Cla97C06G109350 (gene) Watermelon (97103) v2

Overview
NameCla97C06G109350
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionRing finger protein, putative
LocationCla97Chr06 : 109131 .. 110085 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGGTCCGGGTATGAACTTGATTACCACTATTATCGGGTTTGGAATGAGTGCTACATTCATAGTCTTCGTCTGTACAAGAATCATCTGTGGTCGACTTCGTTCATCTCAATCCAATAACCTCAATTATGAGATGGAATCCAGGGTTGATCTTGAGCAGCAAGTAAGAAATAATGTCATCTCTCTTAATCTGGATCTGCACAGTTTTTTTTTTTTGTTTTTTTTTTATTTTTTAATTTTACTTCTAGATCACGAATCCCATGGGTTAATCATCACAAAATGGTGATGTAGCCAACGATTGGAATGATACCATTGTCTTGGCATCTATATGTCAAAATGATGACACTCTTGGTTCTTTATGTTGTTTGATGCCAGCCAGAGTCCCGGGTGAGCGGTCTCGAACCAGTTCTCATAGCTGCTATACCAACGATGAAGTTCGATCGCGAGGCTTTCAGTTCTGTAGAAGATGCTCAGTGAGTACAACTTTTTCAATTCATTAGCATATTAATTGCAGGAGAATAGATAGTTAGGCTTACAGTTGTGTAGAAGATGTTCAGCGGCTGATAGATCATCTAAACTATGGTTCATTGCACTCCACTTGCAGGTGCTCAATCTGTTTGGGTGAGTATGAAGAGAAGGAGGTACTGAGAATAATGCCCAAATGTGGTCACAGTTTTCATCTCACCTGCATCGATGTATGGCTGAGAAAGCAATCTACATGCCCAGTCTGCAGGCTGCCATTGCAAGACTCCTTTACGAGAAAACCTGCAAGACCAATGACAGTGAGCAGAGATCAGTCTTTTGATGGTTCTGAGATTTCAACTGATCATCATTCTCAACATTGGCTTCTACCTGGCCCCAACCGTTCCGAGGGCAACACAAGCAACCAAGCTCAGCTTGAACCCATTCCAGTAAACCCCTCAGTTCAAAGAGAGATGGAAACAATACAATGA

mRNA sequence

ATGACGGGTCCGGGTATGAACTTGATTACCACTATTATCGGGTTTGGAATGAGTGCTACATTCATAGTCTTCGTCTGTACAAGAATCATCTGTGGTCGACTTCGTTCATCTCAATCCAATAACCTCAATTATGAGATGGAATCCAGGGTTGATCTTGAGCAGCAACCAGAGTCCCGGGTGAGCGGTCTCGAACCAGTTCTCATAGCTGCTATACCAACGATGAAGTTCGATCGCGAGGCTTTCAGTTCTGTAGAAGATGCTCAGTGCTCAATCTGTTTGGGTGAGTATGAAGAGAAGGAGGTACTGAGAATAATGCCCAAATGTGGTCACAGTTTTCATCTCACCTGCATCGATGTATGGCTGAGAAAGCAATCTACATGCCCAGTCTGCAGGCTGCCATTGCAAGACTCCTTTACGAGAAAACCTGCAAGACCAATGACAGTGAGCAGAGATCAGTCTTTTGATGGTTCTGAGATTTCAACTGATCATCATTCTCAACATTGGCTTCTACCTGGCCCCAACCGTTCCGAGGGCAACACAAGCAACCAAGCTCAGCTTGAACCCATTCCAGTAAACCCCTCAGTTCAAAGAGAGATGGAAACAATACAATGA

Coding sequence (CDS)

ATGACGGGTCCGGGTATGAACTTGATTACCACTATTATCGGGTTTGGAATGAGTGCTACATTCATAGTCTTCGTCTGTACAAGAATCATCTGTGGTCGACTTCGTTCATCTCAATCCAATAACCTCAATTATGAGATGGAATCCAGGGTTGATCTTGAGCAGCAACCAGAGTCCCGGGTGAGCGGTCTCGAACCAGTTCTCATAGCTGCTATACCAACGATGAAGTTCGATCGCGAGGCTTTCAGTTCTGTAGAAGATGCTCAGTGCTCAATCTGTTTGGGTGAGTATGAAGAGAAGGAGGTACTGAGAATAATGCCCAAATGTGGTCACAGTTTTCATCTCACCTGCATCGATGTATGGCTGAGAAAGCAATCTACATGCCCAGTCTGCAGGCTGCCATTGCAAGACTCCTTTACGAGAAAACCTGCAAGACCAATGACAGTGAGCAGAGATCAGTCTTTTGATGGTTCTGAGATTTCAACTGATCATCATTCTCAACATTGGCTTCTACCTGGCCCCAACCGTTCCGAGGGCAACACAAGCAACCAAGCTCAGCTTGAACCCATTCCAGTAAACCCCTCAGTTCAAAGAGAGATGGAAACAATACAATGA

Protein sequence

MTGPGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDLEQQPESRVSGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLRKQSTCPVCRLPLQDSFTRKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNTSNQAQLEPIPVNPSVQREMETIQ
Homology
[Close]
BLAST of Cla97C06G109350 vs. NCBI nr
Match: XP_004153610.1 (PREDICTED: RING-H2 finger protein ATL5-like [Cucumis sativus] >KGN46203.1 hypothetical protein Csa_6G074560 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 2.8e-104
Identity = 187/203 (92.12%), Postives = 195/203 (96.06%), Query Frame = 0 

Query: 1   MTGPGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDLEQQPESRV 60
           MTG GMNLITT+IGFGMSATFIVFVCTRIICGRLRS+QSN  NYE+ESR+DLEQQPESR 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEPVLIAAIPTM FDREAFSS+EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW
Sbjct: 61  SGLEPVLIAAIPTMTFDREAFSSIEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFTRKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCPVCRLPLQDSF  KPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLEPIPVNPSVQREMETIQ 204
           SNQ+QL+PIPVNP+ QREMETIQ
Sbjct: 181 SNQSQLQPIPVNPAAQREMETIQ 203

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BLAST of Cla97C06G109350 vs. NCBI nr
Match: XP_008460164.1 (PREDICTED: RING-H2 finger protein ATL5-like [Cucumis melo])

HSP 1 Score: 385.6 bits (989), Expect = 1.1e-103
Identity = 186/203 (91.63%), Postives = 194/203 (95.57%), Query Frame = 0 

Query: 1   MTGPGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDLEQQPESRV 60
           MTG GMNLITT+IGFGMSATFIVFVCTRIICGRLRS+QSN  NYE+ESR+DLEQQPESR 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEPVLIAAIPT KFD+EAFSS EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW
Sbjct: 61  SGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFTRKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCP+CRLPLQDSF  KPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLEPIPVNPSVQREMETIQ 204
           SNQ+QL+PIPVNPS QREMETIQ
Sbjct: 181 SNQSQLQPIPVNPSAQREMETIQ 203

[Close]
BLAST of Cla97C06G109350 vs. NCBI nr
Match: XP_022958959.1 (RING-H2 finger protein ATL7-like [Cucurbita moschata])

HSP 1 Score: 378.6 bits (971), Expect = 1.3e-101
Identity = 181/203 (89.16%), Postives = 193/203 (95.07%), Query Frame = 0 

Query: 1   MTGPGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDLEQQPESRV 60
           MTG GMN ITT++GFGMSATFIVF+CTRIICGRLRSSQSN LNYE+ESRVDLEQQPESR 
Sbjct: 1   MTGSGMNFITTVVGFGMSATFIVFICTRIICGRLRSSQSNRLNYEIESRVDLEQQPESRA 60

Query: 61  SGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEPVLIAAIPTMKF+REAF+SVEDAQCSICLGEYEEKEVLR+MPKCGH FH +CIDVW
Sbjct: 61  SGLEPVLIAAIPTMKFNREAFNSVEDAQCSICLGEYEEKEVLRMMPKCGHRFHRSCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFTRKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCP+CRLPLQDS T KPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPICRLPLQDSSTTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLEPIPVNPSVQREMETIQ 204
           SNQ QLE +PVNPSVQRE+ETI+
Sbjct: 181 SNQTQLESVPVNPSVQREIETIR 203

[Close]
BLAST of Cla97C06G109350 vs. NCBI nr
Match: XP_023548050.1 (RING-H2 finger protein ATL7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364.8 bits (935), Expect = 1.9e-97
Identity = 176/203 (86.70%), Postives = 189/203 (93.10%), Query Frame = 0 

Query: 1   MTGPGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDLEQQPESRV 60
           MTG GMN ITT++GFGMSATFIVF+CTRIICGRLRSSQSN+LNYE+ESRVDLEQQP SR 
Sbjct: 1   MTGSGMNFITTVVGFGMSATFIVFICTRIICGRLRSSQSNSLNYEIESRVDLEQQPGSRA 60

Query: 61  SGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLE VLIAAIPTMKF+REAF+SVEDAQCSICLGEYEEKEVLR+MPKCGH FH +CIDVW
Sbjct: 61  SGLEQVLIAAIPTMKFNREAFNSVEDAQCSICLGEYEEKEVLRMMPKCGHRFHRSCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFTRKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCP+CRLPLQ S   KPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPICRLPLQASSRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLEPIPVNPSVQREMETIQ 204
           SNQ QLE +PVN SVQRE+ETI+
Sbjct: 181 SNQTQLESVPVNSSVQREIETIR 203

[Close]
BLAST of Cla97C06G109350 vs. NCBI nr
Match: XP_022156138.1 (putative RING-H2 finger protein ATL69 [Momordica charantia])

HSP 1 Score: 343.2 bits (879), Expect = 6.0e-91
Identity = 169/206 (82.04%), Postives = 185/206 (89.81%), Query Frame = 0 

Query: 1   MTGPGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDLEQQPESRV 60
           MTG GMNL+TT+IGFGMSATFIVFVCTRIICGRLRSS S   NYE+ESR+DLE+QPESR 
Sbjct: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR 60

Query: 61  SGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEPVLIAAIPTMKF+REAFSSVEDAQCSICLG+YEEKEVLRIMPKCGHSFHL+CID W
Sbjct: 61  SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW 120

Query: 121 LRKQSTCPVCRLPLQDSFTRKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCPVCRLPLQ+SF  KP RP+TVSRDQSFD SEISTDHHS+HWL+  P+RSEGNT
Sbjct: 121 LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT 180

Query: 181 SNQA---QLEPIPVNPSVQREMETIQ 204
           S+QA   +  P+PVN SVQREME  Q
Sbjct: 181 SSQAWGLEPVPVPVNSSVQREMEMRQ 206

[Close]
BLAST of Cla97C06G109350 vs. TrEMBL
Match: tr|A0A0A0K9N8|A0A0A0K9N8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G074560 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.8e-104
Identity = 187/203 (92.12%), Postives = 195/203 (96.06%), Query Frame = 0 

Query: 1   MTGPGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDLEQQPESRV 60
           MTG GMNLITT+IGFGMSATFIVFVCTRIICGRLRS+QSN  NYE+ESR+DLEQQPESR 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEPVLIAAIPTM FDREAFSS+EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW
Sbjct: 61  SGLEPVLIAAIPTMTFDREAFSSIEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFTRKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCPVCRLPLQDSF  KPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLEPIPVNPSVQREMETIQ 204
           SNQ+QL+PIPVNP+ QREMETIQ
Sbjct: 181 SNQSQLQPIPVNPAAQREMETIQ 203

[Close]
BLAST of Cla97C06G109350 vs. TrEMBL
Match: tr|A0A1S3CBG3|A0A1S3CBG3_CUCME (RING-H2 finger protein ATL5-like OS=Cucumis melo OX=3656 GN=LOC103499057 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 7.0e-104
Identity = 186/203 (91.63%), Postives = 194/203 (95.57%), Query Frame = 0 

Query: 1   MTGPGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDLEQQPESRV 60
           MTG GMNLITT+IGFGMSATFIVFVCTRIICGRLRS+QSN  NYE+ESR+DLEQQPESR 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEPVLIAAIPT KFD+EAFSS EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW
Sbjct: 61  SGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFTRKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCP+CRLPLQDSF  KPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT
Sbjct: 121 LRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SNQAQLEPIPVNPSVQREMETIQ 204
           SNQ+QL+PIPVNPS QREMETIQ
Sbjct: 181 SNQSQLQPIPVNPSAQREMETIQ 203

[Close]
BLAST of Cla97C06G109350 vs. TrEMBL
Match: tr|A0A067JXT5|A0A067JXT5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14463 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 3.8e-73
Identity = 144/203 (70.94%), Postives = 164/203 (80.79%), Query Frame = 0 

Query: 1   MTGPGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDLEQQPESRV 60
           M G GMNLITT+IGFGMSATFIVFVCTRIICGRLR+S+S  + +E+ESR+DLEQQPE R+
Sbjct: 1   MFGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRASESRQM-FEIESRIDLEQQPEHRI 60

Query: 61  SGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           +GLEPVL+AAIPTMKF REAFSSVEDAQCSICLGEY+EKEVLRIMPKCGH+FHL+CIDVW
Sbjct: 61  NGLEPVLVAAIPTMKFSREAFSSVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFTRKPARPMTVSR-DQSFDGSEISTDHHSQHWLLPGPNRSEGN 180
           LRKQSTCPVCR P++DS   K  R  T+SR  +S D  E S + HSQ WLLPGP RS G 
Sbjct: 121 LRKQSTCPVCRFPVEDSLETKHVRQATLSRMVRSIDSPETSAE-HSQQWLLPGPERSLGT 180

Query: 181 TSNQAQLEPIPVNPS-VQREMET 202
            SNQ     +P NP  V  E +T
Sbjct: 181 ASNQRHAVSVPGNPQLVSAESQT 201

[Close]
BLAST of Cla97C06G109350 vs. TrEMBL
Match: tr|A0A2P5EI44|A0A2P5EI44_9ROSA (43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_190510 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 8.4e-73
Identity = 146/211 (69.19%), Postives = 166/211 (78.67%), Query Frame = 0 

Query: 1   MTGPGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDLEQQPESRV 60
           M G GMNLITT+IGFGMSATFIVFVCTRIICGRLR ++S  + +E+ESR+DLE QPE + 
Sbjct: 1   MVGAGMNLITTVIGFGMSATFIVFVCTRIICGRLRRNESRPM-FEIESRIDLE-QPEHQA 60

Query: 61  SGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEPVL+AAIPTMKF+ EAFSS+ED QCSICLGEY+EKEVLRIMPKCGH+FHL+CIDVW
Sbjct: 61  SGLEPVLVAAIPTMKFNHEAFSSIEDTQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFTRKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQ+TCPVCRLPLQ+SF  K ARP+  +  QSFD SE     HSQ WLLPGP RS GN 
Sbjct: 121 LRKQATCPVCRLPLQESFGTKHARPVMFTTAQSFDESENVPSEHSQQWLLPGPERSVGNN 180

Query: 181 SNQAQ----LEPIPVN----PSVQREMETIQ 204
           SNQ+Q    LE  P      P+   E ET Q
Sbjct: 181 SNQSQRPLELEQSPAGNHSVPTTSGESETRQ 209

[Close]
BLAST of Cla97C06G109350 vs. TrEMBL
Match: tr|A0A2C9WP68|A0A2C9WP68_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G262200 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 5.4e-72
Identity = 138/195 (70.77%), Postives = 161/195 (82.56%), Query Frame = 0 

Query: 1   MTGPGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDLEQQPESRV 60
           M G GMNLITTIIGFGMSATFIVFVCTRIICGR+R+S+S  + +E+ESR+DLE QPE R+
Sbjct: 1   MLGSGMNLITTIIGFGMSATFIVFVCTRIICGRIRASESRQM-FEIESRIDLE-QPEHRI 60

Query: 61  SGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120
           SGLEPVL++AIPTMKF REAFSSVEDAQCSICLGEY+EKEVLRIMPKCGH+FHL+CIDVW
Sbjct: 61  SGLEPVLVSAIPTMKFSREAFSSVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVW 120

Query: 121 LRKQSTCPVCRLPLQDSFTRKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180
           LRKQSTCPVCR P+QDS   K  R   +S  +S D  E ST+ HS+ WLLPG +RS GN 
Sbjct: 121 LRKQSTCPVCRFPIQDSLETKRLRQSAISMVRSIDSPETSTE-HSRQWLLPGSDRSVGNA 180

Query: 181 SNQAQLEPIPVNPSV 196
           S+Q   + +P NP +
Sbjct: 181 SHQRHPDTVPGNPEI 192

[Close]
BLAST of Cla97C06G109350 vs. Swiss-Prot
Match: sp|Q9LF64|ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.1e-17
Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 36  SSQSNNLNYEMESRVDLEQQPESRVSGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGE 95
           SS++ NLN+  E      Q+  +   GL   +I +I   K+ +     V+ + CS+CL E
Sbjct: 90  SSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKY-KSGDGFVDGSDCSVCLSE 149

Query: 96  YEEKEVLRIMPKCGHSFHLTCIDVWLRKQSTCPVCR 132
           +EE E LR++PKC H+FHL CID WL+  S CP+CR
Sbjct: 150 FEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184

[Close]
BLAST of Cla97C06G109350 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-16
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 55  QPESRVSGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHL 114
           Q  S +S L+P ++  IP   +  +   S  + +CS+CL E+EE +  R++PKCGH FH+
Sbjct: 80  QSSSSLSPLDPTVLEKIPIFVYSVKTHESPLE-ECSVCLSEFEEDDEGRVLPKCGHVFHV 139

Query: 115 TCIDVWLRKQSTCPVCRLPLQDSFTRKPARPMT 148
            CID W R +S+CP+CR P+Q      PA+P+T
Sbjct: 140 DCIDTWFRSRSSCPLCRAPVQ------PAQPVT 165

[Close]
BLAST of Cla97C06G109350 vs. Swiss-Prot
Match: sp|Q5XF85|ATL42_ARATH (E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 3.3e-16
Identity = 41/132 (31.06%), Postives = 70/132 (53.03%), Query Frame = 0 

Query: 4   PGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDL----EQQPESR 63
           P + ++T ++    + TF++ V  +     LRS   +   ++   R  +          R
Sbjct: 35  PSLAVVTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDR 94

Query: 64  VSGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDV 123
            SGL+   I ++P  +F      S +   CS+CL ++E  E+LR++PKC H+FH+ CID 
Sbjct: 95  FSGLDKTAIESLPLFRFS-ALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQ 154

Query: 124 WLRKQSTCPVCR 132
           WL + +TCP+CR
Sbjct: 155 WLEQHATCPLCR 165

[Close]
BLAST of Cla97C06G109350 vs. Swiss-Prot
Match: sp|P0C041|ATL53_ARATH (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 7.4e-16
Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 0 

Query: 57  ESRVSGLEPVLIAAIPTMKFDREAFS-SVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLT 116
           ES  +GL+  LI  I   K  +      +    CSICLGE+ E E LR++PKC H+FH+ 
Sbjct: 122 ESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVV 181

Query: 117 CIDVWLRKQSTCPVCRLPLQDSFTRKPARPMTV-------SRDQSFDGSEISTDHHSQ 167
           CID WL+  S CP+CR  +    T++P   + V       S   S +G+ +  DH  +
Sbjct: 182 CIDRWLKSHSNCPLCRAKIIVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVVDDHREE 239

[Close]
BLAST of Cla97C06G109350 vs. Swiss-Prot
Match: sp|Q9SN28|ATL7_ARATH (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.7e-16
Identity = 53/152 (34.87%), Postives = 82/152 (53.95%), Query Frame = 0 

Query: 20  TFIVFVCTRIICGRLRSSQS---NNLNYEMESRVDLEQQPESRVSGLEPVLIAAIPTMKF 79
           TFIV     +I  R  S+ +   ++L     + V       +   GL   +   +P + +
Sbjct: 41  TFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPTNNNLSTAELGLSKDIREMLPVVIY 100

Query: 80  DREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLRKQSTCPVCRLPL-- 139
            +E+F  V+D+QCS+CLG+Y+ +E L+ MP CGH+FH+ CID+WL   +TCP+CRL L  
Sbjct: 101 -KESF-IVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIP 160

Query: 140 QDSFTRKPARPMTVSRDQSFDGSEISTDHHSQ 167
           + S          VS  ++ +G E ST   SQ
Sbjct: 161 KPSLDLSHQSTEIVSSIENSNGGEASTQPDSQ 190

[Close]
BLAST of Cla97C06G109350 vs. TAIR10
Match: AT4G33565.1 (RING/U-box superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 7.5e-19
Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 0 

Query: 59  RVSGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCID 118
           R  GL P +I++I   ++ ++    VE   CS+CL E+EE+E LR++PKC H+FHL CID
Sbjct: 188 RTIGLNPTVISSIKVCQYSKKD-GVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCID 247

Query: 119 VWLRKQSTCPVCRLPLQDSFT 140
            WLR  + CP+CR P+ ++ T
Sbjct: 248 TWLRSHTNCPLCRAPIVEANT 267

[Close]
BLAST of Cla97C06G109350 vs. TAIR10
Match: AT5G17600.1 (RING/U-box superfamily protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.9e-18
Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 36  SSQSNNLNYEMESRVDLEQQPESRVSGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGE 95
           SS++ NLN+  E      Q+  +   GL   +I +I   K+ +     V+ + CS+CL E
Sbjct: 90  SSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKY-KSGDGFVDGSDCSVCLSE 149

Query: 96  YEEKEVLRIMPKCGHSFHLTCIDVWLRKQSTCPVCR 132
           +EE E LR++PKC H+FHL CID WL+  S CP+CR
Sbjct: 150 FEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184

[Close]
BLAST of Cla97C06G109350 vs. TAIR10
Match: AT3G62690.1 (AtL5)

HSP 1 Score: 88.2 bits (217), Expect = 6.4e-18
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 55  QPESRVSGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHL 114
           Q  S +S L+P ++  IP   +  +   S  + +CS+CL E+EE +  R++PKCGH FH+
Sbjct: 80  QSSSSLSPLDPTVLEKIPIFVYSVKTHESPLE-ECSVCLSEFEEDDEGRVLPKCGHVFHV 139

Query: 115 TCIDVWLRKQSTCPVCRLPLQDSFTRKPARPMT 148
            CID W R +S+CP+CR P+Q      PA+P+T
Sbjct: 140 DCIDTWFRSRSSCPLCRAPVQ------PAQPVT 165

[Close]
BLAST of Cla97C06G109350 vs. TAIR10
Match: AT4G28890.1 (RING/U-box superfamily protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-17
Identity = 41/132 (31.06%), Postives = 70/132 (53.03%), Query Frame = 0 

Query: 4   PGMNLITTIIGFGMSATFIVFVCTRIICGRLRSSQSNNLNYEMESRVDL----EQQPESR 63
           P + ++T ++    + TF++ V  +     LRS   +   ++   R  +          R
Sbjct: 35  PSLAVVTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDR 94

Query: 64  VSGLEPVLIAAIPTMKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDV 123
            SGL+   I ++P  +F      S +   CS+CL ++E  E+LR++PKC H+FH+ CID 
Sbjct: 95  FSGLDKTAIESLPLFRFS-ALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQ 154

Query: 124 WLRKQSTCPVCR 132
           WL + +TCP+CR
Sbjct: 155 WLEQHATCPLCR 165

[Close]
BLAST of Cla97C06G109350 vs. TAIR10
Match: AT4G17905.1 (RING/U-box superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-17
Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 0 

Query: 57  ESRVSGLEPVLIAAIPTMKFDREAFS-SVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLT 116
           ES  +GL+  LI  I   K  +      +    CSICLGE+ E E LR++PKC H+FH+ 
Sbjct: 122 ESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVV 181

Query: 117 CIDVWLRKQSTCPVCRLPLQDSFTRKPARPMTV-------SRDQSFDGSEISTDHHSQ 167
           CID WL+  S CP+CR  +    T++P   + V       S   S +G+ +  DH  +
Sbjct: 182 CIDRWLKSHSNCPLCRAKIIVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVVDDHREE 239

The following BLAST results are available for this feature:
BLAST of Cla97C06G109350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004153610.12.8e-10492.12PREDICTED: RING-H2 finger protein ATL5-like [Cucumis sativus] >KGN46203.1 hypoth... [more]
XP_008460164.11.1e-10391.63PREDICTED: RING-H2 finger protein ATL5-like [Cucumis melo][more]
XP_022958959.11.3e-10189.16RING-H2 finger protein ATL7-like [Cucurbita moschata][more]
XP_023548050.11.9e-9786.70RING-H2 finger protein ATL7-like [Cucurbita pepo subsp. pepo][more]
XP_022156138.16.0e-9182.04putative RING-H2 finger protein ATL69 [Momordica charantia][more]
BLAST of Cla97C06G109350 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K9N8|A0A0A0K9N8_CUCSA1.8e-10492.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G074560 PE=4 SV=1[more]
tr|A0A1S3CBG3|A0A1S3CBG3_CUCME7.0e-10491.63RING-H2 finger protein ATL5-like OS=Cucumis melo OX=3656 GN=LOC103499057 PE=4 SV... [more]
tr|A0A067JXT5|A0A067JXT5_JATCU3.8e-7370.94Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14463 PE=4 SV=1[more]
tr|A0A2P5EI44|A0A2P5EI44_9ROSA8.4e-7369.1943kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_190510 PE=... [more]
tr|A0A2C9WP68|A0A2C9WP68_MANES5.4e-7270.77Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G262200 PE=4 SV=... [more]
BLAST of Cla97C06G109350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LF64|ATL52_ARATH5.1e-1741.67RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1[more]
sp|Q9LZJ6|ATL5_ARATH1.1e-1641.94RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1[more]
sp|Q5XF85|ATL42_ARATH3.3e-1631.06E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 ... [more]
sp|P0C041|ATL53_ARATH7.4e-1636.44Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P... [more]
sp|Q9SN28|ATL7_ARATH9.7e-1634.87RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1[more]
BLAST of Cla97C06G109350 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33565.17.5e-1945.68RING/U-box superfamily protein[more]
AT5G17600.12.9e-1841.67RING/U-box superfamily protein[more]
AT3G62690.16.4e-1841.94AtL5[more]
AT4G28890.11.8e-1731.06RING/U-box superfamily protein[more]
AT4G17905.14.1e-1736.44RING/U-box superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044267 cellular protein metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G109350.1Cla97C06G109350.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01197FANCL_C_2coord: 85..139
e-value: 0.006
score: 0.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..203
NoneNo IPR availablePANTHERPTHR14155:SF160SUBFAMILY NOT NAMEDcoord: 5..166
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 5..166
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 88..131
e-value: 1.01219E-16
score: 70.0315
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 80..141
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 89..130
e-value: 8.0E-9
score: 45.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 88..131
e-value: 6.7E-15
score: 55.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 89..131
score: 13.079
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 65..139
e-value: 2.6E-22
score: 79.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C06G109350Cla006928Watermelon (97103) v1wmwmbB407
Cla97C06G109350Csa6G074560Cucumber (Chinese Long) v2cuwmbB468
Cla97C06G109350MELO3C022529Melon (DHL92) v3.5.1mewmbB127
Cla97C06G109350ClCG06G000090Watermelon (Charleston Gray)wcgwmbB273
Cla97C06G109350CSPI06G05530Wild cucumber (PI 183967)cpiwmbB495
Cla97C06G109350Cucsa.363140Cucumber (Gy14) v1cgywmbB625
Cla97C06G109350CmaCh17G000140Cucurbita maxima (Rimu)cmawmbB378
Cla97C06G109350CmoCh08G009010Cucurbita moschata (Rifu)cmowmbB892
Cla97C06G109350CmoCh17G000170Cucurbita moschata (Rifu)cmowmbB362
Cla97C06G109350Lsi09G019330Bottle gourd (USVL1VR-Ls)lsiwmbB026
Cla97C06G109350CsGy6G005470Cucumber (Gy14) v2cgybwmbB446
Cla97C06G109350MELO3C022529.2Melon (DHL92) v3.6.1medwmbB118
Cla97C06G109350Carg10217Silver-seed gourdcarwmbB0231
Cla97C06G109350Carg11109Silver-seed gourdcarwmbB1135
Cla97C06G109350CsaV3_6G005840Cucumber (Chinese Long) v3cucwmbB487
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G109350Watermelon (97103) v2wmbwmbB131
Cla97C06G109350Silver-seed gourdcarwmbB0648
Cla97C06G109350Cucumber (Gy14) v2cgybwmbB218
Cla97C06G109350Cucumber (Gy14) v1cgywmbB454
Cla97C06G109350Cucumber (Gy14) v1cgywmbB455
Cla97C06G109350Cucurbita maxima (Rimu)cmawmbB269
Cla97C06G109350Cucurbita maxima (Rimu)cmawmbB349
Cla97C06G109350Cucurbita maxima (Rimu)cmawmbB864
Cla97C06G109350Cucurbita maxima (Rimu)cmawmbB918
Cla97C06G109350Cucurbita moschata (Rifu)cmowmbB249
Cla97C06G109350Cucurbita moschata (Rifu)cmowmbB334
Cla97C06G109350Cucurbita moschata (Rifu)cmowmbB836
Cla97C06G109350Wild cucumber (PI 183967)cpiwmbB234
Cla97C06G109350Wild cucumber (PI 183967)cpiwmbB243
Cla97C06G109350Cucumber (Chinese Long) v3cucwmbB229
Cla97C06G109350Cucumber (Chinese Long) v3cucwmbB237
Cla97C06G109350Cucumber (Chinese Long) v2cuwmbB227
Cla97C06G109350Bottle gourd (USVL1VR-Ls)lsiwmbB343
Cla97C06G109350Bottle gourd (USVL1VR-Ls)lsiwmbB345
Cla97C06G109350Melon (DHL92) v3.6.1medwmbB439
Cla97C06G109350Melon (DHL92) v3.6.1medwmbB444
Cla97C06G109350Melon (DHL92) v3.5.1mewmbB445
Cla97C06G109350Melon (DHL92) v3.5.1mewmbB449
Cla97C06G109350Watermelon (Charleston Gray)wcgwmbB234
Cla97C06G109350Watermelon (97103) v1wmwmbB214
Cla97C06G109350Watermelon (97103) v1wmwmbB219
Cla97C06G109350Wax gourdwgowmbB622