Carg07462-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAAGAGAAGCACGTCAAAGATGAGAAATTCAAAGTGTAATAAAATTTTGGTGTCCGTCAATGTGGTTGGGAGCACAGGACCTATTAGGTTCGTGGCAAATGAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTATATCATATGCTCGCCTTGCTCGTCTACCTACTCTCGGAACTAACGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGGTAGGTCTCATAAACCCTTTCTTTAAATTCTTAGTCACCAAAGAACTTATTTTTTTTTCCGTTCTTCAGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACATGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACGTGGCTGACCAAGTCTTTACATACAACGTACAATATTGTTGCACGTTGA ATGTTGAAGAGAAGCACGTCAAAGATGAGAAATTCAAAGTGTAATAAAATTTTGGTGTCCGTCAATGTGGTTGGGAGCACAGGACCTATTAGGTTCGTGGCAAATGAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTATATCATATGCTCGCCTTGCTCGTCTACCTACTCTCGGAACTAACGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACATGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACGTGGCTGACCAAGTCTTTACATACAACGTACAATATTGTTGCACGTTGA ATGTTGAAGAGAAGCACGTCAAAGATGAGAAATTCAAAGTGTAATAAAATTTTGGTGTCCGTCAATGTGGTTGGGAGCACAGGACCTATTAGGTTCGTGGCAAATGAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTATATCATATGCTCGCCTTGCTCGTCTACCTACTCTCGGAACTAACGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACATGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACGTGGCTGACCAAGTCTTTACATACAACGTACAATATTGTTGCACGTTGA MLKRSTSKMRNSKCNKILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLISYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSHASLPKENGKNNWKTWLTKSLHTTYNIVAR
BLAST of Carg07462-RA vs. NCBI nr
Match: XP_022948336.1 (uncharacterized protein LOC111452042 [Cucurbita moschata]) HSP 1 Score: 260.8 bits (665), Expect = 2.6e-66 Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg07462-RA vs. NCBI nr
Match: XP_023525569.1 (uncharacterized protein LOC111789142 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 259.6 bits (662), Expect = 5.7e-66 Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg07462-RA vs. NCBI nr
Match: XP_022998111.1 (uncharacterized protein LOC111492858 [Cucurbita maxima]) HSP 1 Score: 250.8 bits (639), Expect = 2.7e-63 Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0
BLAST of Carg07462-RA vs. NCBI nr
Match: XP_011651392.1 (PREDICTED: uncharacterized protein LOC105434881 [Cucumis sativus] >KGN57775.1 hypothetical protein Csa_3G292550 [Cucumis sativus]) HSP 1 Score: 174.1 bits (440), Expect = 3.2e-40 Identity = 89/138 (64.49%), Postives = 107/138 (77.54%), Query Frame = 0
BLAST of Carg07462-RA vs. NCBI nr
Match: XP_008457016.1 (PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo]) HSP 1 Score: 166.0 bits (419), Expect = 8.6e-38 Identity = 88/137 (64.23%), Postives = 103/137 (75.18%), Query Frame = 0
BLAST of Carg07462-RA vs. TAIR10
Match: AT1G70780.1 (unknown protein) HSP 1 Score: 104.4 bits (259), Expect = 5.6e-23 Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = 0
BLAST of Carg07462-RA vs. TAIR10
Match: AT5G37730.1 (unknown protein) HSP 1 Score: 103.2 bits (256), Expect = 1.2e-22 Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of Carg07462-RA vs. TAIR10
Match: AT1G23150.1 (unknown protein) HSP 1 Score: 100.9 bits (250), Expect = 6.2e-22 Identity = 57/124 (45.97%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of Carg07462-RA vs. TAIR10
Match: AT4G22758.1 (unknown protein) HSP 1 Score: 41.2 bits (95), Expect = 5.8e-04 Identity = 27/83 (32.53%), Postives = 40/83 (48.19%), Query Frame = 0
BLAST of Carg07462-RA vs. TrEMBL
Match: tr|A0A0A0L707|A0A0A0L707_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G292550 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.1e-40 Identity = 89/138 (64.49%), Postives = 107/138 (77.54%), Query Frame = 0
BLAST of Carg07462-RA vs. TrEMBL
Match: tr|A0A1S3C4I6|A0A1S3C4I6_CUCME (uncharacterized protein LOC103496795 OS=Cucumis melo OX=3656 GN=LOC103496795 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 5.7e-38 Identity = 88/137 (64.23%), Postives = 103/137 (75.18%), Query Frame = 0
BLAST of Carg07462-RA vs. TrEMBL
Match: tr|A0A1L6C343|A0A1L6C343_CARPA (Senescence-associated protein OS=Carica papaya OX=3649 GN=SSA PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 5.5e-25 Identity = 60/132 (45.45%), Postives = 90/132 (68.18%), Query Frame = 0
BLAST of Carg07462-RA vs. TrEMBL
Match: tr|A0A2N9ETJ3|A0A2N9ETJ3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5995 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 7.2e-25 Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 0
BLAST of Carg07462-RA vs. TrEMBL
Match: tr|A0A2I4E5Q7|A0A2I4E5Q7_9ROSI (uncharacterized protein At4g22758-like OS=Juglans regia OX=51240 GN=LOC108986543 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24 Identity = 63/132 (47.73%), Postives = 88/132 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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