Cla97C01G010590 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G010590
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	chloroplast stem-loop binding protein of 41 kDa b, chloroplastic
Location	Cla97Chr01 : 16141581 .. 16144525 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATCATGGCAAAGCCAATGGCTGCTCACCACCAAAAATTGCCTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGACTTCAATGGCGCCAGACTTCACACCCAAGTTCAGGTCCATTTCTCTTCTCTTATCCTTATGTATCTTTCTGTTCTGGGTTTTGTTCTTCACTTTTAAATTTTGATTCTAACCGGAAATTATTTGAGGTGTTTTTGTTGTTAAGGCCTCAAAATCAGTGGAAACTGAATTGGGTTTCCCCATAAATGGCCATTGTAATTTGCGAGTTTCTTTTCCCCTCTTATTTGATTGGATTCATATATGTAGGTTGCCACTAAACACAAAAGCTTAGAAGAAATAGGATACATCGAAGGTTAATTGGATTCACGAAACTCAATGAACATGAAAGCTGTTAATAAGAATTTGAGGGTGAATGAGGTTGGAAGTCCGCTTTGATACCATGTTAAACACAAAAGCATAAACGAGTTAGGATATGCTGTGCGATAACTTGAATATTAATTTAATGGACGAAACCGATTAACATGTGAGGCTAACACGAATGAGAGGGGAAATGAGGTTTCGAACATGAGTCTTTTTGCTCTGATACCGTGTTAAACTACATTACATTAGGAACTATAGGTTGATGGATTATGGTGCATTTAGTCCTTTATATGTTTTCTCAGTTGGGTTTGGCCTTGGATTGCAGTATAAAAGGAAGGTTATGCAGCCAAAAGGAGCATTACATGTTACAGCAAGTGCCAAGAAGAATATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTCCTTGTCAAAGAGGGTCATCAGGTTTTGCCATTCTCTTTCTTCTTTCTTTGCTTGCTACATATTCCCCATTAGAAGATTCATGGAACTTGCTAATTTTGGCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATACTGATTTTAAATCCAAGGTCTTCTAAGCTTCCATTTAAGCGTAAAATCTGGTGGCTTTGATTGAAAAGAAATGTGGTATCATGGTTTTATTTTTAAGCTTATTACTTGTGAGTTTTTTGGAGTACAGATGATAAATTTGTCTATTTGGTTCTCATTTCCCAGATTCTGCATTTGAAGGGAGACAGACAAGACTTTGATTTTGTGAAATCCAGTCTCTCGGCCGCAGGGTTTGATGTAGTTTATGACATAAATGGTGAGTATGATTTCGAATAGATCTCTTTTTGTTTGAAATTCTTTGCCCTGATTTGTTTTAACACCATCATATCTAATCATTTTTTCGGTCTACACACTGTTGCATGATTTCAGGGCGAGAAGCCGTTGAAGTAGAGCCAATTTTAGATGCTTTGCCTAAGCTAGAGCAGTAAGATTTCCTAAATAATATCTGCTTTCTTTTCACAGCAATTGGTGTTAGTCATTTGCATCATGTTTTCCAATGCTAGAGAAACAGTTTTAATGTACAAAAGCATTTTGGTCCTTTCAAAGTATACATTAAGCCATTGCCACTGGCAATACAGGATTGGTTTGTCGAGTTTTTGTGCTGATAGTAGTCAGATTGTTGGACTTCAATTCAGAAACATTGCCGATATTGTTAATTTTATAAAGATACAATATTAAGCTATCAAGTTAAATTTAGATGTTTCAAGGTCAAGAATTCAAATCATGAAACAGGTCATAGATTCTGCAGCGTCTGATAAATGTGATGTCTCTAATTATTCTCAGGTTTATATACTGCTCTTCAGCTGGTGTCTACCTCAAGTCTGATCTCCTACCTCACTTTGAGGTACCTTTTCTTTCCCTTGTAAAGAAAAGCTTTCAGTTTACCTTCATTGTCCATTACCAAATAAGTGGTTCACTCAAAGCTTGACCGCCCCTTCTCTTTCATATCGTAGGTAGATGCAGTTGATCCAAAGAGTAGACACAAGGGGAAGCTTGAGACGGAGAGCTTACTGGCATCGAAGGGTGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAACCCTGTGGAAGAATGGTTCTTCCACCGGTTGAAAGCGGGTCGCCCCATTCCAATCCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGTCAGTGCTGTTAAGTACTATTTTTGCAACAGGAACAAATCATTAAGTCTGTTGTAGGTGGCAGGTCCATAAAGATCCTAATTAGAAAGCATTCACTGCCTTAATGTGAATAGCTTAGGAAAAGGATTATAGGTTCAAACATTTCTTGACGTTAACAGAGCGATCTAGATCGAATAAATAATTGAACTTTCTTGACAATTGCAGGATTTGGCAAAGGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATCTCTGGTGAAAAAAATGTTACATTTGATGGTTTAGCCAAAGCTTGTGCTAAGGTACGCTCTTGAAGACATAATCAGGACATCAGGACACCATTGTATTCATCATTGAGATAACATCTGAATTGGCTGATTTCTCCTGTTATAAACTTCACAGGCTGGAGGCTTTCCCGAGCCCGAGATTGTCCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCGTTCCCTTTCCGTGATCAGGTAATCTGGTCAATGTAATGATAAGTATGATGCAGCTTATTGGATTCTGATTGCTGAAATAACACCTTGGTTGTTGATATAAATGTCATGCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGTGTGCTCGGGTGGAAGCCTGAATTCGATTTGGTGGAAGGTCTTGCAGACTCCTACAACTTGGACTTTGGCAGAGGCACTTTCAGGAAAGAGGCTGATTTCTCAACAGATGACATAATCCTTGGCAAGAGTTTGGTTCTTCAAGCTTGA

mRNA sequence

ATGGGCATCATGGCAAAGCCAATGGCTGCTCACCACCAAAAATTGCCTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGACTTCAATGGCGCCAGACTTCACACCCAAGTTCAGTATAAAAGGAAGGTTATGCAGCCAAAAGGAGCATTACATGTTACAGCAAGTGCCAAGAAGAATATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTCCTTGTCAAAGAGGGTCATCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATACTGATTTTAAATCCAAGATTCTGCATTTGAAGGGAGACAGACAAGACTTTGATTTTGTGAAATCCAGTCTCTCGGCCGCAGGGTTTGATGTAGTTTATGACATAAATGGGCGAGAAGCCGTTGAAGTAGAGCCAATTTTAGATGCTTTGCCTAAGCTAGAGCAGTTTATATACTGCTCTTCAGCTGGTGTCTACCTCAAGTCTGATCTCCTACCTCACTTTGAGGTAGATGCAGTTGATCCAAAGAGTAGACACAAGGGGAAGCTTGAGACGGAGAGCTTACTGGCATCGAAGGGTGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAACCCTGTGGAAGAATGGTTCTTCCACCGGTTGAAAGCGGGTCGCCCCATTCCAATCCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGATTTGGCAAAGGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATCTCTGGTGAAAAAAATGTTACATTTGATGGTTTAGCCAAAGCTTGTGCTAAGGCTGGAGGCTTTCCCGAGCCCGAGATTGTCCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCGTTCCCTTTCCGTGATCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGTGTGCTCGGGTGGAAGCCTGAATTCGATTTGGTGGAAGGTCTTGCAGACTCCTACAACTTGGACTTTGGCAGAGGCACTTTCAGGAAAGAGGCTGATTTCTCAACAGATGACATAATCCTTGGCAAGAGTTTGGTTCTTCAAGCTTGA

Coding sequence (CDS)

ATGGGCATCATGGCAAAGCCAATGGCTGCTCACCACCAAAAATTGCCTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGACTTCAATGGCGCCAGACTTCACACCCAAGTTCAGTATAAAAGGAAGGTTATGCAGCCAAAAGGAGCATTACATGTTACAGCAAGTGCCAAGAAGAATATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTCCTTGTCAAAGAGGGTCATCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATACTGATTTTAAATCCAAGATTCTGCATTTGAAGGGAGACAGACAAGACTTTGATTTTGTGAAATCCAGTCTCTCGGCCGCAGGGTTTGATGTAGTTTATGACATAAATGGGCGAGAAGCCGTTGAAGTAGAGCCAATTTTAGATGCTTTGCCTAAGCTAGAGCAGTTTATATACTGCTCTTCAGCTGGTGTCTACCTCAAGTCTGATCTCCTACCTCACTTTGAGGTAGATGCAGTTGATCCAAAGAGTAGACACAAGGGGAAGCTTGAGACGGAGAGCTTACTGGCATCGAAGGGTGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAACCCTGTGGAAGAATGGTTCTTCCACCGGTTGAAAGCGGGTCGCCCCATTCCAATCCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGATTTGGCAAAGGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATCTCTGGTGAAAAAAATGTTACATTTGATGGTTTAGCCAAAGCTTGTGCTAAGGCTGGAGGCTTTCCCGAGCCCGAGATTGTCCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCGTTCCCTTTCCGTGATCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGTGTGCTCGGGTGGAAGCCTGAATTCGATTTGGTGGAAGGTCTTGCAGACTCCTACAACTTGGACTTTGGCAGAGGCACTTTCAGGAAAGAGGCTGATTTCTCAACAGATGACATAATCCTTGGCAAGAGTTTGGTTCTTCAAGCTTGA

Protein sequence

MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA

Homology

[Close]

BLAST of Cla97C01G010590 vs. NCBI nr
Match: XP_008442117.1 (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis melo])

HSP 1 Score: 759.6 bits (1960), Expect = 5.1e-216
Identity = 372/383 (97.13%), Postives = 374/383 (97.65%), Query Frame = 0


Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK  SFSVLPSSLSDFNGARLH QVQYKRKVMQPKG LHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADY DFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEK VTFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Cla97C01G010590 vs. NCBI nr
Match: XP_022961476.1 (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucurbita moschata])

HSP 1 Score: 756.5 bits (1952), Expect = 4.3e-215
Identity = 368/383 (96.08%), Postives = 375/383 (97.91%), Query Frame = 0


Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK PSFSVLPSSLSDF+GARLH QVQYKRKVMQPKGALHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKSPSFSVLPSSLSDFHGARLHAQVQYKRKVMQPKGALHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           L+MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGES+ADY DFKSK+LHLKGDR
Sbjct: 61  LVMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFKSKVLHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGN+KASQQVFNISGEK VTFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGL DSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLTDSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Cla97C01G010590 vs. NCBI nr
Match: XP_004146391.1 (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis sativus] >KGN54798.1 hypothetical protein Csa_4G500330 [Cucumis sativus])

HSP 1 Score: 755.4 bits (1949), Expect = 9.6e-215
Identity = 370/383 (96.61%), Postives = 373/383 (97.39%), Query Frame = 0


Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK  SFSVLPSSLSDFNGARLH QVQYKRKVMQPKG LHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADY DFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEK V+FDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Cla97C01G010590 vs. NCBI nr
Match: XP_023515393.1 (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 754.6 bits (1947), Expect = 1.6e-214
Identity = 367/383 (95.82%), Postives = 374/383 (97.65%), Query Frame = 0


Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK PSFSVLPSSLSDF+GARLH QVQYKRKVMQPKGALHVTASA KNI
Sbjct: 1   MGIMANPMAAHHQKSPSFSVLPSSLSDFHGARLHAQVQYKRKVMQPKGALHVTASANKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           L+MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGES+ADY DFKSK+LHLKGDR
Sbjct: 61  LVMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFKSKVLHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGN+KASQQVFNISGEK VTFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGL DSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLTDSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Cla97C01G010590 vs. NCBI nr
Match: XP_022155488.1 (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Momordica charantia])

HSP 1 Score: 751.1 bits (1938), Expect = 1.8e-213
Identity = 363/383 (94.78%), Postives = 377/383 (98.43%), Query Frame = 0


Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMAKP+AAH QKLPSFS+LPSS SDFNGARLH+Q+QYK+KVMQPKGALHVTASAKKNI
Sbjct: 1   MGIMAKPIAAHQQKLPSFSLLPSSFSDFNGARLHSQLQYKKKVMQPKGALHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           LIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPVTQQLPGES+ADY +F SKILHLKGDR
Sbjct: 61  LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYAEFSSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           QDFDFVKSSLSAAGFDVVYDINGREAVEVEPI+DALPKLEQFIYCSSAGVYLK+DL PHF
Sbjct: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPIIDALPKLEQFIYCSSAGVYLKTDLPPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           +PNSGIQITQLGHVKDLAKAFVQVLGN+KASQQVFNISG+K VTFDGLAKACAKAGGFPE
Sbjct: 241 VPNSGIQITQLGHVKDLAKAFVQVLGNEKASQQVFNISGDKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGW+PEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWEPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Cla97C01G010590 vs. TrEMBL
Match: tr|A0A1S3B4I6|A0A1S3B4I6_CUCME (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486073 PE=4 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 3.4e-216
Identity = 372/383 (97.13%), Postives = 374/383 (97.65%), Query Frame = 0


Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK  SFSVLPSSLSDFNGARLH QVQYKRKVMQPKG LHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADY DFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEK VTFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Cla97C01G010590 vs. TrEMBL
Match: tr|A0A0A0KZ66|A0A0A0KZ66_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G500330 PE=4 SV=1)

HSP 1 Score: 755.4 bits (1949), Expect = 6.4e-215
Identity = 370/383 (96.61%), Postives = 373/383 (97.39%), Query Frame = 0


Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK  SFSVLPSSLSDFNGARLH QVQYKRKVMQPKG LHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADY DFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEK V+FDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]

BLAST of Cla97C01G010590 vs. TrEMBL
Match: tr|A0A067JHM3|A0A067JHM3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23195 PE=4 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 3.2e-198
Identity = 338/380 (88.95%), Postives = 356/380 (93.68%), Query Frame = 0


Query: 4   MAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIM 63
           MA+ +A   Q  PSFS+LPSS SDFNG RLH+Q+Q KRKV Q KGAL VTAS  KNILIM
Sbjct: 1   MARLVAVQQQTQPSFSLLPSSFSDFNGTRLHSQIQCKRKVWQTKGALQVTASTSKNILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDF 123
           GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+TQQLPGES+ +Y DF SKILHLKGDR+DF
Sbjct: 61  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQEYADFSSKILHLKGDRKDF 120

Query: 124 DFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           +FVKSSLSA GFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPH E D
Sbjct: 121 EFVKSSLSAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHAETD 180

Query: 184 AVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN
Sbjct: 181 AVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 240

Query: 244 SGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEI 303
           SG+QITQLGHVKDLAKAF+QVLGN+KAS+QVFNISGEK VTFDGLA+ACAKAGGFPEPE+
Sbjct: 241 SGVQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEL 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           VHYNPKEFDFGKKK FPFRDQHFFASIEKAK VLGWKPEFDLVEGLADSYNLDFGRGTFR
Sbjct: 301 VHYNPKEFDFGKKKAFPFRDQHFFASIEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTFR 360

Query: 364 KEADFSTDDIILGKSLVLQA 384
           KEADFSTDD+ILGKSLVLQA
Sbjct: 361 KEADFSTDDLILGKSLVLQA 380

[Close]

BLAST of Cla97C01G010590 vs. TrEMBL
Match: tr|A0A2I4EAT1|A0A2I4EAT1_9ROSI (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic isoform X2 OS=Juglans regia OX=51240 GN=LOC108987898 PE=4 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 5.1e-196
Identity = 332/378 (87.83%), Postives = 357/378 (94.44%), Query Frame = 0


Query: 4   MAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIM 63
           MAK +    QK PSFS+LP+SLSDFNG RLHTQ+Q KRKV +PKGAL ++AS+ K ILIM
Sbjct: 1   MAK-LVVLQQKQPSFSLLPASLSDFNGTRLHTQIQLKRKVWKPKGALRISASSTKKILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDF 123
           GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+TQQLPGESE DYTDF SKILHLKGDR+DF
Sbjct: 61  GGTRFIGLFLSRLLVKEGHQVTLFTRGKAPITQQLPGESEKDYTDFSSKILHLKGDRKDF 120

Query: 124 DFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           +FVK+SLSA GFDVVYDINGREAVEVEPILDALPKLEQ+IYCSSAGVYLKSDLLPHFE D
Sbjct: 121 EFVKASLSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFETD 180

Query: 184 AVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PN
Sbjct: 181 AVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 240

Query: 244 SGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEI 303
           SG+QITQLGHVKDLA+ FVQVLGN+KAS++VFNISGEK VTFDGLA+ACAKA GFPEPEI
Sbjct: 241 SGMQITQLGHVKDLARVFVQVLGNEKASKEVFNISGEKYVTFDGLARACAKAAGFPEPEI 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           +HYNPKEFDFGKKK FPFRDQHFFAS++KAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR
Sbjct: 301 IHYNPKEFDFGKKKSFPFRDQHFFASVDKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 360

Query: 364 KEADFSTDDIILGKSLVL 382
           KEADFSTDD+ILGKSLVL
Sbjct: 361 KEADFSTDDLILGKSLVL 377

[Close]

BLAST of Cla97C01G010590 vs. TrEMBL
Match: tr|A0A2P4LS63|A0A2P4LS63_QUESU (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_51406 PE=4 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 2.5e-195
Identity = 331/380 (87.11%), Postives = 358/380 (94.21%), Query Frame = 0


Query: 4   MAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIM 63
           MAK +    QK PSFS+LPSSLSDFNG RL +Q+Q KRKV +PKGALHV+AS+ K ILIM
Sbjct: 1   MAK-LVVVQQKQPSFSLLPSSLSDFNGTRLQSQIQLKRKVWKPKGALHVSASSAKKILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDF 123
           GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+TQQLPGES+ D+ DF SKILHLKGDR+D+
Sbjct: 61  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDKDFVDFSSKILHLKGDRKDY 120

Query: 124 DFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           +FVKSSLSA GFDVVYDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLPHFE D
Sbjct: 121 EFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFETD 180

Query: 184 AVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN
Sbjct: 181 AVDPKSRHKGKLETESLLTSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 240

Query: 244 SGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEI 303
           SG+QITQLGHVKDLA+AF+QVLGN+KAS+QVFNISG+K VTFDGLA+ACAKAGGFPEPEI
Sbjct: 241 SGVQITQLGHVKDLARAFIQVLGNEKASRQVFNISGDKYVTFDGLARACAKAGGFPEPEI 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           +H+NPKEFDFGKKK FPFRDQHFFASI+KAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR
Sbjct: 301 IHFNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 360

Query: 364 KEADFSTDDIILGKSLVLQA 384
           K ADFSTDD+ILGKSLVLQ+
Sbjct: 361 KAADFSTDDLILGKSLVLQS 379

[Close]

BLAST of Cla97C01G010590 vs. Swiss-Prot
Match: sp|Q9SA52|CP41B_ARATH (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CSP41B PE=1 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 6.0e-192
Identity = 323/379 (85.22%), Postives = 351/379 (92.61%), Query Frame = 0


Query: 4   MAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIM 63
           MAK M    Q  PSFS+L SSLSDFNGA+LH QVQYKRKV QPKGAL+V+AS++K ILIM
Sbjct: 1   MAKMMML-QQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDF 123
           GGTRFIG+FLSR+LVKEGHQVTLFTRGK+P+ +QLPGES+ D+ DF SKILHLKGDR+D+
Sbjct: 61  GGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDY 120

Query: 124 DFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           DFVKSSLSA GFDVVYDINGREA EVEPIL+ALPKLEQ+IYCSSAGVYLKSD+LPH E D
Sbjct: 121 DFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEED 180

Query: 184 AVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PN
Sbjct: 181 AVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 240

Query: 244 SGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEI 303
           SGIQI+QLGHVKDLA AF+ VLGN+KAS+++FNISGEK VTFDGLAKACAKAGGFPEPEI
Sbjct: 241 SGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEI 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           VHYNPKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFR
Sbjct: 301 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFR 360

Query: 364 KEADFSTDDIILGKSLVLQ 383
           KEADF+TDD+IL K LVLQ
Sbjct: 361 KEADFTTDDMILSKKLVLQ 378

[Close]

BLAST of Cla97C01G010590 vs. Swiss-Prot
Match: sp|Q9LYA9|CP41A_ARATH (Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CSP41A PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.9e-49
Identity = 119/328 (36.28%), Postives = 173/328 (52.74%), Query Frame = 0


Query: 57  KKNILIM----GGTRFIGIFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYTDFK 116
           KKN+LI+    GG   IG + ++ L+  GH VT+ T G   +   ++ P    ++     
Sbjct: 79  KKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGG 138

Query: 117 SKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPK--LEQFIYCSSA 176
            K +   G+  +   V + +    FDVV D NG++   V P++D      ++QF++ SSA
Sbjct: 139 GKTVW--GNPAN---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSA 198

Query: 177 GVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEW 236
           G+Y  ++  PH E DAV   + H   +  E  LA    NW S RP Y+ G  N    EEW
Sbjct: 199 GIYKSTEQPPHVEGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEW 258

Query: 237 FFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGN-DKASQQVFNISGEKNVTFDG 296
           FF R+   R +PIP SG+Q+T + HV+DL+      + N + AS  +FN   ++ VT DG
Sbjct: 259 FFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDG 318

Query: 297 LAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVE 356
           +AK CA A G    EIVHY+PK      KK F FR+ HF+A    AK +LGW+ + +L E
Sbjct: 319 MAKLCAAAAG-KTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPE 378

Query: 357 GLADSYNLDFGRGTFRKEADFSTDDIIL 376
            L + +      G  +KE  F  DD IL
Sbjct: 379 DLKERFEEYVKIGRDKKEIKFELDDKIL 397

[Close]

BLAST of Cla97C01G010590 vs. Swiss-Prot
Match: sp|Q8NBZ7|UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens OX=9606 GN=UXS1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.0e-11
Identity = 82/349 (23.50%), Postives = 147/349 (42.12%), Query Frame = 0


Query: 57  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 117 ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKL-EQF 176
             Y +   +I HL       +++ + +     + +  +N         +L    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKGVNWTSIR 236
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  +GV     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDK 296
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL    V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 297 ASQ-QVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

[Close]

BLAST of Cla97C01G010590 vs. Swiss-Prot
Match: sp|Q91XL3|UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus OX=10090 GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.0e-11
Identity = 82/349 (23.50%), Postives = 147/349 (42.12%), Query Frame = 0


Query: 57  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 117 ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKL-EQF 176
             Y +   +I HL       +++ + +     + +  +N         +L    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKGVNWTSIR 236
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  +GV     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDK 296
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL    V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 297 ASQ-QVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

[Close]

BLAST of Cla97C01G010590 vs. Swiss-Prot
Match: sp|Q5R885|UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii OX=9601 GN=UXS1 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.0e-11
Identity = 82/349 (23.50%), Postives = 147/349 (42.12%), Query Frame = 0


Query: 57  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 117 ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKL-EQF 176
             Y +   +I HL       +++ + +     + +  +N         +L    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKGVNWTSIR 236
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  +GV     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDK 296
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL    V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 297 ASQ-QVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

[Close]

BLAST of Cla97C01G010590 vs. TAIR10
Match: AT1G09340.1 (chloroplast RNA binding)

HSP 1 Score: 671.4 bits (1731), Expect = 3.3e-193
Identity = 323/379 (85.22%), Postives = 351/379 (92.61%), Query Frame = 0


Query: 4   MAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIM 63
           MAK M    Q  PSFS+L SSLSDFNGA+LH QVQYKRKV QPKGAL+V+AS++K ILIM
Sbjct: 1   MAKMMML-QQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDF 123
           GGTRFIG+FLSR+LVKEGHQVTLFTRGK+P+ +QLPGES+ D+ DF SKILHLKGDR+D+
Sbjct: 61  GGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDY 120

Query: 124 DFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           DFVKSSLSA GFDVVYDINGREA EVEPIL+ALPKLEQ+IYCSSAGVYLKSD+LPH E D
Sbjct: 121 DFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEED 180

Query: 184 AVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PN
Sbjct: 181 AVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 240

Query: 244 SGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEI 303
           SGIQI+QLGHVKDLA AF+ VLGN+KAS+++FNISGEK VTFDGLAKACAKAGGFPEPEI
Sbjct: 241 SGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEI 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           VHYNPKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFR
Sbjct: 301 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFR 360

Query: 364 KEADFSTDDIILGKSLVLQ 383
           KEADF+TDD+IL K LVLQ
Sbjct: 361 KEADFTTDDMILSKKLVLQ 378

[Close]

BLAST of Cla97C01G010590 vs. TAIR10
Match: AT3G63140.1 (chloroplast stem-loop binding protein of 41 kDa)

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-50
Identity = 119/328 (36.28%), Postives = 173/328 (52.74%), Query Frame = 0


Query: 57  KKNILIM----GGTRFIGIFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYTDFK 116
           KKN+LI+    GG   IG + ++ L+  GH VT+ T G   +   ++ P    ++     
Sbjct: 79  KKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGG 138

Query: 117 SKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPK--LEQFIYCSSA 176
            K +   G+  +   V + +    FDVV D NG++   V P++D      ++QF++ SSA
Sbjct: 139 GKTVW--GNPAN---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSA 198

Query: 177 GVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEW 236
           G+Y  ++  PH E DAV   + H   +  E  LA    NW S RP Y+ G  N    EEW
Sbjct: 199 GIYKSTEQPPHVEGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEW 258

Query: 237 FFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGN-DKASQQVFNISGEKNVTFDG 296
           FF R+   R +PIP SG+Q+T + HV+DL+      + N + AS  +FN   ++ VT DG
Sbjct: 259 FFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDG 318

Query: 297 LAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVE 356
           +AK CA A G    EIVHY+PK      KK F FR+ HF+A    AK +LGW+ + +L E
Sbjct: 319 MAKLCAAAAG-KTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPE 378

Query: 357 GLADSYNLDFGRGTFRKEADFSTDDIIL 376
            L + +      G  +KE  F  DD IL
Sbjct: 379 DLKERFEEYVKIGRDKKEIKFELDDKIL 397

[Close]

BLAST of Cla97C01G010590 vs. TAIR10
Match: AT1G75280.1 (NmrA-like negative transcriptional regulator family protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.8e-06
Identity = 43/162 (26.54%), Postives = 74/162 (45.68%), Query Frame = 0


Query: 54  ASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKI 113
           A+ K  IL++GGT +IG FL     K GH      R +A ++  + G++   + D    I
Sbjct: 2   ATEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTI 61

Query: 114 LHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLK 173
           LH  GD  D + +  ++      V+  +   + ++   I+ A+           AG  +K
Sbjct: 62  LH--GDLNDHESLVKAIKQVDV-VISTVGSMQILDQTKIISAI---------KEAG-NVK 121

Query: 174 SDLLPHFEVD-----AVDP-KSRHKGKLETESLLASKGVNWT 210
             L   F VD     AV+P KS   GK++    + ++G+ +T
Sbjct: 122 RFLPSEFGVDVDRTSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149

The following BLAST results are available for this feature:

BLAST of Cla97C01G010590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442117.1	5.1e-216	97.13	PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cuc...	[more]
XP_022961476.1	4.3e-215	96.08	chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucurbita mosc...	[more]
XP_004146391.1	9.6e-215	96.61	PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cuc...	[more]
XP_023515393.1	1.6e-214	95.82	chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucurbita pepo...	[more]
XP_022155488.1	1.8e-213	94.78	chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Momordica char...	[more]

BLAST of Cla97C01G010590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B4I6\|A0A1S3B4I6_CUCME	3.4e-216	97.13	chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Cucumis melo...	[more]
tr\|A0A0A0KZ66\|A0A0A0KZ66_CUCSA	6.4e-215	96.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G500330 PE=4 SV=1	[more]
tr\|A0A067JHM3\|A0A067JHM3_JATCU	3.2e-198	88.95	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23195 PE=4 SV=1	[more]
tr\|A0A2I4EAT1\|A0A2I4EAT1_9ROSI	5.1e-196	87.83	chloroplast stem-loop binding protein of 41 kDa b, chloroplastic isoform X2 OS=J...	[more]
tr\|A0A2P4LS63\|A0A2P4LS63_QUESU	2.5e-195	87.11	Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Quercus sube...	[more]

BLAST of Cla97C01G010590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SA52\|CP41B_ARATH	6.0e-192	85.22	Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis ...	[more]
sp\|Q9LYA9\|CP41A_ARATH	1.9e-49	36.28	Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis ...	[more]
sp\|Q8NBZ7\|UXS1_HUMAN	8.0e-11	23.50	UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens OX=9606 GN=UXS1 PE=1 SV=1	[more]
sp\|Q91XL3\|UXS1_MOUSE	8.0e-11	23.50	UDP-glucuronic acid decarboxylase 1 OS=Mus musculus OX=10090 GN=Uxs1 PE=1 SV=1	[more]
sp\|Q5R885\|UXS1_PONAB	8.0e-11	23.50	UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii OX=9601 GN=UXS1 PE=2 SV=1	[more]

BLAST of Cla97C01G010590 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09340.1	3.3e-193	85.22	chloroplast RNA binding	[more]
AT3G63140.1	1.1e-50	36.28	chloroplast stem-loop binding protein of 41 kDa	[more]
AT1G75280.1	2.8e-06	26.54	NmrA-like negative transcriptional regulator family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0050662	coenzyme binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR001509	Epimerase_deHydtase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0007623	circadian rhythm
biological_process	GO:0005996	monosaccharide metabolic process
biological_process	GO:0032544	plastid translation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0045727	positive regulation of translation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005773	vacuole
cellular_component	GO:0010319	stromule
cellular_component	GO:0048046	apoplast
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0016020	membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0010297	heteropolysaccharide binding
molecular_function	GO:0050662	coenzyme binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G010590.1	Cla97C01G010590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 41..356 e-value: 8.7E-47 score: 161.9
None	No IPR available	PANTHER	PTHR43725:SF2	CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA B, CHLOROPLASTIC	coord: 49..379
None	No IPR available	PANTHER	PTHR43725	FAMILY NOT NAMED	coord: 49..379
None	No IPR available	CDD	cd05265	SDR_a1	coord: 58..311 e-value: 2.74571E-95 score: 286.879
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 60..277 e-value: 2.7E-14 score: 53.1
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 57..351

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G010590	Cla010956	Watermelon (97103) v1	wmwmbB246
Cla97C01G010590	ClCG01G010830	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G010590	CmaCh10G011700	Cucurbita maxima (Rimu)	cmawmbB055
Cla97C01G010590	CmoCh10G012490	Cucurbita moschata (Rifu)	cmowmbB042
Cla97C01G010590	Lsi02G011420	Bottle gourd (USVL1VR-Ls)	lsiwmbB153
Cla97C01G010590	Carg27418	Silver-seed gourd	carwmbB0778

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G010590	Silver-seed gourd	carwmbB0050
Cla97C01G010590	Cucumber (Gy14) v2	cgybwmbB009
Cla97C01G010590	Cucumber (Gy14) v1	cgywmbB325
Cla97C01G010590	Cucurbita maxima (Rimu)	cmawmbB394
Cla97C01G010590	Cucurbita moschata (Rifu)	cmowmbB200
Cla97C01G010590	Wild cucumber (PI 183967)	cpiwmbB009
Cla97C01G010590	Cucumber (Chinese Long) v3	cucwmbB008
Cla97C01G010590	Cucumber (Chinese Long) v2	cuwmbB009
Cla97C01G010590	Melon (DHL92) v3.6.1	medwmbB126
Cla97C01G010590	Watermelon (97103) v1	wmwmbB239
Cla97C01G010590	Wax gourd	wgowmbB460