Cla97C10G192670 (gene) Watermelon (97103) v2

Overview
NameCla97C10G192670
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr10 : 20500666 .. 20502361 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGATAATTAGACTTCTTGGACCAACTCATGAGGCAAGTAGTTTTAGGCGAAAATAAATCGAGGACGACGAGCTAGATTAACTTAATACTATATCGATTGTATTAAATTATAAGGATGCTGAAGAACTTTGCATTTCTTTCTACGTTTCTCTCTTTGGCCATTTGCAAAACAAAGCTAAATCATAGCTTTGTGTGTATAATTGTGAAGAATGTTGTTTTGCTTTGGCCAAATGGTTTAAACAATTTGAAGGAAACAAAGGTCTAGAAACCTTTTATCCCTTTACAATTTCAAAGGGCATAGCCAATTGTTTCAAGGCATTTATGAGAAACAAGTTAGATATATCAACCCCTCAAACAATAAATTATGGCTAAGCTGGGAGGATATCAAAGAAAGTTTGCCAAATGAAAATTTTTATCTTAGAAGGGGGGTCAAGGTCTATCTATATAGAAGATCTAGAGAATGAGGTCCTTCATATACATCTTGATTCGTGTAAACACGTGCCATAGAGAAATTATTTGAGAGGCAAAAACAATGTGGCTGGTAGTTTTATACTACCAAATGCATGGGTAGAATTTTAGTACTGTATTTTGAACTTATATCAACTGGTTATTAAAGGTAGACATATGTTGATTGTTCGGGGAATATAGGAGTAGTTATGTTGAATAATTCTTCCATGACGAGGGAAGATATGTGTTAGGTGGCCAAACACAATAAATACAAAAAAGCACTAAATATAACTATATTGCAACATCTCTCTTGGAGTCCCACTATGGAAACTCTCGTTAAAATGATACACATCTCTCTAAGGTGCTCAACTCCTCTTATTATAACCAATATACCACTAGTTAACTATCCATAATACCCGTTACTAATATCCTACTAATATTACCCATATATCCTTTAATTAGTACTCTCACAATATGGTTTTGAAGATGCTCTTTCAGTTGACTGGTCATATAAGATTTTTATTGAAGATGCAAAGTTGAAATGAAAGATATGATGGTCAGATGATTTGATCTCATATTGTTGAAAAAATAAAGCTTGTTAGCACTTAGCAGCCTAAGTTTATTTTATTGTTATTTGTTAGTTTCTTCTTATTTGAGTCCAAACATATGAAAAACTAAAGAAGCCAAGTAGGAAAATAGTATGTAGGTATGTATGTACGAACAATGCAATACAAACTGAAACATCAACACACTGGAAGCATCACCAATGAAATACATGAAACTAATCAAACACTCAACGGTAATAGGGAAAAACCAAAACAATTGTTCTATACCAAACTCAAGGAGAAGAAGTTGCAGGAGGAGGGAAGAATGGGAGCGACGATGGAAGTGTGGTCCGGATTGATGGGAGGGATGGCAAGTTTGGAAGTGAAGTTTTCGGGAGAGGAGGCAACGCTACTTTGGTCGGGATGTTCATGGGGAAGCTTGGAAGTGGAGAAGTGTAAGCTTAGGGAGCGAAGGTTGTGGGAAGTTTGGGATGAATGGAATAGTCGGACCGGGCATAGGGTTTGGCAAGATTGGCAATGGTGGTAGAGGCGGTATTGCAAATGGCTTCGACATTGGAGACATTGGTGGCAAATTTGGAATTGCCTGTAGAAGATGTCGAGTAGTTCGAGCAGCATTGACGCTTGAAAATGTCAAAGTAATGACGAAGGCGAGGATGAAGTGGTCGAAAGAAGCCATATGA

mRNA sequence

ATGCAGATAATTAGACTTCTTGGACCAACTCATGAGGCAAGAGAAGAAGTTGCAGGAGGAGGGAAGAATGGGAGCGACGATGGAAGTGTGGTCCGGATTGATGGGAGGGATGGCAAGTTTGGAAGTGAAGTTTTCGGGAGAGGAGGCAACGCTACTTTGGTCGGGATGTTCATGGGGAAGCTTGGAAGTGGAGAAGTAGGCGGTATTGCAAATGGCTTCGACATTGGAGACATTGGTGGCAAATTTGGAATTGCCTGTAGAAGATGTCGAGTAGTTCGAGCAGCATTGACGCTTGAAAATGTCAAAGTAATGACGAAGGCGAGGATGAAGTGGTCGAAAGAAGCCATATGA

Coding sequence (CDS)

ATGCAGATAATTAGACTTCTTGGACCAACTCATGAGGCAAGAGAAGAAGTTGCAGGAGGAGGGAAGAATGGGAGCGACGATGGAAGTGTGGTCCGGATTGATGGGAGGGATGGCAAGTTTGGAAGTGAAGTTTTCGGGAGAGGAGGCAACGCTACTTTGGTCGGGATGTTCATGGGGAAGCTTGGAAGTGGAGAAGTAGGCGGTATTGCAAATGGCTTCGACATTGGAGACATTGGTGGCAAATTTGGAATTGCCTGTAGAAGATGTCGAGTAGTTCGAGCAGCATTGACGCTTGAAAATGTCAAAGTAATGACGAAGGCGAGGATGAAGTGGTCGAAAGAAGCCATATGA

Protein sequence

MQIIRLLGPTHEAREEVAGGGKNGSDDGSVVRIDGRDGKFGSEVFGRGGNATLVGMFMGKLGSGEVGGIANGFDIGDIGGKFGIACRRCRVVRAALTLENVKVMTKARMKWSKEAI
Homology
[Close]
BLAST of Cla97C10G192670 vs. NCBI nr
Match: XP_016901486.1 (PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS33, partial [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 4.6e-27
Identity = 82/128 (64.06%), Postives = 85/128 (66.41%), Query Frame = 0 

Query: 15  EEVAGGG-KNGSDDGSVVRIDGRDGKFGSEVFGRGGNATLVGMFMGKLGSG--------- 74
           EEVAGGG KNGSDDGSVV IDGRDGKFGSEV GRGGNATLVGMFMG+LGSG         
Sbjct: 20  EEVAGGGEKNGSDDGSVVGIDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREG 79

Query: 75  ----EVGGI------------ANGFDIGDIGGKFGIACRRCRVVRAALTLENVKVMTKAR 117
                + GI            A+G     IGGKFGI CRRCR VRAA TLEN KV  KAR
Sbjct: 80  SGKFGMDGILGPVXXXXXXXXADGLGSDGIGGKFGIVCRRCREVRAASTLENAKVTMKAR 139

[Close]
BLAST of Cla97C10G192670 vs. TrEMBL
Match: tr|A0A1S4DZT7|A0A1S4DZT7_CUCME (uncharacterized PE-PGRS family protein PE_PGRS33 OS=Cucumis melo OX=3656 GN=LOC107991270 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.0e-27
Identity = 82/128 (64.06%), Postives = 85/128 (66.41%), Query Frame = 0 

Query: 15  EEVAGGG-KNGSDDGSVVRIDGRDGKFGSEVFGRGGNATLVGMFMGKLGSG--------- 74
           EEVAGGG KNGSDDGSVV IDGRDGKFGSEV GRGGNATLVGMFMG+LGSG         
Sbjct: 20  EEVAGGGEKNGSDDGSVVGIDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREG 79

Query: 75  ----EVGGI------------ANGFDIGDIGGKFGIACRRCRVVRAALTLENVKVMTKAR 117
                + GI            A+G     IGGKFGI CRRCR VRAA TLEN KV  KAR
Sbjct: 80  SGKFGMDGILGPVXXXXXXXXADGLGSDGIGGKFGIVCRRCREVRAASTLENAKVTMKAR 139

The following BLAST results are available for this feature:
BLAST of Cla97C10G192670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016901486.14.6e-2764.06PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS33, partial [Cucumis me... [more]
BLAST of Cla97C10G192670 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DZT7|A0A1S4DZT7_CUCME3.0e-2764.06uncharacterized PE-PGRS family protein PE_PGRS33 OS=Cucumis melo OX=3656 GN=LOC1... [more]
BLAST of Cla97C10G192670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C10G192670 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015976 carbon utilization
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0006730 one-carbon metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004089 carbonate dehydratase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G192670.1Cla97C10G192670.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C10G192670Cla006498Watermelon (97103) v1wmwmbB051
Cla97C10G192670ClCG10G009610Watermelon (Charleston Gray)wcgwmbB038
Cla97C10G192670CmaCh16G002740Cucurbita maxima (Rimu)cmawmbB332
Cla97C10G192670CmoCh16G002930Cucurbita moschata (Rifu)cmowmbB316
Cla97C10G192670Lsi03G009680Bottle gourd (USVL1VR-Ls)lsiwmbB218
Cla97C10G192670Carg19730Silver-seed gourdcarwmbB0302
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C10G192670Watermelon (97103) v2wmbwmbB060
Cla97C10G192670Silver-seed gourdcarwmbB0294
Cla97C10G192670Silver-seed gourdcarwmbB0391
Cla97C10G192670Cucumber (Gy14) v2cgybwmbB491
Cla97C10G192670Cucumber (Gy14) v1cgywmbB393
Cla97C10G192670Cucumber (Gy14) v1cgywmbB572
Cla97C10G192670Cucurbita maxima (Rimu)cmawmbB524
Cla97C10G192670Cucurbita maxima (Rimu)cmawmbB713
Cla97C10G192670Cucurbita moschata (Rifu)cmowmbB505
Cla97C10G192670Cucurbita moschata (Rifu)cmowmbB684
Cla97C10G192670Wild cucumber (PI 183967)cpiwmbB284
Cla97C10G192670Wild cucumber (PI 183967)cpiwmbB542
Cla97C10G192670Cucumber (Chinese Long) v3cucwmbB279
Cla97C10G192670Cucumber (Chinese Long) v3cucwmbB537
Cla97C10G192670Cucumber (Chinese Long) v2cuwmbB277
Cla97C10G192670Cucumber (Chinese Long) v2cuwmbB518
Cla97C10G192670Melon (DHL92) v3.6.1medwmbB160
Cla97C10G192670Melon (DHL92) v3.6.1medwmbB456
Cla97C10G192670Melon (DHL92) v3.5.1mewmbB174
Cla97C10G192670Melon (DHL92) v3.5.1mewmbB463
Cla97C10G192670Watermelon (Charleston Gray)wcgwmbB007
Cla97C10G192670Wax gourdwgowmbB001