Cla97C01G010590.1 (mRNA) Watermelon (97103) v2

Overview
NameCla97C01G010590.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionchloroplast stem-loop binding protein of 41 kDa b, chloroplastic
LocationCla97Chr01 : 16141581 .. 16144525 (-)
Sequence length1152
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCATCATGGCAAAGCCAATGGCTGCTCACCACCAAAAATTGCCTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGACTTCAATGGCGCCAGACTTCACACCCAAGTTCAGGTCCATTTCTCTTCTCTTATCCTTATGTATCTTTCTGTTCTGGGTTTTGTTCTTCACTTTTAAATTTTGATTCTAACCGGAAATTATTTGAGGTGTTTTTGTTGTTAAGGCCTCAAAATCAGTGGAAACTGAATTGGGTTTCCCCATAAATGGCCATTGTAATTTGCGAGTTTCTTTTCCCCTCTTATTTGATTGGATTCATATATGTAGGTTGCCACTAAACACAAAAGCTTAGAAGAAATAGGATACATCGAAGGTTAATTGGATTCACGAAACTCAATGAACATGAAAGCTGTTAATAAGAATTTGAGGGTGAATGAGGTTGGAAGTCCGCTTTGATACCATGTTAAACACAAAAGCATAAACGAGTTAGGATATGCTGTGCGATAACTTGAATATTAATTTAATGGACGAAACCGATTAACATGTGAGGCTAACACGAATGAGAGGGGAAATGAGGTTTCGAACATGAGTCTTTTTGCTCTGATACCGTGTTAAACTACATTACATTAGGAACTATAGGTTGATGGATTATGGTGCATTTAGTCCTTTATATGTTTTCTCAGTTGGGTTTGGCCTTGGATTGCAGTATAAAAGGAAGGTTATGCAGCCAAAAGGAGCATTACATGTTACAGCAAGTGCCAAGAAGAATATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTCCTTGTCAAAGAGGGTCATCAGGTTTTGCCATTCTCTTTCTTCTTTCTTTGCTTGCTACATATTCCCCATTAGAAGATTCATGGAACTTGCTAATTTTGGCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATACTGATTTTAAATCCAAGGTCTTCTAAGCTTCCATTTAAGCGTAAAATCTGGTGGCTTTGATTGAAAAGAAATGTGGTATCATGGTTTTATTTTTAAGCTTATTACTTGTGAGTTTTTTGGAGTACAGATGATAAATTTGTCTATTTGGTTCTCATTTCCCAGATTCTGCATTTGAAGGGAGACAGACAAGACTTTGATTTTGTGAAATCCAGTCTCTCGGCCGCAGGGTTTGATGTAGTTTATGACATAAATGGTGAGTATGATTTCGAATAGATCTCTTTTTGTTTGAAATTCTTTGCCCTGATTTGTTTTAACACCATCATATCTAATCATTTTTTCGGTCTACACACTGTTGCATGATTTCAGGGCGAGAAGCCGTTGAAGTAGAGCCAATTTTAGATGCTTTGCCTAAGCTAGAGCAGTAAGATTTCCTAAATAATATCTGCTTTCTTTTCACAGCAATTGGTGTTAGTCATTTGCATCATGTTTTCCAATGCTAGAGAAACAGTTTTAATGTACAAAAGCATTTTGGTCCTTTCAAAGTATACATTAAGCCATTGCCACTGGCAATACAGGATTGGTTTGTCGAGTTTTTGTGCTGATAGTAGTCAGATTGTTGGACTTCAATTCAGAAACATTGCCGATATTGTTAATTTTATAAAGATACAATATTAAGCTATCAAGTTAAATTTAGATGTTTCAAGGTCAAGAATTCAAATCATGAAACAGGTCATAGATTCTGCAGCGTCTGATAAATGTGATGTCTCTAATTATTCTCAGGTTTATATACTGCTCTTCAGCTGGTGTCTACCTCAAGTCTGATCTCCTACCTCACTTTGAGGTACCTTTTCTTTCCCTTGTAAAGAAAAGCTTTCAGTTTACCTTCATTGTCCATTACCAAATAAGTGGTTCACTCAAAGCTTGACCGCCCCTTCTCTTTCATATCGTAGGTAGATGCAGTTGATCCAAAGAGTAGACACAAGGGGAAGCTTGAGACGGAGAGCTTACTGGCATCGAAGGGTGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAACCCTGTGGAAGAATGGTTCTTCCACCGGTTGAAAGCGGGTCGCCCCATTCCAATCCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGTCAGTGCTGTTAAGTACTATTTTTGCAACAGGAACAAATCATTAAGTCTGTTGTAGGTGGCAGGTCCATAAAGATCCTAATTAGAAAGCATTCACTGCCTTAATGTGAATAGCTTAGGAAAAGGATTATAGGTTCAAACATTTCTTGACGTTAACAGAGCGATCTAGATCGAATAAATAATTGAACTTTCTTGACAATTGCAGGATTTGGCAAAGGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATCTCTGGTGAAAAAAATGTTACATTTGATGGTTTAGCCAAAGCTTGTGCTAAGGTACGCTCTTGAAGACATAATCAGGACATCAGGACACCATTGTATTCATCATTGAGATAACATCTGAATTGGCTGATTTCTCCTGTTATAAACTTCACAGGCTGGAGGCTTTCCCGAGCCCGAGATTGTCCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCGTTCCCTTTCCGTGATCAGGTAATCTGGTCAATGTAATGATAAGTATGATGCAGCTTATTGGATTCTGATTGCTGAAATAACACCTTGGTTGTTGATATAAATGTCATGCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGTGTGCTCGGGTGGAAGCCTGAATTCGATTTGGTGGAAGGTCTTGCAGACTCCTACAACTTGGACTTTGGCAGAGGCACTTTCAGGAAAGAGGCTGATTTCTCAACAGATGACATAATCCTTGGCAAGAGTTTGGTTCTTCAAGCTTGA

mRNA sequence

ATGGGCATCATGGCAAAGCCAATGGCTGCTCACCACCAAAAATTGCCTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGACTTCAATGGCGCCAGACTTCACACCCAAGTTCAGTATAAAAGGAAGGTTATGCAGCCAAAAGGAGCATTACATGTTACAGCAAGTGCCAAGAAGAATATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTCCTTGTCAAAGAGGGTCATCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATACTGATTTTAAATCCAAGATTCTGCATTTGAAGGGAGACAGACAAGACTTTGATTTTGTGAAATCCAGTCTCTCGGCCGCAGGGTTTGATGTAGTTTATGACATAAATGGGCGAGAAGCCGTTGAAGTAGAGCCAATTTTAGATGCTTTGCCTAAGCTAGAGCAGTTTATATACTGCTCTTCAGCTGGTGTCTACCTCAAGTCTGATCTCCTACCTCACTTTGAGGTAGATGCAGTTGATCCAAAGAGTAGACACAAGGGGAAGCTTGAGACGGAGAGCTTACTGGCATCGAAGGGTGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAACCCTGTGGAAGAATGGTTCTTCCACCGGTTGAAAGCGGGTCGCCCCATTCCAATCCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGATTTGGCAAAGGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATCTCTGGTGAAAAAAATGTTACATTTGATGGTTTAGCCAAAGCTTGTGCTAAGGCTGGAGGCTTTCCCGAGCCCGAGATTGTCCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCGTTCCCTTTCCGTGATCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGTGTGCTCGGGTGGAAGCCTGAATTCGATTTGGTGGAAGGTCTTGCAGACTCCTACAACTTGGACTTTGGCAGAGGCACTTTCAGGAAAGAGGCTGATTTCTCAACAGATGACATAATCCTTGGCAAGAGTTTGGTTCTTCAAGCTTGA

Coding sequence (CDS)

ATGGGCATCATGGCAAAGCCAATGGCTGCTCACCACCAAAAATTGCCTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGACTTCAATGGCGCCAGACTTCACACCCAAGTTCAGTATAAAAGGAAGGTTATGCAGCCAAAAGGAGCATTACATGTTACAGCAAGTGCCAAGAAGAATATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTCCTTGTCAAAGAGGGTCATCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATACTGATTTTAAATCCAAGATTCTGCATTTGAAGGGAGACAGACAAGACTTTGATTTTGTGAAATCCAGTCTCTCGGCCGCAGGGTTTGATGTAGTTTATGACATAAATGGGCGAGAAGCCGTTGAAGTAGAGCCAATTTTAGATGCTTTGCCTAAGCTAGAGCAGTTTATATACTGCTCTTCAGCTGGTGTCTACCTCAAGTCTGATCTCCTACCTCACTTTGAGGTAGATGCAGTTGATCCAAAGAGTAGACACAAGGGGAAGCTTGAGACGGAGAGCTTACTGGCATCGAAGGGTGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAACCCTGTGGAAGAATGGTTCTTCCACCGGTTGAAAGCGGGTCGCCCCATTCCAATCCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGATTTGGCAAAGGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATCTCTGGTGAAAAAAATGTTACATTTGATGGTTTAGCCAAAGCTTGTGCTAAGGCTGGAGGCTTTCCCGAGCCCGAGATTGTCCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCGTTCCCTTTCCGTGATCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGTGTGCTCGGGTGGAAGCCTGAATTCGATTTGGTGGAAGGTCTTGCAGACTCCTACAACTTGGACTTTGGCAGAGGCACTTTCAGGAAAGAGGCTGATTTCTCAACAGATGACATAATCCTTGGCAAGAGTTTGGTTCTTCAAGCTTGA

Protein sequence

MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA
Homology
[Close]
BLAST of Cla97C01G010590.1 vs. NCBI nr
Match: XP_008442117.1 (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis melo])

HSP 1 Score: 759.6 bits (1960), Expect = 5.1e-216
Identity = 372/383 (97.13%), Postives = 374/383 (97.65%), Query Frame = 0 

Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK  SFSVLPSSLSDFNGARLH QVQYKRKVMQPKG LHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADY DFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEK VTFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]
BLAST of Cla97C01G010590.1 vs. NCBI nr
Match: XP_022961476.1 (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucurbita moschata])

HSP 1 Score: 756.5 bits (1952), Expect = 4.3e-215
Identity = 368/383 (96.08%), Postives = 375/383 (97.91%), Query Frame = 0 

Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK PSFSVLPSSLSDF+GARLH QVQYKRKVMQPKGALHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKSPSFSVLPSSLSDFHGARLHAQVQYKRKVMQPKGALHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           L+MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGES+ADY DFKSK+LHLKGDR
Sbjct: 61  LVMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFKSKVLHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGN+KASQQVFNISGEK VTFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGL DSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLTDSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]
BLAST of Cla97C01G010590.1 vs. NCBI nr
Match: XP_004146391.1 (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis sativus] >KGN54798.1 hypothetical protein Csa_4G500330 [Cucumis sativus])

HSP 1 Score: 755.4 bits (1949), Expect = 9.6e-215
Identity = 370/383 (96.61%), Postives = 373/383 (97.39%), Query Frame = 0 

Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK  SFSVLPSSLSDFNGARLH QVQYKRKVMQPKG LHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADY DFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEK V+FDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]
BLAST of Cla97C01G010590.1 vs. NCBI nr
Match: XP_023515393.1 (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 754.6 bits (1947), Expect = 1.6e-214
Identity = 367/383 (95.82%), Postives = 374/383 (97.65%), Query Frame = 0 

Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK PSFSVLPSSLSDF+GARLH QVQYKRKVMQPKGALHVTASA KNI
Sbjct: 1   MGIMANPMAAHHQKSPSFSVLPSSLSDFHGARLHAQVQYKRKVMQPKGALHVTASANKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           L+MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGES+ADY DFKSK+LHLKGDR
Sbjct: 61  LVMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFKSKVLHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGN+KASQQVFNISGEK VTFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGL DSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLTDSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]
BLAST of Cla97C01G010590.1 vs. NCBI nr
Match: XP_022155488.1 (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Momordica charantia])

HSP 1 Score: 751.1 bits (1938), Expect = 1.8e-213
Identity = 363/383 (94.78%), Postives = 377/383 (98.43%), Query Frame = 0 

Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMAKP+AAH QKLPSFS+LPSS SDFNGARLH+Q+QYK+KVMQPKGALHVTASAKKNI
Sbjct: 1   MGIMAKPIAAHQQKLPSFSLLPSSFSDFNGARLHSQLQYKKKVMQPKGALHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           LIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPVTQQLPGES+ADY +F SKILHLKGDR
Sbjct: 61  LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYAEFSSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           QDFDFVKSSLSAAGFDVVYDINGREAVEVEPI+DALPKLEQFIYCSSAGVYLK+DL PHF
Sbjct: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPIIDALPKLEQFIYCSSAGVYLKTDLPPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           +PNSGIQITQLGHVKDLAKAFVQVLGN+KASQQVFNISG+K VTFDGLAKACAKAGGFPE
Sbjct: 241 VPNSGIQITQLGHVKDLAKAFVQVLGNEKASQQVFNISGDKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGW+PEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWEPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]
BLAST of Cla97C01G010590.1 vs. TrEMBL
Match: tr|A0A1S3B4I6|A0A1S3B4I6_CUCME (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486073 PE=4 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 3.4e-216
Identity = 372/383 (97.13%), Postives = 374/383 (97.65%), Query Frame = 0 

Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK  SFSVLPSSLSDFNGARLH QVQYKRKVMQPKG LHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADY DFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEK VTFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]
BLAST of Cla97C01G010590.1 vs. TrEMBL
Match: tr|A0A0A0KZ66|A0A0A0KZ66_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G500330 PE=4 SV=1)

HSP 1 Score: 755.4 bits (1949), Expect = 6.4e-215
Identity = 370/383 (96.61%), Postives = 373/383 (97.39%), Query Frame = 0 

Query: 1   MGIMAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNI 60
           MGIMA PMAAHHQK  SFSVLPSSLSDFNGARLH QVQYKRKVMQPKG LHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADY DFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           +DFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEK V+FDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

[Close]
BLAST of Cla97C01G010590.1 vs. TrEMBL
Match: tr|A0A067JHM3|A0A067JHM3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23195 PE=4 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 3.2e-198
Identity = 338/380 (88.95%), Postives = 356/380 (93.68%), Query Frame = 0 

Query: 4   MAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIM 63
           MA+ +A   Q  PSFS+LPSS SDFNG RLH+Q+Q KRKV Q KGAL VTAS  KNILIM
Sbjct: 1   MARLVAVQQQTQPSFSLLPSSFSDFNGTRLHSQIQCKRKVWQTKGALQVTASTSKNILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDF 123
           GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+TQQLPGES+ +Y DF SKILHLKGDR+DF
Sbjct: 61  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQEYADFSSKILHLKGDRKDF 120

Query: 124 DFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           +FVKSSLSA GFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPH E D
Sbjct: 121 EFVKSSLSAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHAETD 180

Query: 184 AVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN
Sbjct: 181 AVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 240

Query: 244 SGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEI 303
           SG+QITQLGHVKDLAKAF+QVLGN+KAS+QVFNISGEK VTFDGLA+ACAKAGGFPEPE+
Sbjct: 241 SGVQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEL 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           VHYNPKEFDFGKKK FPFRDQHFFASIEKAK VLGWKPEFDLVEGLADSYNLDFGRGTFR
Sbjct: 301 VHYNPKEFDFGKKKAFPFRDQHFFASIEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTFR 360

Query: 364 KEADFSTDDIILGKSLVLQA 384
           KEADFSTDD+ILGKSLVLQA
Sbjct: 361 KEADFSTDDLILGKSLVLQA 380

[Close]
BLAST of Cla97C01G010590.1 vs. TrEMBL
Match: tr|A0A2I4EAT1|A0A2I4EAT1_9ROSI (chloroplast stem-loop binding protein of 41 kDa b, chloroplastic isoform X2 OS=Juglans regia OX=51240 GN=LOC108987898 PE=4 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 5.1e-196
Identity = 332/378 (87.83%), Postives = 357/378 (94.44%), Query Frame = 0 

Query: 4   MAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIM 63
           MAK +    QK PSFS+LP+SLSDFNG RLHTQ+Q KRKV +PKGAL ++AS+ K ILIM
Sbjct: 1   MAK-LVVLQQKQPSFSLLPASLSDFNGTRLHTQIQLKRKVWKPKGALRISASSTKKILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDF 123
           GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+TQQLPGESE DYTDF SKILHLKGDR+DF
Sbjct: 61  GGTRFIGLFLSRLLVKEGHQVTLFTRGKAPITQQLPGESEKDYTDFSSKILHLKGDRKDF 120

Query: 124 DFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           +FVK+SLSA GFDVVYDINGREAVEVEPILDALPKLEQ+IYCSSAGVYLKSDLLPHFE D
Sbjct: 121 EFVKASLSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFETD 180

Query: 184 AVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PN
Sbjct: 181 AVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 240

Query: 244 SGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEI 303
           SG+QITQLGHVKDLA+ FVQVLGN+KAS++VFNISGEK VTFDGLA+ACAKA GFPEPEI
Sbjct: 241 SGMQITQLGHVKDLARVFVQVLGNEKASKEVFNISGEKYVTFDGLARACAKAAGFPEPEI 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           +HYNPKEFDFGKKK FPFRDQHFFAS++KAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR
Sbjct: 301 IHYNPKEFDFGKKKSFPFRDQHFFASVDKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 360

Query: 364 KEADFSTDDIILGKSLVL 382
           KEADFSTDD+ILGKSLVL
Sbjct: 361 KEADFSTDDLILGKSLVL 377

[Close]
BLAST of Cla97C01G010590.1 vs. TrEMBL
Match: tr|A0A2P4LS63|A0A2P4LS63_QUESU (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_51406 PE=4 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 2.5e-195
Identity = 331/380 (87.11%), Postives = 358/380 (94.21%), Query Frame = 0 

Query: 4   MAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIM 63
           MAK +    QK PSFS+LPSSLSDFNG RL +Q+Q KRKV +PKGALHV+AS+ K ILIM
Sbjct: 1   MAK-LVVVQQKQPSFSLLPSSLSDFNGTRLQSQIQLKRKVWKPKGALHVSASSAKKILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDF 123
           GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+TQQLPGES+ D+ DF SKILHLKGDR+D+
Sbjct: 61  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDKDFVDFSSKILHLKGDRKDY 120

Query: 124 DFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           +FVKSSLSA GFDVVYDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLPHFE D
Sbjct: 121 EFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFETD 180

Query: 184 AVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN
Sbjct: 181 AVDPKSRHKGKLETESLLTSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 240

Query: 244 SGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEI 303
           SG+QITQLGHVKDLA+AF+QVLGN+KAS+QVFNISG+K VTFDGLA+ACAKAGGFPEPEI
Sbjct: 241 SGVQITQLGHVKDLARAFIQVLGNEKASRQVFNISGDKYVTFDGLARACAKAGGFPEPEI 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           +H+NPKEFDFGKKK FPFRDQHFFASI+KAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR
Sbjct: 301 IHFNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 360

Query: 364 KEADFSTDDIILGKSLVLQA 384
           K ADFSTDD+ILGKSLVLQ+
Sbjct: 361 KAADFSTDDLILGKSLVLQS 379

[Close]
BLAST of Cla97C01G010590.1 vs. Swiss-Prot
Match: sp|Q9SA52|CP41B_ARATH (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CSP41B PE=1 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 6.0e-192
Identity = 323/379 (85.22%), Postives = 351/379 (92.61%), Query Frame = 0 

Query: 4   MAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIM 63
           MAK M    Q  PSFS+L SSLSDFNGA+LH QVQYKRKV QPKGAL+V+AS++K ILIM
Sbjct: 1   MAKMMML-QQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDF 123
           GGTRFIG+FLSR+LVKEGHQVTLFTRGK+P+ +QLPGES+ D+ DF SKILHLKGDR+D+
Sbjct: 61  GGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDY 120

Query: 124 DFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           DFVKSSLSA GFDVVYDINGREA EVEPIL+ALPKLEQ+IYCSSAGVYLKSD+LPH E D
Sbjct: 121 DFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEED 180

Query: 184 AVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PN
Sbjct: 181 AVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 240

Query: 244 SGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEI 303
           SGIQI+QLGHVKDLA AF+ VLGN+KAS+++FNISGEK VTFDGLAKACAKAGGFPEPEI
Sbjct: 241 SGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEI 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           VHYNPKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFR
Sbjct: 301 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFR 360

Query: 364 KEADFSTDDIILGKSLVLQ 383
           KEADF+TDD+IL K LVLQ
Sbjct: 361 KEADFTTDDMILSKKLVLQ 378

[Close]
BLAST of Cla97C01G010590.1 vs. Swiss-Prot
Match: sp|Q9LYA9|CP41A_ARATH (Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CSP41A PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.9e-49
Identity = 119/328 (36.28%), Postives = 173/328 (52.74%), Query Frame = 0 

Query: 57  KKNILIM----GGTRFIGIFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYTDFK 116
           KKN+LI+    GG   IG + ++ L+  GH VT+ T G   +   ++ P    ++     
Sbjct: 79  KKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGG 138

Query: 117 SKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPK--LEQFIYCSSA 176
            K +   G+  +   V + +    FDVV D NG++   V P++D      ++QF++ SSA
Sbjct: 139 GKTVW--GNPAN---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSA 198

Query: 177 GVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEW 236
           G+Y  ++  PH E DAV   + H   +  E  LA    NW S RP Y+ G  N    EEW
Sbjct: 199 GIYKSTEQPPHVEGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEW 258

Query: 237 FFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGN-DKASQQVFNISGEKNVTFDG 296
           FF R+   R +PIP SG+Q+T + HV+DL+      + N + AS  +FN   ++ VT DG
Sbjct: 259 FFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDG 318

Query: 297 LAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVE 356
           +AK CA A G    EIVHY+PK      KK F FR+ HF+A    AK +LGW+ + +L E
Sbjct: 319 MAKLCAAAAG-KTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPE 378

Query: 357 GLADSYNLDFGRGTFRKEADFSTDDIIL 376
            L + +      G  +KE  F  DD IL
Sbjct: 379 DLKERFEEYVKIGRDKKEIKFELDDKIL 397

[Close]
BLAST of Cla97C01G010590.1 vs. Swiss-Prot
Match: sp|Q8NBZ7|UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens OX=9606 GN=UXS1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.0e-11
Identity = 82/349 (23.50%), Postives = 147/349 (42.12%), Query Frame = 0 

Query: 57  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 117 ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKL-EQF 176
             Y +   +I HL       +++ + +     + +  +N         +L    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKGVNWTSIR 236
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  +GV     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDK 296
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL    V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 297 ASQ-QVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

[Close]
BLAST of Cla97C01G010590.1 vs. Swiss-Prot
Match: sp|Q91XL3|UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus OX=10090 GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.0e-11
Identity = 82/349 (23.50%), Postives = 147/349 (42.12%), Query Frame = 0 

Query: 57  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 117 ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKL-EQF 176
             Y +   +I HL       +++ + +     + +  +N         +L    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKGVNWTSIR 236
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  +GV     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDK 296
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL    V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 297 ASQ-QVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

[Close]
BLAST of Cla97C01G010590.1 vs. Swiss-Prot
Match: sp|Q5R885|UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii OX=9601 GN=UXS1 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.0e-11
Identity = 82/349 (23.50%), Postives = 147/349 (42.12%), Query Frame = 0 

Query: 57  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 117 ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKL-EQF 176
             Y +   +I HL       +++ + +     + +  +N         +L    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKGVNWTSIR 236
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  +GV     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDK 296
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL    V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 297 ASQ-QVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

[Close]
BLAST of Cla97C01G010590.1 vs. TAIR10
Match: AT1G09340.1 (chloroplast RNA binding)

HSP 1 Score: 671.4 bits (1731), Expect = 3.3e-193
Identity = 323/379 (85.22%), Postives = 351/379 (92.61%), Query Frame = 0 

Query: 4   MAKPMAAHHQKLPSFSVLPSSLSDFNGARLHTQVQYKRKVMQPKGALHVTASAKKNILIM 63
           MAK M    Q  PSFS+L SSLSDFNGA+LH QVQYKRKV QPKGAL+V+AS++K ILIM
Sbjct: 1   MAKMMML-QQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDF 123
           GGTRFIG+FLSR+LVKEGHQVTLFTRGK+P+ +QLPGES+ D+ DF SKILHLKGDR+D+
Sbjct: 61  GGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDY 120

Query: 124 DFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           DFVKSSLSA GFDVVYDINGREA EVEPIL+ALPKLEQ+IYCSSAGVYLKSD+LPH E D
Sbjct: 121 DFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEED 180

Query: 184 AVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PN
Sbjct: 181 AVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 240

Query: 244 SGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEI 303
           SGIQI+QLGHVKDLA AF+ VLGN+KAS+++FNISGEK VTFDGLAKACAKAGGFPEPEI
Sbjct: 241 SGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEI 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           VHYNPKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFR
Sbjct: 301 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFR 360

Query: 364 KEADFSTDDIILGKSLVLQ 383
           KEADF+TDD+IL K LVLQ
Sbjct: 361 KEADFTTDDMILSKKLVLQ 378

[Close]
BLAST of Cla97C01G010590.1 vs. TAIR10
Match: AT3G63140.1 (chloroplast stem-loop binding protein of 41 kDa)

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-50
Identity = 119/328 (36.28%), Postives = 173/328 (52.74%), Query Frame = 0 

Query: 57  KKNILIM----GGTRFIGIFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYTDFK 116
           KKN+LI+    GG   IG + ++ L+  GH VT+ T G   +   ++ P    ++     
Sbjct: 79  KKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGG 138

Query: 117 SKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPK--LEQFIYCSSA 176
            K +   G+  +   V + +    FDVV D NG++   V P++D      ++QF++ SSA
Sbjct: 139 GKTVW--GNPAN---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSA 198

Query: 177 GVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEW 236
           G+Y  ++  PH E DAV   + H   +  E  LA    NW S RP Y+ G  N    EEW
Sbjct: 199 GIYKSTEQPPHVEGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEW 258

Query: 237 FFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGN-DKASQQVFNISGEKNVTFDG 296
           FF R+   R +PIP SG+Q+T + HV+DL+      + N + AS  +FN   ++ VT DG
Sbjct: 259 FFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDG 318

Query: 297 LAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVE 356
           +AK CA A G    EIVHY+PK      KK F FR+ HF+A    AK +LGW+ + +L E
Sbjct: 319 MAKLCAAAAG-KTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPE 378

Query: 357 GLADSYNLDFGRGTFRKEADFSTDDIIL 376
            L + +      G  +KE  F  DD IL
Sbjct: 379 DLKERFEEYVKIGRDKKEIKFELDDKIL 397

[Close]
BLAST of Cla97C01G010590.1 vs. TAIR10
Match: AT1G75280.1 (NmrA-like negative transcriptional regulator family protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.8e-06
Identity = 43/162 (26.54%), Postives = 74/162 (45.68%), Query Frame = 0 

Query: 54  ASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKI 113
           A+ K  IL++GGT +IG FL     K GH      R +A ++  + G++   + D    I
Sbjct: 2   ATEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTI 61

Query: 114 LHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLK 173
           LH  GD  D + +  ++      V+  +   + ++   I+ A+           AG  +K
Sbjct: 62  LH--GDLNDHESLVKAIKQVDV-VISTVGSMQILDQTKIISAI---------KEAG-NVK 121

Query: 174 SDLLPHFEVD-----AVDP-KSRHKGKLETESLLASKGVNWT 210
             L   F VD     AV+P KS   GK++    + ++G+ +T
Sbjct: 122 RFLPSEFGVDVDRTSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149

The following BLAST results are available for this feature:
BLAST of Cla97C01G010590.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008442117.15.1e-21697.13PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cuc... [more]
XP_022961476.14.3e-21596.08chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucurbita mosc... [more]
XP_004146391.19.6e-21596.61PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cuc... [more]
XP_023515393.11.6e-21495.82chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucurbita pepo... [more]
XP_022155488.11.8e-21394.78chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Momordica char... [more]
BLAST of Cla97C01G010590.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B4I6|A0A1S3B4I6_CUCME3.4e-21697.13chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Cucumis melo... [more]
tr|A0A0A0KZ66|A0A0A0KZ66_CUCSA6.4e-21596.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G500330 PE=4 SV=1[more]
tr|A0A067JHM3|A0A067JHM3_JATCU3.2e-19888.95Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23195 PE=4 SV=1[more]
tr|A0A2I4EAT1|A0A2I4EAT1_9ROSI5.1e-19687.83chloroplast stem-loop binding protein of 41 kDa b, chloroplastic isoform X2 OS=J... [more]
tr|A0A2P4LS63|A0A2P4LS63_QUESU2.5e-19587.11Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Quercus sube... [more]
BLAST of Cla97C01G010590.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SA52|CP41B_ARATH6.0e-19285.22Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis ... [more]
sp|Q9LYA9|CP41A_ARATH1.9e-4936.28Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis ... [more]
sp|Q8NBZ7|UXS1_HUMAN8.0e-1123.50UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens OX=9606 GN=UXS1 PE=1 SV=1[more]
sp|Q91XL3|UXS1_MOUSE8.0e-1123.50UDP-glucuronic acid decarboxylase 1 OS=Mus musculus OX=10090 GN=Uxs1 PE=1 SV=1[more]
sp|Q5R885|UXS1_PONAB8.0e-1123.50UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii OX=9601 GN=UXS1 PE=2 SV=1[more]
BLAST of Cla97C01G010590.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09340.13.3e-19385.22chloroplast RNA binding[more]
AT3G63140.11.1e-5036.28chloroplast stem-loop binding protein of 41 kDa[more]
AT1G75280.12.8e-0626.54NmrA-like negative transcriptional regulator family protein[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR001509Epimerase_deHydtase
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050662 coenzyme binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C01G010590Cla97C01G010590gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C01G010590.1Cla97C01G010590.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C01G010590.1.CDS.10Cla97C01G010590.1.CDS.10CDS
Cla97C01G010590.1.CDS.9Cla97C01G010590.1.CDS.9CDS
Cla97C01G010590.1.CDS.8Cla97C01G010590.1.CDS.8CDS
Cla97C01G010590.1.CDS.7Cla97C01G010590.1.CDS.7CDS
Cla97C01G010590.1.CDS.6Cla97C01G010590.1.CDS.6CDS
Cla97C01G010590.1.CDS.5Cla97C01G010590.1.CDS.5CDS
Cla97C01G010590.1.CDS.4Cla97C01G010590.1.CDS.4CDS
Cla97C01G010590.1.CDS.3Cla97C01G010590.1.CDS.3CDS
Cla97C01G010590.1.CDS.2Cla97C01G010590.1.CDS.2CDS
Cla97C01G010590.1.CDS.1Cla97C01G010590.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C01G010590.1.exon.10Cla97C01G010590.1.exon.10exon
Cla97C01G010590.1.exon.9Cla97C01G010590.1.exon.9exon
Cla97C01G010590.1.exon.8Cla97C01G010590.1.exon.8exon
Cla97C01G010590.1.exon.7Cla97C01G010590.1.exon.7exon
Cla97C01G010590.1.exon.6Cla97C01G010590.1.exon.6exon
Cla97C01G010590.1.exon.5Cla97C01G010590.1.exon.5exon
Cla97C01G010590.1.exon.4Cla97C01G010590.1.exon.4exon
Cla97C01G010590.1.exon.3Cla97C01G010590.1.exon.3exon
Cla97C01G010590.1.exon.2Cla97C01G010590.1.exon.2exon
Cla97C01G010590.1.exon.1Cla97C01G010590.1.exon.1exon


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.720coord: 41..356
e-value: 8.7E-47
score: 161.9
NoneNo IPR availablePANTHERPTHR43725:SF2CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA B, CHLOROPLASTICcoord: 49..379
NoneNo IPR availablePANTHERPTHR43725FAMILY NOT NAMEDcoord: 49..379
NoneNo IPR availableCDDcd05265SDR_a1coord: 58..311
e-value: 2.74571E-95
score: 286.879
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 60..277
e-value: 2.7E-14
score: 53.1
IPR036291NAD(P)-binding domain superfamilySUPERFAMILYSSF51735NAD(P)-binding Rossmann-fold domainscoord: 57..351