Cla97C05G080690 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G080690
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	ATP synthase delta chain, chloroplastic
Location	Cla97Chr05 : 680338 .. 683788 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACTTTGACAACAACCTCTGTTTCAACTCTCAGAGTTCCATCAGCCCTAACTTCATCTCGTGACCTTCTTCACCTCAAGAATCCCACCGCTCATCTACCTCATCGCTCCCCTTCTCTTTCATCCAACTCAATCTCAAAACCCCCTAGTTTTCTCTCCCCTCACAAAACCCTAAATCCCCTCCCGTTTTCCTCCCCCCGCCGCTCCTCTTCTCCGCTCCTCCACCGCCGCCCCGCCGCCGGATACGCCGCCGCACTCATCGACGCGTCTCAATCCACCGGGGCGATTCACTCGGTGGCGAGGGATGTCGGAAGATTCTCGAAGCTCCTGAGAGGGAAGCGAATCGGAGGGTTTTTGAACAATCCGTTGGTCGGGGAGGAGGAGAAAGGGCGATTGGTGAGGGAAATTGCAGTGAAGGGAGGGTTTGAGAGGCAGGTGGTGAGGTTGACAAAGATGCTGGTTGAGAAGAACAGAGTAGGGATTTTGAAAGAGGTGTTGAGCGAATTCGAGAGGATTTATGATGAGCTTTGTGGAACGGAAGTGGTGATGGTTTCTTCGAGCAAGAAGATGGAGGAAGAGGAGTTGTTTGGGATTGCGGAGAATGTGCAGAGGCTGACTGGGGCTGTGAAAGTGAAGGTCAGAAGCTTCGTTCATGGCGGATTAATGGCGTAAATACAATTTGTTAGTTATGAAGTTTGTAACTCGTATGAACCATTGCAAAGATTTCAGGACGCTGTTGTTTAACAAAATTGTTCAATTAAAGTTCTTAGGTACAATCTTAATTTACAACATCACATTATAGAGGAAATGTTTCTAATCCAAAACCAAATTTGGAAATCAAAGGATATGTGACAATAGGGCAATTTTGATTGTGGAGTTCTTTGGTTAAATTAAATCATGTATAGTTAATATATTGTAAAATAATAACTATACAAACTGCTTAACACATAATATGTTCATAGTTTTGTAATAAGAATTCACATTCAGCTTAATATACCGTACACGTTTTGAACCATGAACATTAAAATTTGAAATTTAACCTTAATTTTTTAATTAAACTTTTTATGATAGTAGATAGATTAAACTATTTGTTAATACCAAATTTGGACAAGGTAAATGCATACTTAATTTCTACATTTGTATACTGGTGTGGTGCAGTGCTTGTCACACAGACTCCAGTACTTAGTAGCAAATAATTATATGTAGCAAAAAAAGGAAATTTTAATGTGAGAGTGAAGTTACTTTCTTTGGTGTATCCTCCTTTATAGAAGTTCCCTAGCCTAACCCTTTTTTCTTTAGGGTTTTCGAGTTGTTTCTTGAGCCCCAAATCTCATTCTCAAGCTTTTTTCTACCAAACAACCCCCACTAAGGGGGTGTGTTCTCAAGGTCAACCTTAGCTTGGGCTAAGGCTGAGTCTTACGGCATGTGATTTGGTCATACCACTTCTTCTCTCCTAGCCTTGTCTCATCTCGGGCCTTGGCGTTTGACTCGCTTCTTGATTCCTCCACATTTTATTCTTCATGATTTTGCCCCTAAAATCCAAAATGACTCATAATAATACTATTTTGGAAATTGTTCGATTTTAGTTCATGTACTTTCATATGAAGTAAATAAAATAAAATTGAGCCAATGTTGAAAGTATTTATCTAAATAAAAATTAAGATATATATTGGATTTTTTGAAAAAAATTCGAGATAAAAATAAGAAAATAATAAAATTTACGGATCAACAACTGAATGGACTCAGAATTGGGCCTTCTTCCACTTGAAGCCCAATCTATCTCATCCTCTTCAAAATTTAAATCCCCAAAATACCCCTTTGGCAGTCAACGGTGAAACCTTTGATCATGAAAGTCAGACAATCAGACGGTCTAAAAAGAACATCATCAACAGTTGAGCTTTTGTTTCGCTGTTTATAATGAATCGAATTGCGTCATTATTCATTAGGGCTTCGTAAAAAAGACTCAGCCTTTCTCTTCCTCTCTCATAGGGTTTCTCAGTTCTGTTCGAATCCGAGAATCTGCGAGGTTTGTTCTCTTTAATCCTTTGATGGTTGATCCTCGCTGTTCTATGTTTCCTTCATATGCTACGTGGTCCTTTTATTTTTGGCTTCTGGTCAAACCCCGAAACTAAGTTCGTCTGCGCTGATTTGCTTTCCCCCTCTAATCTCATTTATCTCATATGGTCTGATTGGAGAGAAAATAACTCGAATCATGTTGATGAAGTTGTTTATCCTTTTTTTTCTTTGGATGAAGCTGTTATCTTTTTTCACTTGGCATTTGATTAATGTTCGAACTTATAGGCTTAGCTTTGTTTCGGTTCAATATTTTCTGCAGCGCAATCATTAGTAGCAACGATGAGGCCTATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAGCTGGAGCGCTTATTCGCCAAATACGGGAGAGTTGAAAGGATCGACATGAAATCTGGTATATTACAATTTCTTTGCTATAGTATGCAATGCCATTTTAAACGATCATGTTATAAGATAGGTCATAACTTGTGCAGATTATATTGTACGAAGGATCCCTTTTTGTGGTCAGCTTCGAACGAATTGATTCTGTTGAATATTGCTCTTAAAACCTCTTTTTTGGTATTGACAATGGTGTAATGAGTGGGATGCAATGCTTGCTTAATTTATTTTTTGTTCAATGTGAAATTATGTCAAGATAATAGATGTACCAAAAGGATCTTGTTCATTTTGGTTAAGTTCATACGCATTGGATGGTGCATTTGGATAATTGGTGTATGTTTTTATTTGAAATCTTCGATGTTCCCTAAGAATCATACTTTTGTTGTGTGTCAGAGTGTGGTAGGCTACGTATGTATGCATTGATGGATGACACTTTGGTGTTGGTTTTACTTAGTATTGGCAAGTAGAATTCATACTTTTAAGCTTCCTAGTTTGGAATTTTTTTGTTACATGTGACTTTTTTGTACTTTGATTTCATCATTCGAATCATCTTACCTTTTCCTTTTTAACTGACCTTGGTTACTCTGGGTATGAGTTTTTAATGACGTTTATTTTCTTGATAACTTCCTTGGCCCTCACTCACCTTGCCTTACATCCTTAGTCTTACAAAGATATATTTCAATTTTTTGGGTATAGGGGTTTATTGATTTGTGGTATTTCAGCGGGAGGCTACTCCACTGATACTAACACTAATTGTAAAAGTAATATCACATTTTTATCAATAAAATTGATGTTTTTTAAATAATAAAATCCAGTTCAGTGACATGGATGCATAGCTATTATGCTATGAATAACATCCAATGGTCCATTTTTCTGATGAAAACTTAATGGCAGGCACAATTGCTATTTTATGGGGAAAACCTCCATATAAGATGTTTCTTTTGACGCAGGAATTTCTCCTAAGGAAAATGAGCCAAGCTCCTATCTGGGCTCACCACCATGA

mRNA sequence

ATGGATACTTTGACAACAACCTCTGTTTCAACTCTCAGAGTTCCATCAGCCCTAACTTCATCTCGTGACCTTCTTCACCTCAAGAATCCCACCGCTCATCTACCTCATCGCTCCCCTTCTCTTTCATCCAACTCAATCTCAAAACCCCCTAGTTTTCTCTCCCCTCACAAAACCCTAAATCCCCTCCCGTTTTCCTCCCCCCGCCGCTCCTCTTCTCCGCTCCTCCACCGCCGCCCCGCCGCCGGATACGCCGCCGCACTCATCGACGCGTCTCAATCCACCGGGGCGATTCACTCGGTGGCGAGGGATGTCGGAAGATTCTCGAAGCTCCTGAGAGGGAAGCGAATCGGAGGGTTTTTGAACAATCCGTTGGTCGGGGAGGAGGAGAAAGGGCGATTGGTGAGGGAAATTGCAGTGAAGGGAGGGTTTGAGAGGCAGGTGGTGAGGTTGACAAAGATGCTGGTTGAGAAGAACAGAGTAGGGATTTTGAAAGAGGTGTTGAGCGAATTCGAGAGGATTTATGATGAGCTTTGTGGAACGGAAGTGGTGATGGTTTCTTCGAGCAAGAAGATGGAGGAAGAGGAGTTGTTTGGGATTGCGGAGAATGTGCAGAGGCTGACTGGGGCTGTGAAAGTGAAGGGTTTCTCAGTTCTGTTCGAATCCGAGAATCTGCGAGCGCAATCATTAGTAGCAACGATGAGGCCTATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAGCTGGAGCGCTTATTCGCCAAATACGGGAGAGTTGAAAGGATCGACATGAAATCTGGAATTTCTCCTAAGGAAAATGAGCCAAGCTCCTATCTGGGCTCACCACCATGA

Coding sequence (CDS)

ATGGATACTTTGACAACAACCTCTGTTTCAACTCTCAGAGTTCCATCAGCCCTAACTTCATCTCGTGACCTTCTTCACCTCAAGAATCCCACCGCTCATCTACCTCATCGCTCCCCTTCTCTTTCATCCAACTCAATCTCAAAACCCCCTAGTTTTCTCTCCCCTCACAAAACCCTAAATCCCCTCCCGTTTTCCTCCCCCCGCCGCTCCTCTTCTCCGCTCCTCCACCGCCGCCCCGCCGCCGGATACGCCGCCGCACTCATCGACGCGTCTCAATCCACCGGGGCGATTCACTCGGTGGCGAGGGATGTCGGAAGATTCTCGAAGCTCCTGAGAGGGAAGCGAATCGGAGGGTTTTTGAACAATCCGTTGGTCGGGGAGGAGGAGAAAGGGCGATTGGTGAGGGAAATTGCAGTGAAGGGAGGGTTTGAGAGGCAGGTGGTGAGGTTGACAAAGATGCTGGTTGAGAAGAACAGAGTAGGGATTTTGAAAGAGGTGTTGAGCGAATTCGAGAGGATTTATGATGAGCTTTGTGGAACGGAAGTGGTGATGGTTTCTTCGAGCAAGAAGATGGAGGAAGAGGAGTTGTTTGGGATTGCGGAGAATGTGCAGAGGCTGACTGGGGCTGTGAAAGTGAAGGGTTTCTCAGTTCTGTTCGAATCCGAGAATCTGCGAGCGCAATCATTAGTAGCAACGATGAGGCCTATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAGCTGGAGCGCTTATTCGCCAAATACGGGAGAGTTGAAAGGATCGACATGAAATCTGGAATTTCTCCTAAGGAAAATGAGCCAAGCTCCTATCTGGGCTCACCACCATGA

Protein sequence

MDTLTTTSVSTLRVPSALTSSRDLLHLKNPTAHLPHRSPSLSSNSISKPPSFLSPHKTLNPLPFSSPRRSSSPLLHRRPAAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGKRIGGFLNNPLVGEEEKGRLVREIAVKGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIYDELCGTEVVMVSSSKKMEEEELFGIAENVQRLTGAVKVKGFSVLFESENLRAQSLVATMRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGISPKENEPSSYLGSPP

Homology

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BLAST of Cla97C05G080690 vs. NCBI nr
Match: XP_022975394.1 (ATP synthase delta chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 299.7 bits (766), Expect = 1.1e-77
Identity = 163/214 (76.17%), Postives = 183/214 (85.51%), Query Frame = 0


Query: 1   MDTLTTTSVSTLRVPSALTSSRDLLHLKNPTAHLPHRSPSLSSNSISKPPSFLSPHKT-X 60
           MDTL T+SVSTLRVPS L SSRDLLHLKN +AHLPHRSPS  SNSISKPP+FLS HKT  
Sbjct: 1   MDTL-TSSVSTLRVPSTLASSRDLLHLKNHSAHLPHRSPSRRSNSISKPPNFLSTHKTLN 60

Query: 61  XXXXXXXXXXXXXXXXXRRPAAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGKRIGGF 120
                            RRPAAGYAAAL+DASQ+TG+IHSVA+DVGRFSK+LR KRIGGF
Sbjct: 61  PFPFSSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKRIGGF 120

Query: 121 LNNPLVGEEEKGRLVREIAVKGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIYDELCG 180
           LN+P VGEEEKGRLVREIA KGGFE+QVV+LTKML+EK R+GIL EVLSEFERIYDELCG
Sbjct: 121 LNDPFVGEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYDELCG 180

Query: 181 TEVVMVSSSKKMEEEELFGIAENVQRLTGAVKVK 214
           TEVV+VSS++KM+EEELFGIA+NVQRL+GA+KVK
Sbjct: 181 TEVVLVSSNRKMQEEELFGIAKNVQRLSGAMKVK 213

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BLAST of Cla97C05G080690 vs. NCBI nr
Match: XP_022974855.1 (ATP synthase delta chain, chloroplastic-like [Cucurbita maxima] >XP_022974856.1 ATP synthase delta chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 297.7 bits (761), Expect = 4.1e-77
Identity = 171/219 (78.08%), Postives = 191/219 (87.21%), Query Frame = 0


Query: 1   MDTLTTTSVSTLRVPSALTSSRDLLHLKNPTAHLPHRSPSLSSNSISKPPSFLSPHKT-- 60
           MDTL T+SVSTLRVPS L SSRDLLHLKN +AHLPHRSPS  SNSISKPP+FLS HKT  
Sbjct: 1   MDTL-TSSVSTLRVPSTLASSRDLLHLKNHSAHLPHRSPSRRSNSISKPPNFLSTHKTLN 60

Query: 61  ----XXXXXXXXXXXXXXXXXXRRPAAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGK 120
                     XXXXXXXX    RRPAAGYAAAL+DASQ+TG+IHSVA+DVGRFSK+LR K
Sbjct: 61  PLPFSSSFSSXXXXXXXXPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTK 120

Query: 121 RIGGFLNNPLVGEEEKGRLVREIAVKGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIY 180
           RIGGFLN+P VGEEEKGRLVREIA KGGFE+QVV+LTKML+EK R+GIL EVLSEFERIY
Sbjct: 121 RIGGFLNDPFVGEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIY 180

Query: 181 DELCGTEVVMVSSSKKMEEEELFGIAENVQRLTGAVKVK 214
           DELCGTEVV+VSS++KM+EEELFGIA+NVQRL+GA+KVK
Sbjct: 181 DELCGTEVVLVSSNRKMQEEELFGIAKNVQRLSGAMKVK 218

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BLAST of Cla97C05G080690 vs. NCBI nr
Match: XP_023540771.1 (ATP synthase delta chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.8 bits (756), Expect = 1.5e-76
Identity = 169/219 (77.17%), Postives = 191/219 (87.21%), Query Frame = 0


Query: 1   MDTLTTTSVSTLRVPSALTSSRDLLHLKNPTAHLPHRSPSLSSNSISKPPSFLSPHKT-- 60
           MDTL T+SVSTLRVPS L SSRDL+HLKN +AHLPHRSPS  SNSISKPP+FLS HKT  
Sbjct: 1   MDTL-TSSVSTLRVPSTLASSRDLIHLKNHSAHLPHRSPSRRSNSISKPPNFLSTHKTLN 60

Query: 61  ----XXXXXXXXXXXXXXXXXXRRPAAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGK 120
                     XXXXXXXX    RRPAAGYAAAL+DASQ+TG+IHSVA+DVGRFSK+LR K
Sbjct: 61  PLPFSSSFSSXXXXXXXXPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTK 120

Query: 121 RIGGFLNNPLVGEEEKGRLVREIAVKGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIY 180
           RIGGFLN+P VGEEEKGRLVREIA KGGFE+QVV+LTKML+EK R+GIL EVLSEFERIY
Sbjct: 121 RIGGFLNDPFVGEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIY 180

Query: 181 DELCGTEVVMVSSSKKMEEEELFGIAENVQRLTGAVKVK 214
           DELCGTEVV+VSS++KM+EEEL+GIA+NVQRL+GA+KVK
Sbjct: 181 DELCGTEVVLVSSNRKMQEEELYGIAKNVQRLSGAMKVK 218

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BLAST of Cla97C05G080690 vs. NCBI nr
Match: XP_022934549.1 (ATP synthase delta chain, chloroplastic-like [Cucurbita moschata] >XP_022934555.1 ATP synthase delta chain, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 293.9 bits (751), Expect = 5.9e-76
Identity = 170/219 (77.63%), Postives = 190/219 (86.76%), Query Frame = 0


Query: 1   MDTLTTTSVSTLRVPSALTSSRDLLHLKNPTAHLPHRSPSLSSNSISKPPSFLSPHKT-- 60
           MDTL T+SVSTLRVPS L SSRDLLHLKN +AHLPHRSPS  SNSISKPP+FLS HKT  
Sbjct: 1   MDTL-TSSVSTLRVPSTLASSRDLLHLKNYSAHLPHRSPSRRSNSISKPPNFLSTHKTLN 60

Query: 61  ----XXXXXXXXXXXXXXXXXXRRPAAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGK 120
                     XXXXXXXX    RRPAAGYAAAL+DASQ+TG+IHSVA+DVGRFSK+LR K
Sbjct: 61  PLPFSSSFSSXXXXXXXXPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTK 120

Query: 121 RIGGFLNNPLVGEEEKGRLVREIAVKGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIY 180
           RIGGFLN+P V EEEKGRLVREIA KGGFE+QVV+LTKML+EK R+GIL EVLSEFERIY
Sbjct: 121 RIGGFLNDPFVVEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIY 180

Query: 181 DELCGTEVVMVSSSKKMEEEELFGIAENVQRLTGAVKVK 214
           DELCGTEVV+VSS++KM+EEELFGIA+NVQRL+GA+KVK
Sbjct: 181 DELCGTEVVLVSSNRKMQEEELFGIAKNVQRLSGAMKVK 218

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BLAST of Cla97C05G080690 vs. NCBI nr
Match: XP_004134294.1 (PREDICTED: ATP synthase delta chain, chloroplastic-like [Cucumis sativus] >KGN56400.1 hypothetical protein Csa_3G119340 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 1.0e-75
Identity = 163/216 (75.46%), Postives = 181/216 (83.80%), Query Frame = 0


Query: 1   MDTLTTTSVST-LRVPS-ALTSSRDLLHLKNPTAHLPHRSPSLSSNSISKPPSFLS-PHK 60
           MDTLTT SVS+ LRVPS  LTSSRD LHLKNPTAHLPHRSPS +SNSISKPP+FLS P  
Sbjct: 1   MDTLTTPSVSSALRVPSRTLTSSRDFLHLKNPTAHLPHRSPSRTSNSISKPPNFLSTPQT 60

Query: 61  TXXXXXXXXXXXXXXXXXXRRPAAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGKRIG 120
                              RRPA+GYAAAL+DASQSTG IHSVA+DVGRFSKLLRGKRIG
Sbjct: 61  LNPSIPFSTPRRSSSPLLHRRPASGYAAALLDASQSTGTIHSVAKDVGRFSKLLRGKRIG 120

Query: 121 GFLNNPLVGEEEKGRLVREIAVKGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIYDEL 180
             LN+PLVG+EEKGRLV+EIAVKGGFERQVV+LTKML+EK+++ IL EV SEFER+YDEL
Sbjct: 121 RVLNDPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKSKLSILTEVFSEFERVYDEL 180

Query: 181 CGTEVVMVSSSKKMEEEELFGIAENVQRLTGAVKVK 214
           CGTEVVMVSSSKKMEEEEL GIA+NVQRL+GA+KVK
Sbjct: 181 CGTEVVMVSSSKKMEEEELIGIAKNVQRLSGAIKVK 216

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BLAST of Cla97C05G080690 vs. TrEMBL
Match: tr|A0A0A0L326|A0A0A0L326_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119340 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.6e-76
Identity = 163/216 (75.46%), Postives = 181/216 (83.80%), Query Frame = 0


Query: 1   MDTLTTTSVST-LRVPS-ALTSSRDLLHLKNPTAHLPHRSPSLSSNSISKPPSFLS-PHK 60
           MDTLTT SVS+ LRVPS  LTSSRD LHLKNPTAHLPHRSPS +SNSISKPP+FLS P  
Sbjct: 1   MDTLTTPSVSSALRVPSRTLTSSRDFLHLKNPTAHLPHRSPSRTSNSISKPPNFLSTPQT 60

Query: 61  TXXXXXXXXXXXXXXXXXXRRPAAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGKRIG 120
                              RRPA+GYAAAL+DASQSTG IHSVA+DVGRFSKLLRGKRIG
Sbjct: 61  LNPSIPFSTPRRSSSPLLHRRPASGYAAALLDASQSTGTIHSVAKDVGRFSKLLRGKRIG 120

Query: 121 GFLNNPLVGEEEKGRLVREIAVKGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIYDEL 180
             LN+PLVG+EEKGRLV+EIAVKGGFERQVV+LTKML+EK+++ IL EV SEFER+YDEL
Sbjct: 121 RVLNDPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKSKLSILTEVFSEFERVYDEL 180

Query: 181 CGTEVVMVSSSKKMEEEELFGIAENVQRLTGAVKVK 214
           CGTEVVMVSSSKKMEEEEL GIA+NVQRL+GA+KVK
Sbjct: 181 CGTEVVMVSSSKKMEEEELIGIAKNVQRLSGAIKVK 216

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BLAST of Cla97C05G080690 vs. TrEMBL
Match: tr|A0A1S3AUM9|A0A1S3AUM9_CUCME (ATP synthase delta chain, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483162 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.3e-75
Identity = 164/216 (75.93%), Postives = 179/216 (82.87%), Query Frame = 0


Query: 1   MDTLTTTSV-STLRVPS-ALTSSRDLLHLKNPTAHLPHRSPSLSSNSISKPPSFLSPHKT 60
           MDTLTTTSV STLRVPS  L SSRD LHLKNPTAHLPHRSP  +SNSISKPP+FLS  KT
Sbjct: 1   MDTLTTTSVSSTLRVPSRTLASSRDFLHLKNPTAHLPHRSPPRTSNSISKPPNFLSTPKT 60

Query: 61  -XXXXXXXXXXXXXXXXXXRRPAAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGKRIG 120
                              RRPA+GYAAAL+DASQSTG IHSVA+DVGRFSKLLRGKRIG
Sbjct: 61  LNPSIPFSTPRRSSSPLLHRRPASGYAAALVDASQSTGTIHSVAKDVGRFSKLLRGKRIG 120

Query: 121 GFLNNPLVGEEEKGRLVREIAVKGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIYDEL 180
             LN+PLVG+EEKGRLV+EIAVKGGFERQVV+LTKML+EK  + IL EV SEF+RIYDEL
Sbjct: 121 RVLNDPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKCNLRILTEVFSEFDRIYDEL 180

Query: 181 CGTEVVMVSSSKKMEEEELFGIAENVQRLTGAVKVK 214
           CGTEVVMVSS+KKMEEEELFGIA+N QRL+GAVKVK
Sbjct: 181 CGTEVVMVSSNKKMEEEELFGIAKNAQRLSGAVKVK 216

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BLAST of Cla97C05G080690 vs. TrEMBL
Match: tr|A0A2P5CL73|A0A2P5CL73_9ROSA (ATPase, OSCP/delta subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_280840 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 9.1e-41
Identity = 110/234 (47.01%), Postives = 151/234 (64.53%), Query Frame = 0


Query: 1   MDTLTTTSVSTLRVP-----SALTSSRDLLHLKN---PTAHLPHRSPS---LSSNSISKP 60
           MDTL ++SVSTL+VP     S  TSSR+L H K+    T + P+ +P      S + +KP
Sbjct: 1   MDTL-SSSVSTLKVPTLHSISTTTSSRELNHFKSYVTNTLYTPNLTPHTHLFFSTTTTKP 60

Query: 61  PSFLSPHKTXXXXXXXXXXXXXXXXXXRRPAAGYAAALIDASQSTGAIHSVARDVGRFSK 120
            + +S  K                   R PAAGYAAAL D +Q   ++ SV +DV R SK
Sbjct: 61  INSISSTKPTSFTNPIFPSPPPSPATHRSPAAGYAAALFDVAQLNNSVDSVGKDVERLSK 120

Query: 121 LLRGKRIGGFLNNPLVGEEEKGRLVREIAVKGGFERQVVRLTKMLVEKNRVGILKEVLSE 180
           LLR  R+   L++P +GEEEKGR+V+ +A KG F R +V L K+LV +N+VG+L +VL E
Sbjct: 121 LLRSNRVRVVLSDPFLGEEEKGRVVKGLAEKGRFNRHLVCLVKLLVGRNKVGVLSQVLDE 180

Query: 181 FERIYDELCGTEVVMVSSSKKMEEEELFGIAENVQRLTGAVKVKGFSVLFESEN 224
           FER+YDE+ GT+VV++SS KKMEEE L GIA+ VQ+LTGAVKVK  +++ + +N
Sbjct: 181 FERVYDEVLGTQVVLISSIKKMEEEMLHGIAQRVQKLTGAVKVKVRNLVGDEQN 233

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BLAST of Cla97C05G080690 vs. TrEMBL
Match: tr|A0A2N9IWM3|A0A2N9IWM3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57678 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.5e-38
Identity = 105/232 (45.26%), Postives = 153/232 (65.95%), Query Frame = 0


Query: 1   MDTLTTTSVSTLRVPSALTSSRDLLHLKN--PTAHLPHRSPSLS-----SNSISKPPSFL 60
           MD+L ++SVSTL+VP+  ++SR+L H K    T+HLP   P+LS     +N +S   +  
Sbjct: 1   MDSL-SSSVSTLKVPALYSTSRELYHFKTTPQTSHLP---PNLSASTTKTNPLSNKATTH 60

Query: 61  SPHKT----XXXXXXXXXXXXXXXXXXRRPAAGYAAALIDASQSTGAIHSVARDVGRFSK 120
             HKT                       +P++GYAAALID +Q   ++++V +DV RF K
Sbjct: 61  LTHKTFTPSFFSHSQASSFTPFSPPLHLKPSSGYAAALIDIAQCNNSLNTVGKDVQRFLK 120

Query: 121 LLRGKRIGGFLNNPLVGEEEKGRLVREIAVKGGFERQVVRLTKMLVEKNRVGILKEVLSE 180
           LLR K+I   L + L+ E++KG+++ E+  K  F R +V L KML+EKN+VGI+KEVL E
Sbjct: 121 LLRNKQIQAVLVDQLISEKDKGQVIGEVVKKWRFNRHLVSLVKMLIEKNKVGIVKEVLEE 180

Query: 181 FERIYDELCGTEVVMVSSSKKMEEEELFGIAENVQRLTGAVKVKGFSVLFES 222
           FERIYDEL GT+VV+VSS+ KM E+E+ GIA+ VQ+L+GA+KVK  ++++ES
Sbjct: 181 FERIYDELSGTQVVLVSSATKMGEDEMVGIAKRVQKLSGAMKVKVRNLVYES 228

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BLAST of Cla97C05G080690 vs. TrEMBL
Match: tr|A0A2P4K642|A0A2P4K642_QUESU (Atp synthase delta chain, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_53768 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.6e-37
Identity = 100/229 (43.67%), Postives = 150/229 (65.50%), Query Frame = 0


Query: 1   MDTLTTTSVSTLRVPSALTSSRDLLHLKN--PTAHLPHRSPS--LSSNSISKPPSFLSPH 60
           MDTL ++SVSTL+VP+   +SR+L   K+   T    H SP   LSS + +   +    H
Sbjct: 1   MDTL-SSSVSTLKVPTPYPTSRELCFFKSTPQTPQYSHLSPQTHLSSTTKTTNKTITLTH 60

Query: 61  KT----XXXXXXXXXXXXXXXXXXRRPAAGYAAALIDASQSTGAIHSVARDVGRFSKLLR 120
           KT                      R PA+GYAAAL+D +Q   +++++ +DV RF K+LR
Sbjct: 61  KTFTPSFLSHSQPSSFTPNSPTLYREPASGYAAALVDIAQCNNSLNTLGKDVQRFLKILR 120

Query: 121 GKRIGGFLNNPLVGEEEKGRLVREIAVKGGFERQVVRLTKMLVEKNRVGILKEVLSEFER 180
            +++  FL++  + E++KG+++ E+  KG F R +V L KML++KN+VGI+KEVL EFER
Sbjct: 121 NEQVQEFLDDQFMSEKDKGQVIGEVVKKGRFNRHLVSLIKMLIQKNKVGIVKEVLEEFER 180

Query: 181 IYDELCGTEVVMVSSSKKMEEEELFGIAENVQRLTGAVKVKGFSVLFES 222
           I+DEL GT+VV+VSS+ KMEE++LFGIA+ VQ+L+GA KVK  +++ +S
Sbjct: 181 IHDELSGTQVVLVSSATKMEEDQLFGIAKRVQKLSGATKVKVRNLVHDS 228

[Close]

BLAST of Cla97C05G080690 vs. Swiss-Prot
Match: sp|P32980|ATPD_TOBAC (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPD PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.7e-19
Identity = 52/142 (36.62%), Postives = 83/142 (58.45%), Query Frame = 0


Query: 80  AAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGKRIGGFLNNPLVGEEEKGRLVREIAV 139
           A  YA AL D ++S G +     D+ +  K+   + +  F  +P+VGEE+K  LV EI  
Sbjct: 66  AGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDEIVS 125

Query: 140 KGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIYDELCGTEVVMVSSSKKMEEEELFGI 199
               +  V     +LV+  RV ++KE++ EFE++Y+ L  TE+ +V+S  K+E + L  I
Sbjct: 126 SSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQHLAQI 185

Query: 200 AENVQRLTGAVKVKGFSVLFES 222
           A+ VQRLTG+  V+  +V+ ES
Sbjct: 186 AKGVQRLTGSKNVRIKTVIDES 207

[Close]

BLAST of Cla97C05G080690 vs. Swiss-Prot
Match: sp|Q02758|ATPD_PEA (ATP synthase delta chain, chloroplastic OS=Pisum sativum OX=3888 GN=ATPD PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.7e-16
Identity = 44/139 (31.65%), Postives = 80/139 (57.55%), Query Frame = 0


Query: 80  AAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGKRIGGFLNNPLVGEEEKGRLVREIAV 139
           A  YAAAL D + S   + ++  D  +  +L    ++  + ++P+V +  K +L+ E A 
Sbjct: 69  AGSYAAALADLANSNNTLDAITADFDKIEQLFSDPKVFDYFSSPIVEDSTKRQLIGEFAT 128

Query: 140 KGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIYDELCGTEVVMVSSSKKMEEEELFGI 199
             GF+        +L++  R+ ++ +++ EFE +Y+ L  TE+V+V+S  K+E   L  I
Sbjct: 129 TSGFQPHTHNFLNVLIDSKRIDMIIDIIKEFEFVYNTLTDTELVVVTSVVKLESHHLAQI 188

Query: 200 AENVQRLTGAVKVKGFSVL 219
           A+ VQ+LTGA KV+  ++L
Sbjct: 189 AKQVQKLTGAKKVRTKTLL 207

[Close]

BLAST of Cla97C05G080690 vs. Swiss-Prot
Match: sp|Q07300|ATPD_SORBI (ATP synthase delta chain, chloroplastic OS=Sorghum bicolor OX=4558 GN=ATPD PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.1e-16
Identity = 47/134 (35.07%), Postives = 76/134 (56.72%), Query Frame = 0


Query: 80  AAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGKRIGGFLNNPLVGEEEKGRLVREIAV 139
           A  YA+AL + +   G +     D+ +  K+   + +  F +NP V  EEK  L+ EIA 
Sbjct: 65  ADSYASALSEVAVENGTLEQTVSDLEKLQKIFADETVAEFFDNPTVPREEKTALIDEIAK 124

Query: 140 KGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIYDELCGTEVVMVSSSKKMEEEELFGI 199
               +  VV    ++V+  R  IL E++ EFE I++ L GTEV  V+S  ++E ++L  I
Sbjct: 125 SYELQPHVVNFINVVVDNFRATILPEIVVEFENIFNSLTGTEVATVTSVVQLESQDLAQI 184

Query: 200 AENVQRLTGAVKVK 214
           A++VQ++TGA  V+
Sbjct: 185 AQHVQKMTGAKNVR 198

[Close]

BLAST of Cla97C05G080690 vs. Swiss-Prot
Match: sp|P11402|ATPD_SPIOL (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPD PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 6.1e-16
Identity = 42/134 (31.34%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 80  AAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGKRIGGFLNNPLVGEEEKGRLVREIAV 139
           A+ YA+AL D +  TG + +   DV +  ++   + +  F  NP++  + K  ++ EI  
Sbjct: 75  ASRYASALADVADVTGTLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSVLDEIIT 134

Query: 140 KGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIYDELCGTEVVMVSSSKKMEEEELFGI 199
             G +        +L++  R+ ++KE+L+EFE +++++ GTEV +V+S  K+E + L  I
Sbjct: 135 TSGLQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQI 194

Query: 200 AENVQRLTGAVKVK 214
           A+ VQ++TGA  V+
Sbjct: 195 AKGVQKITGAKNVR 208

[Close]

BLAST of Cla97C05G080690 vs. Swiss-Prot
Match: sp|Q42687|ATPD_CHLRE (ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=ATPD PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.7e-14
Identity = 40/132 (30.30%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 83  YAAALIDASQSTGAIHSVARDVGRFSKLLR-GKRIGGFLNNPLVGEEEKGRLVREIAVKG 142
           YA AL++ +   G + +V  DV   + L++   ++   + NP+V  ++K  ++ +IA + 
Sbjct: 42  YAKALVELADEKGKLEAVHADVDAVAGLMKENAKLSALIMNPVVESDKKRAVLAKIAKEA 101

Query: 143 GFERQVVRLTKMLVEKNRVGILKEVLSEFERIYDELCGTEVVMVSSSKKMEEEELFGIAE 202
           GF++  +    +LVEK+R+ ++ E+   FE +Y ++  T+V  + S+ K+E+E+ F IA+
Sbjct: 102 GFQQYTINWLNLLVEKDRLSLVPEICECFEDLYCQMTDTQVATLRSAVKLEQEQQFLIAK 161

Query: 203 NVQRLTGAVKVK 214
            +Q LTG+  +K
Sbjct: 162 KLQELTGSKNIK 173

[Close]

BLAST of Cla97C05G080690 vs. TAIR10
Match: AT4G09650.1 (ATP synthase delta-subunit gene)

HSP 1 Score: 75.5 bits (184), Expect = 6.0e-14
Identity = 40/139 (28.78%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 80  AAGYAAALIDASQSTGAIHSVARDVGRFSKLLRGKRIGGFLNNPLVGEEEKGRLVREIAV 139
           A+ YA AL D ++    +     D+ +  ++    ++  F  NP +  E+K +++ +I  
Sbjct: 52  ASSYAMALADVAKRNDTMELTVTDIEKLEQVFSDPQVLNFFANPTITVEKKRQVIDDIVK 111

Query: 140 KGGFERQVVRLTKMLVEKNRVGILKEVLSEFERIYDELCGTEVVMVSSSKKMEEEELFGI 199
               +        +LV+ NR+ I+ E++ EFE +Y++L  T++  V S  K+E  +L  I
Sbjct: 112 SSSLQSHTSNFLNVLVDANRINIVTEIVKEFELVYNKLTDTQLAEVRSVVKLEAPQLAQI 171

Query: 200 AENVQRLTGAVKVKGFSVL 219
           A+ VQ+LTGA  V+  +V+
Sbjct: 172 AKQVQKLTGAKNVRVKTVI 190

[Close]

BLAST of Cla97C05G080690 vs. TAIR10
Match: AT3G61860.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 233 MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSG 269
           MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSG 36

[Close]

BLAST of Cla97C05G080690 vs. TAIR10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 62.4 bits (150), Expect = 5.2e-10
Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 233 MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGIS 271
           M+P+F GNF YD R+S+LERLF KYG+VER+DMK+G +
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFA 38

[Close]

BLAST of Cla97C05G080690 vs. TAIR10
Match: AT2G46610.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-10
Identity = 26/36 (72.22%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 233 MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSG 269
           MR ++VGNF YDTR S+LERLF+K+GRV+R+DMKSG
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSG 36

[Close]

BLAST of Cla97C05G080690 vs. TAIR10
Match: AT4G25500.1 (arginine/serine-rich splicing factor 35)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 24/38 (63.16%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 233 MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGIS 271
           M+P+F GNF YD R+ +LERLF KYG+VER+DMK+G +
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFA 38

The following BLAST results are available for this feature:

BLAST of Cla97C05G080690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975394.1	1.1e-77	76.17	ATP synthase delta chain, chloroplastic-like [Cucurbita maxima]	[more]
XP_022974855.1	4.1e-77	78.08	ATP synthase delta chain, chloroplastic-like [Cucurbita maxima] >XP_022974856.1 ...	[more]
XP_023540771.1	1.5e-76	77.17	ATP synthase delta chain, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022934549.1	5.9e-76	77.63	ATP synthase delta chain, chloroplastic-like [Cucurbita moschata] >XP_022934555....	[more]
XP_004134294.1	1.0e-75	75.46	PREDICTED: ATP synthase delta chain, chloroplastic-like [Cucumis sativus] >KGN56...	[more]

BLAST of Cla97C05G080690 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L326\|A0A0A0L326_CUCSA	6.6e-76	75.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119340 PE=4 SV=1	[more]
tr\|A0A1S3AUM9\|A0A1S3AUM9_CUCME	4.3e-75	75.93	ATP synthase delta chain, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483162 ...	[more]
tr\|A0A2P5CL73\|A0A2P5CL73_9ROSA	9.1e-41	47.01	ATPase, OSCP/delta subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_280840 PE=...	[more]
tr\|A0A2N9IWM3\|A0A2N9IWM3_FAGSY	2.5e-38	45.26	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57678 PE=4 SV=1	[more]
tr\|A0A2P4K642\|A0A2P4K642_QUESU	1.6e-37	43.67	Atp synthase delta chain, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_53768...	[more]

BLAST of Cla97C05G080690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P32980\|ATPD_TOBAC	7.7e-19	36.62	ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPD PE=...	[more]
sp\|Q02758\|ATPD_PEA	4.7e-16	31.65	ATP synthase delta chain, chloroplastic OS=Pisum sativum OX=3888 GN=ATPD PE=1 SV...	[more]
sp\|Q07300\|ATPD_SORBI	6.1e-16	35.07	ATP synthase delta chain, chloroplastic OS=Sorghum bicolor OX=4558 GN=ATPD PE=2 ...	[more]
sp\|P11402\|ATPD_SPIOL	6.1e-16	31.34	ATP synthase delta chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPD PE=...	[more]
sp\|Q42687\|ATPD_CHLRE	9.7e-14	30.30	ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=...	[more]

BLAST of Cla97C05G080690 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09650.1	6.0e-14	28.78	ATP synthase delta-subunit gene	[more]
AT3G61860.1	1.6e-11	80.56	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.2	5.2e-10	65.79	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G46610.1	6.8e-10	72.22	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G25500.1	1.5e-09	63.16	arginine/serine-rich splicing factor 35	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0046933	proton-transporting ATP synthase activity, rotational mechanism

Vocabulary: **Biological Process**
Term	Definition
GO:0015986	ATP synthesis coupled proton transport

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR026015	ATP_synth_OSCP/delta_N_sf
IPR000711	ATPase_OSCP/dsu

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0018149	peptide cross-linking
biological_process	GO:0008150	biological_process
cellular_component	GO:0045259	proton-transporting ATP synthase complex
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G080690.1	Cla97C05G080690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000711	ATPase, OSCP/delta subunit	PRINTS	PR00125	ATPASEDELTA	coord: 148..159 score: 27.08 coord: 159..173 score: 26.0 coord: 79..98 score: 28.88
IPR000711	ATPase, OSCP/delta subunit	PFAM	PF00213	OSCP	coord: 82..213 e-value: 1.3E-19 score: 70.9
IPR000711	ATPase, OSCP/delta subunit	PANTHER	PTHR11910	ATP SYNTHASE DELTA CHAIN	coord: 1..214
IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily	GENE3D	G3DSA:1.10.520.20		coord: 80..172 e-value: 8.2E-12 score: 47.7
IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily	SUPERFAMILY	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase	coord: 81..177
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 222..274 e-value: 6.7E-6 score: 28.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 236..268 e-value: 5.3E-7 score: 29.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..74
None	No IPR available	PANTHER	PTHR11910:SF8	ATPASE, F1 COMPLEX, OSCP/DELTA SUBUNIT PROTEIN	coord: 1..214
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 232..267

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G080690	Cla021131	Watermelon (97103) v1	wmwmbB206
Cla97C05G080690	Csa3G119340	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G080690	MELO3C006001	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G080690	ClCG05G000620	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G080690	CSPI03G07720	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G080690	Cucsa.259470	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G080690	CmaCh06G009800	Cucurbita maxima (Rimu)	cmawmbB862
Cla97C05G080690	CmaCh00G005880	Cucurbita maxima (Rimu)	cmawmbB012
Cla97C05G080690	CmoCh06G010240	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G080690	Lsi05G021500	Bottle gourd (USVL1VR-Ls)	lsiwmbB333
Cla97C05G080690	CsGy3G007850	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G080690	MELO3C006001.2	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G080690	Bhi01G000379	Wax gourd	wgowmbB191

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G080690	Watermelon (97103) v2	wmbwmbB016
Cla97C05G080690	Silver-seed gourd	carwmbB0130
Cla97C05G080690	Silver-seed gourd	carwmbB1047
Cla97C05G080690	Cucumber (Gy14) v1	cgywmbB381
Cla97C05G080690	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G080690	Cucurbita maxima (Rimu)	cmawmbB859
Cla97C05G080690	Cucurbita moschata (Rifu)	cmowmbB243
Cla97C05G080690	Cucurbita moschata (Rifu)	cmowmbB625
Cla97C05G080690	Wild cucumber (PI 183967)	cpiwmbB399
Cla97C05G080690	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G080690	Cucumber (Chinese Long) v3	cucwmbB395
Cla97C05G080690	Cucumber (Chinese Long) v2	cuwmbB381
Cla97C05G080690	Melon (DHL92) v3.6.1	medwmbB024
Cla97C05G080690	Melon (DHL92) v3.5.1	mewmbB027
Cla97C05G080690	Watermelon (Charleston Gray)	wcgwmbB105
Cla97C05G080690	Watermelon (97103) v1	wmwmbB262
Cla97C05G080690	Wax gourd	wgowmbB082