Csa3G257600 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G257600
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Peptidyl-tRNA hydrolase, putative; contains IPR001328 (Peptidyl-tRNA hydrolase)
Location	Chr3 : 15966197 .. 15970269 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTATGTGGGATTTCTACATTCTATCCAAAGAAACCAAGAAGCCCCTCCTTCCTCGTTAGGGAGCTTTGTGTGTGAGTGTGTTCAATTTCTCTTCAGTTTCTTCTACGGCTTTAACAACATCCTCCACTTCTTCTGCTCGAAAATCCACTCTTCTTTTTACCAAACCATCCAATTTGCACGCAGGTTCAGTATTTTATTTTCTTCTTCGTCTTCTTCGCTTTCCTACCCTTTGCTTTCGCTTTTCCCATTTAAAGTTCAACGAAACAACATGGTTCTTCAAGGGTTTTCTTTTTCCTGCTTTAGGTTTCAATGTTATTTGCAGCATCCTTCCAAAGTGTCTCCTTATTTTCTAATTCGAGTAGTGCCCATTTCCATTTTCCTTCCACAAAGCCTCTGGTCTCCACCAGGCTCTCCGTACGAGCTTCATCGCCGGATAGTGATAGTAATGGTCTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTAATCAGACATTCTTTAACTCTGTGTAATGAACTTTTTTGAATGAGTTTGGGATGGACTTTTCATAGTTTAGCAGTACTTTTAATTTAAACCAATCAAATTTCCTATCTAGTGCTTTCTATGAAGTGTTCCAAACTCACCATCTCTTAACGTGCAGTGACACTAAGTAACATTGCTCTTTTTGGCCTCTTGGGTTTGATTGGTCAGGTTGGTTTTGAAATGATTGATAGCATTGCTCAAGCGCAGGGAATTTTGATGAACACAATACAATCCAAAGCTCTAATTGGAATAGGTTGGCTTGTTTTCCCCTTCTATGTTATTGAATTGGGTTTCCATGTTACGTGGATTTGAAGTTCATTATGTTTCTTGAATAATCAGTACAGGTTCAATCGGAGAAGTACCAATTTTATTGGCAAAGCCTCAAACTTACATGAATTTCTGTGGAGAATCGGTTTGTCCTCTTGTCTCTCTTTTCTTCTGTTATTCAATAAGCATGGCACACAGCATACAGTTGAATGATGGTTTGTTTATATCTGAAGTGTATGGATCCAAAGCTTAGTTTGAAGCAAAATAAGCTCACCGAGCTCCTTGTATGACCTTATATTCATAGGGATAGATTGTTAGTTTCTTTCCATTGAAGCAATGACATAGCATTAATATCGCATTTTGATAAGTATGTGGACAGGAGTTCTGTGGGTTTGGATATGTTTTACGCCTTTAGATGTTCTACTTAACCTTCAATTTTGTCTGAGTGTGATTGTTAGAGGCCCAAAGTCAACTGTGATTTGCTCGAAGTGAACTAAATCTCTGATTGGATAGGTTTATTGTGATGATGGTCTGAAGATACTTAGTTTTTTCATTTTTCTAACCTTGCTGGTTACATATACTAGAAAACTCAGTTGATTCCTGTATTAGATTTTGGATGAGGCTATAATATTGTCATTCCTACAATATCTGGCTGTATTTATTTGCACCACTTTATACCTATGCACTCTATAGCGTTTTGTGGTAGAGCTTTGTTGTTTAGTAGCTGAGGATAAAAACAAATTCTTTGAGGAAACCATTGTGATTGAACTATAACGTGGTTATTGTTGCCATCTACAAATAATTTACATGATCTTATTAAATACATGGGGTTTTCTTCTCAAAATCAACTGGTAATGAGAGAAGTAACTCATCTATTTTATAAATAAATAAATGTTGCGAGTGTCCCTTGACTTGTTCAATGCTGAATCCTCAAGATGTCCCCTCAAGATGAATCTTTGGATTCACCATTCTAGAATCAAATTCAATGTTTTGTTTCCGGATTGAATATTGAATGCTCGTTTGGCTTAATAAGCTACAATAGCCAATTAGATACATGGAATTTTATCTCAAAATCATTTGGCAATGTTATGAGTAGTTGATCTCAATATCTTAAGAACCCTGCACATGGATGTTTTGTTCTACAGCTGCTAATACTATGAATCTTTCCTTCATCATTTGAATTATTTTTCCATAATGACGAGATAGTTATTCCCTTCACATGACTTTCTGCTTAAATTTTATAGGTTGGACCTCTTGCTGCACATTACCAAATACCTTTACGGCATGTCTTGTTGGTATAGTTTGCAATTTCTCCTAGTAATTCTTATGTTACTGTACAAAATGACTAGATTGAATGGAATTCTGTACATGCTTACCATTGTAGACTTATGATGAAATGAACTTGCCAAATGGCGTTCTTAGGCTGCAGCCAAAAGCAGGACATGGCCATCATAATGGGTAGGTTTATGAAATATTATTTAATATCGGTTTCACCTTTATTTTTGTTCTAGTTTTAATTGATACCTCATACTTTCAATTTTTCTAACCTTGTTATGTTGTTGTTATGTACCTATGGTAATGTTTGGAAGTACTTTTGATATCACCACAAGTGGTTCTCACTTAAAATCATCATGCTTGAGAGTAACATAAAAGTACATTAGGAAAATGTCAAAAGTATATAAAGGGCTTCACGAGAAAGTTTCTACAGAGTGCTTTTGGCCCAATTGCTGGACCAGCAAGCACACTTGACAACAAATTAAAAAATGTAGAACTAAAAATAAAATTAGTTTGTAATTTAGCACCTTCTACTGAAGGCCTTATATTAAAATATCTTTTTAAAAGCACTCTCAAACATATATTTTATTGGGGCATGTGTTGGAACTTCTTTGACAAGCTTATTACATCATTAAGAAAATTGAAGCTCAATGGACTATTTCTTGTCGAATACCCACCAACTTCTCACTGAAGACTGTTAGGCCCCCTATTATTCACACATACAAATGAAGGGGCACAAAAGGTAATAACCAGGTGACAGCTTAACCTATGAGGATTGAGGAATATGTTGCTGTGGGACCCATGGGAAGGGATGGGAGTATATAAAGGAATGTTTTTGGGATTGCTGAAGGTAGGTCATATTTTGAGAAAAATTGCGGAAAGTTTGGAGGAGAAGGCCAGCATTCTTGAATTAGCTGGAGAGTCTTTCCTTTTATATTTTGACATTTCTTGTGTTATTTTCTGCTGTTTAGAGGATATCTACATGAACCTTGTTTCCGACTCTATTTCTATCAATATATAAATATAGAGTACTGTCTCTGTTCCTCTATTGTGTTGTTCTATTGTGTGTTGGGACGTTTCTGAGTGGCAGGTTTTTGGGATCCTAACAAAGACAAGGTGTTTCATATTAGCATTTTATAGTTGATTTGATTGGACATGCATTTTCCTTCGCTTATTTGCCATTCAACATGGAAGTCATGTTCTTCTCTTATTTGTTATGAAGAAATTTATGGCACCATGTGCATAAAAAGTTGTTATTGATTACATTAGTTATACAGGGTGAAGAGTGTAATGGGACACCTGGATGGTCGACGTGAGTTTCCTCGGCTATGCATCGGTACGCATCTTGGTTAACATTAGTTTGAAAATGTTCATTAAGTTTCTACTTCAGGAAGTGTAAACAACGACATTGCTCTTGTTATTACTATATCTAGGAATTGGAAACCCACCTGGGACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGGTGAGACTTCCTTTGCATTCTAATACAGTTCCACTCTGCATTAGTTTATATGTCGCAGCCTGATGACCTCGAAGCTGTACTTGCCTGGTGGTAGAACACTATTGCTTAGTGCGTTTTTCTTTTTTGACTTTTGTTTGTGCAACCCAACAGATCGATGCAGCTCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTAAACAGATTCAATTTGTCCCAGAAATACAAGTATCATAAGGTTTGAACCTCAGGAAAAGAAAGTTGTAGTTTTGATCATATTGGTAAGTGATAATGAACTCTGATAAAAATGAAGTGTAGGACTGGATATATAATTAAATTAATTGTATTTGATCATGTGAGTTAGCTACAATGGTTGACTACTTGCTGTTCTAAGCAGATCAATTCACAGGAAGATAATCTAATACCCA

mRNA sequence

ATGTTATTTGCAGCATCCTTCCAAAGTGTCTCCTTATTTTCTAATTCGAGTAGTGCCCATTTCCATTTTCCTTCCACAAAGCCTCTGGTCTCCACCAGGCTCTCCGTACGAGCTTCATCGCCGGATAGTGATAGTAATGGTCTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTTGGTTTTGAAATGATTGATAGCATTGCTCAAGCGCAGGGAATTTTGATGAACACAATACAATCCAAAGCTCTAATTGGAATAGGTTCAATCGGAGAAGTACCAATTTTATTGGCAAAGCCTCAAACTTACATGAATTTCTGTGGAGAATCGGTTGGACCTCTTGCTGCACATTACCAAATACCTTTACGGCATGTCTTGTTGACTTATGATGAAATGAACTTGCCAAATGGCGTTCTTAGGCTGCAGCCAAAAGCAGGACATGGCCATCATAATGGGGTGAAGAGTGTAATGGGACACCTGGATGGTCGACGTGAGTTTCCTCGGCTATGCATCGGAATTGGAAACCCACCTGGGACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGATCGATGCAGCTCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTAAACAGATTCAATTTGTCCCAGAAATACAAGTATCATAAGGTTTGA

Coding sequence (CDS)

ATGTTATTTGCAGCATCCTTCCAAAGTGTCTCCTTATTTTCTAATTCGAGTAGTGCCCATTTCCATTTTCCTTCCACAAAGCCTCTGGTCTCCACCAGGCTCTCCGTACGAGCTTCATCGCCGGATAGTGATAGTAATGGTCTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTTGGTTTTGAAATGATTGATAGCATTGCTCAAGCGCAGGGAATTTTGATGAACACAATACAATCCAAAGCTCTAATTGGAATAGGTTCAATCGGAGAAGTACCAATTTTATTGGCAAAGCCTCAAACTTACATGAATTTCTGTGGAGAATCGGTTGGACCTCTTGCTGCACATTACCAAATACCTTTACGGCATGTCTTGTTGACTTATGATGAAATGAACTTGCCAAATGGCGTTCTTAGGCTGCAGCCAAAAGCAGGACATGGCCATCATAATGGGGTGAAGAGTGTAATGGGACACCTGGATGGTCGACGTGAGTTTCCTCGGCTATGCATCGGAATTGGAAACCCACCTGGGACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGATCGATGCAGCTCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTAAACAGATTCAATTTGTCCCAGAAATACAAGTATCATAAGGTTTGA

Protein sequence

MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV*

Homology

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BLAST of Csa3G257600 vs. Swiss-Prot
Match: CRS2B_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 5.2e-96
Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 1


Query: 21  FHFPSTKPLV-STRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 80
           +HF + KP+    R  V +S+   + +  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI
Sbjct: 11  YHFQTQKPVFRKQRFRVCSSTSGGEDDRFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 70

Query: 81  DSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHV 140
           D +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRH+
Sbjct: 71  DVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHI 130

Query: 141 LLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF 200
           L+ YDEM LPNGVLRLQPK G G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAF
Sbjct: 131 LMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAF 190

Query: 201 LLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 250
           LLQKFS +E+KQI+ ALEQG EAV+TL LNGF+Q ++RFNL QKYK+HKV
Sbjct: 191 LLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

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BLAST of Csa3G257600 vs. Swiss-Prot
Match: CRS2A_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.6e-89
Identity = 162/229 (70.74%), Postives = 182/229 (79.48%), Query Frame = 1


Query: 21  FHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID 80
           + F  TK       S+RAS P SD+  LK EYTPWLIVGLGNPG KY+GTRHN+GFEMID
Sbjct: 18  YKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMID 77

Query: 81  SIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVL 140
            IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQIPLRH+L
Sbjct: 78  HIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHIL 137

Query: 141 LTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL 200
           + YD+M L NGVLRLQPK GH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFL
Sbjct: 138 MIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFL 197

Query: 201 LQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 250
           LQKFS +ERKQ+D  LEQGVE V+TL   GFS  ++RFNL QKYK+HKV
Sbjct: 198 LQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

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BLAST of Csa3G257600 vs. Swiss-Prot
Match: CRS2_MAIZE (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 4.4e-87
Identity = 165/256 (64.45%), Postives = 193/256 (75.39%), Query Frame = 1


Query: 1   MLFAASFQSVSLFSNSSSAHFHFPS---TKPLVSTR----LSVRASSPDSDSNGLKVEYT 60
           +L AA   + S FS      F  P    T PL   R     +V +S PD  +    VEYT
Sbjct: 3   LLAAAIPSTSSHFSAPFLPSFRMPRKSLTAPLHRIRRPRPFTVVSSVPDPAAG--PVEYT 62

Query: 61  PWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAK 120
           PWLI GLGNPGNKY+GTRHNVGFEM+D IA  +GI MNTIQSK+L+GIGSIGEVP+L+ K
Sbjct: 63  PWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVK 122

Query: 121 PQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGH 180
           PQ+YMN+ GE++GPLAA+YQ+PLRH+LL YD+ +LPNGVLRLQ K GHG HNG+++V+ H
Sbjct: 123 PQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 182

Query: 181 LDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQ 240
           LDGRREFPRL IGIG+PPG MD +AFLLQKFSS ER QID ALEQGV+AVRTL L GFS 
Sbjct: 183 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSG 242

Query: 241 RVNRFNLSQKYKYHKV 250
              RFNL QKYK+H+V
Sbjct: 243 STERFNLVQKYKFHRV 256

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BLAST of Csa3G257600 vs. Swiss-Prot
Match: CRS2_ORYSJ (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0132800 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.8e-85
Identity = 153/226 (67.70%), Postives = 181/226 (80.09%), Query Frame = 1


Query: 24  PSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIA 83
           P  +  +  R++V AS PD  +     EYTPWLI GLGNPG+KYHGTRHNVGFEM+D IA
Sbjct: 36  PLRRTRLRRRIAVVASVPDPAAR--PAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIA 95

Query: 84  QAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTY 143
           + +GI MNTIQSK+L+GIGSIGEVP+LL KPQ+Y+N+ GE++GPLAA+YQ+PLRH+L+ Y
Sbjct: 96  RDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMY 155

Query: 144 DEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQK 203
           DEM+LPNGVLRLQ K GHG HNG+++VM  LD  RE PRL IGIG+PPG MD +AFLLQK
Sbjct: 156 DEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQK 215

Query: 204 FSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 250
           FSS ER QID ALEQGV+AVRTL L GFS  + RFNL QKYK+H V
Sbjct: 216 FSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259

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BLAST of Csa3G257600 vs. Swiss-Prot
Match: PTHM_ARATH (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.5e-63
Identity = 115/197 (58.38%), Postives = 145/197 (73.60%), Query Frame = 1


Query: 52  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL 111
           + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + ++P++L
Sbjct: 16  HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75

Query: 112 AKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVM 171
           AKPQTYMN  GES GPLAA+Y++PL  VL+ +D+M LP GVLRLQ K GHG HNG+KSVM
Sbjct: 76  AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135

Query: 172 GHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGF 231
            H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +    F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195

Query: 232 SQRVNRFNLSQKYKYHK 249
            +    FN+ QKYK+ K
Sbjct: 196 GESWRLFNVEQKYKHLK 212

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BLAST of Csa3G257600 vs. TrEMBL
Match: A0A0A0LCC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G257600 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 1.5e-139
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1


Query: 1   MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGL 60
           MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGL
Sbjct: 1   MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGL 60

Query: 61  GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 120
           GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF
Sbjct: 61  GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 120

Query: 121 CGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREF 180
           CGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREF
Sbjct: 121 CGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREF 180

Query: 181 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL 240
           PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL
Sbjct: 181 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL 240

Query: 241 SQKYKYHKV 250
           SQKYKYHKV
Sbjct: 241 SQKYKYHKV 249

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BLAST of Csa3G257600 vs. TrEMBL
Match: A0A061EHT4_THECC (Peptidyl-tRNA hydrolase family protein isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_019422 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.9e-105
Identity = 186/219 (84.93%), Postives = 203/219 (92.69%), Query Frame = 1


Query: 31  STRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILM 90
           STRL VRAS PD++ +G KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID I+Q +GI +
Sbjct: 5   STRLCVRASLPDNN-DGFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDQISQVEGIAL 64

Query: 91  NTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPN 150
           NTIQSKALIG+G+IGEVPILLAKPQ YMNFCGESVGPLAA+YQ+PLRH+LL YDEM+LPN
Sbjct: 65  NTIQSKALIGLGAIGEVPILLAKPQAYMNFCGESVGPLAAYYQVPLRHILLIYDEMSLPN 124

Query: 151 GVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERK 210
           GVLRLQPK GHGHHNGVKSVMGHLDG REFPRLCIGIGNPPG+MDMKA+LLQKFSSVER 
Sbjct: 125 GVLRLQPKGGHGHHNGVKSVMGHLDGCREFPRLCIGIGNPPGSMDMKAYLLQKFSSVERN 184

Query: 211 QIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 250
           QIDAALEQGVEAVRT+ LNGFS ++ RFNL QKYKYHKV
Sbjct: 185 QIDAALEQGVEAVRTIVLNGFSHKITRFNLGQKYKYHKV 222

[Close]

BLAST of Csa3G257600 vs. TrEMBL
Match: A0A061EH51_THECC (Peptidyl-tRNA hydrolase family protein isoform 1 OS=Theobroma cacao GN=TCM_019422 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.9e-105
Identity = 186/219 (84.93%), Postives = 203/219 (92.69%), Query Frame = 1


Query: 31  STRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILM 90
           STRL VRAS PD++ +G KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID I+Q +GI +
Sbjct: 27  STRLCVRASLPDNN-DGFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDQISQVEGIAL 86

Query: 91  NTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPN 150
           NTIQSKALIG+G+IGEVPILLAKPQ YMNFCGESVGPLAA+YQ+PLRH+LL YDEM+LPN
Sbjct: 87  NTIQSKALIGLGAIGEVPILLAKPQAYMNFCGESVGPLAAYYQVPLRHILLIYDEMSLPN 146

Query: 151 GVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERK 210
           GVLRLQPK GHGHHNGVKSVMGHLDG REFPRLCIGIGNPPG+MDMKA+LLQKFSSVER 
Sbjct: 147 GVLRLQPKGGHGHHNGVKSVMGHLDGCREFPRLCIGIGNPPGSMDMKAYLLQKFSSVERN 206

Query: 211 QIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 250
           QIDAALEQGVEAVRT+ LNGFS ++ RFNL QKYKYHKV
Sbjct: 207 QIDAALEQGVEAVRTIVLNGFSHKITRFNLGQKYKYHKV 244

[Close]

BLAST of Csa3G257600 vs. TrEMBL
Match: B9H311_POPTR (Peptidyl-tRNA hydrolase family protein OS=Populus trichocarpa GN=POPTR_0004s09730g PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 5.5e-105
Identity = 194/249 (77.91%), Postives = 213/249 (85.54%), Query Frame = 1


Query: 1   MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGL 60
           ML+A S     + S   S+ FH    + LVS RL VRAS PD ++NG+KVEYTPWLIVGL
Sbjct: 1   MLYAVSTPRTCI-SCPRSSRFH---RRNLVSVRLCVRASLPD-NANGVKVEYTPWLIVGL 60

Query: 61  GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 120
           GNPG KYHGTRHNVGFEMID IAQA+G+LMNTIQSKALIGIG IGEVPILLAKPQ YMNF
Sbjct: 61  GNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNF 120

Query: 121 CGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREF 180
            GESVGPLAAHY+IPLRH+LL YDEMNLPNG+LR+QPK GHGHHNGVKSVM HLDG REF
Sbjct: 121 SGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREF 180

Query: 181 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL 240
           PRLCIGIGNPPGTMDMKAFLLQKFS  ER+QIDA+LEQGVEA+RTL L GF+ ++ RFNL
Sbjct: 181 PRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNL 240

Query: 241 SQKYKYHKV 250
            QKYKYHKV
Sbjct: 241 GQKYKYHKV 244

[Close]

BLAST of Csa3G257600 vs. TrEMBL
Match: A0A068U3A3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040260001 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 4.4e-102
Identity = 182/221 (82.35%), Postives = 200/221 (90.50%), Query Frame = 1


Query: 29  LVSTRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGI 88
           L  TRL V AS P+S  +G+KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID I+QA+GI
Sbjct: 27  LAPTRLRVSASLPES--HGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDCISQAEGI 86

Query: 89  LMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNL 148
           +MNTIQSKAL+GIGSIGEVP+LLAKPQ YMN+ GESVGPLAA+Y++PLRH+LL YDEM+L
Sbjct: 87  VMNTIQSKALVGIGSIGEVPVLLAKPQAYMNYSGESVGPLAAYYRVPLRHILLVYDEMSL 146

Query: 149 PNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVE 208
           PNGVLRLQPK GHGHHNGVKSVM HLDGRREFPR CIGIGNPPGTMDMKAFLLQKFS+VE
Sbjct: 147 PNGVLRLQPKGGHGHHNGVKSVMEHLDGRREFPRFCIGIGNPPGTMDMKAFLLQKFSTVE 206

Query: 209 RKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 250
           R+QIDAALEQGVEAVR L   GF+ R+ RFNL QKYKYHKV
Sbjct: 207 REQIDAALEQGVEAVRALIQEGFNSRITRFNLGQKYKYHKV 245

[Close]

BLAST of Csa3G257600 vs. TAIR10
Match: AT5G16140.1 (AT5G16140.1 Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 352.1 bits (902), Expect = 2.9e-97
Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 1


Query: 21  FHFPSTKPLV-STRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 80
           +HF + KP+    R  V +S+   + +  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI
Sbjct: 11  YHFQTQKPVFRKQRFRVCSSTSGGEDDRFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 70

Query: 81  DSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHV 140
           D +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRH+
Sbjct: 71  DVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHI 130

Query: 141 LLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF 200
           L+ YDEM LPNGVLRLQPK G G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAF
Sbjct: 131 LMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAF 190

Query: 201 LLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 250
           LLQKFS +E+KQI+ ALEQG EAV+TL LNGF+Q ++RFNL QKYK+HKV
Sbjct: 191 LLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]

BLAST of Csa3G257600 vs. TAIR10
Match: AT5G38290.2 (AT5G38290.2 Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 330.5 bits (846), Expect = 9.1e-91
Identity = 162/229 (70.74%), Postives = 182/229 (79.48%), Query Frame = 1


Query: 21  FHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID 80
           + F  TK       S+RAS P SD+  LK EYTPWLIVGLGNPG KY+GTRHN+GFEMID
Sbjct: 22  YKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMID 81

Query: 81  SIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVL 140
            IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQIPLRH+L
Sbjct: 82  HIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHIL 141

Query: 141 LTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL 200
           + YD+M L NGVLRLQPK GH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFL
Sbjct: 142 MIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFL 201

Query: 201 LQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 250
           LQKFS +ERKQ+D  LEQGVE V+TL   GFS  ++RFNL QKYK+HKV
Sbjct: 202 LQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 250

[Close]

BLAST of Csa3G257600 vs. TAIR10
Match: AT5G19830.1 (AT5G19830.1 Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 244.2 bits (622), Expect = 8.5e-65
Identity = 115/197 (58.38%), Postives = 145/197 (73.60%), Query Frame = 1


Query: 52  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL 111
           + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + ++P++L
Sbjct: 16  HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75

Query: 112 AKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVM 171
           AKPQTYMN  GES GPLAA+Y++PL  VL+ +D+M LP GVLRLQ K GHG HNG+KSVM
Sbjct: 76  AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135

Query: 172 GHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGF 231
            H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +    F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195

Query: 232 SQRVNRFNLSQKYKYHK 249
            +    FN+ QKYK+ K
Sbjct: 196 GESWRLFNVEQKYKHLK 212

[Close]

BLAST of Csa3G257600 vs. TAIR10
Match: AT1G18440.1 (AT1G18440.1 Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 234.6 bits (597), Expect = 6.8e-62
Identity = 119/236 (50.42%), Postives = 159/236 (67.37%), Query Frame = 1


Query: 4   AASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGLGNP 63
           ++S QS+S  SNS S+       +P      ++ +S P S    L     PWLIVGLGNP
Sbjct: 56  SSSSQSLSFSSNSFSS-------QPESELLQALPSSKPKSPPLQL-----PWLIVGLGNP 115

Query: 64  GNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGE 123
           G KY GTRHNVGFEM+D++A A+GI MNT+  KAL G G IG +PI+LAKPQT+MN  GE
Sbjct: 116 GKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGE 175

Query: 124 SVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRL 183
           SVG + + Y+IPL+ VL+ YD+++LP G LRL PK GHG HNG++S++  L G R+FPRL
Sbjct: 176 SVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRL 235

Query: 184 CIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
            IGIG PPG MD   F+L++F+  E++++D   + G+EA+R L L GF++     N
Sbjct: 236 RIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVN 279

[Close]

BLAST of Csa3G257600 vs. NCBI nr
Match: gi|449455782|ref|XP_004145630.1| (PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucumis sativus])

HSP 1 Score: 503.4 bits (1295), Expect = 2.2e-139
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1


Query: 1   MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGL 60
           MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGL
Sbjct: 1   MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGL 60

Query: 61  GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 120
           GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF
Sbjct: 61  GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 120

Query: 121 CGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREF 180
           CGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREF
Sbjct: 121 CGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREF 180

Query: 181 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL 240
           PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL
Sbjct: 181 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL 240

Query: 241 SQKYKYHKV 250
           SQKYKYHKV
Sbjct: 241 SQKYKYHKV 249

[Close]

BLAST of Csa3G257600 vs. NCBI nr
Match: gi|659123230|ref|XP_008461557.1| (PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucumis melo])

HSP 1 Score: 483.8 bits (1244), Expect = 1.8e-133
Identity = 239/250 (95.60%), Postives = 246/250 (98.40%), Query Frame = 1


Query: 1   MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDS-NGLKVEYTPWLIVG 60
           ML+AASFQSVSLFSNSS+AH+H PSTKPLVSTRLSVRAS PDSD+ NG+KVEYTPWLIVG
Sbjct: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLAAHYQIPLRH+LLTYDEM+LPNGVLRLQPK GHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240

Query: 241 LSQKYKYHKV 250
           LSQKYKYHKV
Sbjct: 241 LSQKYKYHKV 250

[Close]

BLAST of Csa3G257600 vs. NCBI nr
Match: gi|1009128818|ref|XP_015881440.1| (PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 394.8 bits (1013), Expect = 1.1e-106
Identity = 197/250 (78.80%), Postives = 212/250 (84.80%), Query Frame = 1


Query: 1   MLFAASFQSVSLFSNSSSAHFHF-PSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVG 60
           M +A SF   S+F        HF    K  +ST   + AS PD + NG+K EYTPWLIVG
Sbjct: 1   MWYAVSFSHSSIFYPRRPWSVHFLQKQKQSISTSCRISASLPDHN-NGVKAEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSI+Q+QGI+MNTIQSKALIGIGSI EVPILL KPQ+YMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSISQSQGIVMNTIQSKALIGIGSIEEVPILLVKPQSYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRRE 180
           F GESVGPLAA+YQ+PLRH+LL YDEM+LPNGVLRLQPK GHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FSGESVGPLAAYYQVPLRHILLIYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKFS+VER QIDAALEQGVEAVRTL LNGFS  V RFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSTVERHQIDAALEQGVEAVRTLVLNGFSNSVTRFN 240

Query: 241 LSQKYKYHKV 250
           L QKYKYHKV
Sbjct: 241 LGQKYKYHKV 249

[Close]

BLAST of Csa3G257600 vs. NCBI nr
Match: gi|590652761|ref|XP_007033235.1| (Peptidyl-tRNA hydrolase family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 390.2 bits (1001), Expect = 2.7e-105
Identity = 186/219 (84.93%), Postives = 203/219 (92.69%), Query Frame = 1


Query: 31  STRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILM 90
           STRL VRAS PD++ +G KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID I+Q +GI +
Sbjct: 27  STRLCVRASLPDNN-DGFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDQISQVEGIAL 86

Query: 91  NTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPN 150
           NTIQSKALIG+G+IGEVPILLAKPQ YMNFCGESVGPLAA+YQ+PLRH+LL YDEM+LPN
Sbjct: 87  NTIQSKALIGLGAIGEVPILLAKPQAYMNFCGESVGPLAAYYQVPLRHILLIYDEMSLPN 146

Query: 151 GVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERK 210
           GVLRLQPK GHGHHNGVKSVMGHLDG REFPRLCIGIGNPPG+MDMKA+LLQKFSSVER 
Sbjct: 147 GVLRLQPKGGHGHHNGVKSVMGHLDGCREFPRLCIGIGNPPGSMDMKAYLLQKFSSVERN 206

Query: 211 QIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 250
           QIDAALEQGVEAVRT+ LNGFS ++ RFNL QKYKYHKV
Sbjct: 207 QIDAALEQGVEAVRTIVLNGFSHKITRFNLGQKYKYHKV 244

[Close]

BLAST of Csa3G257600 vs. NCBI nr
Match: gi|590652768|ref|XP_007033237.1| (Peptidyl-tRNA hydrolase family protein isoform 3, partial [Theobroma cacao])

HSP 1 Score: 390.2 bits (1001), Expect = 2.7e-105
Identity = 186/219 (84.93%), Postives = 203/219 (92.69%), Query Frame = 1


Query: 31  STRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILM 90
           STRL VRAS PD++ +G KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID I+Q +GI +
Sbjct: 5   STRLCVRASLPDNN-DGFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDQISQVEGIAL 64

Query: 91  NTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPN 150
           NTIQSKALIG+G+IGEVPILLAKPQ YMNFCGESVGPLAA+YQ+PLRH+LL YDEM+LPN
Sbjct: 65  NTIQSKALIGLGAIGEVPILLAKPQAYMNFCGESVGPLAAYYQVPLRHILLIYDEMSLPN 124

Query: 151 GVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERK 210
           GVLRLQPK GHGHHNGVKSVMGHLDG REFPRLCIGIGNPPG+MDMKA+LLQKFSSVER 
Sbjct: 125 GVLRLQPKGGHGHHNGVKSVMGHLDGCREFPRLCIGIGNPPGSMDMKAYLLQKFSSVERN 184

Query: 211 QIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 250
           QIDAALEQGVEAVRT+ LNGFS ++ RFNL QKYKYHKV
Sbjct: 185 QIDAALEQGVEAVRTIVLNGFSHKITRFNLGQKYKYHKV 222

The following BLAST results are available for this feature:

BLAST of Csa3G257600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CRS2B_ARATH	5.2e-96	73.48	Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Ara...	[more]
CRS2A_ARATH	1.6e-89	70.74	Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Ara...	[more]
CRS2_MAIZE	4.4e-87	64.45	Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea m...	[more]
CRS2_ORYSJ	1.8e-85	67.70	Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza...	[more]
PTHM_ARATH	1.5e-63	58.38	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2...	[more]

BLAST of Csa3G257600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCC6_CUCSA	1.5e-139	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G257600 PE=3 SV=1	[more]
A0A061EHT4_THECC	1.9e-105	84.93	Peptidyl-tRNA hydrolase family protein isoform 3 (Fragment) OS=Theobroma cacao G...	[more]
A0A061EH51_THECC	1.9e-105	84.93	Peptidyl-tRNA hydrolase family protein isoform 1 OS=Theobroma cacao GN=TCM_01942...	[more]
B9H311_POPTR	5.5e-105	77.91	Peptidyl-tRNA hydrolase family protein OS=Populus trichocarpa GN=POPTR_0004s0973...	[more]
A0A068U3A3_COFCA	4.4e-102	82.35	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040260001 PE=3 SV=1	[more]

BLAST of Csa3G257600 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16140.1	2.9e-97	73.48	Peptidyl-tRNA hydrolase family protein	[more]
AT5G38290.2	9.1e-91	70.74	Peptidyl-tRNA hydrolase family protein	[more]
AT5G19830.1	8.5e-65	58.38	Peptidyl-tRNA hydrolase family protein	[more]
AT1G18440.1	6.8e-62	50.42	Peptidyl-tRNA hydrolase family protein	[more]

BLAST of Csa3G257600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455782\|ref\|XP_004145630.1\|	2.2e-139	100.00	PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropla...	[more]
gi\|659123230\|ref\|XP_008461557.1\|	1.8e-133	95.60	PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropla...	[more]
gi\|1009128818\|ref\|XP_015881440.1\|	1.1e-106	78.80	PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropla...	[more]
gi\|590652761\|ref\|XP_007033235.1\|	2.7e-105	84.93	Peptidyl-tRNA hydrolase family protein isoform 1 [Theobroma cacao]	[more]
gi\|590652768\|ref\|XP_007033237.1\|	2.7e-105	84.93	Peptidyl-tRNA hydrolase family protein isoform 3, partial [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001328	Pept_tRNA_hydro
IPR018171	Pept_tRNA_hydro_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0004045	aminoacyl-tRNA hydrolase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004045	aminoacyl-tRNA hydrolase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU095125	cucumber EST collection version 3.0	transcribed_cluster
CU128420	cucumber EST collection version 3.0	transcribed_cluster
CU156780	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G257600.1	Csa3G257600.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU156780	CU156780	transcribed_cluster
CU128420	CU128420	transcribed_cluster
CU095125	CU095125	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001328	Peptidyl-tRNA hydrolase	GENE3D	G3DSA:3.40.50.1470		coord: 48..239 score: 7.2
IPR001328	Peptidyl-tRNA hydrolase	HAMAP	MF_00083	Pept_tRNA_hydro_bact	coord: 54..232 score: 29
IPR001328	Peptidyl-tRNA hydrolase	PANTHER	PTHR17224	PEPTIDYL-TRNA HYDROLASE	coord: 13..249 score: 1.6E
IPR001328	Peptidyl-tRNA hydrolase	PFAM	PF01195	Pept_tRNA_hydro	coord: 56..236 score: 2.2
IPR001328	Peptidyl-tRNA hydrolase	TIGRFAMs	TIGR00447	TIGR00447	coord: 56..239 score: 2.1
IPR001328	Peptidyl-tRNA hydrolase	unknown	SSF53178	Peptidyl-tRNA hydrolase-like	coord: 53..239 score: 8.11
IPR018171	Peptidyl-tRNA hydrolase, conserved site	PROSITE	PS01195	PEPT_TRNA_HYDROL_1	coord: 67..80 scor
IPR018171	Peptidyl-tRNA hydrolase, conserved site	PROSITE	PS01196	PEPT_TRNA_HYDROL_2	coord: 160..170 scor
None	No IPR available	PANTHER	PTHR17224:SF3	CHLOROPLASTIC GROUP IIB INTRON SPLICING FACILITATOR CRS2-A, CHLOROPLASTIC-RELATED	coord: 13..249 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G257600	Cla007137	Watermelon (97103) v1	cuwmB236
Csa3G257600	MELO3C023748	Melon (DHL92) v3.5.1	cumeB161
Csa3G257600	ClCG05G012320	Watermelon (Charleston Gray)	cuwcgB225
Csa3G257600	Lsi05G004130	Bottle gourd (USVL1VR-Ls)	culsiB212
Csa3G257600	MELO3C023748.2	Melon (DHL92) v3.6.1	cumedB228
Csa3G257600	Cla97C05G094130	Watermelon (97103) v2	cuwmbB207
Csa3G257600	Bhi01G001428	Wax gourd	cuwgoB271
Csa3G257600	CSPI03G20250	Wild cucumber (PI 183967)	cpicuB120
Csa3G257600	Cucsa.031770	Cucumber (Gy14) v1	cgycuB003
Csa3G257600	CsGy3G020030	Cucumber (Gy14) v2	cgybcuB109

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G257600	Silver-seed gourd	carcuB0513
Csa3G257600	Watermelon (97103) v2	cuwmbB218
Csa3G257600	Cucurbita maxima (Rimu)	cmacuB242
Csa3G257600	Cucurbita moschata (Rifu)	cmocuB229
Csa3G257600	Watermelon (Charleston Gray)	cuwcgB233
Csa3G257600	Watermelon (97103) v1	cuwmB247
Csa3G257600	Cucurbita pepo (Zucchini)	cpecuB600