Cla97C05G105350 (gene) Watermelon (97103) v2

Overview
NameCla97C05G105350
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 32987122 .. 32987523 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAACACTAGTTACATCAATACAAGTCCAGAGTCTTCTTTTGCCCAGCATTTCCATATCCTTGGTAAGAAATGTTCAAGCTTGGACATTTCAACCAATCTCTTGTACTGTATATTGTGCTTCTCCTTCAAAACAGTCACCCTTATTCTCTTGTTTCCTTATGAGCAAGTGGATGGGAATCCTGTGCCTGCTATAATCTTCAAAGGCCTTCCATCAACATTTCATGCCTTTCTACTCTCAATTGTGATGGCATTCTCAGGCGCATTCAACGCCTTGATGCTTGCTACTAATAAGCCAAAAATTGCCAAGTTTTGCAGCTACTATTCTATGGGATTTATGGCTTCAGCTGTAGTTTTATTGTTTTGGGCTGTGTTTCAGACAGTTTTTAACCTGAGATAA

mRNA sequence

ATGAAAAACACTAGTTACATCAATACAAGTCCAGAGTCTTCTTTTGCCCAGCATTTCCATATCCTTGGTAAGAAATGTTCAAGCTTGGACATTTCAACCAATCTCTTGTACTGTATATTGTGCTTCTCCTTCAAAACAGTCACCCTTATTCTCTTGTTTCCTTATGAGCAAGTGGATGGGAATCCTGTGCCTGCTATAATCTTCAAAGGCCTTCCATCAACATTTCATGCCTTTCTACTCTCAATTGTGATGGCATTCTCAGGCGCATTCAACGCCTTGATGCTTGCTACTAATAAGCCAAAAATTGCCAAGTTTTGCAGCTACTATTCTATGGGATTTATGGCTTCAGCTGTAGTTTTATTGTTTTGGGCTGTGTTTCAGACAGTTTTTAACCTGAGATAA

Coding sequence (CDS)

ATGAAAAACACTAGTTACATCAATACAAGTCCAGAGTCTTCTTTTGCCCAGCATTTCCATATCCTTGGTAAGAAATGTTCAAGCTTGGACATTTCAACCAATCTCTTGTACTGTATATTGTGCTTCTCCTTCAAAACAGTCACCCTTATTCTCTTGTTTCCTTATGAGCAAGTGGATGGGAATCCTGTGCCTGCTATAATCTTCAAAGGCCTTCCATCAACATTTCATGCCTTTCTACTCTCAATTGTGATGGCATTCTCAGGCGCATTCAACGCCTTGATGCTTGCTACTAATAAGCCAAAAATTGCCAAGTTTTGCAGCTACTATTCTATGGGATTTATGGCTTCAGCTGTAGTTTTATTGTTTTGGGCTGTGTTTCAGACAGTTTTTAACCTGAGATAA

Protein sequence

MKNTSYINTSPESSFAQHFHILGKKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMASAVVLLFWAVFQTVFNLR
Homology
[Close]
BLAST of Cla97C05G105350 vs. NCBI nr
Match: KGN52009.1 (hypothetical protein Csa_5G607970 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 4.9e-57
Identity = 118/133 (88.72%), Postives = 122/133 (91.73%), Query Frame = 0 

Query: 1   MKNTSYINTSPESSFAQHFHILGKKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDG 60
           MKN   IN SP++ FAQHFHILGK CSSLDISTNLLY ILC SFKTVTLILLFPYEQV+G
Sbjct: 10  MKNRRDINKSPDTCFAQHFHILGKTCSSLDISTNLLYSILCLSFKTVTLILLFPYEQVNG 69

Query: 61  NPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMASAVVL 120
           N VPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYS+GFM SAVVL
Sbjct: 70  NLVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSLGFMVSAVVL 129

Query: 121 LFWAVFQTVFNLR 134
            FWAVFQTVFNLR
Sbjct: 130 FFWAVFQTVFNLR 142

[Close]
BLAST of Cla97C05G105350 vs. NCBI nr
Match: XP_022992466.1 (uncharacterized protein LOC111488762 [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 113/133 (84.96%), Postives = 119/133 (89.47%), Query Frame = 0 

Query: 1   MKNTSYINTSPESSFAQHFHILGKKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDG 60
           MKN   IN SPE+SF QHFHILGK CS LDISTNL+YCILC SFKTVTLILLFPYEQV+G
Sbjct: 39  MKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNG 98

Query: 61  NPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMASAVVL 120
           NPVP IIFKGLPSTFHAFLLS VMAFSGAFNALML+ NKPKIA+FCSYYSM FMASAVVL
Sbjct: 99  NPVPTIIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVL 158

Query: 121 LFWAVFQTVFNLR 134
           L WAV+QTVFN R
Sbjct: 159 LIWAVYQTVFNRR 171

[Close]
BLAST of Cla97C05G105350 vs. NCBI nr
Match: XP_003518808.1 (uncharacterized protein LOC100777541 [Glycine max] >KHN29916.1 hypothetical protein glysoja_014734 [Glycine soja] >KRH71052.1 hypothetical protein GLYMA_02G125900 [Glycine max])

HSP 1 Score: 102.8 bits (255), Expect = 9.0e-19
Identity = 51/97 (52.58%), Postives = 67/97 (69.07%), Query Frame = 0 

Query: 35  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALM 94
           LL C+L   FK +T++L  PYE +D NP+P I+FKG P TFHAF+  I+ AFSGA NAL 
Sbjct: 21  LLECVLGLCFKVITILLQLPYEYIDNNPIPTIVFKGRPRTFHAFITCIIFAFSGATNAL- 80

Query: 95  LATNKPKIAKFCSYYSMGFMASAVVLLFWAVFQTVFN 132
           +A NK + ++ C YY+M  MASA+ +L WAV  T  N
Sbjct: 81  VAFNKSRFSRLCGYYAMASMASALAILLWAVCCTGIN 116

[Close]
BLAST of Cla97C05G105350 vs. NCBI nr
Match: EOY01535.1 (Uncharacterized protein TCM_011399 [Theobroma cacao])

HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18
Identity = 55/112 (49.11%), Postives = 72/112 (64.29%), Query Frame = 0 

Query: 14  SFAQHFHILGKKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPS 73
           +F  H     +  SS+ + T +L  IL  SF   T+++L P+E V G+PVP I+FKG P+
Sbjct: 14  TFYPHHVSFSEMLSSIAVQTTILESILFISFTVATILILLPHEYVKGSPVPIIVFKGHPA 73

Query: 74  TFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMASAVVLLFWAV 126
           TFHAF + I+ AFSGAF ALM   N P+IA  C  YS+  MASA+ LL WAV
Sbjct: 74  TFHAFTICIIFAFSGAFCALM-TPNSPRIASLCGCYSIASMASAIGLLIWAV 124

[Close]
BLAST of Cla97C05G105350 vs. NCBI nr
Match: KRH75196.1 (hypothetical protein GLYMA_01G069000 [Glycine max])

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-18
Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 0 

Query: 35  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALM 94
           LL C+L   F  +T++L  PYE +D NPVP I+FKG P TFHAF++ I+ AFSGA NAL 
Sbjct: 21  LLECVLGICFTVITILLQLPYEYIDNNPVPTIVFKGRPRTFHAFIICIIFAFSGATNAL- 80

Query: 95  LATNKPKIAKFCSYYSMGFMASAVVLLFWAVFQTVFN 132
           +A NK + ++ C YY+M  MASA+ +L WA+  T  N
Sbjct: 81  VAFNKSRFSRLCGYYAMASMASALAILLWALCCTCIN 116

[Close]
BLAST of Cla97C05G105350 vs. TrEMBL
Match: tr|A0A0A0KT20|A0A0A0KT20_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G607970 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.2e-57
Identity = 118/133 (88.72%), Postives = 122/133 (91.73%), Query Frame = 0 

Query: 1   MKNTSYINTSPESSFAQHFHILGKKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDG 60
           MKN   IN SP++ FAQHFHILGK CSSLDISTNLLY ILC SFKTVTLILLFPYEQV+G
Sbjct: 10  MKNRRDINKSPDTCFAQHFHILGKTCSSLDISTNLLYSILCLSFKTVTLILLFPYEQVNG 69

Query: 61  NPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMASAVVL 120
           N VPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYS+GFM SAVVL
Sbjct: 70  NLVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSLGFMVSAVVL 129

Query: 121 LFWAVFQTVFNLR 134
            FWAVFQTVFNLR
Sbjct: 130 FFWAVFQTVFNLR 142

[Close]
BLAST of Cla97C05G105350 vs. TrEMBL
Match: tr|K7K7Z1|K7K7Z1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100777541 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.0e-19
Identity = 51/97 (52.58%), Postives = 67/97 (69.07%), Query Frame = 0 

Query: 35  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALM 94
           LL C+L   FK +T++L  PYE +D NP+P I+FKG P TFHAF+  I+ AFSGA NAL 
Sbjct: 21  LLECVLGLCFKVITILLQLPYEYIDNNPIPTIVFKGRPRTFHAFITCIIFAFSGATNAL- 80

Query: 95  LATNKPKIAKFCSYYSMGFMASAVVLLFWAVFQTVFN 132
           +A NK + ++ C YY+M  MASA+ +L WAV  T  N
Sbjct: 81  VAFNKSRFSRLCGYYAMASMASALAILLWAVCCTGIN 116

[Close]
BLAST of Cla97C05G105350 vs. TrEMBL
Match: tr|A0A061E956|A0A061E956_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_011399 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.8e-19
Identity = 55/112 (49.11%), Postives = 72/112 (64.29%), Query Frame = 0 

Query: 14  SFAQHFHILGKKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPS 73
           +F  H     +  SS+ + T +L  IL  SF   T+++L P+E V G+PVP I+FKG P+
Sbjct: 14  TFYPHHVSFSEMLSSIAVQTTILESILFISFTVATILILLPHEYVKGSPVPIIVFKGHPA 73

Query: 74  TFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMASAVVLLFWAV 126
           TFHAF + I+ AFSGAF ALM   N P+IA  C  YS+  MASA+ LL WAV
Sbjct: 74  TFHAFTICIIFAFSGAFCALM-TPNSPRIASLCGCYSIASMASAIGLLIWAV 124

[Close]
BLAST of Cla97C05G105350 vs. TrEMBL
Match: tr|I1J684|I1J684_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_01G069000 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 0 

Query: 35  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALM 94
           LL C+L   F  +T++L  PYE +D NPVP I+FKG P TFHAF++ I+ AFSGA NAL 
Sbjct: 21  LLECVLGICFTVITILLQLPYEYIDNNPVPTIVFKGRPRTFHAFIICIIFAFSGATNAL- 80

Query: 95  LATNKPKIAKFCSYYSMGFMASAVVLLFWAVFQTVFN 132
           +A NK + ++ C YY+M  MASA+ +L WA+  T  N
Sbjct: 81  VAFNKSRFSRLCGYYAMASMASALAILLWALCCTCIN 116

[Close]
BLAST of Cla97C05G105350 vs. TrEMBL
Match: tr|C6TBT4|C6TBT4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.7e-18
Identity = 49/94 (52.13%), Postives = 65/94 (69.15%), Query Frame = 0 

Query: 38  CILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLAT 97
           C+L   FK +T++L  PYE +D NP+P I+FKG P TFHAF+  I+ AFSGA NAL +A 
Sbjct: 24  CVLGLCFKVITILLQLPYEYIDNNPIPTIVFKGRPRTFHAFITCIIFAFSGATNAL-VAF 83

Query: 98  NKPKIAKFCSYYSMGFMASAVVLLFWAVFQTVFN 132
           NK + ++ C YY+M  MASA+ +L WAV  T  N
Sbjct: 84  NKSRFSRLCGYYAMASMASALAILLWAVCCTGIN 116

The following BLAST results are available for this feature:
BLAST of Cla97C05G105350 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52009.14.9e-5788.72hypothetical protein Csa_5G607970 [Cucumis sativus][more]
XP_022992466.11.6e-5584.96uncharacterized protein LOC111488762 [Cucurbita maxima][more]
XP_003518808.19.0e-1952.58uncharacterized protein LOC100777541 [Glycine max] >KHN29916.1 hypothetical prot... [more]
EOY01535.11.2e-1849.11Uncharacterized protein TCM_011399 [Theobroma cacao][more]
KRH75196.12.0e-1851.55hypothetical protein GLYMA_01G069000 [Glycine max][more]
BLAST of Cla97C05G105350 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KT20|A0A0A0KT20_CUCSA3.2e-5788.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G607970 PE=4 SV=1[more]
tr|K7K7Z1|K7K7Z1_SOYBN6.0e-1952.58Uncharacterized protein OS=Glycine max OX=3847 GN=100777541 PE=4 SV=1[more]
tr|A0A061E956|A0A061E956_THECC7.8e-1949.11Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_011399 PE=4 SV=1[more]
tr|I1J684|I1J684_SOYBN1.3e-1851.55Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_01G069000 PE=4 SV=1[more]
tr|C6TBT4|C6TBT4_SOYBN1.7e-1852.13Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1[more]
BLAST of Cla97C05G105350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G105350 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G105350.1Cla97C05G105350.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C05G105350Cla020331Watermelon (97103) v1wmwmbB207
Cla97C05G105350Csa5G607970Cucumber (Chinese Long) v2cuwmbB383
Cla97C05G105350ClCG05G023400Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G105350CSPI05G24590Wild cucumber (PI 183967)cpiwmbB402
Cla97C05G105350CmaCh04G015670Cucurbita maxima (Rimu)cmawmbB758
Cla97C05G105350CmoCh04G016400Cucurbita moschata (Rifu)cmowmbB729
Cla97C05G105350Lsi04G003270Bottle gourd (USVL1VR-Ls)lsiwmbB284
Cla97C05G105350CsaV3_5G033610Cucumber (Chinese Long) v3cucwmbB398
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G105350Silver-seed gourdcarwmbB0274
Cla97C05G105350Silver-seed gourdcarwmbB0878
Cla97C05G105350Silver-seed gourdcarwmbB1102
Cla97C05G105350Cucumber (Gy14) v2cgybwmbB057
Cla97C05G105350Cucumber (Gy14) v2cgybwmbB365
Cla97C05G105350Cucumber (Gy14) v1cgywmbB158
Cla97C05G105350Cucurbita maxima (Rimu)cmawmbB423
Cla97C05G105350Cucumber (Gy14) v1cgywmbB498
Cla97C05G105350Cucurbita maxima (Rimu)cmawmbB306
Cla97C05G105350Cucurbita moschata (Rifu)cmowmbB288
Cla97C05G105350Cucurbita moschata (Rifu)cmowmbB403
Cla97C05G105350Wild cucumber (PI 183967)cpiwmbB062
Cla97C05G105350Cucumber (Chinese Long) v3cucwmbB058
Cla97C05G105350Bottle gourd (USVL1VR-Ls)lsiwmbB238
Cla97C05G105350Melon (DHL92) v3.6.1medwmbB056
Cla97C05G105350Melon (DHL92) v3.5.1mewmbB060
Cla97C05G105350Watermelon (Charleston Gray)wcgwmbB074
Cla97C05G105350Watermelon (97103) v1wmwmbB373
Cla97C05G105350Wax gourdwgowmbB530