Cla97C03G055700 (gene) Watermelon (97103) v2

NameCla97C03G055700
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr03 : 4654991 .. 4656475 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCCATTGACTCGAAAGCCTTCTTCTTCTCCTCCTTCTTCTTCACCCAATAAGCCCACCCTTCACCCTCTTGACCCCAAGGTTGTTAGGTGGTCGGCGTCGGTTACCGGTGGTGATTCCGATGGCAGAGAGAACCAGAATGGGATCAACAATGACAATGAGTTTGAGGCGGGTGAGTCGCCGGCGCAAGGAGATGAGGAAAATCAGCAGCAGCTTGTAATTAGTACTAAAACGCCAGAACACAAGACTGATAGCTGGGCTAGATCCAAACTCCGCAGCTTCAACTTTTCTTGTAAGTCTTCTGTTTTCTTTTTCTTTTTCTTTTCTTTTCCTATAATTTTTTCTGTTAACATTTTTCTTTTTTCTTTCTTTTTTTTTTCTTTTGGACACACTAAGCATAAATACTTAAATCTATATTGAATATATTAACCTTAGGATCATTCATGTCAAATTATCTAGAATAAATAAGATACCGAATTCCATTGAGAGATTGATGATAGTTACAAAATGACTATTATCTTCTTCAACCAAAATTTTGTATGTCTTTAGTAGGATCTCCGTTTACATGAGATTAGAAAGATTGGGTGTGTATTGTTTTAATATATAAGTGACCATAGACTCTCTTTATATACTAGTTTAATTAGGATTCCATTATACACTAATTAACTATGAATGAGCTTCTATCCATTCAGTTCATACTCAATTGGGAAACTAAGATCTTAATTAAATCACATAATAGAGTTCAATCTAATAAAATAACCAATGTGATAAAATACTAATTCACATACATAGCCCATACTTTAATTATATCTAATTGCTTAGCAAATTTGTTTCAATAATTCAGGTGGATCGAGAAAAATATATTTGACCAAACCAACAAATTGTGTCATGAAAACATATATTTTTGTGTTTTTAAATTGAAGAATCCCTTTAGCTCTTCAAATCTACAAATTTTACATTCTTACGATGAAAGTGAAATGGAGAAGAAAAAAATAAAGAATAAGGAGTAATCGACCCAAAAATTTACGTGGTATACTAATAGTGTGTTAGCTGTGTCTATCAATAGAAGAAGAGAGTAAAAAAAATATATCAAATAGACGTTAACAAGATTGGAGGGTTTTACATATAATACCCCACTAAACTTTGGCCCCAAAATCATATATAACATATTAGGCATATACACAACACACACATTACACACATTGGCAAGATTATTTGCCTATATTATTTTTATTGTCAGCGATAATCCTCAACTCATAGAAACTATAGCTCACTCCATCATAAAAGTAACCCACTTAGGACAACGATGATGCATTCCAAAAATTTACTTCACACGTTAACAAACTCTGTTGAAACTTTTGGTGCAACTCTTAAAAAGGTTAATTAAGAGTAGTTGTTTGCTGATTAGGGAGAAGAAGTAGAATGAACAGTAGTCGTTCACTTCGTGCTAAGATTCATCAAGCTGCATTAAAAGGGGACTAG

mRNA sequence

ATGATGCCATTGACTCGAAAGCCTTCTTCTTCTCCTCCTTCTTCTTCACCCAATAAGCCCACCCTTCACCCTCTTGACCCCAAGGTTGTTAGGTGGTCGGCGTCGGTTACCGGTGGTGATTCCGATGGCAGAGAGAACCAGAATGGGATCAACAATGACAATGAGTTTGAGGCGGGTGAGTCGCCGGCGCAAGGAGATGAGGAAAATCAGCAGCAGCTTGTAATTAGTACTAAAACGCCAGAACACAAGACTGATAGCTGGGCTAGATCCAAACTCCGCAGCTTCAACTTTTCTTGGAGAAGAAGTAGAATGAACAGTAGTCGTTCACTTCGTGCTAAGATTCATCAAGCTGCATTAAAAGGGGACTAG

Coding sequence (CDS)

ATGATGCCATTGACTCGAAAGCCTTCTTCTTCTCCTCCTTCTTCTTCACCCAATAAGCCCACCCTTCACCCTCTTGACCCCAAGGTTGTTAGGTGGTCGGCGTCGGTTACCGGTGGTGATTCCGATGGCAGAGAGAACCAGAATGGGATCAACAATGACAATGAGTTTGAGGCGGGTGAGTCGCCGGCGCAAGGAGATGAGGAAAATCAGCAGCAGCTTGTAATTAGTACTAAAACGCCAGAACACAAGACTGATAGCTGGGCTAGATCCAAACTCCGCAGCTTCAACTTTTCTTGGAGAAGAAGTAGAATGAACAGTAGTCGTTCACTTCGTGCTAAGATTCATCAAGCTGCATTAAAAGGGGACTAG

Protein sequence

MMPLTRKPSSSPPSSSPNKPTLHPLDPKVVRWSASVTGGDSDGRENQNGINNDNEFEAGESPAQGDEENQQQLVISTKTPEHKTDSWARSKLRSFNFSWRRSRMNSSRSLRAKIHQAALKGD
BLAST of Cla97C03G055700 vs. NCBI nr
Match: KGN64497.1 (hypothetical protein Csa_1G059760 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 9.7e-28
Identity = 80/123 (65.04%), Postives = 92/123 (74.80%), Query Frame = 0

Query: 2   MPLTRKPSSSPPSSSPNKPTLHPLDPKVVRWSASVTGGDSDGRENQNGINNDNEFEAGES 61
           MPLT KP SS  SSSPNKPTL P DPK VRWS SVTGGDSD R+ Q+GI++D+EFE GE+
Sbjct: 1   MPLTHKPPSS--SSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGET 60

Query: 62  PAQGDEENQQQLVISTKTPE-HKTD-SWARSKLRSFNFSWRRSRMNSSRSLRAKIHQAAL 121
           P QGDEENQ QLVI ++TPE  K D SWARS            R++ +RSLRAK+HQAAL
Sbjct: 61  PEQGDEENQHQLVIGSRTPEPPKNDMSWARS-----------IRVDDNRSLRAKMHQAAL 110

Query: 122 KGD 123
           KGD
Sbjct: 121 KGD 110

BLAST of Cla97C03G055700 vs. NCBI nr
Match: XP_022137142.1 (ankyrin repeat-containing protein NPR4-like [Momordica charantia])

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14
Identity = 60/124 (48.39%), Postives = 78/124 (62.90%), Query Frame = 0

Query: 1   MMPLTRKPSSSPPSSSPNKPTLHPLDPKVVRWSASVTGGDSDGRENQNGINNDNEFEAGE 60
           MMPLTRKP SS  S+          DP+ VRWS +VT GD+D   +       ++ EA +
Sbjct: 1   MMPLTRKPLSSSQSN----------DPRAVRWSETVTDGDADDAGDGEDHRGIDDLEAAD 60

Query: 61  SPAQGDEENQQQLVISTKTPEH-KTD-SWARSKLRSFNFSWRRSRMNSSRSLRAKIHQAA 120
           SPAQGDE  QQ ++IST+T +  K D  WA+SK+ SF FSW  SR   +R LR +++QAA
Sbjct: 61  SPAQGDENQQQLVMISTRTSQSPKIDLRWAKSKIPSFRFSW--SRRIDNRPLRVRLYQAA 112

Query: 121 LKGD 123
           LKGD
Sbjct: 121 LKGD 112

BLAST of Cla97C03G055700 vs. NCBI nr
Match: XP_022994352.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita maxima])

HSP 1 Score: 80.1 bits (196), Expect = 5.7e-12
Identity = 62/128 (48.44%), Postives = 77/128 (60.16%), Query Frame = 0

Query: 1   MMPLTRKPSSSPPSSSPNKPTLHPLDPKVVRWSASVTGGDSDGRENQNGINN--DNEFEA 60
           M P TR+PS+S  SS+ + P  H  D K VRWS  VTG DS   ++ NG+NN  D +FE 
Sbjct: 1   MKPFTRRPSTS--SSTKSTPGRH--DGKAVRWSEPVTGVDSAAVKDHNGVNNDEDEDFEV 60

Query: 61  G--ESPAQGDEENQQQLVISTK--TPEHKTDSWARSKLRSFNFSWRRSRMNSSRSLRAKI 120
           G  ESPA+GDEEN   L I  K   P+ K  SW  SK  SF FS  +SR   +R LR ++
Sbjct: 61  GEDESPARGDEENPLPLEIYGKPLDPKTKDLSWPMSKFHSFRFS--KSRRMDNRPLRVQL 120

Query: 121 HQAALKGD 123
           +QAA  GD
Sbjct: 121 YQAAQNGD 122

BLAST of Cla97C03G055700 vs. TrEMBL
Match: tr|A0A0A0LUR7|A0A0A0LUR7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G059760 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.4e-28
Identity = 80/123 (65.04%), Postives = 92/123 (74.80%), Query Frame = 0

Query: 2   MPLTRKPSSSPPSSSPNKPTLHPLDPKVVRWSASVTGGDSDGRENQNGINNDNEFEAGES 61
           MPLT KP SS  SSSPNKPTL P DPK VRWS SVTGGDSD R+ Q+GI++D+EFE GE+
Sbjct: 1   MPLTHKPPSS--SSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGET 60

Query: 62  PAQGDEENQQQLVISTKTPE-HKTD-SWARSKLRSFNFSWRRSRMNSSRSLRAKIHQAAL 121
           P QGDEENQ QLVI ++TPE  K D SWARS            R++ +RSLRAK+HQAAL
Sbjct: 61  PEQGDEENQHQLVIGSRTPEPPKNDMSWARS-----------IRVDDNRSLRAKMHQAAL 110

Query: 122 KGD 123
           KGD
Sbjct: 121 KGD 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN64497.19.7e-2865.04hypothetical protein Csa_1G059760 [Cucumis sativus][more]
XP_022137142.11.2e-1448.39ankyrin repeat-containing protein NPR4-like [Momordica charantia][more]
XP_022994352.15.7e-1248.44ankyrin repeat-containing protein ITN1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
tr|A0A0A0LUR7|A0A0A0LUR7_CUCSA6.4e-2865.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G059760 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G055700.1Cla97C03G055700.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..122

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C03G055700Cla019363Watermelon (97103) v1wmwmbB124
Cla97C03G055700ClCG03G004550Watermelon (Charleston Gray)wcgwmbB186
Cla97C03G055700CsGy1G010390Cucumber (Gy14) v2cgybwmbB032
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C03G055700Wax gourdwgowmbB473
Cla97C03G055700Watermelon (97103) v2wmbwmbB013
Cla97C03G055700Silver-seed gourdcarwmbB0517
Cla97C03G055700Silver-seed gourdcarwmbB0672
Cla97C03G055700Silver-seed gourdcarwmbB0976
Cla97C03G055700Silver-seed gourdcarwmbB1061
Cla97C03G055700Cucumber (Gy14) v2cgybwmbB426
Cla97C03G055700Cucumber (Gy14) v1cgywmbB023
Cla97C03G055700Cucumber (Gy14) v1cgywmbB092
Cla97C03G055700Cucurbita maxima (Rimu)cmawmbB228
Cla97C03G055700Cucurbita maxima (Rimu)cmawmbB417
Cla97C03G055700Cucurbita maxima (Rimu)cmawmbB683
Cla97C03G055700Cucurbita maxima (Rimu)cmawmbB888
Cla97C03G055700Cucurbita moschata (Rifu)cmowmbB212
Cla97C03G055700Cucurbita moschata (Rifu)cmowmbB394
Cla97C03G055700Cucurbita moschata (Rifu)cmowmbB656
Cla97C03G055700Cucurbita moschata (Rifu)cmowmbB858
Cla97C03G055700Wild cucumber (PI 183967)cpiwmbB032
Cla97C03G055700Wild cucumber (PI 183967)cpiwmbB041
Cla97C03G055700Wild cucumber (PI 183967)cpiwmbB473
Cla97C03G055700Cucumber (Chinese Long) v3cucwmbB030
Cla97C03G055700Cucumber (Chinese Long) v3cucwmbB040
Cla97C03G055700Cucumber (Chinese Long) v3cucwmbB467
Cla97C03G055700Cucumber (Chinese Long) v2cuwmbB032
Cla97C03G055700Cucumber (Chinese Long) v2cuwmbB449
Cla97C03G055700Bottle gourd (USVL1VR-Ls)lsiwmbB131
Cla97C03G055700Bottle gourd (USVL1VR-Ls)lsiwmbB176
Cla97C03G055700Melon (DHL92) v3.6.1medwmbB145
Cla97C03G055700Melon (DHL92) v3.6.1medwmbB524
Cla97C03G055700Melon (DHL92) v3.5.1mewmbB156
Cla97C03G055700Melon (DHL92) v3.5.1mewmbB158
Cla97C03G055700Melon (DHL92) v3.5.1mewmbB531
Cla97C03G055700Watermelon (Charleston Gray)wcgwmbB103
Cla97C03G055700Watermelon (97103) v1wmwmbB260