Carg07497 (gene) Silver-seed gourd

Overview
NameCarg07497
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPeptidyl-tRNA hydrolase family protein
LocationCucurbita_argyrosperma_scaffold_019 : 1133610 .. 1137324 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCCATTCAGAAACGCCCTCCTTCCCGAATGCTTCCCAGCTGAATTTCCAGAATAGCCTCCGGAACAATACGATAGGGTGTCTTCTTCTTCTACGCCATTAACAGCGTCCACAGCTGCTTCTGTTCACCCAAATCAACTCCTCTTTCAACCAAATCATCCAATTTACGCGCAGGTTCAGTTTTTTATCTTCTTCGATTTCCTAAAATTTGCTTCGCTTCGCCCGGAGAAATTCAATGAAATAACACGATTCTGTATGGGTTTTCTCAATTTTGTTTTAGGTTTCAATGTTATATGCAGCATCGGTCCCAAGTGTTTGCTTATTTTCCAATTCGAGCATTGCCCATTTCCCTTCTAGATTCCCAAAGCGTCTGGTTCCGACGAGGCTTTCTGTACGAGCTTCATTGCCAGATAATGATAATGGCGTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGGAATAAGTACCATGGGACTCGGCACAATGTAATCAAACGTTCTTTAAGTCGATTGTACTGAACTTTTAGAGTGATTTTGGAATGGAATTTGATAGTATACCTCCCAATTAAGCATATTTTTCTAGCACTTTTGGTAGGAAGCCTTACTAGAGTGTTCTTCAAATTTTTCGAAATAAATTTTGTTATGTAGTATTGGCTAGTAGTAGTTTTGTCATTCTAAAAAGTCTTACCAAACTCTCACTCTTAATGTGCAATGGCACTTAGTGACTCTTGGGGTTGTCCTGCTTAGGTTGGTTTCGAAATGATCGATAGCATTGCTCAGGCGCAAGGCATTTTGATGAACACAATACAATCCAAAGCCTTGATTGGAATAGGTTGGCCTTTGTTCCTCCCTTTTTGTTATTGAATTGGATTTCCATATACTGGTAGATTTGAAGTTCGTTGAGTTTTCTTGAATGATCAGTACAGGTTCAATTGGAGATGTACCAATTCTGTTGGCAAAGCCTCAGACTTACATGAATTTCTGTGGAGAATCGGTTTGTCTACTCGTTTCTTTATTTTTCTTTTGTTCAATACACATGCCATACAGGATAGAGTAGACTGTTGGTTTGTTTCTTTCCCTAGTTTAAGGATGAAAACTTAGTTTGAAGCGAAGGATATGATGTTCATTGAGGTTCTTGCATGATCCTAAATCCCTATGGATATTTCTTCGGTTTTCCTTTGAAAAAACGACACAGTATCTATGCTGCAGTTAGAGAGAAACACAAAGTTAACCGACTGTAGGTTTTCATAATGAAGATTTTGTGAGATCCCACGTTGGTTGGAGAAGGGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCACATTAAAACCTTGAGGGGAAACCCTTGAAGAGAAAGTCCAACGAGGACAATATCTGCTAGTGTTGGGCTTGGGCCGTTACAAACGGTATCAAAGCCAGATCCTAGGCAGTGTGCTAGCGAGGACGCTGAGTCTCCAATGGGGTAGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCCTTGGAAGGATGTGGAAATCTTTCCCTAATAGACGCGTTTTAAAACTTTGAGGGGAAGTCCTTGAAGGGAAAGCTAAAAGAGGACAATAACGGCTAGCGGTGGACTGAGCCGTTGCAGATGTGCTGGAGATACTAAGATTTTTCATTTTTCTAATTACCCGTTGATTGCCCTAGAGATGCGTATTTGCCGTCAGAGGATGCTATAATATTGTAGAATTAGAAACCATCCTGTTCACTGGCTAACTCTATCTTTTAGTCATGAGTGTCCTATGAACCCTGCATATCGATGATCCCTTCTTACGTTTCCAATTGTTAATTTGTCAATTATATATCTTCTATGAATCCTTCATTCATTAGTTGAATCATTTTTTTCATAATATTGAGACAGTTATCTCTTCACCTCACTTTCTGTTTAAATTTGTATAGGTTGGACCTCTTGCTGTACATTATCAAATACCTTTACGTCACATCTTGTTGGTATAAGTTGCAATATCTCTTTGCAATCCTCATTTGTTAGCTTACAAAATGATTAGATTGTAATGGAAGTATCTGTATACACTTACCATTGTAGGTTTATGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTCCAGCCAAAGGGAGGCCACGGCCATCATAATGGGTATATCGATGAAATATTAGTTTAGATTTCACCTTGTTCTTTCTTTTTTTCTTTCTAGTTTTAATTCATACTTGCTTTCAATTTTTCTAATCTTGACATGGTTTGGTTATGTTTTTTAGAGTGCTTTATGACTGAAAAGACTCCCTATTAAAAATCATCATGTTTGGAAAACATAAAATTAAAAGTATGTTTGGAAAAAGAGAAAGGAGTATTTAAAGTGCTTCATAAGTGAAGACTATCATGCGTTGGCCCAGTGGTAGAGCCATGAGAATAGTAAAGAAATTAGAGGGAATATGTGAGATCCCACATCGGTTGGAAAGAAGAACGAAGCATTCTTTATAAGAGTGTGGAAACCTCCCTCTAGTAGACTCCCCTCAAGGGAAAGCTCAAAGAGGACAATATCTGCTAACGGTGGGCTTAGGCCATTACCAATGGTATTAGAGATAGACACCGGGTGATGTGCCAGCAAGGAGACTGAGCTCCAGGGGGTGGGGGTACATAAGGCGGTGTGCCAGCAAGGACGCTAGGCCTTGAAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAACATTCTTTATAAGGTGTGGAAACCTCTCCCTAGCAGACGTGTTATAAAAACCATGAGGAGAAGCCCGAAAGGGAAAGTCCAAAGAAGACAATATCTACCAGCGGTGGGCTTGGGCTGTTACACAATGAGTTCAATCCGTGATGGCCACCTTAACCTAGGATCAAACACCGCATGTTTCTCATCCAATACCTCACTTCTTCCCATTGAATACTTGATGCTCGTGTTTCATATTGGTAATTTCTAGTTAGGAGGATGACACATGCATTTTTTTTTCTCGTCATTTAACTTGATAGGCTTTCATTATTGTTGAGAAATTTATGGCAGCATGTGCATAAAAAGCTGTTATTGATTTCTCTAGTTACACAGGGTGAAGAGTGTAATGGGACATCTGGATGGCCGACGTGAGTTTCCTCGGTTATGCATCGGTACGTATTTTTGTTAACATTAATTCGAAGGTTCGTTTAGTTTCTACTTCAGGAAGTGTAAAAAACTACATTACTCATGTTTTTATCTAGGAATTGGGAACCCACCTGGGACTATGGACATCAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGGTGAGTAGTCGCCTTCGTAACTCGGATAGTACTTTTTCCCCTTTTTCGAATTCGGTTTCCATATCATCATATTTAAAATAAACGAATCGGACTACCAAACAGATCGATGCAGCACTAGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAAAGGATTCAGCAAAGGAGTCGACAGATTCAACTTGACCCAGAAATACAAGTATCACAAGGTTTGATCCTATGGGAAAATAAAATTGTTCGAGTTTTGATCATATGTAATAAGCCAATAGAATGATTGACTGTTCATCAATGTACACGAGAAAATCAGAAATGAAATAGACAAAATGAAGGTCGGGGGTATTGATGATCTT

mRNA sequence

TACCCATTCAGAAACGCCCTCCTTCCCGAATGCTTCCCAGCTGAATTTCCAGAATAGCCTCCGGAACAATACGATAGGGTGTCTTCTTCTTCTACGCCATTAACAGCGTCCACAGCTGCTTCTGTTCACCCAAATCAACTCCTCTTTCAACCAAATCATCCAATTTACGCGCAGGTTTCAATGTTATATGCAGCATCGGTCCCAAGTGTTTGCTTATTTTCCAATTCGAGCATTGCCCATTTCCCTTCTAGATTCCCAAAGCGTCTGGTTCCGACGAGGCTTTCTGTACGAGCTTCATTGCCAGATAATGATAATGGCGTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGGAATAAGTACCATGGGACTCGGCACAATGTTGGTTTCGAAATGATCGATAGCATTGCTCAGGCGCAAGGCATTTTGATGAACACAATACAATCCAAAGCCTTGATTGGAATAGGTTCAATTGGAGATGTACCAATTCTGTTGGCAAAGCCTCAGACTTACATGAATTTCTGTGGAGAATCGGTTGGACCTCTTGCTGTACATTATCAAATACCTTTACGTCACATCTTGTTGGTTTATGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTCCAGCCAAAGGGAGGCCACGGCCATCATAATGGGGTGAAGAGTGTAATGGGACATCTGGATGGCCGACGTGAGTTTCCTCGGTTATGCATCGGAATTGGGAACCCACCTGGGACTATGGACATCAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGATCGATGCAGCACTAGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAAAGGATTCAGCAAAGGAGTCGACAGATTCAACTTGACCCAGAAATACAAGTATCACAAGGTTTGATCCTATGGGAAAATAAAATTGTTCGAGTTTTGATCATATGTAATAAGCCAATAGAATGATTGACTGTTCATCAATGTACACGAGAAAATCAGAAATGAAATAGACAAAATGAAGGTCGGGGGTATTGATGATCTT

Coding sequence (CDS)

ATGTTATATGCAGCATCGGTCCCAAGTGTTTGCTTATTTTCCAATTCGAGCATTGCCCATTTCCCTTCTAGATTCCCAAAGCGTCTGGTTCCGACGAGGCTTTCTGTACGAGCTTCATTGCCAGATAATGATAATGGCGTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGGAATAAGTACCATGGGACTCGGCACAATGTTGGTTTCGAAATGATCGATAGCATTGCTCAGGCGCAAGGCATTTTGATGAACACAATACAATCCAAAGCCTTGATTGGAATAGGTTCAATTGGAGATGTACCAATTCTGTTGGCAAAGCCTCAGACTTACATGAATTTCTGTGGAGAATCGGTTGGACCTCTTGCTGTACATTATCAAATACCTTTACGTCACATCTTGTTGGTTTATGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTCCAGCCAAAGGGAGGCCACGGCCATCATAATGGGGTGAAGAGTGTAATGGGACATCTGGATGGCCGACGTGAGTTTCCTCGGTTATGCATCGGAATTGGGAACCCACCTGGGACTATGGACATCAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGATCGATGCAGCACTAGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAAAGGATTCAGCAAAGGAGTCGACAGATTCAACTTGACCCAGAAATACAAGTATCACAAGGTTTGA

Protein sequence

MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
Homology
[Close]
BLAST of Carg07497 vs. NCBI nr
Match: XP_022948563.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 507.3 bits (1305), Expect = 3.0e-140
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0 

Query: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60
           MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG
Sbjct: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGIGSIG+VPILLAKPQTYMNFC
Sbjct: 61  NPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180

Query: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
           RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240

Query: 241 QKYKYHKV 249
           QKYKYHKV
Sbjct: 241 QKYKYHKV 248

[Close]
BLAST of Carg07497 vs. NCBI nr
Match: XP_023523313.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 507.3 bits (1305), Expect = 3.0e-140
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0 

Query: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60
           MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG
Sbjct: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIG+VPILLAKPQTYMNFC
Sbjct: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180

Query: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
           RLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240

Query: 241 QKYKYHKV 249
           QKYKYHKV
Sbjct: 241 QKYKYHKV 248

[Close]
BLAST of Carg07497 vs. NCBI nr
Match: XP_022998092.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 501.9 bits (1291), Expect = 1.2e-138
Identity = 244/248 (98.39%), Postives = 246/248 (99.19%), Query Frame = 0 

Query: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60
           MLYAASVPSVCLFSNSS AHFPSRFPKRLVPTRLSVRASL DNDNGVKVEYTPWLIVGLG
Sbjct: 1   MLYAASVPSVCLFSNSSSAHFPSRFPKRLVPTRLSVRASLQDNDNGVKVEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIG+VPILLAKPQTYMNFC
Sbjct: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180

Query: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
           RLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT
Sbjct: 181 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240

Query: 241 QKYKYHKV 249
           QKYKYHKV
Sbjct: 241 QKYKYHKV 248

[Close]
BLAST of Carg07497 vs. NCBI nr
Match: XP_022148094.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Momordica charantia])

HSP 1 Score: 466.1 bits (1198), Expect = 7.6e-128
Identity = 229/248 (92.34%), Postives = 234/248 (94.35%), Query Frame = 0 

Query: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60
           MLYA SV SVCL SNSS AHF  R  KRLVPTRLSVRASL DNDNGVKVEYTPWLIVGLG
Sbjct: 1   MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGIGSIG+VPILLAKPQTYMNFC
Sbjct: 61  NPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFC 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
           GESVGPLA HYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP
Sbjct: 121 GESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180

Query: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
           RLCIGIGNPPGTMD+KAFLLQKF SVERKQIDAALEQGVEAVRTLAL GFS+ V+RFNLT
Sbjct: 181 RLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLT 240

Query: 241 QKYKYHKV 249
           QKYKY+KV
Sbjct: 241 QKYKYNKV 248

[Close]
BLAST of Carg07497 vs. NCBI nr
Match: XP_008461557.1 (PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucumis melo])

HSP 1 Score: 457.2 bits (1175), Expect = 3.5e-125
Identity = 227/250 (90.80%), Postives = 234/250 (93.60%), Query Frame = 0 

Query: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLP--DNDNGVKVEYTPWLIVG 60
           MLYAAS  SV LFSNSS AH+ S   K LV TRLSVRASLP  DN+NGVKVEYTPWLIVG
Sbjct: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIG+VPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFN 240
           FPRLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAALEQGVEAVRTLAL GFS+ V+RFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240

Query: 241 LTQKYKYHKV 249
           L+QKYKYHKV
Sbjct: 241 LSQKYKYHKV 250

[Close]
BLAST of Carg07497 vs. TAIR10
Match: AT5G16140.1 (Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 354.8 bits (909), Expect = 4.4e-98
Identity = 169/239 (70.71%), Postives = 196/239 (82.01%), Query Frame = 0 

Query: 10  VCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGT 69
           +C     S+ HF ++ P           ++    D+  KVEYTPWLIVGLGNPGNKYHGT
Sbjct: 2   LCPTYTPSVYHFQTQKPVFRKQRFRVCSSTSGGEDDRFKVEYTPWLIVGLGNPGNKYHGT 61

Query: 70  RHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFCGESVGPLAV 129
           RHNVGFEMID +A+ +G+LMNTIQSKALIGIG+I DVPILLAKPQTYMNF GESVG LA 
Sbjct: 62  RHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLAS 121

Query: 130 HYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNP 189
           HY++PLRHIL++YDEM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG P
Sbjct: 122 HYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKP 181

Query: 190 PGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV 249
           PG MD+KAFLLQKFS +E+KQI+ ALEQG EAV+TL L GF++G+ RFNL QKYK+HKV
Sbjct: 182 PGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]
BLAST of Carg07497 vs. TAIR10
Match: AT5G38290.2 (Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 331.6 bits (849), Expect = 4.0e-91
Identity = 158/215 (73.49%), Postives = 182/215 (84.65%), Query Frame = 0 

Query: 35  SVRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQ 94
           S+RASLP +DN  +K EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A  I MNTIQ
Sbjct: 36  SLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQ 95

Query: 95  SKALIGIGSIGDVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLR 154
           SKAL+GIGS+G+VPILL KPQ YMNF GESVGPLA +YQIPLRHIL++YD+M L NGVLR
Sbjct: 96  SKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLR 155

Query: 155 LQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDA 214
           LQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MD+KAFLLQKFS +ERKQ+D 
Sbjct: 156 LQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDE 215

Query: 215 ALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV 249
            LEQGVE V+TL  +GFS  + RFNL QKYK+HKV
Sbjct: 216 GLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 250

[Close]
BLAST of Carg07497 vs. TAIR10
Match: AT5G19830.1 (Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 252.7 bits (644), Expect = 2.4e-67
Identity = 117/197 (59.39%), Postives = 149/197 (75.63%), Query Frame = 0 

Query: 51  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILL 110
           + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + D+P++L
Sbjct: 16  HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75

Query: 111 AKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVM 170
           AKPQTYMN  GES GPLA +Y++PL  +L+V+D+M LP GVLRLQ KGGHG HNG+KSVM
Sbjct: 76  AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135

Query: 171 GHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGF 230
            H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +  K F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195

Query: 231 SKGVDRFNLTQKYKYHK 248
            +    FN+ QKYK+ K
Sbjct: 196 GESWRLFNVEQKYKHLK 212

[Close]
BLAST of Carg07497 vs. TAIR10
Match: AT1G18440.1 (Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 240.4 bits (612), Expect = 1.2e-63
Identity = 108/186 (58.06%), Postives = 142/186 (76.34%), Query Frame = 0 

Query: 53  PWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAK 112
           PWLIVGLGNPG KY GTRHNVGFEM+D++A A+GI MNT+  KAL G G IG++PI+LAK
Sbjct: 94  PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAK 153

Query: 113 PQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGH 172
           PQT+MN  GESVG +   Y+IPL+ +L+VYD++ LP G LRL PKGGHG HNG++S++  
Sbjct: 154 PQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 213

Query: 173 LDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSK 232
           L G R+FPRL IGIG PPG MD   F+L++F+  E++++D   + G+EA+R L L+GF+K
Sbjct: 214 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNK 273

Query: 233 GVDRFN 239
                N
Sbjct: 274 SATFVN 279

[Close]
BLAST of Carg07497 vs. Swiss-Prot
Match: sp|Q9LF14|CRS2B_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2B PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 8.0e-97
Identity = 169/239 (70.71%), Postives = 196/239 (82.01%), Query Frame = 0 

Query: 10  VCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGT 69
           +C     S+ HF ++ P           ++    D+  KVEYTPWLIVGLGNPGNKYHGT
Sbjct: 2   LCPTYTPSVYHFQTQKPVFRKQRFRVCSSTSGGEDDRFKVEYTPWLIVGLGNPGNKYHGT 61

Query: 70  RHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFCGESVGPLAV 129
           RHNVGFEMID +A+ +G+LMNTIQSKALIGIG+I DVPILLAKPQTYMNF GESVG LA 
Sbjct: 62  RHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLAS 121

Query: 130 HYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNP 189
           HY++PLRHIL++YDEM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG P
Sbjct: 122 HYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKP 181

Query: 190 PGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV 249
           PG MD+KAFLLQKFS +E+KQI+ ALEQG EAV+TL L GF++G+ RFNL QKYK+HKV
Sbjct: 182 PGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]
BLAST of Carg07497 vs. Swiss-Prot
Match: sp|Q9M5P4|CRS2_MAIZE (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays OX=4577 GN=CRS2 PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.7e-92
Identity = 168/257 (65.37%), Postives = 203/257 (78.99%), Query Frame = 0 

Query: 2   LYAASVPSVCLFSNSSIAHFPS-RFPKRLV---------PTRLSVRASLPDNDNGVKVEY 61
           L AA++PS    S+ S    PS R P++ +         P   +V +S+PD   G  VEY
Sbjct: 3   LLAAAIPSTS--SHFSAPFLPSFRMPRKSLTAPLHRIRRPRPFTVVSSVPDPAAG-PVEY 62

Query: 62  TPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLA 121
           TPWLI GLGNPGNKY+GTRHNVGFEM+D IA  +GI MNTIQSK+L+GIGSIG+VP+L+ 
Sbjct: 63  TPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVV 122

Query: 122 KPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMG 181
           KPQ+YMN+ GE++GPLA +YQ+PLRHILL+YD+ SLPNGVLRLQ KGGHG HNG+++V+ 
Sbjct: 123 KPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIE 182

Query: 182 HLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFS 241
           HLDGRREFPRL IGIG+PPG MD +AFLLQKFSS ER QID ALEQGV+AVRTL LKGFS
Sbjct: 183 HLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFS 242

Query: 242 KGVDRFNLTQKYKYHKV 249
              +RFNL QKYK+H+V
Sbjct: 243 GSTERFNLVQKYKFHRV 256

[Close]
BLAST of Carg07497 vs. Swiss-Prot
Match: sp|Q9FKN4|CRS2A_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2A PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 7.3e-90
Identity = 158/215 (73.49%), Postives = 182/215 (84.65%), Query Frame = 0 

Query: 35  SVRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQ 94
           S+RASLP +DN  +K EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A  I MNTIQ
Sbjct: 32  SLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQ 91

Query: 95  SKALIGIGSIGDVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLR 154
           SKAL+GIGS+G+VPILL KPQ YMNF GESVGPLA +YQIPLRHIL++YD+M L NGVLR
Sbjct: 92  SKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLR 151

Query: 155 LQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDA 214
           LQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MD+KAFLLQKFS +ERKQ+D 
Sbjct: 152 LQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDE 211

Query: 215 ALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV 249
            LEQGVE V+TL  +GFS  + RFNL QKYK+HKV
Sbjct: 212 GLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

[Close]
BLAST of Carg07497 vs. Swiss-Prot
Match: sp|Q5ZCL8|CRS2_ORYSJ (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0132800 PE=2 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.1e-88
Identity = 154/216 (71.30%), Postives = 183/216 (84.72%), Query Frame = 0 

Query: 33  RLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTI 92
           R++V AS+PD       EYTPWLI GLGNPG+KYHGTRHNVGFEM+D IA+ +GI MNTI
Sbjct: 45  RIAVVASVPD-PAARPAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTI 104

Query: 93  QSKALIGIGSIGDVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVL 152
           QSK+L+GIGSIG+VP+LL KPQ+Y+N+ GE++GPLA +YQ+PLRHIL++YDEMSLPNGVL
Sbjct: 105 QSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVL 164

Query: 153 RLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQID 212
           RLQ KGGHG HNG+++VM  LD  RE PRL IGIG+PPG MD +AFLLQKFSS ER QID
Sbjct: 165 RLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQID 224

Query: 213 AALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV 249
            ALEQGV+AVRTL LKGFS  ++RFNL QKYK+H V
Sbjct: 225 TALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259

[Close]
BLAST of Carg07497 vs. Swiss-Prot
Match: sp|Q6NLS8|PTHM_ARATH (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19830 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.3e-66
Identity = 117/197 (59.39%), Postives = 149/197 (75.63%), Query Frame = 0 

Query: 51  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILL 110
           + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + D+P++L
Sbjct: 16  HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75

Query: 111 AKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVM 170
           AKPQTYMN  GES GPLA +Y++PL  +L+V+D+M LP GVLRLQ KGGHG HNG+KSVM
Sbjct: 76  AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135

Query: 171 GHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGF 230
            H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +  K F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195

Query: 231 SKGVDRFNLTQKYKYHK 248
            +    FN+ QKYK+ K
Sbjct: 196 GESWRLFNVEQKYKHLK 212

[Close]
BLAST of Carg07497 vs. TrEMBL
Match: tr|A0A1S3CFG5|A0A1S3CFG5_CUCME (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500129 PE=3 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.3e-125
Identity = 227/250 (90.80%), Postives = 234/250 (93.60%), Query Frame = 0 

Query: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLP--DNDNGVKVEYTPWLIVG 60
           MLYAAS  SV LFSNSS AH+ S   K LV TRLSVRASLP  DN+NGVKVEYTPWLIVG
Sbjct: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIG+VPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFN 240
           FPRLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAALEQGVEAVRTLAL GFS+ V+RFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240

Query: 241 LTQKYKYHKV 249
           L+QKYKYHKV
Sbjct: 241 LSQKYKYHKV 250

[Close]
BLAST of Carg07497 vs. TrEMBL
Match: tr|A0A0A0LCC6|A0A0A0LCC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257600 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 2.4e-122
Identity = 221/249 (88.76%), Postives = 231/249 (92.77%), Query Frame = 0 

Query: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDND-NGVKVEYTPWLIVGL 60
           ML+AAS  SV LFSNSS AHF     K LV TRLSVRAS PD+D NG+KVEYTPWLIVGL
Sbjct: 1   MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGL 60

Query: 61  GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNF 120
           GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIG+VPILLAKPQTYMNF
Sbjct: 61  GNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNF 120

Query: 121 CGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREF 180
           CGESVGPLA HYQIPLRH+LL YDEM+LPNGVLRLQPK GHGHHNGVKSVMGHLDGRREF
Sbjct: 121 CGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREF 180

Query: 181 PRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNL 240
           PRLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAALEQGVEAVRTLAL GFS+ V+RFNL
Sbjct: 181 PRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL 240

Query: 241 TQKYKYHKV 249
           +QKYKYHKV
Sbjct: 241 SQKYKYHKV 249

[Close]
BLAST of Carg07497 vs. TrEMBL
Match: tr|A0A2P4HPJ6|A0A2P4HPJ6_QUESU (Chloroplastic group iib intron splicing facilitator crs2-b, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_40792 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 4.5e-113
Identity = 201/248 (81.05%), Postives = 219/248 (88.31%), Query Frame = 0 

Query: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60
           MLYA   P+ C+ S     + P    K  VP RL +RASLPDN+N  KVEYTPWLIVGLG
Sbjct: 43  MLYAVLAPNSCI-SYPRSPNCPHFHRKNSVPKRLCIRASLPDNNNAAKVEYTPWLIVGLG 102

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSI+QAQGILMNTIQSKALIGIGSIG+VPILLAKPQ+Y+N+ 
Sbjct: 103 NPGNKYHGTRHNVGFEMIDSISQAQGILMNTIQSKALIGIGSIGEVPILLAKPQSYINYS 162

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
           GE+VGPLA HYQ+PLRHILLVYDEMSLPNGV+RLQPKGGHGHHNGVKSVMGHLDG REFP
Sbjct: 163 GEAVGPLAAHYQVPLRHILLVYDEMSLPNGVIRLQPKGGHGHHNGVKSVMGHLDGCREFP 222

Query: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
           RLCIGIGNPPGTMD+KAFLLQKFSSVERKQID ALEQGVEAVRTL L+GF+  ++RFNL 
Sbjct: 223 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDEALEQGVEAVRTLVLQGFNHNIERFNLG 282

Query: 241 QKYKYHKV 249
           QKYKYHKV
Sbjct: 283 QKYKYHKV 289

[Close]
BLAST of Carg07497 vs. TrEMBL
Match: tr|A0A2P4HPK1|A0A2P4HPK1_QUESU (Chloroplastic group iib intron splicing facilitator crs2-b, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_40792 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 4.5e-113
Identity = 201/248 (81.05%), Postives = 219/248 (88.31%), Query Frame = 0 

Query: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60
           MLYA   P+ C+ S     + P    K  VP RL +RASLPDN+N  KVEYTPWLIVGLG
Sbjct: 33  MLYAVLAPNSCI-SYPRSPNCPHFHRKNSVPKRLCIRASLPDNNNAAKVEYTPWLIVGLG 92

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSI+QAQGILMNTIQSKALIGIGSIG+VPILLAKPQ+Y+N+ 
Sbjct: 93  NPGNKYHGTRHNVGFEMIDSISQAQGILMNTIQSKALIGIGSIGEVPILLAKPQSYINYS 152

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
           GE+VGPLA HYQ+PLRHILLVYDEMSLPNGV+RLQPKGGHGHHNGVKSVMGHLDG REFP
Sbjct: 153 GEAVGPLAAHYQVPLRHILLVYDEMSLPNGVIRLQPKGGHGHHNGVKSVMGHLDGCREFP 212

Query: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
           RLCIGIGNPPGTMD+KAFLLQKFSSVERKQID ALEQGVEAVRTL L+GF+  ++RFNL 
Sbjct: 213 RLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDEALEQGVEAVRTLVLQGFNHNIERFNLG 272

Query: 241 QKYKYHKV 249
           QKYKYHKV
Sbjct: 273 QKYKYHKV 279

[Close]
BLAST of Carg07497 vs. TrEMBL
Match: tr|A0A2I4DX87|A0A2I4DX87_9ROSI (chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic isoform X2 OS=Juglans regia OX=51240 GN=LOC108984294 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 5.6e-111
Identity = 196/248 (79.03%), Postives = 221/248 (89.11%), Query Frame = 0 

Query: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLG 60
           ML+A SVP+ C+ S    A  P    KR VP RLS+RASLPDN+NG K+EYTPWLIVGLG
Sbjct: 1   MLFAISVPNSCI-SYPRSASCPHFLRKRSVPARLSIRASLPDNNNGAKMEYTPWLIVGLG 60

Query: 61  NPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGDVPILLAKPQTYMNFC 120
           NPGNKYHGTRHNVGFEMIDSI++A+G+ MNTIQSK LIGIGSIG+VPILLAKPQ Y+N+ 
Sbjct: 61  NPGNKYHGTRHNVGFEMIDSISRAEGVSMNTIQSKTLIGIGSIGEVPILLAKPQAYVNYS 120

Query: 121 GESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFP 180
           GE+VGPLA +YQ+PLRHILLVYDEMSLP+GVLRLQPKGGHGHHNG++SVM HLDG R+FP
Sbjct: 121 GEAVGPLAAYYQVPLRHILLVYDEMSLPSGVLRLQPKGGHGHHNGMRSVMEHLDGCRQFP 180

Query: 181 RLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLT 240
           RLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAALEQGVEAVR+L L GFS+ ++RFNL 
Sbjct: 181 RLCIGIGNPPGTMDLKAFLLQKFSSVERKQIDAALEQGVEAVRSLVLHGFSENINRFNLG 240

Query: 241 QKYKYHKV 249
           QKYKYHKV
Sbjct: 241 QKYKYHKV 247

The following BLAST results are available for this feature:
BLAST of Carg07497 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948563.13.0e-14099.19chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... [more]
XP_023523313.13.0e-14099.19chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... [more]
XP_022998092.11.2e-13898.39chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... [more]
XP_022148094.17.6e-12892.34chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... [more]
XP_008461557.13.5e-12590.80PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropla... [more]
BLAST of Carg07497 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G16140.14.4e-9870.71Peptidyl-tRNA hydrolase family protein[more]
AT5G38290.24.0e-9173.49Peptidyl-tRNA hydrolase family protein[more]
AT5G19830.12.4e-6759.39Peptidyl-tRNA hydrolase family protein[more]
AT1G18440.11.2e-6358.06Peptidyl-tRNA hydrolase family protein[more]
BLAST of Carg07497 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LF14|CRS2B_ARATH8.0e-9770.71Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Ara... [more]
sp|Q9M5P4|CRS2_MAIZE2.7e-9265.37Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea m... [more]
sp|Q9FKN4|CRS2A_ARATH7.3e-9073.49Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Ara... [more]
sp|Q5ZCL8|CRS2_ORYSJ1.1e-8871.30Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza... [more]
sp|Q6NLS8|PTHM_ARATH4.3e-6659.39Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19... [more]
BLAST of Carg07497 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CFG5|A0A1S3CFG5_CUCME2.3e-12590.80chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Cuc... [more]
tr|A0A0A0LCC6|A0A0A0LCC6_CUCSA2.4e-12288.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257600 PE=3 SV=1[more]
tr|A0A2P4HPJ6|A0A2P4HPJ6_QUESU4.5e-11381.05Chloroplastic group iib intron splicing facilitator crs2-b, chloroplastic OS=Que... [more]
tr|A0A2P4HPK1|A0A2P4HPK1_QUESU4.5e-11381.05Chloroplastic group iib intron splicing facilitator crs2-b, chloroplastic OS=Que... [more]
tr|A0A2I4DX87|A0A2I4DX87_9ROSI5.6e-11179.03chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic isofor... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004045aminoacyl-tRNA hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR018171Pept_tRNA_hydro_CS
IPR036416Pept_tRNA_hydro_sf
IPR001328Pept_tRNA_hydro
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07497-RACarg07497-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001328Peptidyl-tRNA hydrolasePFAMPF01195Pept_tRNA_hydrocoord: 55..236
e-value: 1.3E-47
score: 161.8
IPR001328Peptidyl-tRNA hydrolaseTIGRFAMTIGR00447TIGR00447coord: 55..238
e-value: 2.7E-52
score: 175.2
IPR001328Peptidyl-tRNA hydrolasePANTHERPTHR17224PEPTIDYL-TRNA HYDROLASEcoord: 1..248
IPR001328Peptidyl-tRNA hydrolaseHAMAPMF_00083Pept_tRNA_hydro_bactcoord: 53..231
score: 30.302
IPR036416Peptidyl-tRNA hydrolase superfamilyGENE3DG3DSA:3.40.50.1470coord: 39..241
e-value: 2.0E-71
score: 241.5
IPR036416Peptidyl-tRNA hydrolase superfamilySUPERFAMILYSSF53178Peptidyl-tRNA hydrolase-likecoord: 52..238
NoneNo IPR availablePANTHERPTHR17224:SF3CHLOROPLASTIC GROUP IIB INTRON SPLICING FACILITATOR CRS2-A, CHLOROPLASTIC-RELATEDcoord: 1..248
NoneNo IPR availableCDDcd02406CRS2coord: 52..242
e-value: 1.91501E-130
score: 368.73
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01195PEPT_TRNA_HYDROL_1coord: 66..79
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01196PEPT_TRNA_HYDROL_2coord: 159..169