Cla97C05G085400 (gene) Watermelon (97103) v2

NameCla97C05G085400
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionAt1g04330-like protein
LocationCla97Chr05 : 4025390 .. 4025683 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGATGCAGAGAGAAAAAGCCAGTGCCAAGCGCCGACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCGCCGAATTGGAACATGGCCATACCCTTGTTATCCCCTCTTGTATCACCTTCGTCTTGTGGGAATCCAGGGCAAGAGGAAGCCTTGTTGATGGCTGAGAATAAAGCGAGGGAGGAAGCCAAAGGGCTAAGCTTTACCAAATGGCAGCACCCTGCGGCTCCATTTTATTATGGGCCAGTCCCAAGGGCCACCCCCTTTGTGCCCGTGTGA

mRNA sequence

ATGGGCGATGCAGAGAGAAAAAGCCAGTGCCAAGCGCCGACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCGCCGAATTGGAACATGGCCATACCCTTGTTATCCCCTCTTGTATCACCTTCGTCTTGTGGGAATCCAGGGCAAGAGGAAGCCTTGTTGATGGCTGAGAATAAAGCGAGGGAGGAAGCCAAAGGGCTAAGCTTTACCAAATGGCAGCACCCTGCGGCTCCATTTTATTATGGGCCAGTCCCAAGGGCCACCCCCTTTGTGCCCGTGTGA

Coding sequence (CDS)

ATGGGCGATGCAGAGAGAAAAAGCCAGTGCCAAGCGCCGACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCGCCGAATTGGAACATGGCCATACCCTTGTTATCCCCTCTTGTATCACCTTCGTCTTGTGGGAATCCAGGGCAAGAGGAAGCCTTGTTGATGGCTGAGAATAAAGCGAGGGAGGAAGCCAAAGGGCTAAGCTTTACCAAATGGCAGCACCCTGCGGCTCCATTTTATTATGGGCCAGTCCCAAGGGCCACCCCCTTTGTGCCCGTGTGA

Protein sequence

MGDAERKSQCQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGQEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV
BLAST of Cla97C05G085400 vs. NCBI nr
Match: KGN56887.1 (hypothetical protein Csa_3G141830 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34
Identity = 79/98 (80.61%), Postives = 83/98 (84.69%), Query Frame = 0

Query: 1  MGDAERKSQCQ-APTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGQEEALLM 60
          M DAERK+    APTRLQSQAPASIEIKRA NWN+AIPLLSPLVSPSSCGN   E+ L M
Sbjct: 1  MSDAERKTATTVAPTRLQSQAPASIEIKRALNWNVAIPLLSPLVSPSSCGNSAPEKMLSM 60

Query: 61 AENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV 98
          AEN AREE KGL+FTKWQHPAAPFYY PVPRA PFVPV
Sbjct: 61 AENNAREETKGLTFTKWQHPAAPFYYEPVPRANPFVPV 98

BLAST of Cla97C05G085400 vs. NCBI nr
Match: XP_022143991.1 (uncharacterized protein At4g14450, chloroplastic-like [Momordica charantia])

HSP 1 Score: 112.5 bits (280), Expect = 8.3e-22
Identity = 63/105 (60.00%), Postives = 75/105 (71.43%), Query Frame = 0

Query: 1   MGDAERK----SQCQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGQEEA 60
           MGDAER+    S  Q  TRLQ +AP+SI+I R  +WN+AIPLLSPLVSP       ++  
Sbjct: 1   MGDAERRGAGDSVSQEATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCL-----EQVD 60

Query: 61  LLMAENKAREEA----KGLSFTKWQHPAAPFYYGPVPRATPFVPV 98
           +LM ENKAREEA    K  +FT+W+HPAAPFYYGPV R TPFVPV
Sbjct: 61  VLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV 100

BLAST of Cla97C05G085400 vs. NCBI nr
Match: XP_022924297.1 (AT-hook motif nuclear-localized protein 20-like [Cucurbita moschata])

HSP 1 Score: 109.8 bits (273), Expect = 5.4e-21
Identity = 58/87 (66.67%), Postives = 65/87 (74.71%), Query Frame = 0

Query: 1  MGDAERKSQCQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGQEEALLMA 60
          M  +ER++    PTRLQSQAPASI I RA NWN+AIPLL+PLVS S CGN  Q + LLM 
Sbjct: 1  MAGSERRN--TPPTRLQSQAPASIVINRASNWNVAIPLLTPLVSASPCGNSSQ-DVLLMG 60

Query: 61 ENKAREEAKGLSFTKWQHPAAPFYYGP 88
          ENKAREE KGL+ TKWQHPA PF   P
Sbjct: 61 ENKAREETKGLNVTKWQHPACPFLANP 84

BLAST of Cla97C05G085400 vs. NCBI nr
Match: XP_023526926.1 (AT-hook motif nuclear-localized protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.0 bits (271), Expect = 9.2e-21
Identity = 58/87 (66.67%), Postives = 65/87 (74.71%), Query Frame = 0

Query: 1  MGDAERKSQCQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGQEEALLMA 60
          M  +ER++    PTRLQSQAPASI I RA NWN+AIPLL+PLVS S CGN  Q + LL A
Sbjct: 1  MAGSERRN--TPPTRLQSQAPASIVINRASNWNVAIPLLTPLVSASPCGNSSQ-DVLLTA 60

Query: 61 ENKAREEAKGLSFTKWQHPAAPFYYGP 88
          ENKAREE KGL+ TKWQHPA PF   P
Sbjct: 61 ENKAREETKGLTVTKWQHPACPFLANP 84

BLAST of Cla97C05G085400 vs. NCBI nr
Match: POE74178.1 (uncharacterized protein, chloroplastic [Quercus suber])

HSP 1 Score: 87.4 bits (215), Expect = 2.9e-14
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 0

Query: 1   MGDAERK-----SQCQAPTRLQSQAPASIEI--KRAPNWNMAIPLLSPLVSPSSCGNPGQ 60
           M D++R      S+CQ P+RLQ +APAS++I    +  WN+AIPLLSPL +  +    G 
Sbjct: 1   MADSQRNKSGTGSRCQ-PSRLQRRAPASLQIAAPASSTWNVAIPLLSPLATSPTSPKLGA 60

Query: 61  EEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV 98
           +E   + +  +  E + + F KWQHPAAPF YGP PR  PFVPV
Sbjct: 61  DEPRQLQQQSSVAETEKVGFKKWQHPAAPFGYGPAPRGRPFVPV 103

BLAST of Cla97C05G085400 vs. TrEMBL
Match: tr|A0A0A0L8D3|A0A0A0L8D3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141830 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 9.6e-35
Identity = 79/98 (80.61%), Postives = 83/98 (84.69%), Query Frame = 0

Query: 1  MGDAERKSQCQ-APTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGQEEALLM 60
          M DAERK+    APTRLQSQAPASIEIKRA NWN+AIPLLSPLVSPSSCGN   E+ L M
Sbjct: 1  MSDAERKTATTVAPTRLQSQAPASIEIKRALNWNVAIPLLSPLVSPSSCGNSAPEKMLSM 60

Query: 61 AENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV 98
          AEN AREE KGL+FTKWQHPAAPFYY PVPRA PFVPV
Sbjct: 61 AENNAREETKGLTFTKWQHPAAPFYYEPVPRANPFVPV 98

BLAST of Cla97C05G085400 vs. TrEMBL
Match: tr|A0A2P4J088|A0A2P4J088_QUESU (Uncharacterized protein, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_44155 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-14
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 0

Query: 1   MGDAERK-----SQCQAPTRLQSQAPASIEI--KRAPNWNMAIPLLSPLVSPSSCGNPGQ 60
           M D++R      S+CQ P+RLQ +APAS++I    +  WN+AIPLLSPL +  +    G 
Sbjct: 1   MADSQRNKSGTGSRCQ-PSRLQRRAPASLQIAAPASSTWNVAIPLLSPLATSPTSPKLGA 60

Query: 61  EEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV 98
           +E   + +  +  E + + F KWQHPAAPF YGP PR  PFVPV
Sbjct: 61  DEPRQLQQQSSVAETEKVGFKKWQHPAAPFGYGPAPRGRPFVPV 103

BLAST of Cla97C05G085400 vs. TrEMBL
Match: tr|A0A2N9IRN2|A0A2N9IRN2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54732 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-13
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 0

Query: 8   SQCQAPTRLQSQAPASIEIKR-APNWNMAIPLLSPLVSPSSCGNPGQEEALLMAENKARE 67
           ++ Q P+RLQ +APAS++I   +P WN+AIPLLSPL +  +    G +E   + + +   
Sbjct: 13  NRSQQPSRLQRRAPASLQISTPSPAWNVAIPLLSPLAASPTSPKLGIDEPRQLQQPQIVT 72

Query: 68  EAKGLSFTKWQHPAAPFYYGPVPRATPFVPV 98
           E + ++F KWQHPAAPF YG  PR  PF+PV
Sbjct: 73  EPEKVAFKKWQHPAAPFSYGQAPRVRPFLPV 103

BLAST of Cla97C05G085400 vs. TrEMBL
Match: tr|I1NI17|I1NI17_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102662199 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.7e-13
Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = 0

Query: 1  MGDAERKSQCQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGQEEALLMA 60
          M + +  +  + P+RLQ +AP+S++I RA  WN+AIPLLSPL S     +P   E     
Sbjct: 1  MSNPQTNNNRRQPSRLQRRAPSSLQINRAVEWNVAIPLLSPLAS-----SPTPIELKPPQ 60

Query: 61 ENKAREEAK-GLSFTKWQHPAAPFYYGPVPRATPFVPV 98
          E   RE  K  LSF KWQHPAAPF Y P P   PFVPV
Sbjct: 61 EPPQREPEKVTLSFKKWQHPAAPFCYEPAPMVPPFVPV 93

BLAST of Cla97C05G085400 vs. TrEMBL
Match: tr|I1LCD2|I1LCD2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100809114 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-12
Identity = 47/98 (47.96%), Postives = 58/98 (59.18%), Query Frame = 0

Query: 1  MGDAERKSQCQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGQEEALLMA 60
          M + +  +    P+RLQ +AP+S++I RA  WN+AIPLLSPL S     +P   E     
Sbjct: 1  MSNPQTNNNRHQPSRLQRRAPSSLQINRAVEWNVAIPLLSPLAS-----SPPPMELKPPQ 60

Query: 61 ENKAREEAK-GLSFTKWQHPAAPFYYGPVPRATPFVPV 98
          E   RE  K  +SF KWQHPAAPF Y P P   PFVPV
Sbjct: 61 EPPQREAEKVTVSFKKWQHPAAPFCYEPAPMVPPFVPV 93

BLAST of Cla97C05G085400 vs. Swiss-Prot
Match: sp|Q6NN02|Y4445_ARATH (Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.0e-06
Identity = 36/92 (39.13%), Postives = 50/92 (54.35%), Query Frame = 0

Query: 14  TRLQSQAPA-SIEIKRAPNWNMAIPLLSPLVSPSSCGN-------PGQEEALLMAENKAR 73
           ++LQ +AP+  I+     NWN+AIPLLSPL +PS   +       P Q +  +  E + +
Sbjct: 38  SQLQRRAPSLMIKPTSFSNWNVAIPLLSPL-APSLTSSFDQSHVPPPQNKTEIPVEEEVK 97

Query: 74  EEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV 98
              K   F KWQHPA+PF Y P     PF+ V
Sbjct: 98  ---KTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

BLAST of Cla97C05G085400 vs. TAIR10
Match: AT1G04330.1 (unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-10
Identity = 42/97 (43.30%), Postives = 53/97 (54.64%), Query Frame = 0

Query: 2  GDAERKSQCQAPTRLQSQAPASIEIKRA-PNWNMAIPLLSPLVSPSSCGNPGQEEALLMA 61
          G   RKS     +RLQ +AP  ++I     NW +AIPLLSP  SP     P +  A++  
Sbjct: 10 GSGNRKS-----SRLQRRAPPPLKINPCEANWKVAIPLLSPTESP-----PQKPPAVMKR 69

Query: 62 ENK--AREEAKGLSFTKWQHPAAPFYYGPVPRAT-PF 95
          E +   +E  K   F KWQHPAAPFYY P P +  PF
Sbjct: 70 EEQRWGKEAEKPPVFKKWQHPAAPFYYQPAPSSNQPF 96

BLAST of Cla97C05G085400 vs. TAIR10
Match: AT3G23170.1 (unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 4.0e-10
Identity = 43/100 (43.00%), Postives = 53/100 (53.00%), Query Frame = 0

Query: 2   GDAERKSQCQAPTRLQSQAPASIEIKRAP---NWNMAIPLLSPL-VSPSSCGNPGQEEAL 61
           GD  R+     P+RL  + PA   +   P   NWN AIPLLSPL +SP S  +P  +  +
Sbjct: 15  GDLRRQ-----PSRLLKRPPALKIVPATPAANNWNTAIPLLSPLALSPES--SPVDQPPV 74

Query: 62  LMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV 98
              ++ A    K   F KWQHPAAPFYY       PFVPV
Sbjct: 75  EKNQSTAVAVEKTPVFKKWQHPAAPFYYESSTFVPPFVPV 107

BLAST of Cla97C05G085400 vs. TAIR10
Match: AT4G14450.1 (unknown protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.1e-07
Identity = 36/92 (39.13%), Postives = 50/92 (54.35%), Query Frame = 0

Query: 14  TRLQSQAPA-SIEIKRAPNWNMAIPLLSPLVSPSSCGN-------PGQEEALLMAENKAR 73
           ++LQ +AP+  I+     NWN+AIPLLSPL +PS   +       P Q +  +  E + +
Sbjct: 38  SQLQRRAPSLMIKPTSFSNWNVAIPLLSPL-APSLTSSFDQSHVPPPQNKTEIPVEEEVK 97

Query: 74  EEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV 98
              K   F KWQHPA+PF Y P     PF+ V
Sbjct: 98  ---KTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN56887.11.5e-3480.61hypothetical protein Csa_3G141830 [Cucumis sativus][more]
XP_022143991.18.3e-2260.00uncharacterized protein At4g14450, chloroplastic-like [Momordica charantia][more]
XP_022924297.15.4e-2166.67AT-hook motif nuclear-localized protein 20-like [Cucurbita moschata][more]
XP_023526926.19.2e-2166.67AT-hook motif nuclear-localized protein 20-like [Cucurbita pepo subsp. pepo][more]
POE74178.12.9e-1446.15uncharacterized protein, chloroplastic [Quercus suber][more]
Match NameE-valueIdentityDescription
tr|A0A0A0L8D3|A0A0A0L8D3_CUCSA9.6e-3580.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141830 PE=4 SV=1[more]
tr|A0A2P4J088|A0A2P4J088_QUESU1.9e-1446.15Uncharacterized protein, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_44155 ... [more]
tr|A0A2N9IRN2|A0A2N9IRN2_FAGSY3.6e-1346.15Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54732 PE=4 SV=1[more]
tr|I1NI17|I1NI17_SOYBN4.7e-1348.98Uncharacterized protein OS=Glycine max OX=3847 GN=102662199 PE=4 SV=1[more]
tr|I1LCD2|I1LCD2_SOYBN1.0e-1247.96Uncharacterized protein OS=Glycine max OX=3847 GN=100809114 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
sp|Q6NN02|Y4445_ARATH2.0e-0639.13Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Match NameE-valueIdentityDescription
AT1G04330.11.4e-1043.30unknown protein[more]
AT3G23170.14.0e-1043.00unknown protein[more]
AT4G14450.11.1e-0739.13unknown protein[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G085400.1Cla97C05G085400.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR33912FAMILY NOT NAMEDcoord: 7..95
NoneNo IPR availablePANTHERPTHR33912:SF2F22G5.17coord: 7..95

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G085400Watermelon (97103) v2wmbwmbB137
Cla97C05G085400Watermelon (97103) v2wmbwmbB141
Cla97C05G085400Silver-seed gourdcarwmbB0229
Cla97C05G085400Silver-seed gourdcarwmbB0236
Cla97C05G085400Silver-seed gourdcarwmbB1008
Cla97C05G085400Silver-seed gourdcarwmbB0817
Cla97C05G085400Silver-seed gourdcarwmbB1131
Cla97C05G085400Cucumber (Gy14) v2cgybwmbB124
Cla97C05G085400Cucumber (Gy14) v2cgybwmbB196
Cla97C05G085400Cucumber (Gy14) v1cgywmbB657
Cla97C05G085400Cucurbita maxima (Rimu)cmawmbB004
Cla97C05G085400Cucurbita maxima (Rimu)cmawmbB263
Cla97C05G085400Cucurbita maxima (Rimu)cmawmbB366
Cla97C05G085400Cucurbita maxima (Rimu)cmawmbB648
Cla97C05G085400Cucurbita maxima (Rimu)cmawmbB856
Cla97C05G085400Cucurbita maxima (Rimu)cmawmbB914
Cla97C05G085400Cucurbita moschata (Rifu)cmowmbB243
Cla97C05G085400Cucurbita moschata (Rifu)cmowmbB350
Cla97C05G085400Cucurbita moschata (Rifu)cmowmbB622
Cla97C05G085400Cucurbita moschata (Rifu)cmowmbB833
Cla97C05G085400Cucurbita moschata (Rifu)cmowmbB886
Cla97C05G085400Wild cucumber (PI 183967)cpiwmbB133
Cla97C05G085400Cucumber (Chinese Long) v3cucwmbB134
Cla97C05G085400Cucumber (Chinese Long) v3cucwmbB206
Cla97C05G085400Cucumber (Chinese Long) v2cuwmbB131
Cla97C05G085400Bottle gourd (USVL1VR-Ls)lsiwmbB015
Cla97C05G085400Melon (DHL92) v3.6.1medwmbB374
Cla97C05G085400Melon (DHL92) v3.6.1medwmbB423
Cla97C05G085400Melon (DHL92) v3.5.1mewmbB384
Cla97C05G085400Watermelon (Charleston Gray)wcgwmbB269
Cla97C05G085400Watermelon (Charleston Gray)wcgwmbB304
Cla97C05G085400Watermelon (97103) v1wmwmbB161
Cla97C05G085400Watermelon (97103) v1wmwmbB402
Cla97C05G085400Wax gourdwgowmbB257