Carg07462 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07462
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Senescence-associated protein
Location	Cucurbita_argyrosperma_scaffold_019 : 991467 .. 991934 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGAGAAGCACGTCAAAGATGAGAAATTCAAAGTGTAATAAAATTTTGGTGTCCGTCAATGTGGTTGGGAGCACAGGACCTATTAGGTTCGTGGCAAATGAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTATATCATATGCTCGCCTTGCTCGTCTACCTACTCTCGGAACTAACGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGGTAGGTCTCATAAACCCTTTCTTTAAATTCTTAGTCACCAAAGAACTTATTTTTTTTTCCGTTCTTCAGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACATGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACGTGGCTGACCAAGTCTTTACATACAACGTACAATATTGTTGCACGTTGA

mRNA sequence

ATGTTGAAGAGAAGCACGTCAAAGATGAGAAATTCAAAGTGTAATAAAATTTTGGTGTCCGTCAATGTGGTTGGGAGCACAGGACCTATTAGGTTCGTGGCAAATGAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTATATCATATGCTCGCCTTGCTCGTCTACCTACTCTCGGAACTAACGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACATGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACGTGGCTGACCAAGTCTTTACATACAACGTACAATATTGTTGCACGTTGA

Coding sequence (CDS)

ATGTTGAAGAGAAGCACGTCAAAGATGAGAAATTCAAAGTGTAATAAAATTTTGGTGTCCGTCAATGTGGTTGGGAGCACAGGACCTATTAGGTTCGTGGCAAATGAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTATATCATATGCTCGCCTTGCTCGTCTACCTACTCTCGGAACTAACGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACATGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACGTGGCTGACCAAGTCTTTACATACAACGTACAATATTGTTGCACGTTGA

Protein sequence

MLKRSTSKMRNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSHASLPKENGKNNWKTWLTKSLHTTYNIVAR

Homology

[Close]

BLAST of Carg07462 vs. NCBI nr
Match: XP_022948336.1 (uncharacterized protein LOC111452042 [Cucurbita moschata])

HSP 1 Score: 260.8 bits (665), Expect = 2.6e-66
Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MLKRSTSKMRNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTL 60
           MLKRSTSKMRNSKCN+ILVSVNVVGSTGPIRFVANEDDLVCEVMKTTL SYARLARLPTL
Sbjct: 1   MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTL 60

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSHASLPKENGKNNWKTWLT 120
           GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSHASLPKENGKNNWKTWLT
Sbjct: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSHASLPKENGKNNWKTWLT 120

Query: 121 KSLHTTYNIVAR 133
           KSL TTYNI+AR
Sbjct: 121 KSLLTTYNIIAR 132

[Close]

BLAST of Carg07462 vs. NCBI nr
Match: XP_023525569.1 (uncharacterized protein LOC111789142 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 259.6 bits (662), Expect = 5.7e-66
Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MLKRSTSKMRNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTL 60
           MLKRSTSKMRNSKCN+ILVSVNVVGSTGPIRFVANEDDLVCEVMKTTL SYARLARLPTL
Sbjct: 1   MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTL 60

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSHASLPKENGKNNWKTWLT 120
           GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLC+KEGTSHASLPKENGKNNWKTWLT
Sbjct: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCRKEGTSHASLPKENGKNNWKTWLT 120

Query: 121 KSLHTTYNIVAR 133
           KSL TTYNI+AR
Sbjct: 121 KSLLTTYNIIAR 132

[Close]

BLAST of Carg07462 vs. NCBI nr
Match: XP_022998111.1 (uncharacterized protein LOC111492858 [Cucurbita maxima])

HSP 1 Score: 250.8 bits (639), Expect = 2.7e-63
Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MLKRSTSKMRNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTL 60
           MLKRS S+MRNSKCN+ILVSVNVVGSTGPIRFVAN+DDLVCEVMKTTL SYARLARLP L
Sbjct: 1   MLKRSASQMRNSKCNRILVSVNVVGSTGPIRFVANKDDLVCEVMKTTLTSYARLARLPNL 60

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSHASLPKENGKNNWKTWLT 120
           GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTS ASLPKENGKNNWKTWLT
Sbjct: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSRASLPKENGKNNWKTWLT 120

Query: 121 KSLHTTYNIVAR 133
           KSL TTYNI+AR
Sbjct: 121 KSLLTTYNIIAR 132

[Close]

BLAST of Carg07462 vs. NCBI nr
Match: XP_011651392.1 (PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus] >KGN57775.1 hypothetical protein Csa_3G292550 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 3.2e-40
Identity = 89/138 (64.49%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 1   MLKRSTSKM-----RNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLA 60
           MLKRST+K       N+KCN+ LVS+NV+GSTGPIRFVANEDDLVCE++KT+L  YAR A
Sbjct: 4   MLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQA 63

Query: 61  RLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCKKEGTSHASL-------- 120
           RLP LGTNVDNF+L+CVND   DALS RE+IG+KQVRHFLLCKK+G+ H+ L        
Sbjct: 64  RLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQ 123

Query: 121 -PKENGKNNWKTWLTKSL 124
             +E G+N+WK WL KSL
Sbjct: 124 REEEKGRNHWKKWLNKSL 141

[Close]

BLAST of Carg07462 vs. NCBI nr
Match: XP_008457016.1 (PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 8.6e-38
Identity = 88/137 (64.23%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MLKRSTSKM-----RNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLA 60
           MLKRST+        N+KCN+ LVS+NV+GSTGP+RFVANEDDLVCEV+KT+L  YAR  
Sbjct: 4   MLKRSTTNKDKKVNTNTKCNRFLVSINVLGSTGPVRFVANEDDLVCEVIKTSLTLYARQG 63

Query: 61  RLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCKKEGTSHA-------SLP 120
           RLP LGTNVDNF LY VND   DALS RE+IG+KQVRHFLLCKK+GTSH+       S  
Sbjct: 64  RLPILGTNVDNFFLYRVNDEKRDALSPRESIGSKQVRHFLLCKKQGTSHSLLLNEKTSRQ 123

Query: 121 KENGKNNWKTWLTKSLH 125
           +E  K +WK WL KSL+
Sbjct: 124 REKEKGSWKRWLNKSLN 140

[Close]

BLAST of Carg07462 vs. TAIR10
Match: AT1G70780.1 (unknown protein)

HSP 1 Score: 104.4 bits (259), Expect = 5.6e-23
Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 1   MLKRSTSKMRNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTL 60
           +L     K +N+K N+IL+SV V+GS GPIRFVA EDDLV  V+ T L  YAR  RLP L
Sbjct: 2   LLYNKQKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLL 61

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK---------EGTSHASLPKENG 120
           G++ ++F+LYC   G +ALS  +AIG+   R+F+LC+K          G S +++     
Sbjct: 62  GSDFNDFLLYCPMVGPEALSTWDAIGSLGARNFMLCRKPEEKKVEESNGRSDSTINGARK 121

Query: 121 KNNWKTWLTKSLH 125
             + K W+ KS +
Sbjct: 122 GGSLKAWINKSFN 134

[Close]

BLAST of Carg07462 vs. TAIR10
Match: AT5G37730.1 (unknown protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.2e-22
Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 13  KCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTLGTNVDNFVLYCV 72
           K  K+LVSVNV+GS GPIRF+ANEDD V   + TTL +YAR  R+P LG +VDNF+ Y +
Sbjct: 14  KNKKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVLGFDVDNFIFYSI 73

Query: 73  NDGMDALSLREAIGAKQVRHFLLCKKE 100
           N G + L  +E IG+  V +FL+CKKE
Sbjct: 74  NAGFNTLHPQEKIGSMDVTNFLMCKKE 100

[Close]

BLAST of Carg07462 vs. TAIR10
Match: AT1G23150.1 (unknown protein)

HSP 1 Score: 100.9 bits (250), Expect = 6.2e-22
Identity = 57/124 (45.97%), Postives = 76/124 (61.29%), Query Frame = 0


Query: 13  KCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTLGTNVDNFVLYCV 72
           K N+IL+SV  +GS GPIRFVANE DLV  V+ T L  YAR  RLP LG++ ++FV YC 
Sbjct: 12  KGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPILGSDFNDFVFYCP 71

Query: 73  NDGMDALSLREAIGAKQVRHFLLCKKEGTSHASLPKENGKNN-------------WKTWL 124
             G  ALS  EAIG+  VR+F+LCKK+      + ++ G++N             +K W+
Sbjct: 72  MVGPGALSPWEAIGSVGVRNFMLCKKK-PEEKKVEEDKGRSNFPINGARKGAGGSFKAWI 131

[Close]

BLAST of Carg07462 vs. TAIR10
Match: AT4G22758.1 (unknown protein)

HSP 1 Score: 41.2 bits (95), Expect = 5.8e-04
Identity = 27/83 (32.53%), Postives = 40/83 (48.19%), Query Frame = 0


Query: 16  KILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTLGTNVDNFVLYCVNDG 75
           K+++SV V GS GP+R +      V E +K  +  Y +  R P L  +   F L+  +  
Sbjct: 123 KVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDRD-SAFELHQSHFS 182

Query: 76  MDALSLREAIGAKQVRHFLLCKK 99
           +  L  RE IG    R F + KK
Sbjct: 183 IQCLEKREIIGELGSRSFYMRKK 204

[Close]

BLAST of Carg07462 vs. TrEMBL
Match: tr|A0A0A0L707|A0A0A0L707_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G292550 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-40
Identity = 89/138 (64.49%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 1   MLKRSTSKM-----RNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLA 60
           MLKRST+K       N+KCN+ LVS+NV+GSTGPIRFVANEDDLVCE++KT+L  YAR A
Sbjct: 4   MLKRSTTKKGKKVNTNTKCNRFLVSINVIGSTGPIRFVANEDDLVCEIIKTSLTLYARQA 63

Query: 61  RLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCKKEGTSHASL-------- 120
           RLP LGTNVDNF+L+CVND   DALS RE+IG+KQVRHFLLCKK+G+ H+ L        
Sbjct: 64  RLPILGTNVDNFILFCVNDEKRDALSPRESIGSKQVRHFLLCKKQGSPHSLLLNEKMSRQ 123

Query: 121 -PKENGKNNWKTWLTKSL 124
             +E G+N+WK WL KSL
Sbjct: 124 REEEKGRNHWKKWLNKSL 141

[Close]

BLAST of Carg07462 vs. TrEMBL
Match: tr|A0A1S3C4I6|A0A1S3C4I6_CUCME (uncharacterized protein LOC103496795 OS=Cucumis melo OX=3656 GN=LOC103496795 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.7e-38
Identity = 88/137 (64.23%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MLKRSTSKM-----RNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLA 60
           MLKRST+        N+KCN+ LVS+NV+GSTGP+RFVANEDDLVCEV+KT+L  YAR  
Sbjct: 4   MLKRSTTNKDKKVNTNTKCNRFLVSINVLGSTGPVRFVANEDDLVCEVIKTSLTLYARQG 63

Query: 61  RLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFLLCKKEGTSHA-------SLP 120
           RLP LGTNVDNF LY VND   DALS RE+IG+KQVRHFLLCKK+GTSH+       S  
Sbjct: 64  RLPILGTNVDNFFLYRVNDEKRDALSPRESIGSKQVRHFLLCKKQGTSHSLLLNEKTSRQ 123

Query: 121 KENGKNNWKTWLTKSLH 125
           +E  K +WK WL KSL+
Sbjct: 124 REKEKGSWKRWLNKSLN 140

[Close]

BLAST of Carg07462 vs. TrEMBL
Match: tr|A0A1L6C343|A0A1L6C343_CARPA (Senescence-associated protein OS=Carica papaya OX=3649 GN=SSA PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.5e-25
Identity = 60/132 (45.45%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 1   MLKRSTSKMRNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTL 60
           +L     K +N+K N++L+S+NV+GS GPIRFV +E++LV  V+ T L SYAR  RLP L
Sbjct: 2   LLYNKQKKNQNAKGNRLLISINVLGSAGPIRFVVSEEELVAAVIDTALKSYAREGRLPIL 61

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK--------EGTSHASLPKENGK 120
           G+++++F+LYC N G +ALS  +AIG+   R+F+LCKK        +G S A++    G 
Sbjct: 62  GSDLNDFLLYCPNAGSEALSPWDAIGSHGARNFMLCKKPQTQKLEDDGRSSAAITSRKGA 121

Query: 121 NNWKTWLTKSLH 125
            +WK+W+ KSL+
Sbjct: 122 GSWKSWINKSLN 133

[Close]

BLAST of Carg07462 vs. TrEMBL
Match: tr|A0A2N9ETJ3|A0A2N9ETJ3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5995 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.2e-25
Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 1   MLKRSTSKMRNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTL 60
           ML     K +N+K N++L+S+ V+GS GPIRFV NED+LV  V+ T L SYAR  RLP L
Sbjct: 51  MLLYKPKKNQNAKANRLLISITVLGSAGPIRFVVNEDELVAAVIDTALKSYAREGRLPIL 110

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK------EGTSHASLP--KENGK 120
           G+N++ F+LYC N G DALS  + IG++ VR+F+LCKK       G    S+      G 
Sbjct: 111 GSNLNEFILYCPNAGPDALSPWDTIGSQGVRNFMLCKKPQPVKMAGDDETSIRPISRKGS 170

Query: 121 NNWKTWLTKSLH 125
            +WK W+ KSL+
Sbjct: 171 GSWKAWINKSLN 182

[Close]

BLAST of Carg07462 vs. TrEMBL
Match: tr|A0A2I4E5Q7|A0A2I4E5Q7_9ROSI (uncharacterized protein At4g22758-like OS=Juglans regia OX=51240 GN=LOC108986543 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 63/132 (47.73%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 1   MLKRSTSKMRNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTL 60
           ML     K +N+K N++L+S+ V+GS GPIRFV NE +LV  V+ T L SYAR  RLP L
Sbjct: 1   MLLYKPKKNQNAKGNRLLISITVLGSAGPIRFVVNEHELVGSVIDTALKSYAREGRLPVL 60

Query: 61  GTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK--------EGTSHASLPKENGK 120
           GTN+DNF LYC N G DALS  + IG++  R+F+LCKK        +G+S  ++ ++ G 
Sbjct: 61  GTNLDNFFLYCPNAGPDALSPWDTIGSQGARNFMLCKKPQPVKTADDGSSIPAMTRK-GN 120

Query: 121 NNWKTWLTKSLH 125
            +W+ W+ KSL+
Sbjct: 121 GSWRAWINKSLN 131

The following BLAST results are available for this feature:

BLAST of Carg07462 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948336.1	2.6e-66	96.97	uncharacterized protein LOC111452042 [Cucurbita moschata]	[more]
XP_023525569.1	5.7e-66	96.21	uncharacterized protein LOC111789142 [Cucurbita pepo subsp. pepo]	[more]
XP_022998111.1	2.7e-63	93.18	uncharacterized protein LOC111492858 [Cucurbita maxima]	[more]
XP_011651392.1	3.2e-40	64.49	PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus] >KGN57775.1 hy...	[more]
XP_008457016.1	8.6e-38	64.23	PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo]	[more]

BLAST of Carg07462 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70780.1	5.6e-23	42.86	unknown protein	[more]
AT5G37730.1	1.2e-22	56.32	unknown protein	[more]
AT1G23150.1	6.2e-22	45.97	unknown protein	[more]
AT4G22758.1	5.8e-04	32.53	unknown protein	[more]

BLAST of Carg07462 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg07462 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L707\|A0A0A0L707_CUCSA	2.1e-40	64.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G292550 PE=4 SV=1	[more]
tr\|A0A1S3C4I6\|A0A1S3C4I6_CUCME	5.7e-38	64.23	uncharacterized protein LOC103496795 OS=Cucumis melo OX=3656 GN=LOC103496795 PE=...	[more]
tr\|A0A1L6C343\|A0A1L6C343_CARPA	5.5e-25	45.45	Senescence-associated protein OS=Carica papaya OX=3649 GN=SSA PE=2 SV=1	[more]
tr\|A0A2N9ETJ3\|A0A2N9ETJ3_FAGSY	7.2e-25	47.73	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5995 PE=4 SV=1	[more]
tr\|A0A2I4E5Q7\|A0A2I4E5Q7_9ROSI	1.2e-24	47.73	uncharacterized protein At4g22758-like OS=Juglans regia OX=51240 GN=LOC108986543...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07462-RA	Carg07462-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33270:SF5	SUBFAMILY NOT NAMED	coord: 7..124
None	No IPR available	PANTHER	PTHR33270	FAMILY NOT NAMED	coord: 7..124

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07462	Cla013229	Watermelon (97103) v1	carwmB0760
Carg07462	ClCG05G011590	Watermelon (Charleston Gray)	carwcgB0739
Carg07462	CmaCh01G003780	Cucurbita maxima (Rimu)	carcmaB1059
Carg07462	CmoCh01G003950	Cucurbita moschata (Rifu)	carcmoB1033
Carg07462	Lsi05G003660	Bottle gourd (USVL1VR-Ls)	carlsiB700
Carg07462	Cp4.1LG02g17000	Cucurbita pepo (Zucchini)	carcpeB1072
Carg07462	Cla97C05G093650	Watermelon (97103) v2	carwmbB0795
Carg07462	Bhi01G001482	Wax gourd	carwgoB0896

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07462	Silver-seed gourd	carcarB471
Carg07462	Cucumber (Gy14) v2	carcgybB0757
Carg07462	Cucumber (Gy14) v1	carcgyB0854
Carg07462	Cucurbita maxima (Rimu)	carcmaB1057
Carg07462	Cucurbita moschata (Rifu)	carcmoB1031
Carg07462	Cucurbita pepo (Zucchini)	carcpeB1073
Carg07462	Wild cucumber (PI 183967)	carcpiB0798
Carg07462	Cucumber (Chinese Long) v2	carcuB0780
Carg07462	Cucumber (Chinese Long) v3	carcucB0801
Carg07462	Melon (DHL92) v3.5.1	carmeB0756
Carg07462	Melon (DHL92) v3.5.1	carmeB0757
Carg07462	Melon (DHL92) v3.6.1	carmedB0771