Cla97C06G111120 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G111120
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	LITAF-domain-containing protein
Location	Cla97Chr06 : 1776246 .. 1777951 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAGAACGACGAGCCGGTCGTCGGAATCCCACTTTACGACGGCAACAACGCCTATCAGGCTGGCCAGATCCCTTCCAACGCCATTTTTGGCGATCCCCAGGGGGTTCCTATCCACCAAACCATGTACCGCGACACTCCTGCTCCCTTCTACTGTGTTTATTGTGGAAATTCCGGCCTCACCGCCGTCAGGTGTCTTTTCTACCTTCTCTCTAGCCCTACATTTACGTTCTTTTTCTCCTTTCTTTGATCTCTTTCAAATTCTATGTCTAATTGTTCTGTTAATTGTCTTTTCCTTTTTTTTCTCCCATGGATATCCCTTCGTTTGTTTTTAACTCAATTGTGAAATTCAGATACGGTTTTTGGGTATTGAAATTTTCGCTTTCGTTTATTGAAACTTGTGTTTGATTGATCAATGGGCCTTCCCCTTTTTTGTCTTTGACCTAATTTTCTTCTTTTGGATTAGAATCACTTGTACGCGATAAAATTTCGTGGGTAATGAAACTTTACTTACAACATAAGGCAGGAATTGTCTGATTGTTGCCGCTATGCTCAAACAACTAATTAAAATTATTTGAGTGACGTTTACCCAATTTACTCAAGATGTCTTAGAAACTGTTGTTGCTTGGATGTTTAATTACCTGATTCTGCTCTATAAAGTATAGTACTTCGTTTATATTGGTTTCATAATTGTCTGCCATCAAACTTTTACTATTGTCCAATCATGTTTACCTTGCTGCTTGTGTTTGGTATCTTACATAAAACTAATTAGATCCACGGTAGTTACTTTGTGTTTGTTGTTAAATTTTTATAAACACCAAGTCTGGACGCATTTGGAAGGTAGATAAAATTCAAGAGCTTCGAAATGGTGCACACCATACAAAGTTCTGTTTGGCTGTAAAAGATTCAAATGGTTTACTTTTACATTAGATGCTCCCTTCTTTACAAATATGGGGAATTTGAAATTTTTTAGTTGGACTTCTCAATCAATCTAATCTGTTGGCATTGCATTGAAATTTTTGTTTTGTTTATCAACAAAAACAAAGAAAATTACAATAGTAGCATAAATAATTGGTTACGATGTTACAATTTTAGTTTTTAGTGAGAGTTGCATAATAAATATATGTTCAAATGTTAGGATTGTATACACTCAGACAAGAATGTTGTTGCTCATAAGCTCAAGACTTGTTGTAGCAGGGTACCGATGTTATTTATCATGTTTGGGCAGCAAAAGTTTGATAATGTAATTATTTTTACAAAGAATATATAGGAAGGGAAGATAGGTGGATGTCCTATGATTGTGTTAACGGTTGAATAATTGTGTCTTTTTCATCTGGTTCTGCTGCTTTCGTGATCTCTCCAGATCAAAGTTAAGTTCAGCTGCTGTGGTTGGTTGTATGATGCCATTTATGTTGGGAGTATGCTTTCTTTGTCCTTCAATGGACTGCCTTTGGCATAAGTATCACTATTGCCCCAGCTGCAAGGAGAAGGTACAACTATTTCCGGTCCTTGTTCATTCTGTCAGTTGCTTCTTGTAATCTACATATTGTTTATTTGACACTTTGCTTTATTATGGATAATTGGAGGAGTAATTAACTATGCTATCCATCTTTTGTTTAGGTTGGTGATTTTGAGAAATTGGATAGGTGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTTCGCACTGCCTGCTTGA

mRNA sequence

ATGTCCAAGAACGACGAGCCGGTCGTCGGAATCCCACTTTACGACGGCAACAACGCCTATCAGGCTGGCCAGATCCCTTCCAACGCCATTTTTGGCGATCCCCAGGGGGTTCCTATCCACCAAACCATGTACCGCGACACTCCTGCTCCCTTCTACTGTGTTTATTGTGGAAATTCCGGCCTCACCGCCGTCAGATCAAAGTTAAGTTCAGCTGCTGTGGTTGGTTGTATGATGCCATTTATGTTGGGAGTATGCTTTCTTTGTCCTTCAATGGACTGCCTTTGGCATAAGTATCACTATTGCCCCAGCTGCAAGGAGAAGGTTGGTGATTTTGAGAAATTGGATAGGTGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTTCGCACTGCCTGCTTGA

Coding sequence (CDS)

ATGTCCAAGAACGACGAGCCGGTCGTCGGAATCCCACTTTACGACGGCAACAACGCCTATCAGGCTGGCCAGATCCCTTCCAACGCCATTTTTGGCGATCCCCAGGGGGTTCCTATCCACCAAACCATGTACCGCGACACTCCTGCTCCCTTCTACTGTGTTTATTGTGGAAATTCCGGCCTCACCGCCGTCAGATCAAAGTTAAGTTCAGCTGCTGTGGTTGGTTGTATGATGCCATTTATGTTGGGAGTATGCTTTCTTTGTCCTTCAATGGACTGCCTTTGGCATAAGTATCACTATTGCCCCAGCTGCAAGGAGAAGGTTGGTGATTTTGAGAAATTGGATAGGTGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTTCGCACTGCCTGCTTGA

Protein sequence

MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSGLTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA

Homology

[Close]

BLAST of Cla97C06G111120 vs. NCBI nr
Match: XP_022148974.1 (GSH-induced LITAF domain protein [Momordica charantia])

HSP 1 Score: 275.4 bits (703), Expect = 1.0e-70
Identity = 122/134 (91.04%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           MSKNDEPVVGIPLY G+NAYQAGQIPSNAI+GDPQGVPI QTM+RDTPAPFYC+YCGNSG
Sbjct: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           LT+VRSK+SSAAVVGCM+PFMLGVCFL PSM+CLWHKYHYCP+CKEKVGDFEKLDRCAVM
Sbjct: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALPA 135
           DPPHWTQPSFALPA
Sbjct: 121 DPPHWTQPSFALPA 134

[Close]

BLAST of Cla97C06G111120 vs. NCBI nr
Match: XP_004140553.1 (PREDICTED: uncharacterized protein LOC101221688 [Cucumis sativus] >KGN46422.1 hypothetical protein Csa_6G091950 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 3.0e-70
Identity = 121/133 (90.98%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           MSKN EPVVG+PLY GNN YQAGQIP NAIFGDP GVPI QTMYRDTPAPF CVYCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPHGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           LT +RSK+SSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM
Sbjct: 61  LTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALP 134
           DPPHWTQPS+ALP
Sbjct: 121 DPPHWTQPSYALP 133

[Close]

BLAST of Cla97C06G111120 vs. NCBI nr
Match: XP_022954275.1 (GSH-induced LITAF domain protein [Cucurbita moschata] >XP_023547364.1 GSH-induced LITAF domain protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.9 bits (699), Expect = 3.0e-70
Identity = 122/134 (91.04%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           MSKNDEPVVGIP Y GNNAYQAGQIP NAIFG PQGVPIHQTMYRDTPAP+ CVYCGNSG
Sbjct: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           LT++RSK+S AAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEK D CAVM
Sbjct: 61  LTSIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKSDVCAVM 120

Query: 121 DPPHWTQPSFALPA 135
           DPPHWTQPSFALPA
Sbjct: 121 DPPHWTQPSFALPA 134

[Close]

BLAST of Cla97C06G111120 vs. NCBI nr
Match: XP_022991744.1 (GSH-induced LITAF domain protein [Cucurbita maxima])

HSP 1 Score: 273.5 bits (698), Expect = 3.9e-70
Identity = 121/134 (90.30%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           MSKNDEPVVGIP Y GNN+YQAGQIP NAIFG PQGVPIHQTMYRDTPAP+ CVYCGNSG
Sbjct: 1   MSKNDEPVVGIPFYVGNNSYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           LT++RSK+S AAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEK D CAVM
Sbjct: 61  LTSIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKSDACAVM 120

Query: 121 DPPHWTQPSFALPA 135
           DPPHWTQPSFALPA
Sbjct: 121 DPPHWTQPSFALPA 134

[Close]

BLAST of Cla97C06G111120 vs. NCBI nr
Match: XP_008459901.1 (PREDICTED: uncharacterized protein LOC103498881 [Cucumis melo])

HSP 1 Score: 271.6 bits (693), Expect = 1.5e-69
Identity = 120/133 (90.23%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           MSKN EPVVG+PLY GNN YQAGQIP N IFGDPQGVPI QTMYRDTPAPF CVYCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           LT +RSK+S AAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM
Sbjct: 61  LTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALP 134
           DPPHWTQPS+ALP
Sbjct: 121 DPPHWTQPSYALP 133

[Close]

BLAST of Cla97C06G111120 vs. TrEMBL
Match: tr|A0A0A0KDG7|A0A0A0KDG7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091950 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.0e-70
Identity = 121/133 (90.98%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           MSKN EPVVG+PLY GNN YQAGQIP NAIFGDP GVPI QTMYRDTPAPF CVYCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPHGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           LT +RSK+SSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM
Sbjct: 61  LTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALP 134
           DPPHWTQPS+ALP
Sbjct: 121 DPPHWTQPSYALP 133

[Close]

BLAST of Cla97C06G111120 vs. TrEMBL
Match: tr|A0A1S3CCH3|A0A1S3CCH3_CUCME (uncharacterized protein LOC103498881 OS=Cucumis melo OX=3656 GN=LOC103498881 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 9.8e-70
Identity = 120/133 (90.23%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           MSKN EPVVG+PLY GNN YQAGQIP N IFGDPQGVPI QTMYRDTPAPF CVYCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           LT +RSK+S AAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM
Sbjct: 61  LTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALP 134
           DPPHWTQPS+ALP
Sbjct: 121 DPPHWTQPSYALP 133

[Close]

BLAST of Cla97C06G111120 vs. TrEMBL
Match: tr|A0A2H5N9D1|A0A2H5N9D1_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_024690 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.4e-62
Identity = 108/134 (80.60%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           M+KNDEPVVG+P Y G N YQ G+IP NAI GDP G+PI QT+YRDTPAPF CVYCGNSG
Sbjct: 1   MAKNDEPVVGVPFYVGQNPYQKGEIPPNAILGDPMGIPIQQTIYRDTPAPFSCVYCGNSG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           +T VRSK SSAAVVGCMMPF LG+CFLCPSMDCLWHKYHYCPSC EKV +FEK D CAVM
Sbjct: 61  VTQVRSKPSSAAVVGCMMPFFLGICFLCPSMDCLWHKYHYCPSCNEKVANFEKRDICAVM 120

Query: 121 DPPHWTQPSFALPA 135
           DPPHWTQ SFALPA
Sbjct: 121 DPPHWTQLSFALPA 134

[Close]

BLAST of Cla97C06G111120 vs. TrEMBL
Match: tr|V4VHJ1|V4VHJ1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033047mg PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.4e-62
Identity = 108/134 (80.60%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           M+KNDEPVVG+P Y G N YQ G+IP NAI GDP G+PI QT+YRDTPAPF CVYCGNSG
Sbjct: 1   MAKNDEPVVGVPFYVGQNPYQKGEIPPNAILGDPMGIPIQQTIYRDTPAPFSCVYCGNSG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           +T VRSK SSAAVVGCMMPF LG+CFLCPSMDCLWHKYHYCPSC EKV +FEK D CAVM
Sbjct: 61  VTQVRSKPSSAAVVGCMMPFFLGICFLCPSMDCLWHKYHYCPSCNEKVANFEKRDICAVM 120

Query: 121 DPPHWTQPSFALPA 135
           DPPHWTQ SFALPA
Sbjct: 121 DPPHWTQLSFALPA 134

[Close]

BLAST of Cla97C06G111120 vs. TrEMBL
Match: tr|A0A067GTW3|A0A067GTW3_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032751mg PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.4e-62
Identity = 108/134 (80.60%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           M+KNDEPVVG+P Y G N YQ G+IP NAI GDP G+PI QT+YRDTPAPF CVYCGNSG
Sbjct: 1   MAKNDEPVVGVPFYVGQNPYQKGEIPPNAILGDPMGIPIQQTIYRDTPAPFSCVYCGNSG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           +T VRSK SSAAVVGCMMPF LG+CFLCPSMDCLWHKYHYCPSC EKV +FEK D CAVM
Sbjct: 61  VTQVRSKPSSAAVVGCMMPFFLGICFLCPSMDCLWHKYHYCPSCNEKVANFEKRDICAVM 120

Query: 121 DPPHWTQPSFALPA 135
           DPPHWTQ SFALPA
Sbjct: 121 DPPHWTQLSFALPA 134

[Close]

BLAST of Cla97C06G111120 vs. Swiss-Prot
Match: sp|Q94CD4|GILP_ARATH (GSH-induced LITAF domain protein OS=Arabidopsis thaliana OX=3702 GN=GILP PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.7e-54
Identity = 93/134 (69.40%), Postives = 104/134 (77.61%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           M+K    V+G+P Y G N YQAG +P NAI+GDP G PI QT+YRDTPAPF C+YCGN+G
Sbjct: 1   MAKEGTTVIGVPYYAGQNPYQAGIVPPNAIYGDPLGAPIQQTIYRDTPAPFNCLYCGNTG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           LT +RSK   AAVV CMMPFMLG CFLCPSMDCLW+K H+CP C  KV DFEK D C VM
Sbjct: 61  LTNLRSKPGVAAVVACMMPFMLGFCFLCPSMDCLWNKQHHCPQCGNKVADFEKSDPCLVM 120

Query: 121 DPPHWTQPSFALPA 135
           DPP W QPSFALPA
Sbjct: 121 DPPQWKQPSFALPA 134

[Close]

BLAST of Cla97C06G111120 vs. TAIR10
Match: AT5G13190.1 (LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629))

HSP 1 Score: 212.6 bits (540), Expect = 1.5e-55
Identity = 93/134 (69.40%), Postives = 104/134 (77.61%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYDGNNAYQAGQIPSNAIFGDPQGVPIHQTMYRDTPAPFYCVYCGNSG 60
           M+K    V+G+P Y G N YQAG +P NAI+GDP G PI QT+YRDTPAPF C+YCGN+G
Sbjct: 1   MAKEGTTVIGVPYYAGQNPYQAGIVPPNAIYGDPLGAPIQQTIYRDTPAPFNCLYCGNTG 60

Query: 61  LTAVRSKLSSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120
           LT +RSK   AAVV CMMPFMLG CFLCPSMDCLW+K H+CP C  KV DFEK D C VM
Sbjct: 61  LTNLRSKPGVAAVVACMMPFMLGFCFLCPSMDCLWNKQHHCPQCGNKVADFEKSDPCLVM 120

Query: 121 DPPHWTQPSFALPA 135
           DPP W QPSFALPA
Sbjct: 121 DPPQWKQPSFALPA 134

The following BLAST results are available for this feature:

BLAST of Cla97C06G111120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148974.1	1.0e-70	91.04	GSH-induced LITAF domain protein [Momordica charantia]	[more]
XP_004140553.1	3.0e-70	90.98	PREDICTED: uncharacterized protein LOC101221688 [Cucumis sativus] >KGN46422.1 hy...	[more]
XP_022954275.1	3.0e-70	91.04	GSH-induced LITAF domain protein [Cucurbita moschata] >XP_023547364.1 GSH-induce...	[more]
XP_022991744.1	3.9e-70	90.30	GSH-induced LITAF domain protein [Cucurbita maxima]	[more]
XP_008459901.1	1.5e-69	90.23	PREDICTED: uncharacterized protein LOC103498881 [Cucumis melo]	[more]

BLAST of Cla97C06G111120 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KDG7\|A0A0A0KDG7_CUCSA	2.0e-70	90.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091950 PE=4 SV=1	[more]
tr\|A0A1S3CCH3\|A0A1S3CCH3_CUCME	9.8e-70	90.23	uncharacterized protein LOC103498881 OS=Cucumis melo OX=3656 GN=LOC103498881 PE=...	[more]
tr\|A0A2H5N9D1\|A0A2H5N9D1_CITUN	4.4e-62	80.60	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_024690 PE=4 SV=1	[more]
tr\|V4VHJ1\|V4VHJ1_9ROSI	4.4e-62	80.60	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033047mg PE=4 ...	[more]
tr\|A0A067GTW3\|A0A067GTW3_CITSI	4.4e-62	80.60	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032751mg PE=4 SV=1	[more]

BLAST of Cla97C06G111120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94CD4\|GILP_ARATH	2.7e-54	69.40	GSH-induced LITAF domain protein OS=Arabidopsis thaliana OX=3702 GN=GILP PE=1 SV...	[more]

BLAST of Cla97C06G111120 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13190.1	1.5e-55	69.40	LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629)	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR037519	LITAF_fam
IPR006629	LITAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034051	negative regulation of plant-type hypersensitive response
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0009646	response to absence of light
biological_process	GO:0009863	salicylic acid mediated signaling pathway
biological_process	GO:0008150	biological_process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G111120.1	Cla97C06G111120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006629	LPS-induced tumour necrosis factor alpha factor	SMART	SM00714	litaf	coord: 48..113 e-value: 5.6E-13 score: 59.1
IPR006629	LPS-induced tumour necrosis factor alpha factor	PFAM	PF10601	zf-LITAF-like	coord: 46..110 e-value: 1.0E-12 score: 48.0
IPR006629	LPS-induced tumour necrosis factor alpha factor	PROSITE	PS51837	LITAF	coord: 33..113 score: 11.172
IPR037519	LITAF domain containing protein	PANTHER	PTHR23292	LIPOPOLYSACCHARIDE-INDUCED TRANSCRIPTION FACTOR REGULATING TUMOR NECROSIS FACTOR ALPHA	coord: 19..112
None	No IPR available	PANTHER	PTHR23292:SF6	FI16615P1-RELATED	coord: 19..112

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C06G111120	Cla001489	Watermelon (97103) v1	wmwmbB407
Cla97C06G111120	Csa6G091950	Cucumber (Chinese Long) v2	cuwmbB468
Cla97C06G111120	MELO3C022346	Melon (DHL92) v3.5.1	mewmbB127
Cla97C06G111120	ClCG06G001820	Watermelon (Charleston Gray)	wcgwmbB273
Cla97C06G111120	CSPI06G07460	Wild cucumber (PI 183967)	cpiwmbB495
Cla97C06G111120	Cucsa.349300	Cucumber (Gy14) v1	cgywmbB596
Cla97C06G111120	CmaCh08G000170	Cucurbita maxima (Rimu)	cmawmbB922
Cla97C06G111120	CmaCh17G014120	Cucurbita maxima (Rimu)	cmawmbB369
Cla97C06G111120	CmoCh17G013590	Cucurbita moschata (Rifu)	cmowmbB354
Cla97C06G111120	CmoCh08G000180	Cucurbita moschata (Rifu)	cmowmbB897
Cla97C06G111120	Lsi09G017600	Bottle gourd (USVL1VR-Ls)	lsiwmbB026
Cla97C06G111120	CsGy6G007480	Cucumber (Gy14) v2	cgybwmbB446
Cla97C06G111120	MELO3C022346.2	Melon (DHL92) v3.6.1	medwmbB118
Cla97C06G111120	Carg11571	Silver-seed gourd	carwmbB0011
Cla97C06G111120	Carg03814	Silver-seed gourd	carwmbB1032
Cla97C06G111120	CsaV3_6G007860	Cucumber (Chinese Long) v3	cucwmbB487
Cla97C06G111120	Bhi12G002137	Wax gourd	wgowmbB086

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C06G111120	Silver-seed gourd	carwmbB0721
Cla97C06G111120	Cucurbita moschata (Rifu)	cmowmbB122