence-associated protein
Location	chr3 : 17210431 .. 17211477 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TACATTTTAACTTCACATATTGAACATGTTGACCATGTCCCTTGAAACGATATATTATTGATGGTGGAAACTATATATATCGTTCTCTCTTCATCTTGATCATTTTCCTCCTTTGTCTTGGGTCGTCTCAGATCGACATCAACCTCCATCCATCTTGTCCTCGTCCTCCAGCAAGTTGGTCAATAACTAAATTTTAGATTATCAAATTACCTTGATCTTTTTCTTTCCATTCTCTCATACTCTCTTACCAAAAAAAAATGAATAGTATGTTGAAGAGAAGCACCACAAAGAAGGGTAAGAAAGTGAATACAAATACAAAGTGTAATAGATTTTTGGTGTCTATCAATGTCATTGGGAGCACAGGACCAATTAGATTTGTGGCAAATGAAGATGATTTGGTTTGTGAGATTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAACTTTATTCTCTTTTGTGTTAACGATGAAAAAAGGGATGGTATGTCTTTCATATAACACTTCTTTTTTTAATTTTCTTTTAACATTATCAAACAACTCAATTTGCTTTCATTCTTTTTCTAACAGCTCTAAGCCCAAGGGAAAGTATAGGATCAAAGCAAGTAAGGCACTTTTTGCTATGTAAAAAGCAAGGGAGTCCACATTCATTATTGCTTAACGAGAAAATGTCAAGGCAAAGGGAAGAAGAAAAGGGGAGAAATCATTGGAAGAAATGGCTCAACAAATCATTGAGTTACAGCATTCAATCTCATTGCATGCTGTAATCGATCAACGTGTTCTGTAAATAATGAGGATCGGTTCTCACGTCCAATTTTCCATTGTAAAAGTTGAAGACATGTATACAATAAATAAACTTTTTCATCTCAAATATTATGGTTTGGTCCTTCTGATTTTGTATAAATTATTGTACTTACAAAAAAAAAAAACTAGGTCTAAGTCATCCCTAAACTTAGTATCTTATTCTATTTTGGTTCCTAAACTTTTTTAAACAATATATTTTGGTCATTACCAT

mRNA sequence

ATGAATAGTATGTTGAAGAGAAGCACCACAAAGAAGGGTAAGAAAGTGAATACAAATACAAAGTGTAATAGATTTTTGGTGTCTATCAATGTCATTGGGAGCACAGGACCAATTAGATTTGTGGCAAATGAAGATGATTTGGTTTGTGAGATTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAACTTTATTCTCTTTTGTGTTAACGATGAAAAAAGGGATGCTCTAAGCCCAAGGGAAAGTATAGGATCAAAGCAAGTAAGGCACTTTTTGCTATGTAAAAAGCAAGGGAGTCCACATTCATTATTGCTTAACGAGAAAATGTCAAGGCAAAGGGAAGAAGAAAAGGGGAGAAATCATTGGAAGAAATGGCTCAACAAATCATTGAGTTACAGCATTCAATCTCATTGCATGCTGTAA

Coding sequence (CDS)

ATGAATAGTATGTTGAAGAGAAGCACCACAAAGAAGGGTAAGAAAGTGAATACAAATACAAAGTGTAATAGATTTTTGGTGTCTATCAATGTCATTGGGAGCACAGGACCAATTAGATTTGTGGCAAATGAAGATGATTTGGTTTGTGAGATTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAACTTTATTCTCTTTTGTGTTAACGATGAAAAAAGGGATGCTCTAAGCCCAAGGGAAAGTATAGGATCAAAGCAAGTAAGGCACTTTTTGCTATGTAAAAAGCAAGGGAGTCCACATTCATTATTGCTTAACGAGAAAATGTCAAGGCAAAGGGAAGAAGAAAAGGGGAGAAATCATTGGAAGAAATGGCTCAACAAATCATTGAGTTACAGCATTCAATCTCATTGCATGCTGTAA

Protein sequence

MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQREEEKGRNHWKKWLNKSLSYSIQSHCML

Homology

[Close]

BLAST of CsaV3_3G020860 vs. NCBI nr
Match: XP_011651392.1 (PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus] >KGN57775.1 hypothetical protein Csa_3G292550 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 1.0e-79
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60
           MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA
Sbjct: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60

Query: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120
           RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM
Sbjct: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120

Query: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 152
           SRQREEEKGRNHWKKWLNKSLSYSIQSHCML
Sbjct: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 151

[Close]

BLAST of CsaV3_3G020860 vs. NCBI nr
Match: XP_008457016.1 (PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 3.2e-68
Identity = 133/151 (88.08%), Postives = 141/151 (93.38%), Query Frame = 0


Query: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60
           MNSMLKRSTT K KKVNTNTKCNRFLVSINV+GSTGP+RFVANEDDLVCE+IKTSLTLYA
Sbjct: 1   MNSMLKRSTTNKDKKVNTNTKCNRFLVSINVLGSTGPVRFVANEDDLVCEVIKTSLTLYA 60

Query: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120
           RQ RLPILGTNVDNF L+ VNDEKRDALSPRESIGSKQVRHFLLCKKQG+ HSLLLNEK 
Sbjct: 61  RQGRLPILGTNVDNFFLYRVNDEKRDALSPRESIGSKQVRHFLLCKKQGTSHSLLLNEKT 120

Query: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 152
           SRQRE+EKG   WK+WLNKSL+YSIQSHCML
Sbjct: 121 SRQREKEKG--SWKRWLNKSLNYSIQSHCML 149

[Close]

BLAST of CsaV3_3G020860 vs. NCBI nr
Match: XP_022948336.1 (uncharacterized protein LOC111452042 [Cucurbita moschata])

HSP 1 Score: 176.4 bits (446), Expect = 7.3e-41
Identity = 91/138 (65.94%), Postives = 108/138 (78.26%), Query Frame = 0


Query: 4   MLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQA 63
           MLKRST+K       N+KCNR LVS+NV+GSTGPIRFVANEDDLVCE++KT+LT YAR A
Sbjct: 1   MLKRSTSKM-----RNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLA 60

Query: 64  RLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQ 123
           RLP LGTNVDNF+L+CVND   DALS RE+IG+KQVRHFLLCKK+G+ H+ L        
Sbjct: 61  RLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCKKEGTSHASL-------- 120

Query: 124 REEEKGRNHWKKWLNKSL 142
             +E G+N+WK WL KSL
Sbjct: 121 -PKENGKNNWKTWLTKSL 123

[Close]

BLAST of CsaV3_3G020860 vs. NCBI nr
Match: XP_023525569.1 (uncharacterized protein LOC111789142 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40
Identity = 90/138 (65.22%), Postives = 108/138 (78.26%), Query Frame = 0


Query: 4   MLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQA 63
           MLKRST+K       N+KCNR LVS+NV+GSTGPIRFVANEDDLVCE++KT+LT YAR A
Sbjct: 1   MLKRSTSKM-----RNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLA 60

Query: 64  RLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQ 123
           RLP LGTNVDNF+L+CVND   DALS RE+IG+KQVRHFLLC+K+G+ H+ L        
Sbjct: 61  RLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCRKEGTSHASL-------- 120

Query: 124 REEEKGRNHWKKWLNKSL 142
             +E G+N+WK WL KSL
Sbjct: 121 -PKENGKNNWKTWLTKSL 123

[Close]

BLAST of CsaV3_3G020860 vs. NCBI nr
Match: XP_022143314.1 (uncharacterized protein LOC111013214 [Momordica charantia])

HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40
Identity = 94/145 (64.83%), Postives = 116/145 (80.00%), Query Frame = 0


Query: 5   LKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQAR 64
           LKR+T+ K KK  T+ KC+RFL+SINV+GSTGPIRFV NEDDLVCE++KT+L  YARQAR
Sbjct: 4   LKRNTSNKSKKTITSGKCSRFLISINVLGSTGPIRFVVNEDDLVCEVMKTTLVAYARQAR 63

Query: 65  LPILGTNVDNFILFCVNDEKRDALSPRESIG-SKQVRHFLLCKKQGSPHSLLLNEK-MSR 124
           LP LGTNVDNFIL+CVND   +ALSPRE+IG SKQVRHFLLCKKQG+ H+   ++K +S 
Sbjct: 64  LPALGTNVDNFILYCVNDGV-EALSPRETIGRSKQVRHFLLCKKQGTSHAFPNDQKTLSN 123

Query: 125 QREEEKGRN-HWKKWLNKSLSYSIQ 147
           Q EEEK RN H+ +   K L+  ++
Sbjct: 124 QMEEEKRRNSHFSRQRFKVLAAELE 147

[Close]

BLAST of CsaV3_3G020860 vs. TAIR10
Match: AT1G23150.1 (unknown protein)

HSP 1 Score: 109.4 bits (272), Expect = 2.0e-24
Identity = 63/148 (42.57%), Postives = 88/148 (59.46%), Query Frame = 0


Query: 14  KKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTNVD 73
           KK N   K NR L+S+  +GS GPIRFVANE DLV  +I T+L  YAR+ RLPILG++ +
Sbjct: 5   KKKNQIVKGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPILGSDFN 64

Query: 74  NFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQREEEKGRNH- 133
           +F+ +C       ALSP E+IGS  VR+F+LCKK+             ++ EE+KGR++ 
Sbjct: 65  DFVFYCPM-VGPGALSPWEAIGSVGVRNFMLCKKKPE----------EKKVEEDKGRSNF 124

Query: 134 ------------WKKWLNKSLSYSIQSH 149
                       +K W+NKSL   + +H
Sbjct: 125 PINGARKGAGGSFKAWINKSLRLKVTTH 141

[Close]

BLAST of CsaV3_3G020860 vs. TAIR10
Match: AT1G70780.1 (unknown protein)

HSP 1 Score: 105.5 bits (262), Expect = 2.9e-23
Identity = 61/140 (43.57%), Postives = 84/140 (60.00%), Query Frame = 0


Query: 14  KKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTNVD 73
           +K N N K NR L+S+ V+GS GPIRFVA EDDLV  +I T+L  YAR+ RLP+LG++ +
Sbjct: 7   QKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLLGSDFN 66

Query: 74  NFILFC--VNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQREEEKGR- 133
           +F+L+C  V  E   ALS  ++IGS   R+F+LC+K   P    + E   R      G  
Sbjct: 67  DFLLYCPMVGPE---ALSTWDAIGSLGARNFMLCRK---PEEKKVEESNGRSDSTINGAR 126

Query: 134 --NHWKKWLNKSLSYSIQSH 149
                K W+NKS +  + SH
Sbjct: 127 KGGSLKAWINKSFNLKVSSH 140

[Close]

BLAST of CsaV3_3G020860 vs. TAIR10
Match: AT5G37730.1 (unknown protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21
Identity = 56/120 (46.67%), Postives = 74/120 (61.67%), Query Frame = 0


Query: 5   LKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQAR 64
           + R+   KG     N K    LVS+NV+GS GPIRF+ANEDD V   I T+L  YARQ R
Sbjct: 1   MNRNENVKGVMKRKNKK---LLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGR 60

Query: 65  LPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQR 124
           +P+LG +VDNFI + +N    + L P+E IGS  V +FL+CKK+  P   +   + SR R
Sbjct: 61  IPVLGFDVDNFIFYSIN-AGFNTLHPQEKIGSMDVTNFLMCKKEPRPLEKVEGIRESRAR 116

[Close]

BLAST of CsaV3_3G020860 vs. TrEMBL
Match: tr|A0A0A0L707|A0A0A0L707_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G292550 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 6.9e-80
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60
           MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA
Sbjct: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60

Query: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120
           RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM
Sbjct: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120

Query: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 152
           SRQREEEKGRNHWKKWLNKSLSYSIQSHCML
Sbjct: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 151

[Close]

BLAST of CsaV3_3G020860 vs. TrEMBL
Match: tr|A0A1S3C4I6|A0A1S3C4I6_CUCME (uncharacterized protein LOC103496795 OS=Cucumis melo OX=3656 GN=LOC103496795 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.1e-68
Identity = 133/151 (88.08%), Postives = 141/151 (93.38%), Query Frame = 0


Query: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60
           MNSMLKRSTT K KKVNTNTKCNRFLVSINV+GSTGP+RFVANEDDLVCE+IKTSLTLYA
Sbjct: 1   MNSMLKRSTTNKDKKVNTNTKCNRFLVSINVLGSTGPVRFVANEDDLVCEVIKTSLTLYA 60

Query: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120
           RQ RLPILGTNVDNF L+ VNDEKRDALSPRESIGSKQVRHFLLCKKQG+ HSLLLNEK 
Sbjct: 61  RQGRLPILGTNVDNFFLYRVNDEKRDALSPRESIGSKQVRHFLLCKKQGTSHSLLLNEKT 120

Query: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 152
           SRQRE+EKG   WK+WLNKSL+YSIQSHCML
Sbjct: 121 SRQREKEKG--SWKRWLNKSLNYSIQSHCML 149

[Close]

BLAST of CsaV3_3G020860 vs. TrEMBL
Match: tr|A0A2N9ETJ3|A0A2N9ETJ3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5995 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-28
Identity = 70/134 (52.24%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 15  KVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTNVDN 74
           K N N K NR L+SI V+GS GPIRFV NED+LV  +I T+L  YAR+ RLPILG+N++ 
Sbjct: 57  KKNQNAKANRLLISITVLGSAGPIRFVVNEDELVAAVIDTALKSYAREGRLPILGSNLNE 116

Query: 75  FILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQREEEKGRNHWK 134
           FIL+C N    DALSP ++IGS+ VR+F+LCKK   P  +  +++ S +    KG   WK
Sbjct: 117 FILYCPN-AGPDALSPWDTIGSQGVRNFMLCKKP-QPVKMAGDDETSIRPISRKGSGSWK 176

Query: 135 KWLNKSLSYSIQSH 149
            W+NKSL+  I SH
Sbjct: 177 AWINKSLNLKIYSH 188

[Close]

BLAST of CsaV3_3G020860 vs. TrEMBL
Match: tr|A0A251Q491|A0A251Q491_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G162600 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-27
Identity = 73/151 (48.34%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 3   SMLKRSTT-KKGKKVNTN----TKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLT 62
           ++L+R+T+ +K KK+N N     K NRFL+++NV+GSTGPIRFV NEDDLV  +I T+L 
Sbjct: 6   NVLERTTSQQKHKKINNNEVHSVKKNRFLITVNVVGSTGPIRFVVNEDDLVAGVIDTALK 65

Query: 63  LYARQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLN 122
            YAR+ RLP+LG++V +F+L+C N    DALSP ESIGS   R+F+L KKQ +  +  + 
Sbjct: 66  SYAREGRLPLLGSDVKDFLLYCAN-AGSDALSPWESIGSHGGRNFVLSKKQRAVQN--VT 125

Query: 123 EKMSRQREEEKGRNHWKKWLNKSLSYSIQSH 149
           E+       +   + WK WLNKS  + I SH
Sbjct: 126 ERKPEMTAPKGSVSSWKAWLNKSFPFKISSH 153

[Close]

BLAST of CsaV3_3G020860 vs. TrEMBL
Match: tr|D7T8Q4|D7T8Q4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g05250 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 69/137 (50.36%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 12  KGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTN 71
           K KK  +  K NR L+SINV+GS GPIRFV +ED+LV  +I T+L  YAR+ RLPILG++
Sbjct: 5   KQKKNQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPILGSD 64

Query: 72  VDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQREEEKGRN 131
           ++NF+L+C N    DALSP E+IGS   R+F+LCKK   P +        R     KG  
Sbjct: 65  LNNFLLYCSN-AGSDALSPWETIGSNGTRNFMLCKKP-QPQNTTEVGVEGRAGMPRKGSG 124

Query: 132 HWKKWLNKSLSYSIQSH 149
            WK W+NKSL+  I SH
Sbjct: 125 SWKAWINKSLNLKISSH 139

The following BLAST results are available for this feature:

BLAST of CsaV3_3G020860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651392.1	1.0e-79	100.00	PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus] >KGN57775.1 hy...	[more]
XP_008457016.1	3.2e-68	88.08	PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo]	[more]
XP_022948336.1	7.3e-41	65.94	uncharacterized protein LOC111452042 [Cucurbita moschata]	[more]
XP_023525569.1	1.6e-40	65.22	uncharacterized protein LOC111789142 [Cucurbita pepo subsp. pepo]	[more]
XP_022143314.1	2.1e-40	64.83	uncharacterized protein LOC111013214 [Momordica charantia]	[more]

BLAST of CsaV3_3G020860 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23150.1	2.0e-24	42.57	unknown protein	[more]
AT1G70780.1	2.9e-23	43.57	unknown protein	[more]
AT5G37730.1	1.2e-21	46.67	unknown protein	[more]

BLAST of CsaV3_3G020860 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G020860 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L707\|A0A0A0L707_CUCSA	6.9e-80	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G292550 PE=4 SV=1	[more]
tr\|A0A1S3C4I6\|A0A1S3C4I6_CUCME	2.1e-68	88.08	uncharacterized protein LOC103496795 OS=Cucumis melo OX=3656 GN=LOC103496795 PE=...	[more]
tr\|A0A2N9ETJ3\|A0A2N9ETJ3_FAGSY	1.6e-28	52.24	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5995 PE=4 SV=1	[more]
tr\|A0A251Q491\|A0A251Q491_PRUPE	1.8e-27	48.34	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G162600 PE=4 SV=1	[more]
tr\|D7T8Q4\|D7T8Q4_VITVI	1.2e-26	50.36	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g05250 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G020860.1	CsaV3_3G020860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33270	FAMILY NOT NAMED	coord: 8..148
None	No IPR available	PANTHER	PTHR33270:SF5	SUBFAMILY NOT NAMED	coord: 8..148

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G020860	CSPI03G20970	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G020860	Cucsa.031200	Cucumber (Gy14) v1	cgycucB006
CsaV3_3G020860	CsGy3G020520	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G020860	Cla013229	Watermelon (97103) v1	cucwmB245
CsaV3_3G020860	ClCG05G011590	Watermelon (Charleston Gray)	cucwcgB230
CsaV3_3G020860	Lsi05G003660	Bottle gourd (USVL1VR-Ls)	cuclsiB231
CsaV3_3G020860	MELO3C032058.2	Melon (DHL92) v3.6.1	cucmedB247
CsaV3_3G020860	Cla97C05G093650	Watermelon (97103) v2	cucwmbB212
CsaV3_3G020860	Bhi01G001482	Wax gourd	cucwgoB274

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G020860	Silver-seed gourd	carcucB0517
CsaV3_3G020860	Silver-seed gourd	carcucB0518
CsaV3_3G020860	Silver-seed gourd	carcucB0801
CsaV3_3G020860	Cucurbita maxima (Rimu)	cmacucB0281
CsaV3_3G020860	Cucurbita maxima (Rimu)	cmacucB0547
CsaV3_3G020860	Cucurbita moschata (Rifu)	cmocucB0272
CsaV3_3G020860	Cucurbita moschata (Rifu)	cmocucB0532
CsaV3_3G020860	Cucurbita pepo (Zucchini)	cpecucB0686
CsaV3_3G020860	Cucurbita pepo (Zucchini)	cpecucB0749
CsaV3_3G020860	Bottle gourd (USVL1VR-Ls)	cuclsiB225
CsaV3_3G020860	Melon (DHL92) v3.5.1	cucmeB249
CsaV3_3G020860	Watermelon (Charleston Gray)	cucwcgB241
CsaV3_3G020860	Watermelon (97103) v1	cucwmB254
CsaV3_3G020860	Watermelon (97103) v2	cucwmbB220
CsaV3_3G020860	Wax gourd	cucwgoB304
CsaV3_3G020860	Wax gourd	cucwgoB305