Cla97C06G111490 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G111490
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Protein of unknown function (DUF 3339)
Location	Cla97Chr06 : 2250704 .. 2250916 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTGGGGGCCAGTTTTCGTAGCTGTGATTCTGTTTGTTTTGCTAACTCCAGGACTTCTCTTTCAGCTTCCCGGAAATCGCAGGTGCTTAGAGTTTGGCAACTTTCACACGAGTGCTGCTTCTATCATCGTCCATTCGATTCTCTACTTCGGTCTCATTTGCGTCTTCTTACTCGCCATCAAGGTTCATCTCTACATCGGTTCCTAA

mRNA sequence

ATGGCGGATTGGGGGCCAGTTTTCGTAGCTGTGATTCTGTTTGTTTTGCTAACTCCAGGACTTCTCTTTCAGCTTCCCGGAAATCGCAGGTGCTTAGAGTTTGGCAACTTTCACACGAGTGCTGCTTCTATCATCGTCCATTCGATTCTCTACTTCGGTCTCATTTGCGTCTTCTTACTCGCCATCAAGGTTCATCTCTACATCGGTTCCTAA

Coding sequence (CDS)

ATGGCGGATTGGGGGCCAGTTTTCGTAGCTGTGATTCTGTTTGTTTTGCTAACTCCAGGACTTCTCTTTCAGCTTCCCGGAAATCGCAGGTGCTTAGAGTTTGGCAACTTTCACACGAGTGCTGCTTCTATCATCGTCCATTCGATTCTCTACTTCGGTCTCATTTGCGTCTTCTTACTCGCCATCAAGGTTCATCTCTACATCGGTTCCTAA

Protein sequence

MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLLAIKVHLYIGS

Homology

[Close]

BLAST of Cla97C06G111490 vs. NCBI nr
Match: XP_008459846.1 (PREDICTED: uncharacterized protein LOC103498846 [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-30
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL
Sbjct: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60

Query: 61 AIKVHLYIGS 71
          AIKVHLYIGS
Sbjct: 61 AIKVHLYIGS 70

[Close]

BLAST of Cla97C06G111490 vs. NCBI nr
Match: XP_011656810.1 (PREDICTED: uncharacterized protein LOC101208994 [Cucumis sativus] >KGN46463.1 hypothetical protein Csa_6G095300 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 4.6e-30
Identity = 68/70 (97.14%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAA+IIVHSILYFGLICVFLL
Sbjct: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60

Query: 61 AIKVHLYIGS 71
          AIKVHLYIGS
Sbjct: 61 AIKVHLYIGS 70

[Close]

BLAST of Cla97C06G111490 vs. NCBI nr
Match: XP_022991385.1 (uncharacterized protein LOC111488037 isoform X2 [Cucurbita maxima] >XP_023514785.1 uncharacterized protein LOC111778992 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.4 bits (350), Expect = 4.6e-30
Identity = 68/70 (97.14%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAA+IIVHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSVLYFGLICVFLL 60

Query: 61 AIKVHLYIGS 71
          AIKVHLYIGS
Sbjct: 61 AIKVHLYIGS 70

[Close]

BLAST of Cla97C06G111490 vs. NCBI nr
Match: XP_022960371.1 (uncharacterized protein LOC111461116 [Cucurbita moschata] >XP_023004229.1 uncharacterized protein LOC111497623 [Cucurbita maxima] >XP_023513527.1 uncharacterized protein LOC111778105 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.7 bits (343), Expect = 3.0e-29
Identity = 66/69 (95.65%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAA+I+VHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLL 60

Query: 61 AIKVHLYIG 70
          AIKVHLYIG
Sbjct: 61 AIKVHLYIG 69

[Close]

BLAST of Cla97C06G111490 vs. NCBI nr
Match: XP_022155443.1 (uncharacterized protein LOC111022585 [Momordica charantia])

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-28
Identity = 64/69 (92.75%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAA+I+VHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60

Query: 61 AIKVHLYIG 70
          A+KVHLYIG
Sbjct: 61 AVKVHLYIG 69

[Close]

BLAST of Cla97C06G111490 vs. TrEMBL
Match: tr|A0A1S3CBL1|A0A1S3CBL1_CUCME (uncharacterized protein LOC103498846 OS=Cucumis melo OX=3656 GN=LOC103498846 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-30
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL
Sbjct: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60

Query: 61 AIKVHLYIGS 71
          AIKVHLYIGS
Sbjct: 61 AIKVHLYIGS 70

[Close]

BLAST of Cla97C06G111490 vs. TrEMBL
Match: tr|A0A0A0KAG8|A0A0A0KAG8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095300 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.0e-30
Identity = 68/70 (97.14%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAA+IIVHSILYFGLICVFLL
Sbjct: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60

Query: 61 AIKVHLYIGS 71
          AIKVHLYIGS
Sbjct: 61 AIKVHLYIGS 70

[Close]

BLAST of Cla97C06G111490 vs. TrEMBL
Match: tr|A0A1R3IZX9|A0A1R3IZX9_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_20426 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-25
Identity = 59/69 (85.51%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          M+DWGPVFVAVILFVLLTPGLLFQ+PG+ RC+EFGNF TS ASI+VHS+LYFGLICVFLL
Sbjct: 1  MSDWGPVFVAVILFVLLTPGLLFQVPGHHRCVEFGNFKTSGASILVHSLLYFGLICVFLL 60

Query: 61 AIKVHLYIG 70
          AIKVHLY+G
Sbjct: 61 AIKVHLYLG 69

[Close]

BLAST of Cla97C06G111490 vs. TrEMBL
Match: tr|A0A061E622|A0A061E622_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_008724 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.0e-25
Identity = 57/69 (82.61%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          M+DWGPVFVAV+LFVLLTPGLLFQ+PG+ RC++FGNF TS ASI+VHS+LYFGLICVFLL
Sbjct: 1  MSDWGPVFVAVVLFVLLTPGLLFQVPGHLRCVDFGNFKTSGASILVHSLLYFGLICVFLL 60

Query: 61 AIKVHLYIG 70
          AIKVHLY+G
Sbjct: 61 AIKVHLYLG 69

[Close]

BLAST of Cla97C06G111490 vs. TrEMBL
Match: tr|A0A067K3J9|A0A067K3J9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17983 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.0e-25
Identity = 56/69 (81.16%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          M+DWGPVFVAVILFVLLTPGLLFQ+PGNRRC+EFGNF TS ASI+VHS+LYF L+CVF L
Sbjct: 1  MSDWGPVFVAVILFVLLTPGLLFQVPGNRRCVEFGNFQTSGASIMVHSLLYFALVCVFFL 60

Query: 61 AIKVHLYIG 70
          A++VHLY+G
Sbjct: 61 ALRVHLYLG 69

[Close]

BLAST of Cla97C06G111490 vs. TAIR10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339))

HSP 1 Score: 112.5 bits (280), Expect = 1.1e-25
Identity = 51/69 (73.91%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          M+DWGPV V VILFV+LTPGLLFQLPG ++ +EFGNF TSA S+IVHS+LYF L+CVFLL
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 AIKVHLYIG 70
          A+K+H+YIG
Sbjct: 61 ALKIHIYIG 69

[Close]

BLAST of Cla97C06G111490 vs. TAIR10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339))

HSP 1 Score: 100.9 bits (250), Expect = 3.3e-22
Identity = 47/70 (67.14%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          MADWGPV VAVILFVLLTPGLLFQ+P   R +EFGN  TS ASI+VH+I++FGLI +F +
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 AIKVHLYIGS 71
          AI++H+Y G+
Sbjct: 61 AIRLHIYTGT 70

[Close]

BLAST of Cla97C06G111490 vs. TAIR10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339))

HSP 1 Score: 97.4 bits (241), Expect = 3.6e-21
Identity = 45/69 (65.22%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          MADWGPV +AVILFV+L+PGLLFQ+P   R +EFGN  TS ASI+VH+I++FGLI +F +
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 AIKVHLYIG 70
          AI VH+Y G
Sbjct: 61 AINVHIYSG 69

[Close]

BLAST of Cla97C06G111490 vs. TAIR10
Match: AT3G27030.1 (unknown protein)

HSP 1 Score: 94.0 bits (232), Expect = 4.0e-20
Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60
          M DWGPVFVAV LFVLLTPGLL Q+PG  R +EFG F TS  S+IVH+++YF L+C+ LL
Sbjct: 1  MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 61 AIKVHL 67
          A+++H+
Sbjct: 61 ALQIHI 66

[Close]

BLAST of Cla97C06G111490 vs. TAIR10
Match: AT3G01940.1 (Protein of unknown function (DUF 3339))

HSP 1 Score: 87.8 bits (216), Expect = 2.9e-18
Identity = 41/67 (61.19%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 2  ADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLLA 61
          ADWGPV VAV+LFV+L+PGLLFQLP  RR LE GN  TS  SI+VH+IL+F +I + ++A
Sbjct: 4  ADWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIA 63

Query: 62 IKVHLYI 69
          I++H++I
Sbjct: 64 IQIHIHI 70

The following BLAST results are available for this feature:

BLAST of Cla97C06G111490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459846.1	2.1e-30	98.57	PREDICTED: uncharacterized protein LOC103498846 [Cucumis melo]	[more]
XP_011656810.1	4.6e-30	97.14	PREDICTED: uncharacterized protein LOC101208994 [Cucumis sativus] >KGN46463.1 hy...	[more]
XP_022991385.1	4.6e-30	97.14	uncharacterized protein LOC111488037 isoform X2 [Cucurbita maxima] >XP_023514785...	[more]
XP_022960371.1	3.0e-29	95.65	uncharacterized protein LOC111461116 [Cucurbita moschata] >XP_023004229.1 unchar...	[more]
XP_022155443.1	1.9e-28	92.75	uncharacterized protein LOC111022585 [Momordica charantia]	[more]

BLAST of Cla97C06G111490 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CBL1\|A0A1S3CBL1_CUCME	1.4e-30	98.57	uncharacterized protein LOC103498846 OS=Cucumis melo OX=3656 GN=LOC103498846 PE=...	[more]
tr\|A0A0A0KAG8\|A0A0A0KAG8_CUCSA	3.0e-30	97.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095300 PE=4 SV=1	[more]
tr\|A0A1R3IZX9\|A0A1R3IZX9_9ROSI	1.0e-25	85.51	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_20426 PE=4 SV=1	[more]
tr\|A0A061E622\|A0A061E622_THECC	5.0e-25	82.61	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_008724 PE=4 SV=1	[more]
tr\|A0A067K3J9\|A0A067K3J9_JATCU	5.0e-25	81.16	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17983 PE=4 SV=1	[more]

BLAST of Cla97C06G111490 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C06G111490 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08391.1	1.1e-25	73.91	Protein of unknown function (DUF 3339)	[more]
AT3G48660.1	3.3e-22	67.14	Protein of unknown function (DUF 3339)	[more]
AT5G63500.1	3.6e-21	65.22	Protein of unknown function (DUF 3339)	[more]
AT3G27030.1	4.0e-20	63.64	unknown protein	[more]
AT3G01940.1	2.9e-18	61.19	Protein of unknown function (DUF 3339)	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021775	DUF3339

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G111490.1	Cla97C06G111490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 1..67 e-value: 1.3E-34 score: 118.1
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	FAMILY NOT NAMED	coord: 1..69
None	No IPR available	PANTHER	PTHR33128:SF7	SUBFAMILY NOT NAMED	coord: 1..69

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C06G111490	Cla000689	Watermelon (97103) v1	wmwmbB407
Cla97C06G111490	Csa6G095300	Cucumber (Chinese Long) v2	cuwmbB468
Cla97C06G111490	MELO3C022313	Melon (DHL92) v3.5.1	mewmbB127
Cla97C06G111490	ClCG06G002170	Watermelon (Charleston Gray)	wcgwmbB273
Cla97C06G111490	CSPI06G07850	Wild cucumber (PI 183967)	cpiwmbB495
Cla97C06G111490	Cucsa.349680	Cucumber (Gy14) v1	cgywmbB596
Cla97C06G111490	CmaCh08G001760	Cucurbita maxima (Rimu)	cmawmbB920
Cla97C06G111490	CmaCh17G014400	Cucurbita maxima (Rimu)	cmawmbB369
Cla97C06G111490	CmoCh08G001790	Cucurbita moschata (Rifu)	cmowmbB894
Cla97C06G111490	CmoCh17G013810	Cucurbita moschata (Rifu)	cmowmbB354
Cla97C06G111490	Lsi09G017230	Bottle gourd (USVL1VR-Ls)	lsiwmbB026
Cla97C06G111490	MELO3C022313.2	Melon (DHL92) v3.6.1	medwmbB118
Cla97C06G111490	Carg11600	Silver-seed gourd	carwmbB0011
Cla97C06G111490	Carg05006	Silver-seed gourd	carwmbB0077
Cla97C06G111490	Carg15464	Silver-seed gourd	carwmbB0721
Cla97C06G111490	CsaV3_6G008240	Cucumber (Chinese Long) v3	cucwmbB487

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C06G111490	Watermelon (Charleston Gray)	wcgwmbB241
Cla97C06G111490	Watermelon (97103) v1	wmwmbB411
Cla97C06G111490	Wax gourd	wgowmbB086
Cla97C06G111490	Silver-seed gourd	carwmbB0078
Cla97C06G111490	Cucumber (Gy14) v2	cgybwmbB446
Cla97C06G111490	Cucurbita maxima (Rimu)	cmawmbB924
Cla97C06G111490	Cucurbita moschata (Rifu)	cmowmbB899