Cla97C07G132830 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C07G132830
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Ring finger protein, putative
Location	Cla97Chr07 : 5026313 .. 5026819 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACATCCCAAGTCCCCCCGTCCATTACCTGGCACTTCACGGAGCTCGACGATCGGCTCTTCCAAATCCGCGGCCGGACTTTCTTCTTCGTCGCCGTTTTATTCGCCGTCATCCTTCTTGTAACTTTTATATTCCTTTACGCCCGATGGGTCTGCCGATTCCACCAACTCACCACCTTCTCCGCTGCCGTACCCGGCGGCCGGCCGCCGAGGTCGCCGCCGCATCTGGGGCTCGAGGCGACGGCGATTAACTGCCTCCCAATCACTCTATACAAGGCACCGGCGGCGGAGGAGGATCCAGGCTCCACCGCTACCGCTGCAGGAGGGGAGTGCTCCATTTGCTTGGGCGTGTTTGAGGATGGGGAGAAGGTGAAGATTCTGCCACCGTGCCGCCATTGTTACCATTCCGAGTGCGTTGACCGGTGGCTTCGATCGCAGTCGAGTTGCCCGCTTTGTCGTGTCTCTCTTTGTATCGATACTTCAAACAGTCTTCAAATGGTTTGA

mRNA sequence

ATGGCCACATCCCAAGTCCCCCCGTCCATTACCTGGCACTTCACGGAGCTCGACGATCGGCTCTTCCAAATCCGCGGCCGGACTTTCTTCTTCGTCGCCGTTTTATTCGCCGTCATCCTTCTTGTAACTTTTATATTCCTTTACGCCCGATGGGTCTGCCGATTCCACCAACTCACCACCTTCTCCGCTGCCGTACCCGGCGGCCGGCCGCCGAGGTCGCCGCCGCATCTGGGGCTCGAGGCGACGGCGATTAACTGCCTCCCAATCACTCTATACAAGGCACCGGCGGCGGAGGAGGATCCAGGCTCCACCGCTACCGCTGCAGGAGGGGAGTGCTCCATTTGCTTGGGCGTGTTTGAGGATGGGGAGAAGGTGAAGATTCTGCCACCGTGCCGCCATTGTTACCATTCCGAGTGCGTTGACCGGTGGCTTCGATCGCAGTCGAGTTGCCCGCTTTGTCGTGTCTCTCTTTGTATCGATACTTCAAACAGTCTTCAAATGGTTTGA

Coding sequence (CDS)

ATGGCCACATCCCAAGTCCCCCCGTCCATTACCTGGCACTTCACGGAGCTCGACGATCGGCTCTTCCAAATCCGCGGCCGGACTTTCTTCTTCGTCGCCGTTTTATTCGCCGTCATCCTTCTTGTAACTTTTATATTCCTTTACGCCCGATGGGTCTGCCGATTCCACCAACTCACCACCTTCTCCGCTGCCGTACCCGGCGGCCGGCCGCCGAGGTCGCCGCCGCATCTGGGGCTCGAGGCGACGGCGATTAACTGCCTCCCAATCACTCTATACAAGGCACCGGCGGCGGAGGAGGATCCAGGCTCCACCGCTACCGCTGCAGGAGGGGAGTGCTCCATTTGCTTGGGCGTGTTTGAGGATGGGGAGAAGGTGAAGATTCTGCCACCGTGCCGCCATTGTTACCATTCCGAGTGCGTTGACCGGTGGCTTCGATCGCAGTCGAGTTGCCCGCTTTGTCGTGTCTCTCTTTGTATCGATACTTCAAACAGTCTTCAAATGGTTTGA

Protein sequence

MATSQVPPSITWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTTFSAAVPGGRPPRSPPHLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFEDGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCRVSLCIDTSNSLQMV

Homology

[Close]

BLAST of Cla97C07G132830 vs. NCBI nr
Match: XP_016901617.1 (PREDICTED: RING-H2 finger protein ATL66 [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 9.2e-77
Identity = 147/169 (86.98%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1   MATSQVPPSITWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60
           MATSQVPPS+ WHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT
Sbjct: 1   MATSQVPPSVPWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60

Query: 61  FSAAVPGGRPPRSPP-HLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVF 120
           FSA++P  R PRSPP   GL ATAIN LPITLYKAPAAEEDP + A+ A GECSICLGVF
Sbjct: 61  FSASLPVRRQPRSPPQQQGLGATAINSLPITLYKAPAAEEDPPAAASDA-GECSICLGVF 120

Query: 121 EDGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCRVSLCIDTSNSLQMV 169
           EDGEKVKILPPCRHCYHSECVDRWLRS SSCPLCRVSLCID SN+L+MV
Sbjct: 121 EDGEKVKILPPCRHCYHSECVDRWLRSHSSCPLCRVSLCIDPSNNLEMV 168

[Close]

BLAST of Cla97C07G132830 vs. NCBI nr
Match: KGN50675.1 (hypothetical protein Csa_5G210015 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 5.6e-74
Identity = 140/168 (83.33%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 1   MATSQVPPSITWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60
           MATSQVPPS+ WHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT
Sbjct: 1   MATSQVPPSVPWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60

Query: 61  FSAAVPGGRPPRSPPHLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFE 120
           FSA +P  R P SPP  GL AT I  LPITLYK PAA+ED    A    GECSICLGVFE
Sbjct: 61  FSAPLPVHRLPSSPPQQGLGATTIISLPITLYKPPAAKEDAPGAAANDAGECSICLGVFE 120

Query: 121 DGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCRVSLCIDTSNSLQMV 169
           DGEKVKILPPCRHCYHSECVDRWLRS SSCPLCRVSLCID SN+L+MV
Sbjct: 121 DGEKVKILPPCRHCYHSECVDRWLRSHSSCPLCRVSLCIDPSNNLEMV 168

[Close]

BLAST of Cla97C07G132830 vs. NCBI nr
Match: XP_004148199.2 (PREDICTED: RING-H2 finger protein ATL66 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 1.6e-73
Identity = 139/167 (83.23%), Postives = 144/167 (86.23%), Query Frame = 0


Query: 1   MATSQVPPSITWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60
           MATSQVPPS+ WHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT
Sbjct: 1   MATSQVPPSVPWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60

Query: 61  FSAAVPGGRPPRSPPHLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFE 120
           FSA +P  R P SPP  GL AT I  LPITLYK PAA+ED    A    GECSICLGVFE
Sbjct: 61  FSAPLPVHRLPSSPPQQGLGATTIISLPITLYKPPAAKEDAPGAAANDAGECSICLGVFE 120

Query: 121 DGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCRVSLCIDTSNSLQM 168
           DGEKVKILPPCRHCYHSECVDRWLRS SSCPLCRVSLCID SN+L+M
Sbjct: 121 DGEKVKILPPCRHCYHSECVDRWLRSHSSCPLCRVSLCIDPSNNLEM 167

[Close]

BLAST of Cla97C07G132830 vs. NCBI nr
Match: XP_022996486.1 (RING-H2 finger protein ATL66 [Cucurbita maxima])

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 124/169 (73.37%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 1   MATSQVPPSITWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60
           MAT Q PPS+ WHFTELDDR+FQIRGRT FF+AVLFAVILLVTFIFLYARWVCR+H L T
Sbjct: 47  MATLQAPPSVHWHFTELDDRIFQIRGRTIFFIAVLFAVILLVTFIFLYARWVCRYHSLMT 106

Query: 61  FSAAVPGGRPPRSPPHLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFE 120
           FS AVPG R  RSPP  GL+  AINC PITLYK  AA E+  +T  A   EC ICLGVFE
Sbjct: 107 FSTAVPGVRSSRSPPQQGLDQAAINCQPITLYKEAAAVEEAAATPAATAAECCICLGVFE 166

Query: 121 DGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCRVSL-CIDTSNSLQMV 169
           DGEKVKIL  C HC+HSECVD+WLR QSSCPLCR+SL   D SN+LQMV
Sbjct: 167 DGEKVKILALCHHCFHSECVDQWLRLQSSCPLCRISLRAADNSNNLQMV 215

[Close]

BLAST of Cla97C07G132830 vs. NCBI nr
Match: XP_023511628.1 (RING-H2 finger protein ATL66-like [Cucurbita pepo subsp. pepo] >XP_023511760.1 RING-H2 finger protein ATL66-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.1 bits (632), Expect = 2.2e-62
Identity = 125/169 (73.96%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 1   MATSQVPPSITWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60
           MAT Q PPS+ WHFTELDDR+FQIRGRTFFF+AVLFAVILLVTFIFLYARWVCR+H LTT
Sbjct: 1   MATLQAPPSVHWHFTELDDRIFQIRGRTFFFIAVLFAVILLVTFIFLYARWVCRYHSLTT 60

Query: 61  FSAAVPGGRPPRSPPHLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFE 120
           FSA+VPG R  RSPP  GL+   INC  ITLYKA A E D  +TA     EC ICLGVFE
Sbjct: 61  FSASVPGVRSSRSPPQQGLDQATINCQSITLYKA-AEEVDAAATA----AECCICLGVFE 120

Query: 121 DGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCRVSL-CIDTSNSLQMV 169
           DGEKVKIL  C HC+HSECVD+WLR QSSCPLCR+SL   D SN+LQMV
Sbjct: 121 DGEKVKILALCHHCFHSECVDQWLRLQSSCPLCRISLRAADNSNNLQMV 164

[Close]

BLAST of Cla97C07G132830 vs. TrEMBL
Match: tr|A0A1S4E052|A0A1S4E052_CUCME (RING-H2 finger protein ATL66 OS=Cucumis melo OX=3656 GN=LOC103495122 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.1e-77
Identity = 147/169 (86.98%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1   MATSQVPPSITWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60
           MATSQVPPS+ WHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT
Sbjct: 1   MATSQVPPSVPWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60

Query: 61  FSAAVPGGRPPRSPP-HLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVF 120
           FSA++P  R PRSPP   GL ATAIN LPITLYKAPAAEEDP + A+ A GECSICLGVF
Sbjct: 61  FSASLPVRRQPRSPPQQQGLGATAINSLPITLYKAPAAEEDPPAAASDA-GECSICLGVF 120

Query: 121 EDGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCRVSLCIDTSNSLQMV 169
           EDGEKVKILPPCRHCYHSECVDRWLRS SSCPLCRVSLCID SN+L+MV
Sbjct: 121 EDGEKVKILPPCRHCYHSECVDRWLRSHSSCPLCRVSLCIDPSNNLEMV 168

[Close]

BLAST of Cla97C07G132830 vs. TrEMBL
Match: tr|A0A0A0KLZ2|A0A0A0KLZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G210015 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 3.7e-74
Identity = 140/168 (83.33%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 1   MATSQVPPSITWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60
           MATSQVPPS+ WHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT
Sbjct: 1   MATSQVPPSVPWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTT 60

Query: 61  FSAAVPGGRPPRSPPHLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFE 120
           FSA +P  R P SPP  GL AT I  LPITLYK PAA+ED    A    GECSICLGVFE
Sbjct: 61  FSAPLPVHRLPSSPPQQGLGATTIISLPITLYKPPAAKEDAPGAAANDAGECSICLGVFE 120

Query: 121 DGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCRVSLCIDTSNSLQMV 169
           DGEKVKILPPCRHCYHSECVDRWLRS SSCPLCRVSLCID SN+L+MV
Sbjct: 121 DGEKVKILPPCRHCYHSECVDRWLRSHSSCPLCRVSLCIDPSNNLEMV 168

[Close]

BLAST of Cla97C07G132830 vs. TrEMBL
Match: tr|A0A2P5EM55|A0A2P5EM55_9ROSA (43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_176200 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 9.8e-43
Identity = 88/160 (55.00%), Postives = 111/160 (69.38%), Query Frame = 0


Query: 2   ATSQVPPSITWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTTF 61
           + S+    + WH+T LDDR F+IRGRT FFV V+F+V+L+VT +FLYARWVCR+   TTF
Sbjct: 3   SASEETQPLQWHYTVLDDRNFEIRGRTLFFVIVVFSVLLVVTLLFLYARWVCRYRHATTF 62

Query: 62  SAAVPGGRPPRS-PPHLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFE 121
            AA     P  +  P  GL+A AI  LPI L+++    ++ G    +   EC ICLGVFE
Sbjct: 63  PAASTSHAPRAALAPSQGLDAAAIMGLPIVLHQSGDPGDEAGPGRVSGPAECCICLGVFE 122

Query: 122 DGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCRVSLCID 161
           DGEK+K+LP C HCYH ECVDRWL +QSSCPLCR SL +D
Sbjct: 123 DGEKLKVLPQCCHCYHPECVDRWLSTQSSCPLCRASLRVD 162

[Close]

BLAST of Cla97C07G132830 vs. TrEMBL
Match: tr|A0A2P5E0D7|A0A2P5E0D7_PARAD (43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_015000 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.7e-42
Identity = 92/163 (56.44%), Postives = 113/163 (69.33%), Query Frame = 0


Query: 2   ATSQVPPSITWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTTF 61
           + S+    + WH+T LDDR F+IRGRT FFV V+F+V+L+VT +FLYARWVCR+   TTF
Sbjct: 3   SASEETQPLQWHYTVLDDRNFEIRGRTLFFVIVVFSVLLVVTLLFLYARWVCRYRHATTF 62

Query: 62  SAAVPGGRPPRSP--PHLGLEATAINCLPITLYKA--PAAEEDPGSTATAAGGECSICLG 121
            A        R+P  P  GL+A AI  LPI L+++  P  E  PG  +  A  EC ICLG
Sbjct: 63  PAPAT-SHAQRAPLAPSQGLDAAAIMGLPIVLHQSGDPGDEAGPGRVSDPA--ECCICLG 122

Query: 122 VFEDGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCRVSLCID 161
           VFEDGEK+K+LP C HCYH ECVDRWL +QSSCPLCR SL +D
Sbjct: 123 VFEDGEKLKVLPQCCHCYHPECVDRWLSTQSSCPLCRASLRVD 162

[Close]

BLAST of Cla97C07G132830 vs. TrEMBL
Match: tr|A0A1S3XAN8|A0A1S3XAN8_TOBAC (RING-H2 finger protein ATL66-like OS=Nicotiana tabacum OX=4097 GN=LOC107762990 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.8e-41
Identity = 86/160 (53.75%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 3   TSQVPPSITWHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTTFS 62
           +SQ   S  WH+ E DD  FQIRGRT FFV VLFA+IL+ T +FLYARWVC+F   ++  
Sbjct: 21  SSQNSHSFHWHYAEFDDNDFQIRGRTLFFVVVLFAIILIATLLFLYARWVCKFRSPSSAE 80

Query: 63  AAVPGGRPPRSPPHLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFEDG 122
           AA     P   PP  GL+   I+ LPI L+++     +     TAA  EC ICLG+F+DG
Sbjct: 81  AARSAHAPSVPPPPQGLDPAFIDNLPIILHRSSDCRGN-----TAAEVECCICLGIFQDG 140

Query: 123 EKVKILPPCRHCYHSECVDRWLRSQSSCPLCRVSLCIDTS 163
           +KVK+LP C+HCYHSECVD+WLR+QSSCPLCR S+  D++
Sbjct: 141 DKVKVLPSCQHCYHSECVDKWLRNQSSCPLCRASIQFDSA 175

[Close]

BLAST of Cla97C07G132830 vs. Swiss-Prot
Match: sp|Q9SRM0|ATL66_ARATH (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.9e-26
Identity = 66/152 (43.42%), Postives = 84/152 (55.26%), Query Frame = 0


Query: 12  WHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTTFSAAVPGGRPP 71
           WH  + DDR FQI GRT FF   LF+V+L    + LY    C         A+ P  R  
Sbjct: 16  WHENQYDDRNFQIHGRTLFFALALFSVVLFFALLTLYIHRNCLPRDSINLHASSP-DRLT 75

Query: 72  RSPPHLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFEDGEKVKILPPC 131
           R     GL+   I  LP+ L +                    ICLG FE+GEK+K+LPPC
Sbjct: 76  RCRSG-GLDPAEIRSLPVVLCRRE-------XXXXXXXXXXXICLGGFEEGEKMKVLPPC 135

Query: 132 RHCYHSECVDRWLRSQSSCPLCRVSLCIDTSN 164
            HCYH ECVDRWL+++SSCPLCRVS+ +D+S+
Sbjct: 136 SHCYHCECVDRWLKTESSCPLCRVSIRVDSSS 158

[Close]

BLAST of Cla97C07G132830 vs. Swiss-Prot
Match: sp|Q67YI6|ATL65_ARATH (RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-15
Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 78  GLEATAINCLPITLYKAPAAEEDP--GSTATAAGGECSICLGVFEDGEKVKILPPCRHCY 137
           GL+ + I  LP+ LY A A    P  G T+ A   +C++CL  FE+G+ V+ LP C H +
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179

Query: 138 HSECVDRWLRSQSSCPLCRVSL 158
           H EC+D WLRS  +CPLCR ++
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAI 201

[Close]

BLAST of Cla97C07G132830 vs. Swiss-Prot
Match: sp|Q9LZV8|ATL74_ARATH (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.0e-15
Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 91  LYKAPAAEEDPGSTATAAGGECSICLGVFEDGEKVKILPPCRHCYHSECVDRWLRSQSSC 150
           L K P AE   G    AA  EC+ICLG F DGE+V++LPPC H +H  C+D WL S SSC
Sbjct: 85  LKKFPVAEYGSGEVKIAA-TECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSC 144

Query: 151 PLCRVSL 158
           P CR SL
Sbjct: 145 PNCRHSL 150

[Close]

BLAST of Cla97C07G132830 vs. Swiss-Prot
Match: sp|Q9ZT49|ATL45_ARATH (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.9e-15
Identity = 42/105 (40.00%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 57  QLTTFSAAVPGGRPPRSPPHLGLEATAINCLPITLYKA----PAAEEDPGSTATAAGG-- 116
           +LT  + A  G  P   PP+ GL+  A+  LP + Y A     AA +D   ++   G   
Sbjct: 54  RLTGVNPAAVGEAP---PPNKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSS 113

Query: 117 -ECSICLGVFEDGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCR 155
            EC+IC+  F +GE+++ILP C H +H  C+D+WL S+SSCP CR
Sbjct: 114 TECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155

[Close]

BLAST of Cla97C07G132830 vs. Swiss-Prot
Match: sp|Q7XLY8|ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-14
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 73  SPPHLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFEDGEKVKILPPCR 132
           SPP  GL+ T IN + +  Y+        G   T    +CS+CLG F DGE +++LP C 
Sbjct: 127 SPPS-GLDETLINKITVCKYR-----RGDGFVHTT---DCSVCLGEFSDGESLRLLPRCS 186

Query: 133 HCYHSECVDRWLRSQSSCPLCRVSLCIDT 162
           H +H +C+D WL+S S+CPLCR ++   T
Sbjct: 187 HAFHQQCIDTWLKSHSNCPLCRANITFVT 206

[Close]

BLAST of Cla97C07G132830 vs. TAIR10
Match: AT3G11110.1 (RING/U-box superfamily protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-27
Identity = 66/152 (43.42%), Postives = 84/152 (55.26%), Query Frame = 0


Query: 12  WHFTELDDRLFQIRGRTFFFVAVLFAVILLVTFIFLYARWVCRFHQLTTFSAAVPGGRPP 71
           WH  + DDR FQI GRT FF   LF+V+L    + LY    C         A+ P  R  
Sbjct: 16  WHENQYDDRNFQIHGRTLFFALALFSVVLFFALLTLYIHRNCLPRDSINLHASSP-DRLT 75

Query: 72  RSPPHLGLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFEDGEKVKILPPC 131
           R     GL+   I  LP+ L +                    ICLG FE+GEK+K+LPPC
Sbjct: 76  RCRSG-GLDPAEIRSLPVVLCRRE-------XXXXXXXXXXXICLGGFEEGEKMKVLPPC 135

Query: 132 RHCYHSECVDRWLRSQSSCPLCRVSLCIDTSN 164
            HCYH ECVDRWL+++SSCPLCRVS+ +D+S+
Sbjct: 136 SHCYHCECVDRWLKTESSCPLCRVSIRVDSSS 158

[Close]

BLAST of Cla97C07G132830 vs. TAIR10
Match: AT3G18930.1 (RING/U-box superfamily protein)

HSP 1 Score: 84.0 bits (206), Expect = 9.9e-17
Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 78  GLEATAINCLPITLYKAPAAEEDP--GSTATAAGGECSICLGVFEDGEKVKILPPCRHCY 137
           GL+ + I  LP+ LY A A    P  G T+ A   +C++CL  FE+G+ V+ LP C H +
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179

Query: 138 HSECVDRWLRSQSSCPLCRVSL 158
           H EC+D WLRS  +CPLCR ++
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAI 201

[Close]

BLAST of Cla97C07G132830 vs. TAIR10
Match: AT5G01880.1 (RING/U-box superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-16
Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 91  LYKAPAAEEDPGSTATAAGGECSICLGVFEDGEKVKILPPCRHCYHSECVDRWLRSQSSC 150
           L K P AE   G    AA  EC+ICLG F DGE+V++LPPC H +H  C+D WL S SSC
Sbjct: 85  LKKFPVAEYGSGEVKIAA-TECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSC 144

Query: 151 PLCRVSL 158
           P CR SL
Sbjct: 145 PNCRHSL 150

[Close]

BLAST of Cla97C07G132830 vs. TAIR10
Match: AT4G35480.1 (RING-H2 finger A3B)

HSP 1 Score: 81.6 bits (200), Expect = 4.9e-16
Identity = 42/105 (40.00%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 57  QLTTFSAAVPGGRPPRSPPHLGLEATAINCLPITLYKA----PAAEEDPGSTATAAGG-- 116
           +LT  + A  G  P   PP+ GL+  A+  LP + Y A     AA +D   ++   G   
Sbjct: 54  RLTGVNPAAVGEAP---PPNKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSS 113

Query: 117 -ECSICLGVFEDGEKVKILPPCRHCYHSECVDRWLRSQSSCPLCR 155
            EC+IC+  F +GE+++ILP C H +H  C+D+WL S+SSCP CR
Sbjct: 114 TECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155

[Close]

BLAST of Cla97C07G132830 vs. TAIR10
Match: AT3G10910.1 (RING/U-box superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15
Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 78  GLEATAINCLPITLYKAPAAEEDPGSTATAAGGECSICLGVFEDGEKVKILPPCRHCYHS 137
           GL+  A+  +P+ LY +   +            EC ICLG FEDGEKV++LP C H +H 
Sbjct: 88  GLKKQALKQIPVGLYGSGIID--------MKATECLICLGDFEDGEKVRVLPKCNHGFHV 147

Query: 138 ECVDRWLRSQSSCPLCRVSLCID 161
            C+D WL S+SSCP CR SL ++
Sbjct: 148 RCIDTWLLSRSSCPTCRQSLLLE 162

The following BLAST results are available for this feature:

BLAST of Cla97C07G132830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901617.1	9.2e-77	86.98	PREDICTED: RING-H2 finger protein ATL66 [Cucumis melo]	[more]
KGN50675.1	5.6e-74	83.33	hypothetical protein Csa_5G210015 [Cucumis sativus]	[more]
XP_004148199.2	1.6e-73	83.23	PREDICTED: RING-H2 finger protein ATL66 [Cucumis sativus]	[more]
XP_022996486.1	1.4e-64	73.37	RING-H2 finger protein ATL66 [Cucurbita maxima]	[more]
XP_023511628.1	2.2e-62	73.96	RING-H2 finger protein ATL66-like [Cucurbita pepo subsp. pepo] >XP_023511760.1 R...	[more]

BLAST of Cla97C07G132830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E052\|A0A1S4E052_CUCME	6.1e-77	86.98	RING-H2 finger protein ATL66 OS=Cucumis melo OX=3656 GN=LOC103495122 PE=4 SV=1	[more]
tr\|A0A0A0KLZ2\|A0A0A0KLZ2_CUCSA	3.7e-74	83.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G210015 PE=4 SV=1	[more]
tr\|A0A2P5EM55\|A0A2P5EM55_9ROSA	9.8e-43	55.00	43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_176200 PE=...	[more]
tr\|A0A2P5E0D7\|A0A2P5E0D7_PARAD	3.7e-42	56.44	43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_015000...	[more]
tr\|A0A1S3XAN8\|A0A1S3XAN8_TOBAC	1.8e-41	53.75	RING-H2 finger protein ATL66-like OS=Nicotiana tabacum OX=4097 GN=LOC107762990 P...	[more]

BLAST of Cla97C07G132830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SRM0\|ATL66_ARATH	2.9e-26	43.42	RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1	[more]
sp\|Q67YI6\|ATL65_ARATH	1.8e-15	45.12	RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2	[more]
sp\|Q9LZV8\|ATL74_ARATH	4.0e-15	56.72	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]
sp\|Q9ZT49\|ATL45_ARATH	8.9e-15	40.00	Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
sp\|Q7XLY8\|ATL41_ORYSJ	1.5e-14	41.57	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]

BLAST of Cla97C07G132830 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11110.1	1.6e-27	43.42	RING/U-box superfamily protein	[more]
AT3G18930.1	9.9e-17	45.12	RING/U-box superfamily protein	[more]
AT5G01880.1	2.2e-16	56.72	RING/U-box superfamily protein	[more]
AT4G35480.1	4.9e-16	40.00	RING-H2 finger A3B	[more]
AT3G10910.1	1.1e-15	44.58	RING/U-box superfamily protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044267	cellular protein metabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G132830.1	Cla97C07G132830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 112..153 e-value: 5.8E-6 score: 35.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 111..154 e-value: 7.6E-15 score: 54.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 112..154 score: 12.563
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 77..159 e-value: 3.0E-19 score: 70.4
None	No IPR available	PANTHER	PTHR14155:SF136	SUBFAMILY NOT NAMED	coord: 10..159
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 10..159
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 111..154 e-value: 3.44246E-15 score: 65.4009
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 88..161

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C07G132830	Cla004365	Watermelon (97103) v1	wmwmbB167
Cla97C07G132830	MELO3C018366	Melon (DHL92) v3.5.1	mewmbB069
Cla97C07G132830	ClCG07G004370	Watermelon (Charleston Gray)	wcgwmbB307
Cla97C07G132830	CSPI05G10840	Wild cucumber (PI 183967)	cpiwmbB412
Cla97C07G132830	Cucsa.368380	Cucumber (Gy14) v1	cgywmbB637
Cla97C07G132830	CmaCh04G001430	Cucurbita maxima (Rimu)	cmawmbB781
Cla97C07G132830	CmoCh04G001390	Cucurbita moschata (Rifu)	cmowmbB755
Cla97C07G132830	Lsi04G010850	Bottle gourd (USVL1VR-Ls)	lsiwmbB298
Cla97C07G132830	CsGy5G008170	Cucumber (Gy14) v2	cgybwmbB375
Cla97C07G132830	MELO3C018366.2	Melon (DHL92) v3.6.1	medwmbB064
Cla97C07G132830	CsaV3_5G010310	Cucumber (Chinese Long) v3	cucwmbB407
Cla97C07G132830	Bhi10G000644	Wax gourd	wgowmbB388
Cla97C07G132830	Bhi07G000489	Wax gourd	wgowmbB538

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla97C07G132830	Cla97C02G045430	Watermelon (97103) v2	wmbwmbB107

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C07G132830	Silver-seed gourd	carwmbB0091
Cla97C07G132830	Silver-seed gourd	carwmbB0540
Cla97C07G132830	Silver-seed gourd	carwmbB0700
Cla97C07G132830	Cucumber (Gy14) v2	cgybwmbB461
Cla97C07G132830	Cucumber (Gy14) v1	cgywmbB236
Cla97C07G132830	Cucurbita maxima (Rimu)	cmawmbB596
Cla97C07G132830	Cucurbita maxima (Rimu)	cmawmbB658
Cla97C07G132830	Cucurbita maxima (Rimu)	cmawmbB780
Cla97C07G132830	Cucurbita moschata (Rifu)	cmowmbB571
Cla97C07G132830	Cucurbita moschata (Rifu)	cmowmbB633
Cla97C07G132830	Cucurbita moschata (Rifu)	cmowmbB754
Cla97C07G132830	Wild cucumber (PI 183967)	cpiwmbB510
Cla97C07G132830	Cucumber (Chinese Long) v3	cucwmbB502
Cla97C07G132830	Cucumber (Chinese Long) v2	cuwmbB392
Cla97C07G132830	Cucumber (Chinese Long) v2	cuwmbB484
Cla97C07G132830	Bottle gourd (USVL1VR-Ls)	lsiwmbB069
Cla97C07G132830	Watermelon (Charleston Gray)	wcgwmbB165
Cla97C07G132830	Watermelon (97103) v1	wmwmbB346