Csa3G292550 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G292550
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Senescence-associated protein, putative
Location	Chr3 : 16956299 .. 16956840 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAGTATGTTGAAGAGAAGCACCACAAAGAAGGGTAAGAAAGTGAATACAAATACAAAGTGTAATAGATTTTTGGTGTCTATCAATGTCATTGGGAGCACAGGACCAATTAGATTTGTGGCAAATGAAGATGATTTGGTTTGTGAGATTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAACTTTATTCTCTTTTGTGTTAACGATGAAAAAAGGGATGGTATGTCTTTCATATAACACTTCTTTTTTTAATTTTCTTTTAACATTATCAAACAACTCAATTTGCTTTCATTCTTTTTCTAACAGCTCTAAGCCCAAGGGAAAGTATAGGATCAAAGCAAGTAAGGCACTTTTTGCTATGTAAAAAGCAAGGGAGTCCACATTCATTATTGCTTAACGAGAAAATGTCAAGGCAAAGGGAAGAAGAAAAGGGGAGAAATCATTGGAAGAAATGGCTCAACAAATCATTGAGTTACAGCATTCAATCTCATTGCATGCTGTAA

mRNA sequence

ATGAATAGTATGTTGAAGAGAAGCACCACAAAGAAGGGTAAGAAAGTGAATACAAATACAAAGTGTAATAGATTTTTGGTGTCTATCAATGTCATTGGGAGCACAGGACCAATTAGATTTGTGGCAAATGAAGATGATTTGGTTTGTGAGATTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAACTTTATTCTCTTTTGTGTTAACGATGAAAAAAGGGATGCTCTAAGCCCAAGGGAAAGTATAGGATCAAAGCAAGTAAGGCACTTTTTGCTATGTAAAAAGCAAGGGAGTCCACATTCATTATTGCTTAACGAGAAAATGTCAAGGCAAAGGGAAGAAGAAAAGGGGAGAAATCATTGGAAGAAATGGCTCAACAAATCATTGAGTTACAGCATTCAATCTCATTGCATGCTGTAA

Coding sequence (CDS)

ATGAATAGTATGTTGAAGAGAAGCACCACAAAGAAGGGTAAGAAAGTGAATACAAATACAAAGTGTAATAGATTTTTGGTGTCTATCAATGTCATTGGGAGCACAGGACCAATTAGATTTGTGGCAAATGAAGATGATTTGGTTTGTGAGATTATCAAGACTTCTCTTACATTATATGCTCGTCAAGCTCGTCTTCCTATTCTTGGAACTAATGTTGATAACTTTATTCTCTTTTGTGTTAACGATGAAAAAAGGGATGCTCTAAGCCCAAGGGAAAGTATAGGATCAAAGCAAGTAAGGCACTTTTTGCTATGTAAAAAGCAAGGGAGTCCACATTCATTATTGCTTAACGAGAAAATGTCAAGGCAAAGGGAAGAAGAAAAGGGGAGAAATCATTGGAAGAAATGGCTCAACAAATCATTGAGTTACAGCATTCAATCTCATTGCATGCTGTAA

Protein sequence

MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQREEEKGRNHWKKWLNKSLSYSIQSHCML*

Homology

[Close]

BLAST of Csa3G292550 vs. TrEMBL
Match: A0A0A0L707_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G292550 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 7.6e-81
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1


Query: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60
           MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA
Sbjct: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60

Query: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120
           RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM
Sbjct: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120

Query: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 152
           SRQREEEKGRNHWKKWLNKSLSYSIQSHCML
Sbjct: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 151

[Close]

BLAST of Csa3G292550 vs. TrEMBL
Match: D7TSP8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01210 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27
Identity = 74/149 (49.66%), Postives = 95/149 (63.76%), Query Frame = 1


Query: 4   MLKRSTTKKG-KKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQ 63
           ML+R   KK  ++ N N   NRFL+S+NV+GS+GPIRFV NE DL+  +I T+L  YARQ
Sbjct: 5   MLRRRQKKKSFEEQNINGTNNRFLISVNVLGSSGPIRFVVNEGDLIAAVIDTALKSYARQ 64

Query: 64  ARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSR 123
            RLP LG++++ F+L+C N    DALSP E IGS   R+F+LCKKQ  P       +M  
Sbjct: 65  GRLPHLGSDINQFLLYCAN-VGADALSPWELIGSCGGRNFVLCKKQIEP-------QMRE 124

Query: 124 QREE---EKGRNHWKKWLNKSLSYSIQSH 149
            R E    KG   WK WLNKS ++ I SH
Sbjct: 125 TRPEMLGRKGSGSWKTWLNKSFNFKILSH 145

[Close]

BLAST of Csa3G292550 vs. TrEMBL
Match: A0A059ADI0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01592 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27
Identity = 71/149 (47.65%), Postives = 96/149 (64.43%), Query Frame = 1


Query: 3   SMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQ 62
           S+L +   KK    +  +K NRFLV++NV+GS GPIRFV  EDDLV  +I+T+L  YAR+
Sbjct: 16  SLLMQKHKKKNSSDDQGSKKNRFLVTVNVLGSAGPIRFVVKEDDLVSAVIQTALKTYARE 75

Query: 63  ARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSR 122
            RLP+LGT+V+NF+L    +   DAL+P E+IGS+  R+F+LCKKQ  P       +M+ 
Sbjct: 76  GRLPVLGTDVNNFVLHAAANS--DALNPSEAIGSQGGRNFVLCKKQIQP-------QMTE 135

Query: 123 QREE---EKGRNHWKKWLNKSLSYSIQSH 149
            R E    K    WK WLNKS S+ I S+
Sbjct: 136 ARSEMISHKRSGSWKAWLNKSFSFKIPSY 155

[Close]

BLAST of Csa3G292550 vs. TrEMBL
Match: D7T8Q4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05250 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-27
Identity = 69/137 (50.36%), Postives = 89/137 (64.96%), Query Frame = 1


Query: 12  KGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTN 71
           K KK  +  K NR L+SINV+GS GPIRFV +ED+LV  +I T+L  YAR+ RLPILG++
Sbjct: 5   KQKKNQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPILGSD 64

Query: 72  VDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQREEEKGRN 131
           ++NF+L+C N    DALSP E+IGS   R+F+LCKK   P +        R     KG  
Sbjct: 65  LNNFLLYCSN-AGSDALSPWETIGSNGTRNFMLCKKP-QPQNTTEVGVEGRAGMPRKGSG 124

Query: 132 HWKKWLNKSLSYSIQSH 149
            WK W+NKSL+  I SH
Sbjct: 125 SWKAWINKSLNLKISSH 139

[Close]

BLAST of Csa3G292550 vs. TrEMBL
Match: A0A059AE78_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01593 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-26
Identity = 71/136 (52.21%), Postives = 89/136 (65.44%), Query Frame = 1


Query: 11  KKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGT 70
           KK    N +T  NRFLV INV+GSTGPIRFV  +DDLV  +I+T+L  YAR+ RLP+LGT
Sbjct: 16  KKNSDDNQSTNKNRFLVIINVLGSTGPIRFVVKKDDLVSGVIQTALKTYAREGRLPVLGT 75

Query: 71  NVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQREE---E 130
           +V+NFIL    D    AL P E+IGS++ R+F+LCKKQ  P       +M+  R E    
Sbjct: 76  DVNNFILHDAADYA--ALHPAEAIGSREGRNFVLCKKQIQP-------QMTEARSEMISR 135

Query: 131 KGRNHWKKWLNKSLSY 144
           KG   WK WLNKS S+
Sbjct: 136 KGSGSWKAWLNKSFSF 142

[Close]

BLAST of Csa3G292550 vs. TAIR10
Match: AT1G23150.1 (AT1G23150.1 unknown protein)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24
Identity = 63/148 (42.57%), Postives = 87/148 (58.78%), Query Frame = 1


Query: 14  KKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTNVD 73
           KK N   K NR L+S+  +GS GPIRFVANE DLV  +I T+L  YAR+ RLPILG++ +
Sbjct: 5   KKKNQIVKGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPILGSDFN 64

Query: 74  NFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQREEEKGRNH- 133
           +F+ +C       ALSP E+IGS  VR+F+LCKK+             ++ EE+KGR++ 
Sbjct: 65  DFVFYCPM-VGPGALSPWEAIGSVGVRNFMLCKKKPE----------EKKVEEDKGRSNF 124

Query: 134 ------------WKKWLNKSLSYSIQSH 149
                       +K W+NKSL   + +H
Sbjct: 125 PINGARKGAGGSFKAWINKSLRLKVTTH 141

[Close]

BLAST of Csa3G292550 vs. TAIR10
Match: AT1G70780.1 (AT1G70780.1 unknown protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23
Identity = 61/140 (43.57%), Postives = 82/140 (58.57%), Query Frame = 1


Query: 14  KKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQARLPILGTNVD 73
           +K N N K NR L+S+ V+GS GPIRFVA EDDLV  +I T+L  YAR+ RLP+LG++ +
Sbjct: 7   QKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLLGSDFN 66

Query: 74  NFILFC--VNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQREEEKGR- 133
           +F+L+C  V  E   ALS  ++IGS   R+F+LC+K   P    + E   R      G  
Sbjct: 67  DFLLYCPMVGPE---ALSTWDAIGSLGARNFMLCRK---PEEKKVEESNGRSDSTINGAR 126

Query: 134 --NHWKKWLNKSLSYSIQSH 149
                K W+NKS +  + SH
Sbjct: 127 KGGSLKAWINKSFNLKVSSH 140

[Close]

BLAST of Csa3G292550 vs. TAIR10
Match: AT5G37730.1 (AT5G37730.1 unknown protein)

HSP 1 Score: 100.9 bits (250), Expect = 7.1e-22
Identity = 56/120 (46.67%), Postives = 72/120 (60.00%), Query Frame = 1


Query: 5   LKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQAR 64
           + R+   KG     N K    LVS+NV+GS GPIRF+ANEDD V   I T+L  YARQ R
Sbjct: 1   MNRNENVKGVMKRKNKK---LLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGR 60

Query: 65  LPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQR 124
           +P+LG +VDNFI + +N    + L P+E IGS  V +FL+CKK+  P   +   + SR R
Sbjct: 61  IPVLGFDVDNFIFYSIN-AGFNTLHPQEKIGSMDVTNFLMCKKEPRPLEKVEGIRESRAR 116

[Close]

BLAST of Csa3G292550 vs. NCBI nr
Match: gi|778680754|ref|XP_011651392.1| (PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 1.1e-80
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1


Query: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60
           MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA
Sbjct: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60

Query: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120
           RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM
Sbjct: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120

Query: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 152
           SRQREEEKGRNHWKKWLNKSLSYSIQSHCML
Sbjct: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 151

[Close]

BLAST of Csa3G292550 vs. NCBI nr
Match: gi|659114330|ref|XP_008457016.1| (PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 3.3e-69
Identity = 133/151 (88.08%), Postives = 141/151 (93.38%), Query Frame = 1


Query: 1   MNSMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYA 60
           MNSMLKRSTT K KKVNTNTKCNRFLVSINV+GSTGP+RFVANEDDLVCE+IKTSLTLYA
Sbjct: 1   MNSMLKRSTTNKDKKVNTNTKCNRFLVSINVLGSTGPVRFVANEDDLVCEVIKTSLTLYA 60

Query: 61  RQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKM 120
           RQ RLPILGTNVDNF L+ VNDEKRDALSPRESIGSKQVRHFLLCKKQG+ HSLLLNEK 
Sbjct: 61  RQGRLPILGTNVDNFFLYRVNDEKRDALSPRESIGSKQVRHFLLCKKQGTSHSLLLNEKT 120

Query: 121 SRQREEEKGRNHWKKWLNKSLSYSIQSHCML 152
           SRQRE+EKG   WK+WLNKSL+YSIQSHCML
Sbjct: 121 SRQREKEKG--SWKRWLNKSLNYSIQSHCML 149

[Close]

BLAST of Csa3G292550 vs. NCBI nr
Match: gi|658015440|ref|XP_008343057.1| (PREDICTED: uncharacterized protein LOC103405829 [Malus domestica])

HSP 1 Score: 132.1 bits (331), Expect = 8.1e-28
Identity = 70/149 (46.98%), Postives = 98/149 (65.77%), Query Frame = 1


Query: 4   MLKRSTTKKGKKVNTNT----KCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLY 63
           +L+R   +K KK +T+     K NRFL+++NV+GS GPIRFV NEDDLV  +I T+L  Y
Sbjct: 6   VLERINLQKHKKTSTDATHTVKTNRFLITVNVLGSAGPIRFVVNEDDLVARVIDTALKSY 65

Query: 64  ARQARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEK 123
           AR+ RLP+LG++V +F+L C N    DALSP E+IGS+  R+F+L KKQ    +  + E+
Sbjct: 66  AREGRLPVLGSDVKDFLLHCAN-AGSDALSPWETIGSRGGRNFVLSKKQKQVQNNNIAER 125

Query: 124 MSRQREEEKGRNHWKKWLNKSLSYSIQSH 149
            S     +   + WK WLNKS ++ I SH
Sbjct: 126 KSEITAPKGTVSSWKAWLNKSFTFKISSH 153

[Close]

BLAST of Csa3G292550 vs. NCBI nr
Match: gi|702479021|ref|XP_010032694.1| (PREDICTED: uncharacterized protein At4g22758-like [Eucalyptus grandis])

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27
Identity = 71/149 (47.65%), Postives = 96/149 (64.43%), Query Frame = 1


Query: 3   SMLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQ 62
           S+L +   KK    +  +K NRFLV++NV+GS GPIRFV  EDDLV  +I+T+L  YAR+
Sbjct: 16  SLLMQKHKKKNSSDDQGSKKNRFLVTVNVLGSAGPIRFVVKEDDLVSAVIQTALKTYARE 75

Query: 63  ARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSR 122
            RLP+LGT+V+NF+L    +   DAL+P E+IGS+  R+F+LCKKQ  P       +M+ 
Sbjct: 76  GRLPVLGTDVNNFVLHAAANS--DALNPSEAIGSQGGRNFVLCKKQIQP-------QMTE 135

Query: 123 QREE---EKGRNHWKKWLNKSLSYSIQSH 149
            R E    K    WK WLNKS S+ I S+
Sbjct: 136 ARSEMISHKRSGSWKAWLNKSFSFKIPSY 155

[Close]

BLAST of Csa3G292550 vs. NCBI nr
Match: gi|296087146|emb|CBI33520.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27
Identity = 74/149 (49.66%), Postives = 95/149 (63.76%), Query Frame = 1


Query: 4   MLKRSTTKKG-KKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQ 63
           ML+R   KK  ++ N N   NRFL+S+NV+GS+GPIRFV NE DL+  +I T+L  YARQ
Sbjct: 5   MLRRRQKKKSFEEQNINGTNNRFLISVNVLGSSGPIRFVVNEGDLIAAVIDTALKSYARQ 64

Query: 64  ARLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSR 123
            RLP LG++++ F+L+C N    DALSP E IGS   R+F+LCKKQ  P       +M  
Sbjct: 65  GRLPHLGSDINQFLLYCAN-VGADALSPWELIGSCGGRNFVLCKKQIEP-------QMRE 124

Query: 124 QREE---EKGRNHWKKWLNKSLSYSIQSH 149
            R E    KG   WK WLNKS ++ I SH
Sbjct: 125 TRPEMLGRKGSGSWKTWLNKSFNFKILSH 145

The following BLAST results are available for this feature:

BLAST of Csa3G292550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L707_CUCSA	7.6e-81	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G292550 PE=4 SV=1	[more]
D7TSP8_VITVI	1.3e-27	49.66	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01210 PE=4 SV=...	[more]
A0A059ADI0_EUCGR	1.3e-27	47.65	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01592 PE=4 SV=1	[more]
D7T8Q4_VITVI	2.8e-27	50.36	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05250 PE=4 SV=...	[more]
A0A059AE78_EUCGR	1.4e-26	52.21	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01593 PE=4 SV=1	[more]

BLAST of Csa3G292550 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23150.1	1.2e-24	42.57	unknown protein	[more]
AT1G70780.1	1.7e-23	43.57	unknown protein	[more]
AT5G37730.1	7.1e-22	46.67	unknown protein	[more]

BLAST of Csa3G292550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680754\|ref\|XP_011651392.1\|	1.1e-80	100.00	PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus]	[more]
gi\|659114330\|ref\|XP_008457016.1\|	3.3e-69	88.08	PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo]	[more]
gi\|658015440\|ref\|XP_008343057.1\|	8.1e-28	46.98	PREDICTED: uncharacterized protein LOC103405829 [Malus domestica]	[more]
gi\|702479021\|ref\|XP_010032694.1\|	1.8e-27	47.65	PREDICTED: uncharacterized protein At4g22758-like [Eucalyptus grandis]	[more]
gi\|296087146\|emb\|CBI33520.3\|	1.8e-27	49.66	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G292550.1	Csa3G292550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33270	FAMILY NOT NAMED	coord: 1..148 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G292550	Cla013229	Watermelon (97103) v1	cuwmB239
Csa3G292550	ClCG05G011590	Watermelon (Charleston Gray)	cuwcgB226
Csa3G292550	Lsi05G003660	Bottle gourd (USVL1VR-Ls)	culsiB212
Csa3G292550	MELO3C032058.2	Melon (DHL92) v3.6.1	cumedB239
Csa3G292550	Cla97C05G093650	Watermelon (97103) v2	cuwmbB209
Csa3G292550	Bhi01G001482	Wax gourd	cuwgoB271
Csa3G292550	CSPI03G20970	Wild cucumber (PI 183967)	cpicuB120
Csa3G292550	Cucsa.031200	Cucumber (Gy14) v1	cgycuB003
Csa3G292550	Cp4.1LG02g17000	Cucurbita pepo (Zucchini)	cpecuB547
Csa3G292550	CsGy3G020520	Cucumber (Gy14) v2	cgybcuB109

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G292550	Watermelon (97103) v2	cuwmbB218
Csa3G292550	Wax gourd	cuwgoB300
Csa3G292550	Cucurbita maxima (Rimu)	cmacuB242
Csa3G292550	Cucurbita maxima (Rimu)	cmacuB455
Csa3G292550	Cucurbita moschata (Rifu)	cmocuB229
Csa3G292550	Cucurbita moschata (Rifu)	cmocuB442
Csa3G292550	Melon (DHL92) v3.5.1	cumeB246
Csa3G292550	Watermelon (Charleston Gray)	cuwcgB233
Csa3G292550	Watermelon (97103) v1	cuwmB245
Csa3G292550	Cucurbita pepo (Zucchini)	cpecuB600
Csa3G292550	Bottle gourd (USVL1VR-Ls)	culsiB206
Csa3G292550	Silver-seed gourd	carcuB0513
Csa3G292550	Silver-seed gourd	carcuB0780