Cla97C02G026630 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G026630
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Transmembrane protein
Location	Cla97Chr02 : 386723 .. 387040 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACTGAGGAGGAAAAGGGAGAAGATAAGTTAAGTGGTGGTAGTAGTTCGAGTGGATTTTTGGGTAAATTGGAAGAAAAGTACAGAGAAATCAAAGAGAATGCAGAAACATATCCTTATGTATGGGGCTCATACATTGTTGTCTATGGCGGATTCGCTCTTTGGACTGGCTATAGATGGAGGAAGCTTCGGAAGACGGAGGACAGAGTACGCGTTTTACAGGAGAAGCTTCGACAGCGTTACGAAGCAGAACAATCCTCCGCCAAACAATCAGCAACTTCGGTTGATAAAAATGCACTTCCTTCCAAGCAGTAG

mRNA sequence

ATGGAAACTGAGGAGGAAAAGGGAGAAGATAAGTTAAGTGGTGGTAGTAGTTCGAGTGGATTTTTGGGTAAATTGGAAGAAAAGTACAGAGAAATCAAAGAGAATGCAGAAACATATCCTTATGTATGGGGCTCATACATTGTTGTCTATGGCGGATTCGCTCTTTGGACTGGCTATAGATGGAGGAAGCTTCGGAAGACGGAGGACAGAGTACGCGTTTTACAGGAGAAGCTTCGACAGCGTTACGAAGCAGAACAATCCTCCGCCAAACAATCAGCAACTTCGGTTGATAAAAATGCACTTCCTTCCAAGCAGTAG

Coding sequence (CDS)

ATGGAAACTGAGGAGGAAAAGGGAGAAGATAAGTTAAGTGGTGGTAGTAGTTCGAGTGGATTTTTGGGTAAATTGGAAGAAAAGTACAGAGAAATCAAAGAGAATGCAGAAACATATCCTTATGTATGGGGCTCATACATTGTTGTCTATGGCGGATTCGCTCTTTGGACTGGCTATAGATGGAGGAAGCTTCGGAAGACGGAGGACAGAGTACGCGTTTTACAGGAGAAGCTTCGACAGCGTTACGAAGCAGAACAATCCTCCGCCAAACAATCAGCAACTTCGGTTGATAAAAATGCACTTCCTTCCAAGCAGTAG

Protein sequence

METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNALPSKQ

Homology

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BLAST of Cla97C02G026630 vs. NCBI nr
Match: XP_004147347.1 (PREDICTED: uncharacterized protein LOC101213780 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-37
Identity = 82/105 (78.10%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 1   METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYR 60
           ++ EEE GEDKL+G +SSSGF GKLE KYREIKENAE YPYVWGSYIVVYGG  LW GYR
Sbjct: 2   VDVEEENGEDKLNGVASSSGFFGKLEHKYREIKENAEKYPYVWGSYIVVYGGIFLWAGYR 61

Query: 61  WRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNALPSKQ 106
           WRKLRKTEDRVR+LQEKLR+ YEA++SS KQSA SVDK + PSKQ
Sbjct: 62  WRKLRKTEDRVRILQEKLRKHYEAQESSIKQSANSVDKTSTPSKQ 106

[Close]

BLAST of Cla97C02G026630 vs. NCBI nr
Match: XP_008460875.1 (PREDICTED: uncharacterized protein LOC103499620 [Cucumis melo] >XP_008460876.1 PREDICTED: uncharacterized protein LOC103499620 [Cucumis melo] >XP_008460877.1 PREDICTED: uncharacterized protein LOC103499620 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-37
Identity = 84/105 (80.00%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYR 60
           ++ EEEKG DKL+G SSSS F GKL  KYREIKENAE YPYVWGSYI+VYGG  LW GYR
Sbjct: 2   VDIEEEKGGDKLNGVSSSSSFSGKLVHKYREIKENAEKYPYVWGSYIIVYGGMFLWAGYR 61

Query: 61  WRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNALPSKQ 106
           WRKLRKTEDRVR+LQEKLRQ YEAEQSS KQSA SVDKN+ PSKQ
Sbjct: 62  WRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ 106

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BLAST of Cla97C02G026630 vs. NCBI nr
Match: XP_023007268.1 (uncharacterized protein LOC111499806 [Cucurbita maxima])

HSP 1 Score: 156.0 bits (393), Expect = 7.1e-35
Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 5  EEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKL 64
          ++K ED L+  +SSSGFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKL
Sbjct: 4  QKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRWRKL 63

Query: 65 RKTEDRVRVLQEKLRQRYEAEQSSAKQSATSV 97
          RKTEDRVRVLQEKLRQRYEAEQ SAKQSA SV
Sbjct: 64 RKTEDRVRVLQEKLRQRYEAEQ-SAKQSANSV 94

[Close]

BLAST of Cla97C02G026630 vs. NCBI nr
Match: XP_022948157.1 (uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948158.1 uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948159.1 uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_023534704.1 uncharacterized protein LOC111796195 [Cucurbita pepo subsp. pepo] >XP_023534706.1 uncharacterized protein LOC111796195 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 155.6 bits (392), Expect = 9.2e-35
Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYR 60
          MET ++K ED L+  +SSSGFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYR
Sbjct: 1  MET-QKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYR 60

Query: 61 WRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSV 97
          WRKLRKTEDRVR LQEKLRQRYEAEQ SAKQSA SV
Sbjct: 61 WRKLRKTEDRVRALQEKLRQRYEAEQ-SAKQSANSV 94

[Close]

BLAST of Cla97C02G026630 vs. NCBI nr
Match: XP_022148881.1 (uncharacterized protein LOC111017444 [Momordica charantia])

HSP 1 Score: 146.7 bits (369), Expect = 4.3e-32
Identity = 78/105 (74.29%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 1   METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYR 60
           MET  +K ED+++  ++SSGF+GKLE+KYREIKENAETYPYVWGSYIVVYGGFALWTGYR
Sbjct: 1   MET-PKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYR 60

Query: 61  WRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNALPSKQ 106
           WRKLRKTEDRVR LQEKLR+RYEAEQS++  S  SV+K+    KQ
Sbjct: 61  WRKLRKTEDRVRXLQEKLRRRYEAEQSAS--SVASVEKDPPSVKQ 102

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BLAST of Cla97C02G026630 vs. TrEMBL
Match: tr|A0A1S3CCY7|A0A1S3CCY7_CUCME (uncharacterized protein LOC103499620 OS=Cucumis melo OX=3656 GN=LOC103499620 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-37
Identity = 84/105 (80.00%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYR 60
           ++ EEEKG DKL+G SSSS F GKL  KYREIKENAE YPYVWGSYI+VYGG  LW GYR
Sbjct: 2   VDIEEEKGGDKLNGVSSSSSFSGKLVHKYREIKENAEKYPYVWGSYIIVYGGMFLWAGYR 61

Query: 61  WRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNALPSKQ 106
           WRKLRKTEDRVR+LQEKLRQ YEAEQSS KQSA SVDKN+ PSKQ
Sbjct: 62  WRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ 106

[Close]

BLAST of Cla97C02G026630 vs. TrEMBL
Match: tr|A0A2P4ME50|A0A2P4ME50_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_35264 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.9e-24
Identity = 61/98 (62.24%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 1  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYR 60
          M TE++  +D+    +++ G  G +EE+YR+IKENAETYPYVWGSYIVVYGGFALW  YR
Sbjct: 1  MATEQKGEDDQQVTSTTAVGLRGMVEEQYRKIKENAETYPYVWGSYIVVYGGFALWGAYR 60

Query: 61 WRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDK 99
          WRKLR+TEDRVRVLQE+LR+  E E+S++  +A SV+K
Sbjct: 61 WRKLRRTEDRVRVLQERLRKLVETEESAS--TAKSVEK 96

[Close]

BLAST of Cla97C02G026630 vs. TrEMBL
Match: tr|A0A1S3E5T5|A0A1S3E5T5_CICAR (uncharacterized protein LOC101509617 OS=Cicer arietinum OX=3827 GN=LOC101509617 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.3e-24
Identity = 61/101 (60.40%), Postives = 79/101 (78.22%), Query Frame = 0


Query: 5   EEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKL 64
           ++ GED++  G S++GF+  LE +Y++IKE+AETYPYVW SYIVVYGGF LWT YRWRKL
Sbjct: 19  QKTGEDQVVSGPSAAGFIDSLENRYQKIKEHAETYPYVWASYIVVYGGFGLWTTYRWRKL 78

Query: 65  RKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNALPSKQ 106
           RKTE+RVR LQEKLR+  EAE+S    SA  V+K +  S++
Sbjct: 79  RKTENRVRSLQEKLRKLIEAEESG--NSAKVVEKGSASSEK 117

[Close]

BLAST of Cla97C02G026630 vs. TrEMBL
Match: tr|M5X726|M5X726_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa019061mg PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-23
Identity = 58/87 (66.67%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 5  EEKGEDK--LSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWR 64
          EE+GE+K   +   +++G  G + EKYR+IKE+AETYPYVWGSYIVVYGG ALWT YRWR
Sbjct: 4  EEQGEEKQQTTSTQAAAGLGGAVVEKYRQIKEHAETYPYVWGSYIVVYGGLALWTAYRWR 63

Query: 65 KLRKTEDRVRVLQEKLRQRYEAEQSSA 90
          KLRKTEDRVR LQ++LR+ Y AE++SA
Sbjct: 64 KLRKTEDRVRALQDRLRKHYAAEEASA 90

[Close]

BLAST of Cla97C02G026630 vs. TrEMBL
Match: tr|A0A251Q4T5|A0A251Q4T5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G241300 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-23
Identity = 58/87 (66.67%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 5  EEKGEDK--LSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWR 64
          EE+GE+K   +   +++G  G + EKYR+IKE+AETYPYVWGSYIVVYGG ALWT YRWR
Sbjct: 4  EEQGEEKQQTTSTQAAAGLGGAVVEKYRQIKEHAETYPYVWGSYIVVYGGLALWTAYRWR 63

Query: 65 KLRKTEDRVRVLQEKLRQRYEAEQSSA 90
          KLRKTEDRVR LQ++LR+ Y AE++SA
Sbjct: 64 KLRKTEDRVRALQDRLRKHYAAEEASA 90

[Close]

BLAST of Cla97C02G026630 vs. TAIR10
Match: AT5G09270.1 (unknown protein)

HSP 1 Score: 107.8 bits (268), Expect = 4.0e-24
Identity = 61/109 (55.96%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 1   METEEEKGEDKLSGGSS-SSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGY 60
           M TE    ED+ S  S  + GF+G +EE+Y++++++AE YPYVWGSY VVYGG  LWT Y
Sbjct: 1   MATEHSGLEDQESQPSQVAPGFVGAIEEQYKKLRDHAEAYPYVWGSYTVVYGGLFLWTAY 60

Query: 61  RWRKLRKTEDRVRVLQEKLRQRYEAEQS--SAKQSATSVDK-NALPSKQ 106
           RWRKLR+TEDRVR LQ KLR+  E EQ+  +A +SA SVDK +++P K+
Sbjct: 61  RWRKLRRTEDRVRGLQTKLRKLVENEQAAVTASKSAQSVDKSSSIPDKK 109

The following BLAST results are available for this feature:

BLAST of Cla97C02G026630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147347.1	1.5e-37	78.10	PREDICTED: uncharacterized protein LOC101213780 [Cucumis sativus]	[more]
XP_008460875.1	1.5e-37	80.00	PREDICTED: uncharacterized protein LOC103499620 [Cucumis melo] >XP_008460876.1 P...	[more]
XP_023007268.1	7.1e-35	86.96	uncharacterized protein LOC111499806 [Cucurbita maxima]	[more]
XP_022948157.1	9.2e-35	85.42	uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948158.1 unchar...	[more]
XP_022148881.1	4.3e-32	74.29	uncharacterized protein LOC111017444 [Momordica charantia]	[more]

BLAST of Cla97C02G026630 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CCY7\|A0A1S3CCY7_CUCME	1.0e-37	80.00	uncharacterized protein LOC103499620 OS=Cucumis melo OX=3656 GN=LOC103499620 PE=...	[more]
tr\|A0A2P4ME50\|A0A2P4ME50_QUESU	4.9e-24	62.24	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_35264 PE=4 SV=1	[more]
tr\|A0A1S3E5T5\|A0A1S3E5T5_CICAR	8.3e-24	60.40	uncharacterized protein LOC101509617 OS=Cicer arietinum OX=3827 GN=LOC101509617 ...	[more]
tr\|M5X726\|M5X726_PRUPE	1.8e-23	66.67	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa019061m...	[more]
tr\|A0A251Q4T5\|A0A251Q4T5_PRUPE	1.8e-23	66.67	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G241300 PE=4 SV=1	[more]

BLAST of Cla97C02G026630 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C02G026630 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G09270.1	4.0e-24	55.96	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009536	plastid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G026630.1	Cla97C02G026630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..105
None	No IPR available	PANTHER	PTHR36794	FAMILY NOT NAMED	coord: 6..98

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G026630	Cla007824	Watermelon (97103) v1	wmwmbB324
Cla97C02G026630	MELO3C023226	Melon (DHL92) v3.5.1	mewmbB093
Cla97C02G026630	ClCG02G000360	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G026630	CmaCh02G006450	Cucurbita maxima (Rimu)	cmawmbB632
Cla97C02G026630	CmoCh02G006480	Cucurbita moschata (Rifu)	cmowmbB605
Cla97C02G026630	Lsi10G007510	Bottle gourd (USVL1VR-Ls)	lsiwmbB053
Cla97C02G026630	MELO3C023226.2	Melon (DHL92) v3.6.1	medwmbB088
Cla97C02G026630	Carg11710	Silver-seed gourd	carwmbB1117
Cla97C02G026630	CsaV3_2G019480	Cucumber (Chinese Long) v3	cucwmbB124
Cla97C02G026630	Bhi10G001351	Wax gourd	wgowmbB372

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G026630	Silver-seed gourd	carwmbB0749
Cla97C02G026630	Cucumber (Gy14) v2	cgybwmbB115
Cla97C02G026630	Cucumber (Gy14) v1	cgywmbB403
Cla97C02G026630	Cucurbita maxima (Rimu)	cmawmbB569
Cla97C02G026630	Cucurbita moschata (Rifu)	cmowmbB546
Cla97C02G026630	Wild cucumber (PI 183967)	cpiwmbB125
Cla97C02G026630	Cucumber (Chinese Long) v2	cuwmbB122