Cla97C05G092240 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G092240
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Unknown protein
Location	Cla97Chr05 : 10334982 .. 10336181 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGTTGTGCTAGCAAGCCAAAGACAATCACTGAGAAAGAAGCCACCCCATTGCCTGTCCCCGTCGTCGAAGAGAAGGAGAGGACAATGGCGATACCAACTCTCTTGGAGAAGGAAGTGAAGGTCGAAAATGAAGAAAAAAAGAGTGATTATCAAATTGATGAGAAGAAGGTTGACGAGGGAGAAAAGAAGGTTGAGGAGGATGGCCAACCGCTCTCTCTTGGATGTTTGCTCATTCAGGTTATTGCTTAAAACTTACTTAATGCTTGTTTATTGTCTTTCTTTTTTACAAAATTACTTCAAAACATATCTTAAATAATTTCAAGTCAACCAAAGTAATTTTAATTATTTTGAACTAATTTCTAACCCTGCCCGAAGAATTTCCTCCCATATTTAGGCAAACTAACTATGTATCTATTTTATTTATTTATTTTTTTTTTTTTAAAGGAAATTCTCTTTTTTTCTTTTTTCAATAAAACAATTTATTTATTTTATTTTTTATTTTAGGACAAAAAAGAAGTAGAAATTCCAACCGAGACCAAAAAAGAGCCCAAAGAAGAAGTGAAGGTTGAGGCAGCGAAACCAATAGATGCAGCTCCAGCAGCTGTCGTCGTTGCACCGGCGATGGCTGAACCCCAAAAACCCATCGCCGAGGTAGCAGCGGCTAAACCCCAAAAACCCATCGCCGTCGTCGAGGCTGAGCCTCAAAATCCCATCGCCATCGTCGAGGCTGAGGCCCAAAATCCCATCGCCGTCGTCGAGGCTGAGGCCCAAAAACCCATCGCCGTCGTTGAGGCTGAGCCCCAAAAACCCATCGCCGTCGTCGATGAGCCCCAAAAACCCATCGCCGTCGTCGATGAGCTCCAAAAACCCATCGCCGTCGTCGAGCCAGCTGCGCCCCAAAAACCCATCGCCGTCGTCGAGCCAGCTGAACCCCAAAAACCCATCGCCGTCGTCCTGCCGCTAGCTGAACCCCAAAAACCCTTGCCGGTAGCTGTAGCTGAACCCCAAAAACCCATCGTCTTGCCGGTAGCTGAACCCAATAAACCCACCGTCGAGGTAGCGGCATCCCCAAAAGGCATCGAAGTGGAGAAGAAAACCACCATGGAGGCACCGTCATTGGAGAAGAAAACAACTGCAACCACCGAACCATCACCAGCGGTGGCAGTGGCGGCAGTGACAACAGAAAAGCAATGA

mRNA sequence

ATGGGTGGTTGTGCTAGCAAGCCAAAGACAATCACTGAGAAAGAAGCCACCCCATTGCCTGTCCCCGTCGTCGAAGAGAAGGAGAGGACAATGGCGATACCAACTCTCTTGGAGAAGGAAGTGAAGGTCGAAAATGAAGAAAAAAAGAGTGATTATCAAATTGATGAGAAGAAGGTTGACGAGGGAGAAAAGAAGGTTGAGGAGGATGGCCAACCGCTCTCTCTTGGATGTTTGCTCATTCAGGACAAAAAAGAAGTAGAAATTCCAACCGAGACCAAAAAAGAGCCCAAAGAAGAAGTGAAGGTTGAGGCAGCGAAACCAATAGATGCAGCTCCAGCAGCTGTCGTCGTTGCACCGGCGATGGCTGAACCCCAAAAACCCATCGCCGAGGTAGCAGCGGCTAAACCCCAAAAACCCATCGCCGTCGTCGAGGCTGAGCCTCAAAATCCCATCGCCATCGTCGAGGCTGAGGCCCAAAATCCCATCGCCGTCGTCGAGGCTGAGGCCCAAAAACCCATCGCCGTCGTTGAGGCTGAGCCCCAAAAACCCATCGCCGTCGTCGATGAGCCCCAAAAACCCATCGCCGTCGTCGATGAGCTCCAAAAACCCATCGCCGTCGTCGAGCCAGCTGCGCCCCAAAAACCCATCGCCGTCGTCGAGCCAGCTGAACCCCAAAAACCCATCGCCGTCGTCCTGCCGCTAGCTGAACCCCAAAAACCCTTGCCGGTAGCTGTAGCTGAACCCCAAAAACCCATCGTCTTGCCGGTAGCTGAACCCAATAAACCCACCGTCGAGGTAGCGGCATCCCCAAAAGGCATCGAAGTGGAGAAGAAAACCACCATGGAGGCACCGTCATTGGAGAAGAAAACAACTGCAACCACCGAACCATCACCAGCGGTGGCAGTGGCGGCAGTGACAACAGAAAAGCAATGA

Coding sequence (CDS)

ATGGGTGGTTGTGCTAGCAAGCCAAAGACAATCACTGAGAAAGAAGCCACCCCATTGCCTGTCCCCGTCGTCGAAGAGAAGGAGAGGACAATGGCGATACCAACTCTCTTGGAGAAGGAAGTGAAGGTCGAAAATGAAGAAAAAAAGAGTGATTATCAAATTGATGAGAAGAAGGTTGACGAGGGAGAAAAGAAGGTTGAGGAGGATGGCCAACCGCTCTCTCTTGGATGTTTGCTCATTCAGGACAAAAAAGAAGTAGAAATTCCAACCGAGACCAAAAAAGAGCCCAAAGAAGAAGTGAAGGTTGAGGCAGCGAAACCAATAGATGCAGCTCCAGCAGCTGTCGTCGTTGCACCGGCGATGGCTGAACCCCAAAAACCCATCGCCGAGGTAGCAGCGGCTAAACCCCAAAAACCCATCGCCGTCGTCGAGGCTGAGCCTCAAAATCCCATCGCCATCGTCGAGGCTGAGGCCCAAAATCCCATCGCCGTCGTCGAGGCTGAGGCCCAAAAACCCATCGCCGTCGTTGAGGCTGAGCCCCAAAAACCCATCGCCGTCGTCGATGAGCCCCAAAAACCCATCGCCGTCGTCGATGAGCTCCAAAAACCCATCGCCGTCGTCGAGCCAGCTGCGCCCCAAAAACCCATCGCCGTCGTCGAGCCAGCTGAACCCCAAAAACCCATCGCCGTCGTCCTGCCGCTAGCTGAACCCCAAAAACCCTTGCCGGTAGCTGTAGCTGAACCCCAAAAACCCATCGTCTTGCCGGTAGCTGAACCCAATAAACCCACCGTCGAGGTAGCGGCATCCCCAAAAGGCATCGAAGTGGAGAAGAAAACCACCATGGAGGCACCGTCATTGGAGAAGAAAACAACTGCAACCACCGAACCATCACCAGCGGTGGCAGTGGCGGCAGTGACAACAGAAAAGCAATGA

Protein sequence

MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEEKKSDYQIDEKKVDEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKKEPKEEVKVEAAKPIDAAPAAVVVAPAMAEPQKPIAEVAAAKPQKPIAVVEAEPQNPIAIVEAEAQNPIAVVEAEAQKPIAVVEAEPQKPIAVVDEPQKPIAVVDELQKPIAVVEPAAPQKPIAVVEPAEPQKPIAVVLPLAEPQKPLPVAVAEPQKPIVLPVAEPNKPTVEVAASPKGIEVEKKTTMEAPSLEKKTTATTEPSPAVAVAAVTTEKQ

Homology

[Close]

BLAST of Cla97C05G092240 vs. NCBI nr
Match: XP_016901902.1 (PREDICTED: probable serine/threonine-protein kinase kinX [Cucumis melo])

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15
Identity = 66/115 (57.39%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 1   MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEEKKSDYQIDEKKVD 60
           MGGCASKPKT  EKE TPLPV    E+ +   +P    KE KVEN EK+SD         
Sbjct: 1   MGGCASKPKTGIEKEVTPLPV----EESKKEVVP----KEAKVENGEKESDDXXXXXXXX 60

Query: 61  EGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKKE-PKEEVKVEAAKPIDAAPAA 115
                 EED QPLSLGCLLIQDKKEVEIPTETKKE          AKPI+AAP A
Sbjct: 61  XXXXXXEEDTQPLSLGCLLIQDKKEVEIPTETKKEXXXXXXXXXXAKPIEAAPEA 107

[Close]

BLAST of Cla97C05G092240 vs. NCBI nr
Match: KGN57553.1 (hypothetical protein Csa_3G210480 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 2.4e-14
Identity = 60/96 (62.50%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 1  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVEN-EEKKSDYQIDEKKV 60
          MGGCASKPKT  EKE TPLP   VEE ++   I  +L KE K EN  EK+SD Q+     
Sbjct: 1  MGGCASKPKTSIEKEVTPLP---VEESKKETTIMAVL-KEAKHENGSEKESDDQVXXXXX 60

Query: 61 DEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKKE 96
                 EED QPLSLGCLLIQDKKEVEIPTETKKE
Sbjct: 61 XXXXXXXEEDIQPLSLGCLLIQDKKEVEIPTETKKE 92

[Close]

BLAST of Cla97C05G092240 vs. NCBI nr
Match: XP_011651254.1 (PREDICTED: histone H1-II-like [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 2.4e-14
Identity = 60/96 (62.50%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 1  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVEN-EEKKSDYQIDEKKV 60
          MGGCASKPKT  EKE TPLP   VEE ++   I  +L KE K EN  EK+SD Q+     
Sbjct: 1  MGGCASKPKTSIEKEVTPLP---VEESKKETTIMAVL-KEAKHENGSEKESDDQVXXXXX 60

Query: 61 DEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKKE 96
                 EED QPLSLGCLLIQDKKEVEIPTETKKE
Sbjct: 61 XXXXXXXEEDIQPLSLGCLLIQDKKEVEIPTETKKE 92

[Close]

BLAST of Cla97C05G092240 vs. TrEMBL
Match: tr|A0A1S4E0Y5|A0A1S4E0Y5_CUCME (probable serine/threonine-protein kinase kinX OS=Cucumis melo OX=3656 GN=LOC103496142 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 8.4e-16
Identity = 66/115 (57.39%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 1   MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVENEEKKSDYQIDEKKVD 60
           MGGCASKPKT  EKE TPLPV    E+ +   +P    KE KVEN EK+SD         
Sbjct: 1   MGGCASKPKTGIEKEVTPLPV----EESKKEVVP----KEAKVENGEKESDDXXXXXXXX 60

Query: 61  EGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKKE-PKEEVKVEAAKPIDAAPAA 115
                 EED QPLSLGCLLIQDKKEVEIPTETKKE          AKPI+AAP A
Sbjct: 61  XXXXXXEEDTQPLSLGCLLIQDKKEVEIPTETKKEXXXXXXXXXXAKPIEAAPEA 107

[Close]

BLAST of Cla97C05G092240 vs. TrEMBL
Match: tr|A0A0A0L739|A0A0A0L739_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G210480 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.6e-14
Identity = 60/96 (62.50%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 1  MGGCASKPKTITEKEATPLPVPVVEEKERTMAIPTLLEKEVKVEN-EEKKSDYQIDEKKV 60
          MGGCASKPKT  EKE TPLP   VEE ++   I  +L KE K EN  EK+SD Q+     
Sbjct: 1  MGGCASKPKTSIEKEVTPLP---VEESKKETTIMAVL-KEAKHENGSEKESDDQVXXXXX 60

Query: 61 DEGEKKVEEDGQPLSLGCLLIQDKKEVEIPTETKKE 96
                 EED QPLSLGCLLIQDKKEVEIPTETKKE
Sbjct: 61 XXXXXXXEEDIQPLSLGCLLIQDKKEVEIPTETKKE 92

The following BLAST results are available for this feature:

BLAST of Cla97C05G092240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901902.1	1.3e-15	57.39	PREDICTED: probable serine/threonine-protein kinase kinX [Cucumis melo]	[more]
KGN57553.1	2.4e-14	62.50	hypothetical protein Csa_3G210480 [Cucumis sativus]	[more]
XP_011651254.1	2.4e-14	62.50	PREDICTED: histone H1-II-like [Cucumis sativus]	[more]

BLAST of Cla97C05G092240 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E0Y5\|A0A1S4E0Y5_CUCME	8.4e-16	57.39	probable serine/threonine-protein kinase kinX OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A0A0L739\|A0A0A0L739_CUCSA	1.6e-14	62.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G210480 PE=4 SV=1	[more]

BLAST of Cla97C05G092240 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C05G092240 vs. TAIR10


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0051641	cellular localization
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0043232	intracellular non-membrane-bounded organelle
cellular_component	GO:0044446	intracellular organelle part
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G092240.1	Cla97C05G092240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..310

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G092240	Cla013053	Watermelon (97103) v1	wmwmbB206
Cla97C05G092240	Csa3G210480	Cucumber (Chinese Long) v2	cuwmbB215
Cla97C05G092240	ClCG05G009850	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G092240	CSPI03G18690	Wild cucumber (PI 183967)	cpiwmbB221
Cla97C05G092240	Lsi05G001990	Bottle gourd (USVL1VR-Ls)	lsiwmbB329
Cla97C05G092240	CsGy3G018530	Cucumber (Gy14) v2	cgybwmbB206
Cla97C05G092240	CsaV3_3G018740	Cucumber (Chinese Long) v3	cucwmbB217
Cla97C05G092240	Bhi01G001241	Wax gourd	wgowmbB179

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G092240	Silver-seed gourd	carwmbB0395
Cla97C05G092240	Silver-seed gourd	carwmbB0396
Cla97C05G092240	Silver-seed gourd	carwmbB0681
Cla97C05G092240	Cucurbita maxima (Rimu)	cmawmbB347
Cla97C05G092240	Cucurbita maxima (Rimu)	cmawmbB763
Cla97C05G092240	Cucurbita moschata (Rifu)	cmowmbB332
Cla97C05G092240	Cucurbita moschata (Rifu)	cmowmbB735
Cla97C05G092240	Melon (DHL92) v3.6.1	medwmbB424
Cla97C05G092240	Melon (DHL92) v3.5.1	mewmbB434