CmaCh16G002740 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGACAATAGGAAAGAACAACAACTATTCTATACCAGCTCAAGGGGAAGAAGTTGCAGGTGGAGGAAAGAACGGGAGCGACGGAAGTGTAGTCGGGATGGATGGAAGGGATGGCAAGGTTGGAAGCGAAGATGTCGGTAATGGAGGCAAGGCTGCTCCGGTCGGGATGTTCATCGGGGAGCTTGGAAGTGGAGGAAGTGTGAGCTTAGGGAGCGATGGAGTACTCGGTCCAGTTGTTGGGTTTGGCAATATGGGCAATGCAGGTAGAGGGGGTAGCGCAGATGGGTTAGGAAGCGATGGCATTGGTGGTAGAGTTGGGAGTGAAGGCGGAGCAGTCTGCAGAAGATGTCGAGTGGCTCGACCAAGGTCCACGCTTGAAAATGCCAAAGCGACCATGATGGCTAAGGTCAAGTAG ATGAAGACAATAGGAAAGAACAACAACTATTCTATACCAGCTCAAGGGGAAGAAGTTGCAGGTGGAGGAAAGAACGGGAGCGACGGAAGTGTAGTCGGGATGGATGGAAGGGATGGCAAGGTTGGAAGCGAAGATGTCGGTAATGGAGGCAAGGCTGCTCCGGTCGGGATGTTCATCGGGGAGCTTGGAAGTGGAGGAAGTGTGAGCTTAGGGAGCGATGGAGTACTCGGTCCAGTTGTTGGGTTTGGCAATATGGGCAATGCAGGTAGAGGGGGTAGCGCAGATGGGTTAGGAAGCGATGGCATTGGTGGTAGAGTTGGGAGTGAAGGCGGAGCAGTCTGCAGAAGATGTCGAGTGGCTCGACCAAGGTCCACGCTTGAAAATGCCAAAGCGACCATGATGGCTAAGGTCAAGTAG ATGAAGACAATAGGAAAGAACAACAACTATTCTATACCAGCTCAAGGGGAAGAAGTTGCAGGTGGAGGAAAGAACGGGAGCGACGGAAGTGTAGTCGGGATGGATGGAAGGGATGGCAAGGTTGGAAGCGAAGATGTCGGTAATGGAGGCAAGGCTGCTCCGGTCGGGATGTTCATCGGGGAGCTTGGAAGTGGAGGAAGTGTGAGCTTAGGGAGCGATGGAGTACTCGGTCCAGTTGTTGGGTTTGGCAATATGGGCAATGCAGGTAGAGGGGGTAGCGCAGATGGGTTAGGAAGCGATGGCATTGGTGGTAGAGTTGGGAGTGAAGGCGGAGCAGTCTGCAGAAGATGTCGAGTGGCTCGACCAAGGTCCACGCTTGAAAATGCCAAAGCGACCATGATGGCTAAGGTCAAGTAG MKTIGKNNNYSIPAQGEEVAGGGKNGSDGSVVGMDGRDGKVGSEDVGNGGKAAPVGMFIGELGSGGSVSLGSDGVLGPVVGFGNMGNAGRGGSADGLGSDGIGGRVGSEGGAVCRRCRVARPRSTLENAKATMMAKVK
BLAST of CmaCh16G002740 vs. TrEMBL
Match: A0A0A0L0M4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G374620 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.5e-06 Identity = 47/111 (42.34%), Postives = 61/111 (54.95%), Query Frame = 1
BLAST of CmaCh16G002740 vs. NCBI nr
Match: gi|659125953|ref|XP_008462936.1| (PREDICTED: uncharacterized protein LOC103501198 [Cucumis melo]) HSP 1 Score: 89.7 bits (221), Expect = 4.2e-15 Identity = 67/136 (49.26%), Postives = 83/136 (61.03%), Query Frame = 1
BLAST of CmaCh16G002740 vs. NCBI nr
Match: gi|731384700|ref|XP_010648231.1| (PREDICTED: glycine, alanine and asparagine-rich protein-like [Vitis vinifera]) HSP 1 Score: 65.5 bits (158), Expect = 8.5e-08 Identity = 64/149 (42.95%), Postives = 82/149 (55.03%), Query Frame = 1
BLAST of CmaCh16G002740 vs. NCBI nr
Match: gi|700199436|gb|KGN54594.1| (hypothetical protein Csa_4G374620 [Cucumis sativus]) HSP 1 Score: 60.1 bits (144), Expect = 3.6e-06 Identity = 47/111 (42.34%), Postives = 61/111 (54.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |