Cla97C05G094130 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATATGCAGCATCCGTCCAAAGTGTTTGCTTATTTTCCAATTCGAGTACTGCCCATTTCCGTTCTTGTTCCACAAATCCTCTGGTCTCGACCAGGCTCTCTGTACGAGCTTCATTGCCAGATAGTGATAATGGCGTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTAATCGAACATTCTTTAACTCTGTGTACTGAACTGTTTATAGTTGAGTTCGGGATGGAATTTTGATAGTATAGCAGTGCTTTTAAACGAAGCAAATTTCCTATCTATTGCTTTCTCTAAAGTGTTCCAAACTCACTCTTAACGTGCGATGGCACTTAATACATTGGTCTCTTTGGCCTTTTGGGTTTGATTGTTCAGGTTGGTTTCGAAATGATTGATAGCATTGCTCAAGCGCAGGGCATTTTGATGAACACAATACAATCCAAAGCTCTGATTGGAATAGGTTAGCCTTTTCTTCCCCGTCTCTGTTATTGAATTGGATTTCCATCGTATGTGGATTTGAAGTTCATTGAGTTTCTTGCATGATCAGTACAGGTTCGATTGGAGAAGTACCAATTTTGTTGGCAAAGCCTCAGACTTACATGAATTTCTGCGGAGAATCGGTTTGTCTACTCATCTCTCTTTTCTTCTTTTGTTTAAGCACGGTGCACAGCATACGGTCGAGTGATGGTTTATTTATGAAGTGAAAGGATCCATACCTTAGTTTGAAGCATAGTATATGAAGCTCAATGAGTTCCTTGTATGACGTTATATTCCTATGGATATATCTTTTGCTTTACTTTGAAACAATGACATAGTATCAATGTCCCAGTTAGATAAGTATGTGGAGAGGAGTTGTGCATGTTTGGATATTTCTTATGCCTTTAGATGTTCTAGTTAACCTTCAAGTTTGTCTGGGAGGCATTGTTATGGAGTCATTTATTTGCACTATGTATGATTTGTTTGACATGTGTTAAAATACTCAAATTACTCATGGTCAAGGTTCATTTAATGAGCAAAGCATTTGTGATGATGGCCTGAAGATACTTGGATTTTTCATTTTTCTAACCCTACTGGTTACATGTACTAGAAAACTCAGTTGACTCCTGTGTTAGATTTCGGATGATGCTATGATATTACATGTACTACCTTATCTGGCTGTATTGATTTGCACCTATTTATATTAGATACATGAAGTTTCATTTCAAAACCAATTGGCAATGAGAGGAATAACTCATCTATCTTATAAACATTGTGAGGTCCCTTGATTTTTCCAATATTAGTTCCTCAACCATAACCACTTTTTAGTTTTTTCAGGTAACCAGACCAGAAAATTTGGATATCATCCTGTTCACTTTCTAACTCTATGTTTTAGCTCTTAAATATCTTAAGGACCCTGCATATCGATGTTTTAATTATATAGCTGCTGATGCTATGAATCTTTCCTTCATTAGTTGAATTATTTTGTCATAATGACTAGAACTAGATAGTTACTCCCTTCACGTCACTTTCTGTTTTAATTTTTATAGGTTGGACCTCTTGCTGCACATTATCAAATACCTTTACGGCACATCTTGTTGGTATGATTTGCAATATCTCTTAGTAATCCTTATTTGTTTAACGTAAAAAATGACTAGATTGTAATGGATATCTGTACATGCTTACCATCGTAGACTTATGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTCCAGCCAAAAGGAGGACATGGCCATCATAATGGGTATGTTTATGAAATATTCTAATTTTGGTTTCGCTTTTATTTTTGTTCTAGTTTTATTGGTACGTCATACTTCCTTTCAATTTTTCTAGCCTTGTTATGGACCTATGTTAATGTTTGGGAATACTTTTGATGTGACGAAAAGTGCTCCCCACTTAAAATCATCATGATTGGGAGTAACATAAAAGTATATTAGGAAAATGTCAAAAGTATTGGAAGTGCTTCATGAGAAAGTTTCTATAGAGTGCTTTTAGTTTTGGCCTAGGTGCTGGACCAAAAAGTACATTTAGGGGATGTTTGGGGCGCTAAGTTGTTGAAGTTTGGAGTTAATATGTTGGAGTTTAGAAGTCTATGTTTGGAGTGCAAGATTGTTTAGTCTAGAGTTAGAGAACATTAGAGGGAGGGAGAGAGAAAGAGGGGAACATGAAGGTCCTTGATAAATGTGCAAACTTCAATAGTAAACAGTGTTGAAGTTGAGTTTTCTAACACCAACTTATAAAGTCAGTGGGCCAAACAAGGTTAAAAACAAATTTAGAAGTGTATAACTAAAAATAAAATTAATTTGTTATTAAGCACCTTCTACTAAACCTTATAATTAAAATATCTTTTTTTTTTTTTTTGGTAAAAAGCACTCTCAAACATCTTTACTGTATTGTATATTTTATTGGAGCATGTAGGAACTTCTTAGACAAGCATGTAGGAACTTCTTAGACAAGCATTTTAAGTCATTAAGAACATTGAAGCTCAATCCAGTATTTCGTATCAAATACACGACAACTTCCCATTGAAGACTTGATGAACTTATTTCATATTAGCAGGTTATAGTTGAGTTGATCGCACATGCATTTGTCTTCTCTTATTTGCCATTCAACTTGGAAGTTGTGTTCTCATATATTCCATTTTATAGTTGAGAAATTTATGGTAGCATGTGCATAAAAAGCTGTTATTGATTTCATTAGTTATACAGGGTGAAGAGTGTAATGGGACATCTGGATGGTCGACGTGAGTTTCCTCGGCTATGCATTGGTATGCATCTCTGTCAACATTAGTTTCAAGATGTTTATTAAGTTTCTACTTCAGGAAGTGTAAACAACTACATTGCTCTTGTGATTACCATCTAGGGATTGGAAACCCACCTGGTACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGGTGAGACTGCCTTTGCATTCTAATACAGTTCTGTTGTGCATTACGCATACGTCGCACCTATACTTGATAACTTTGAAATTGTTCTTGTTTATTTTGAAATATGCTTTGGTTTTTACAACTTTACTTGAACAAATCTGTTCTATAGATTGTACAACTTTGTCCTTGAGTTTTTGATTTTTACGATGTAGCTGGTGGTAGAACACCATTGCTTTGTACAAATTTTTATGACTGTTGTTTGTTCAACCCAACAGATCGATGCAGCCCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTCAACAGATTCAATTTGACCCAGAAATACAAGTATCATAAGGTTTGA ATGTTATATGCAGCATCCGTCCAAAGTGTTTGCTTATTTTCCAATTCGAGTACTGCCCATTTCCGTTCTTGTTCCACAAATCCTCTGGTCTCGACCAGGCTCTCTGTACGAGCTTCATTGCCAGATAGTGATAATGGCGTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTTGGTTTCGAAATGATTGATAGCATTGCTCAAGCGCAGGGCATTTTGATGAACACAATACAATCCAAAGCTCTGATTGGAATAGGTTCGATTGGAGAAGTACCAATTTTGTTGGCAAAGCCTCAGACTTACATGAATTTCTGCGGAGAATCGGTTGGACCTCTTGCTGCACATTATCAAATACCTTTACGGCACATCTTGTTGACTTATGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTCCAGCCAAAAGGAGGACATGGCCATCATAATGGGGTGAAGAGTGTAATGGGACATCTGGATGGTCGACGTGAGTTTCCTCGGCTATGCATTGGGATTGGAAACCCACCTGGTACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGATCGATGCAGCCCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTCAACAGATTCAATTTGACCCAGAAATACAAGTATCATAAGGTTTGA ATGTTATATGCAGCATCCGTCCAAAGTGTTTGCTTATTTTCCAATTCGAGTACTGCCCATTTCCGTTCTTGTTCCACAAATCCTCTGGTCTCGACCAGGCTCTCTGTACGAGCTTCATTGCCAGATAGTGATAATGGCGTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTTGGTTTCGAAATGATTGATAGCATTGCTCAAGCGCAGGGCATTTTGATGAACACAATACAATCCAAAGCTCTGATTGGAATAGGTTCGATTGGAGAAGTACCAATTTTGTTGGCAAAGCCTCAGACTTACATGAATTTCTGCGGAGAATCGGTTGGACCTCTTGCTGCACATTATCAAATACCTTTACGGCACATCTTGTTGACTTATGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTCCAGCCAAAAGGAGGACATGGCCATCATAATGGGGTGAAGAGTGTAATGGGACATCTGGATGGTCGACGTGAGTTTCCTCGGCTATGCATTGGGATTGGAAACCCACCTGGTACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGATCGATGCAGCCCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTCAACAGATTCAATTTGACCCAGAAATACAAGTATCATAAGGTTTGA MLYAASVQSVCLFSNSSTAHFRSCSTNPLVSTRLSVRASLPDSDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYHKV
BLAST of Cla97C05G094130 vs. NCBI nr
Match: XP_008461557.1 (PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucumis melo]) HSP 1 Score: 482.6 bits (1241), Expect = 7.8e-133 Identity = 241/250 (96.40%), Postives = 243/250 (97.20%), Query Frame = 0
BLAST of Cla97C05G094130 vs. NCBI nr
Match: XP_004145630.1 (PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucumis sativus] >KGN57706.1 hypothetical protein Csa_3G257600 [Cucumis sativus]) HSP 1 Score: 471.5 bits (1212), Expect = 1.8e-129 Identity = 234/249 (93.98%), Postives = 240/249 (96.39%), Query Frame = 0
BLAST of Cla97C05G094130 vs. NCBI nr
Match: XP_023523313.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 467.6 bits (1202), Expect = 2.6e-128 Identity = 232/248 (93.55%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of Cla97C05G094130 vs. NCBI nr
Match: XP_022148094.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Momordica charantia]) HSP 1 Score: 466.8 bits (1200), Expect = 4.4e-128 Identity = 232/248 (93.55%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of Cla97C05G094130 vs. NCBI nr
Match: XP_022998092.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 465.3 bits (1196), Expect = 1.3e-127 Identity = 231/248 (93.15%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of Cla97C05G094130 vs. TrEMBL
Match: tr|A0A1S3CFG5|A0A1S3CFG5_CUCME (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500129 PE=3 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 5.2e-133 Identity = 241/250 (96.40%), Postives = 243/250 (97.20%), Query Frame = 0
BLAST of Cla97C05G094130 vs. TrEMBL
Match: tr|A0A0A0LCC6|A0A0A0LCC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257600 PE=3 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 1.2e-129 Identity = 234/249 (93.98%), Postives = 240/249 (96.39%), Query Frame = 0
BLAST of Cla97C05G094130 vs. TrEMBL
Match: tr|A0A061EH51|A0A061EH51_THECC (Peptidyl-tRNA hydrolase family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_019422 PE=3 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 8.0e-110 Identity = 199/248 (80.24%), Postives = 217/248 (87.50%), Query Frame = 0
BLAST of Cla97C05G094130 vs. TrEMBL
Match: tr|A0A2P4HPJ6|A0A2P4HPJ6_QUESU (Chloroplastic group iib intron splicing facilitator crs2-b, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_40792 PE=3 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 1.4e-109 Identity = 199/250 (79.60%), Postives = 217/250 (86.80%), Query Frame = 0
BLAST of Cla97C05G094130 vs. TrEMBL
Match: tr|A0A2P4HPK1|A0A2P4HPK1_QUESU (Chloroplastic group iib intron splicing facilitator crs2-b, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_40792 PE=3 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 1.4e-109 Identity = 199/250 (79.60%), Postives = 217/250 (86.80%), Query Frame = 0
BLAST of Cla97C05G094130 vs. Swiss-Prot
Match: sp|Q9LF14|CRS2B_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2B PE=2 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 2.3e-96 Identity = 165/205 (80.49%), Postives = 186/205 (90.73%), Query Frame = 0
BLAST of Cla97C05G094130 vs. Swiss-Prot
Match: sp|Q9FKN4|CRS2A_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2A PE=2 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 1.1e-90 Identity = 162/215 (75.35%), Postives = 182/215 (84.65%), Query Frame = 0
BLAST of Cla97C05G094130 vs. Swiss-Prot
Match: sp|Q9M5P4|CRS2_MAIZE (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays OX=4577 GN=CRS2 PE=1 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 7.3e-90 Identity = 162/231 (70.13%), Postives = 188/231 (81.39%), Query Frame = 0
BLAST of Cla97C05G094130 vs. Swiss-Prot
Match: sp|Q5ZCL8|CRS2_ORYSJ (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0132800 PE=2 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 4.0e-88 Identity = 155/216 (71.76%), Postives = 181/216 (83.80%), Query Frame = 0
BLAST of Cla97C05G094130 vs. Swiss-Prot
Match: sp|Q6NLS8|PTHM_ARATH (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19830 PE=2 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 3.6e-65 Identity = 115/197 (58.38%), Postives = 148/197 (75.13%), Query Frame = 0
BLAST of Cla97C05G094130 vs. TAIR10
Match: AT5G16140.1 (Peptidyl-tRNA hydrolase family protein) HSP 1 Score: 353.2 bits (905), Expect = 1.3e-97 Identity = 165/205 (80.49%), Postives = 186/205 (90.73%), Query Frame = 0
BLAST of Cla97C05G094130 vs. TAIR10
Match: AT5G38290.2 (Peptidyl-tRNA hydrolase family protein) HSP 1 Score: 334.3 bits (856), Expect = 6.2e-92 Identity = 162/215 (75.35%), Postives = 182/215 (84.65%), Query Frame = 0
BLAST of Cla97C05G094130 vs. TAIR10
Match: AT5G19830.1 (Peptidyl-tRNA hydrolase family protein) HSP 1 Score: 249.6 bits (636), Expect = 2.0e-66 Identity = 115/197 (58.38%), Postives = 148/197 (75.13%), Query Frame = 0
BLAST of Cla97C05G094130 vs. TAIR10
Match: AT1G18440.1 (Peptidyl-tRNA hydrolase family protein) HSP 1 Score: 238.4 bits (607), Expect = 4.6e-63 Identity = 109/200 (54.50%), Postives = 144/200 (72.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|