Cla010956 (gene) Watermelon (97103) v1

Overview
NameCla010956
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionNAD-dependent epimerase/dehydratase (AHRD V1 **-- C7QWY4_CYAP0); contains Interpro domain(s) IPR016040 NAD(P)-binding domain
LocationChr1 : 18825136 .. 18827362 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCCAAAAGGAGCATTACATGTTACAGCAAGTGCCAAGAAGAATATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTCCTTGTCAAAGAGGGTCATCAGGTTTTGCCATTCTCTTTCTTCTTTCTTTGCTTGCTACATATTCCCCATTAGAAGATTCATGGAACTTGCTAATTTTGGCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATACTGATTTTAAATCCAAGGTCTTCTAAGCTTCCATTTAAGCGTAAAATCTGGTGGCTTTGATTGAAAAGAAATGTGGTATCATGGTTTTATTTTTAAGCTTATTACTTGTGAGTTTTTTGGAGTACAGATGATAAATTTGTCTATTTGGTTCTCATTTCCCAGATTCTGCATTTGAAGGGAGACAGACAAGACTTTGATTTTGTGAAATCCAGTCTCTCGGCCGCAGGGTTTGATGTAGTTTATGACATAAATGGTGAGTATGATTTCGAATAGATCTCTTTTTGTTTGAAATTCTTTGCCCTGATTTGTTTTAACACCATCATATCTAATCATTTTTTCGGTCTACACACTGTTGCATGATTTCAGGGCGAGAAGCCGTTGAAGTAGAGCCAATTTTAGATGCTTTGCCTAAGCTAGAGCAGTAAGATTTCCTAAATAATATCTGCTTTCTTTTCACAGCAATTGGTGTTAGTCATTTGCATCATGTTTTCCAATGCTAGAGAAACAGTTTTAATGTACAAAAGCATTTTGGTCCTTTCAAAGTATACATTAAGCCATTGCCACTGGCAATACAGGATTGGTTTGTCGAGTTTTTGTGCTGATAGTAGTCAGATTGTTGGACTTCAATTCAGAAACATTGCCGATATTGTTAATTTTATAAAGATACAATATTAAGCTATCAAGTTAAATTTAGATGTTTCAAGGTCAAGAATTCAAATCATGAAACAGGTCATAGATTCTGCAGCGTCTGATAAATGTGATGTCTCTAATTATTCTCAGGTTTATATACTGCTCTTCAGCTGGTGTCTACCTCAAGTCTGATCTCCTACCTCACTTTGAGGTACCTTTTCTTTCCCTTGTAAAGAAAAGCTTTCAGTTTACCTTCATTGTCCATTACCAAATAAGTGGTTCACTCAAAGCTTGACCGCCCCTTCTCTTTCATATCGTAGGTAGATGCAGTTGATCCAAAGAGTAGACACAAGGGGAAGCTTGAGACGGAGAGCTTACTGGCATCGAAGGGTGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAACCCTGTGGAAGAATGGTTCTTCCACCGGTTGAAAGCGGGTCGCCCCATTCCAATCCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGTCAGTGCTGTTAAGTACTATTTTTGCAACAGGAACAAATCATTAAGTCTGTTGTAGGTGGCAGGTCCATAAAGATCCTAATTAGAAAGCATTCACTGCCTTAATGTGAATAGCTTAGGAAAAGGATTATAGGTTCAAACATTTCTTGACGTTAACAGAGCGATCTAGATCGAATAAATAATTGAACTTTCTTGACAATTGCAGGATTTGGCAAAGGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATCTCTGGTGAAAAAAATGTTACATTTGATGGTTTAGCCAAAGCTTGTGCTAAGGTACGCTCTTGAAGACATAATCAGGACATCAGGACACCATTGTATTCATCATTGAGATAACATCTGAATTGGCTGATTTCTCCTGTTATAAACTTCACAGGCTGGAGGCTTTCCCGAGCCCGAGATTGTCCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCGTTCCCTTTCCGTGATCAGGTAATCTGGTCAATGTAATGATAAGTATGATGCAGCTTATTGGATTCTGATTGCTGAAATAACACCTTGGTTGTTGATATAAATGTCATGCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGTGTGCTCGGGTGGAAGCCTGAATTCGATTTGGTGGAAGGTCTTGCAGACTCCTACAACTTGGACTTTGGCAGAGGCACTTTCAGGAAAGAGGCTGATTTCTCAACAGATGACATAATCCTTGGCAAGAGTTTGGTTCTTCAAGCTTGA

mRNA sequence

ATGCAGCCAAAAGGAGCATTACATGTTACAGCAAGTGCCAAGAAGAATATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTCCTTGTCAAAGAGGGTCATCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATACTGATTTTAAATCCAAGATTCTGCATTTGAAGGGAGACAGACAAGACTTTGATTTTGTGAAATCCAGTCTCTCGGCCGCAGGGTTTGATGTAGTTTATGACATAAATGGGCGAGAAGCCGTTGAAGTAGAGCCAATTTTAGATGCTTTGCCTAAGCTAGAGCAGTTTATATACTGCTCTTCAGCTGGTGTCTACCTCAAGTCTGATCTCCTACCTCACTTTGAGGTAGATGCAGTTGATCCAAAGAGTAGACACAAGGGGAAGCTTGAGACGGAGAGCTTACTGGCATCGAAGGGTGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAACCCTGTGGAAGAATGGTTCTTCCACCGGTTGAAAGCGGGTCGCCCCATTCCAATCCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGATTTGGCAAAGGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATCTCTGGTGAAAAAAATGTTACATTTGATGGTTTAGCCAAAGCTTGTGCTAAGGCTGGAGGCTTTCCCGAGCCCGAGATTGTCCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCGTTCCCTTTCCGTGATCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGTGTGCTCGGGTGGAAGCCTGAATTCGATTTGGTGGAAGGTCTTGCAGACTCCTACAACTTGGACTTTGGCAGAGGCACTTTCAGGAAAGAGGCTGATTTCTCAACAGATGACATAATCCTTGGCAAGAGTTTGGTTCTTCAAGCTTGA

Coding sequence (CDS)

ATGCAGCCAAAAGGAGCATTACATGTTACAGCAAGTGCCAAGAAGAATATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTCCTTGTCAAAGAGGGTCATCAGGTGACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATACTGATTTTAAATCCAAGATTCTGCATTTGAAGGGAGACAGACAAGACTTTGATTTTGTGAAATCCAGTCTCTCGGCCGCAGGGTTTGATGTAGTTTATGACATAAATGGGCGAGAAGCCGTTGAAGTAGAGCCAATTTTAGATGCTTTGCCTAAGCTAGAGCAGTTTATATACTGCTCTTCAGCTGGTGTCTACCTCAAGTCTGATCTCCTACCTCACTTTGAGGTAGATGCAGTTGATCCAAAGAGTAGACACAAGGGGAAGCTTGAGACGGAGAGCTTACTGGCATCGAAGGGTGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAACCCTGTGGAAGAATGGTTCTTCCACCGGTTGAAAGCGGGTCGCCCCATTCCAATCCCCAACTCAGGCATTCAAATTACACAACTTGGTCACGTCAAGGATTTGGCAAAGGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATCTCTGGTGAAAAAAATGTTACATTTGATGGTTTAGCCAAAGCTTGTGCTAAGGCTGGAGGCTTTCCCGAGCCCGAGATTGTCCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCGTTCCCTTTCCGTGATCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGTGTGCTCGGGTGGAAGCCTGAATTCGATTTGGTGGAAGGTCTTGCAGACTCCTACAACTTGGACTTTGGCAGAGGCACTTTCAGGAAAGAGGCTGATTTCTCAACAGATGACATAATCCTTGGCAAGAGTTTGGTTCTTCAAGCTTGA

Protein sequence

MQPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA
Homology
[Close]
BLAST of Cla010956 vs. Swiss-Prot
Match: CP41B_ARATH (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 7.6e-175
Identity = 294/338 (86.98%), Postives = 318/338 (94.08%), Query Frame = 1 

Query: 2   QPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEA 61
           QPKGAL+V+AS++K ILIMGGTRFIG+FLSR+LVKEGHQVTLFTRGK+P+ +QLPGES+ 
Sbjct: 41  QPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQ 100

Query: 62  DYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIY 121
           D+ DF SKILHLKGDR+D+DFVKSSLSA GFDVVYDINGREA EVEPIL+ALPKLEQ+IY
Sbjct: 101 DFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIY 160

Query: 122 CSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNP 181
           CSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNP
Sbjct: 161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220

Query: 182 VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVT 241
           VEEWFFHRLKAGRPIP+PNSGIQI+QLGHVKDLA AF+ VLGN+KAS+++FNISGEK VT
Sbjct: 221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVT 280

Query: 242 FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFD 301
           FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFD
Sbjct: 281 FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFD 340

Query: 302 LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQ 340
           LVEGL DSYNLDFGRGTFRKEADF+TDD+IL K LVLQ
Sbjct: 341 LVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378

[Close]
BLAST of Cla010956 vs. Swiss-Prot
Match: CP41A_ARATH (Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.9e-47
Identity = 119/328 (36.28%), Postives = 171/328 (52.13%), Query Frame = 1 

Query: 14  KKNILIM----GGTRFIGIFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYTDFK 73
           KKN+LI+    GG   IG + ++ L+  GH VT+ T G   +   ++ P    ++     
Sbjct: 79  KKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGG 138

Query: 74  SKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPK--LEQFIYCSSA 133
            K +   G+  +   V + +    FDVV D NG++   V P++D      ++QF++ SSA
Sbjct: 139 GKTVW--GNPAN---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSA 198

Query: 134 GVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNPVEEW 193
           G+Y  ++  PH E DAV   + H   +  E  LA    NW S RP Y+ G  N    EEW
Sbjct: 199 GIYKSTEQPPHVEGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEW 258

Query: 194 FFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGN-DKASQQVFNISGEKNVTFDG 253
           FF R+   R +PIP SG+Q+T + HV+DL+      + N + AS  +FN   ++ VT DG
Sbjct: 259 FFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDG 318

Query: 254 LAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVE 313
           +AK CA A G    EIVHY+PK      KK F FR+ HF+A    AK +LGW+ + +L E
Sbjct: 319 MAKLCAAAAG-KTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPE 378

Query: 314 GLADSYNLDFGRGTFRKEADFSTDDIIL 333
            L + +      G  +KE  F  DD IL
Sbjct: 379 DLKERFEEYVKIGRDKKEIKFELDDKIL 397

[Close]
BLAST of Cla010956 vs. Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.2e-08
Identity = 82/349 (23.50%), Postives = 145/349 (41.55%), Query Frame = 1 

Query: 14  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 73
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 74  ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKL-EQF 133
             Y +   +I HL       +++ + +     + +  +N         +L    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 134 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKGVNWTSIR 193
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  +GV     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 194 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDK 253
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL    V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 254 ASQ-QVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 313
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 314 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 335
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

[Close]
BLAST of Cla010956 vs. Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.2e-08
Identity = 82/349 (23.50%), Postives = 145/349 (41.55%), Query Frame = 1 

Query: 14  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 73
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 74  ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKL-EQF 133
             Y +   +I HL       +++ + +     + +  +N         +L    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 134 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKGVNWTSIR 193
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  +GV     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 194 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDK 253
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL    V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 254 ASQ-QVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 313
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 314 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 335
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

[Close]
BLAST of Cla010956 vs. Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.2e-08
Identity = 82/349 (23.50%), Postives = 145/349 (41.55%), Query Frame = 1 

Query: 14  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 73
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 74  ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKL-EQF 133
             Y +   +I HL       +++ + +     + +  +N         +L    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 134 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKGVNWTSIR 193
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  +GV     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 194 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDK 253
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL    V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 254 ASQ-QVFNISGEKNVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 313
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 314 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 335
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

[Close]
BLAST of Cla010956 vs. TrEMBL
Match: B9RFM2_RICCO (NAD dependent epimerase/dehydratase, putative OS=Ricinus communis GN=RCOM_1435770 PE=4 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 7.4e-177
Identity = 305/339 (89.97%), Postives = 322/339 (94.99%), Query Frame = 1 

Query: 2   QPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEA 61
           Q KGAL VTAS+ KNILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+TQ+LPGES+ 
Sbjct: 43  QAKGALQVTASSSKNILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQ 102

Query: 62  DYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIY 121
           DY DF SK+LHLKGDR+DFDFVKSSLSA GFDVVYDINGREA EV PILDALP LEQFIY
Sbjct: 103 DYADFSSKVLHLKGDRKDFDFVKSSLSAKGFDVVYDINGREADEVAPILDALPNLEQFIY 162

Query: 122 CSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNP 181
           CSSAGVYLKSDLLPH E DAVDPKSRHKGKLETESLL S GVNWTSIRPVYIYGPLNYNP
Sbjct: 163 CSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNP 222

Query: 182 VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVT 241
           VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAF+QVLGN+KAS+QVFNISGEK VT
Sbjct: 223 VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVT 282

Query: 242 FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFD 301
           FDGLA+ACAKAGGFPEPEIVHYNPKEFDFGKKK FPFRDQHFFAS++KAK VLGW+PEFD
Sbjct: 283 FDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVDKAKHVLGWEPEFD 342

Query: 302 LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA 341
           LVEGLADSYNLDFGRGTFRKEADF+TDD+ILGKSLVLQ+
Sbjct: 343 LVEGLADSYNLDFGRGTFRKEADFTTDDMILGKSLVLQS 381

[Close]
BLAST of Cla010956 vs. TrEMBL
Match: M5W4B3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007071mg PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 1.6e-176
Identity = 305/339 (89.97%), Postives = 322/339 (94.99%), Query Frame = 1 

Query: 2   QPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEA 61
           QPK AL VTAS+ K ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+TQQLPGES+ 
Sbjct: 45  QPKVALQVTASSAKKILIMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDK 104

Query: 62  DYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIY 121
           DYTDF SKILHLKGDR+D++FVKSSLSA GFDVVYDINGREA EV PIL+ LPKLEQ+IY
Sbjct: 105 DYTDFASKILHLKGDRKDYEFVKSSLSAEGFDVVYDINGREAEEVVPILEGLPKLEQYIY 164

Query: 122 CSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNP 181
           CSSAGVYLKSD LPHFE D VDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNP
Sbjct: 165 CSSAGVYLKSDQLPHFETDTVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNP 224

Query: 182 VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVT 241
           VEEWFFHRLKAGRPIP+PNSGIQITQLGHVKDLA AF++VLGN+KAS++VFNISGEK VT
Sbjct: 225 VEEWFFHRLKAGRPIPVPNSGIQITQLGHVKDLATAFIKVLGNEKASKEVFNISGEKYVT 284

Query: 242 FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFD 301
           FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKK FPFRDQHFFASI+KAKSVLGWKPEFD
Sbjct: 285 FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFD 344

Query: 302 LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA 341
           LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQ+
Sbjct: 345 LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQS 383

[Close]
BLAST of Cla010956 vs. TrEMBL
Match: A0A0D2STU4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G308300 PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 4.8e-176
Identity = 301/339 (88.79%), Postives = 319/339 (94.10%), Query Frame = 1 

Query: 2   QPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEA 61
           QPKGALH+ AS+ K ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPVTQQLPGES++
Sbjct: 41  QPKGALHIAASSTKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDS 100

Query: 62  DYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIY 121
           DY +FKSKILHLKGDR DFDFVKSSLSA G+DVVYDINGREA EVEPILDALP LEQFIY
Sbjct: 101 DYAEFKSKILHLKGDRMDFDFVKSSLSAEGYDVVYDINGREAAEVEPILDALPNLEQFIY 160

Query: 122 CSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNP 181
           CSSAGVYLKSD+LPH E DAVDPKSRHKGKL TESLL S+ VNWTS+RPVYIYGPLNYNP
Sbjct: 161 CSSAGVYLKSDMLPHCETDAVDPKSRHKGKLNTESLLESRDVNWTSVRPVYIYGPLNYNP 220

Query: 182 VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVT 241
           VEEWFFHRLKAGRPIPIPNSG+QITQLGHVKDLA AF+ VLGN+KAS+QVFNISGEK VT
Sbjct: 221 VEEWFFHRLKAGRPIPIPNSGVQITQLGHVKDLATAFIAVLGNEKASKQVFNISGEKYVT 280

Query: 242 FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFD 301
           F+GLAKACAKAGGFPEPEIVHYNPKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFD
Sbjct: 281 FNGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFD 340

Query: 302 LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA 341
           LVEGL DSYNLDFGRGTFRKEADFSTDD+ILGKS VLQ+
Sbjct: 341 LVEGLTDSYNLDFGRGTFRKEADFSTDDMILGKSFVLQS 379

[Close]
BLAST of Cla010956 vs. TrEMBL
Match: W9REG7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018888 PE=4 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 6.2e-176
Identity = 305/339 (89.97%), Postives = 323/339 (95.28%), Query Frame = 1 

Query: 2   QPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEA 61
           QPKGAL VTAS+ K ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAP++QQLPGES+A
Sbjct: 42  QPKGALQVTASSTKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDA 101

Query: 62  DYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIY 121
           DYTDF SKILHLKGDR+D D VKS LSA GFDVVYDINGREA EV PILDALP LEQ+IY
Sbjct: 102 DYTDFSSKILHLKGDRKDSDVVKSGLSAEGFDVVYDINGREADEVAPILDALPNLEQYIY 161

Query: 122 CSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNP 181
           CSSAGVYLKSDLLPHFE DAVDPKSRHKGKLETESLLA +GVNWTS+RPVYIYGPLNYNP
Sbjct: 162 CSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETESLLALRGVNWTSLRPVYIYGPLNYNP 221

Query: 182 VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVT 241
           VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA+AFVQVLGN+KAS+QVFNISGEK VT
Sbjct: 222 VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFVQVLGNEKASKQVFNISGEKYVT 281

Query: 242 FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFD 301
           FDGLA+ACAKAGGFPEPEI+HYNPKEFDFGKKK FPFRDQHFFAS+EKAKSVLG+KPEFD
Sbjct: 282 FDGLARACAKAGGFPEPEIIHYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGFKPEFD 341

Query: 302 LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA 341
           LVEGLADSY LDFGRGT+RKEADFSTDDIILGKSLVLQ+
Sbjct: 342 LVEGLADSYILDFGRGTYRKEADFSTDDIILGKSLVLQS 380

[Close]
BLAST of Cla010956 vs. TrEMBL
Match: A0A068VK15_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012344001 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 9.0e-175
Identity = 297/338 (87.87%), Postives = 320/338 (94.67%), Query Frame = 1 

Query: 1   MQPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESE 60
           + P+GALHV+ASA K ILIMGGTRFIGIFLSR LVKEGHQVTLFTRGKAP+ QQLPGES+
Sbjct: 40  LHPRGALHVSASAAKKILIMGGTRFIGIFLSRFLVKEGHQVTLFTRGKAPIAQQLPGESD 99

Query: 61  ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFI 120
            D+ DF SKILHLKGDR+DF+FVKSSL+A GFDVVYDINGREA E EPILDALP LEQ+I
Sbjct: 100 TDFADFSSKILHLKGDRKDFEFVKSSLAAEGFDVVYDINGREAAEAEPILDALPNLEQYI 159

Query: 121 YCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYN 180
           YCSSAGVYLKSD LPHFE+DAVDPKSRHKGKLETESLL ++GVNWTS+RPVYIYGPLNYN
Sbjct: 160 YCSSAGVYLKSDYLPHFEIDAVDPKSRHKGKLETESLLEARGVNWTSLRPVYIYGPLNYN 219

Query: 181 PVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNV 240
           PVEEWFFHRLKAGRPIPIPNSG+Q+TQLGHVKDLA AFV+VLGN+KAS++VFNISGEK V
Sbjct: 220 PVEEWFFHRLKAGRPIPIPNSGMQVTQLGHVKDLATAFVKVLGNEKASKEVFNISGEKYV 279

Query: 241 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEF 300
           TFDGLAKACAKA GFPEPEI+H+NPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEF
Sbjct: 280 TFDGLAKACAKAAGFPEPEIIHFNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEF 339

Query: 301 DLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVL 339
            LVEGLADSYNLDFGRGT+RKEADFSTDDIILGKSLVL
Sbjct: 340 ALVEGLADSYNLDFGRGTYRKEADFSTDDIILGKSLVL 377

[Close]
BLAST of Cla010956 vs. NCBI nr
Match: gi|659082960|ref|XP_008442117.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis melo])

HSP 1 Score: 674.1 bits (1738), Expect = 1.3e-190
Identity = 333/340 (97.94%), Postives = 335/340 (98.53%), Query Frame = 1 

Query: 1   MQPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESE 60
           MQPKG LHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESE
Sbjct: 44  MQPKGGLHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESE 103

Query: 61  ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFI 120
           ADY DFKSKILHLKGDR+DFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFI
Sbjct: 104 ADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFI 163

Query: 121 YCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYN 180
           YCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYN
Sbjct: 164 YCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYN 223

Query: 181 PVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNV 240
           PVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEK V
Sbjct: 224 PVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYV 283

Query: 241 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEF 300
           TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEF
Sbjct: 284 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEF 343

Query: 301 DLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA 341
           DLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA
Sbjct: 344 DLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA 383

[Close]
BLAST of Cla010956 vs. NCBI nr
Match: gi|449457309|ref|XP_004146391.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis sativus])

HSP 1 Score: 669.8 bits (1727), Expect = 2.4e-189
Identity = 331/340 (97.35%), Postives = 334/340 (98.24%), Query Frame = 1 

Query: 1   MQPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESE 60
           MQPKG LHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESE
Sbjct: 44  MQPKGGLHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESE 103

Query: 61  ADYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFI 120
           ADY DFKSKILHLKGDR+DFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFI
Sbjct: 104 ADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFI 163

Query: 121 YCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYN 180
           YCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASK VNWTSIRPVYIYGPLNYN
Sbjct: 164 YCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYN 223

Query: 181 PVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNV 240
           PVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEK V
Sbjct: 224 PVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYV 283

Query: 241 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEF 300
           +FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEF
Sbjct: 284 SFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEF 343

Query: 301 DLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA 341
           DLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA
Sbjct: 344 DLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA 383

[Close]
BLAST of Cla010956 vs. NCBI nr
Match: gi|1009116591|ref|XP_015874856.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 642.9 bits (1657), Expect = 3.2e-181
Identity = 311/339 (91.74%), Postives = 326/339 (96.17%), Query Frame = 1 

Query: 2   QPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEA 61
           QPKGALHVTAS+KK ILIMGGTRFIG+FLSRLLVK+GHQVTLFTRGKAP+T+QLPGES+ 
Sbjct: 43  QPKGALHVTASSKKKILIMGGTRFIGVFLSRLLVKDGHQVTLFTRGKAPITKQLPGESDK 102

Query: 62  DYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIY 121
           DYTDF SKILHLKGDR+DFDFVKSSLSA GFDVVYDINGREAVEVEPILDALPKLEQFIY
Sbjct: 103 DYTDFSSKILHLKGDRKDFDFVKSSLSAEGFDVVYDINGREAVEVEPILDALPKLEQFIY 162

Query: 122 CSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNP 181
           CSSAGVYLKSDLLPHFE DAVDPKSRHKGKLETESLL S+ VNWTSIRPVYIYGPLNYNP
Sbjct: 163 CSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETESLLKSRDVNWTSIRPVYIYGPLNYNP 222

Query: 182 VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVT 241
           VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAK F  VLGN+KAS+QVFNISGEK VT
Sbjct: 223 VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKVFADVLGNEKASKQVFNISGEKYVT 282

Query: 242 FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFD 301
           FDGLA+ACAKAGGFPEPEI+HYNPKEFDFGKKK FPFRDQHFFAS+EKAKSVLGWKPEFD
Sbjct: 283 FDGLARACAKAGGFPEPEIIHYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGWKPEFD 342

Query: 302 LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA 341
           LVEGLADSYNLDFGRGT+RKEADF TDDIILGKSLVLQ+
Sbjct: 343 LVEGLADSYNLDFGRGTYRKEADFETDDIILGKSLVLQS 381

[Close]
BLAST of Cla010956 vs. NCBI nr
Match: gi|802755325|ref|XP_012088856.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Jatropha curcas])

HSP 1 Score: 640.6 bits (1651), Expect = 1.6e-180
Identity = 312/339 (92.04%), Postives = 325/339 (95.87%), Query Frame = 1 

Query: 2   QPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEA 61
           Q KGAL VTAS  KNILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+TQQLPGES+ 
Sbjct: 42  QTKGALQVTASTSKNILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQ 101

Query: 62  DYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIY 121
           +Y DF SKILHLKGDR+DF+FVKSSLSA GFDVVYDINGREAVEVEPILDALPKLEQFIY
Sbjct: 102 EYADFSSKILHLKGDRKDFEFVKSSLSAKGFDVVYDINGREAVEVEPILDALPKLEQFIY 161

Query: 122 CSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNP 181
           CSSAGVYLKSDLLPH E DAVDPKSRHKGKLETESLL SKGVNWTSIRPVYIYGPLNYNP
Sbjct: 162 CSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNP 221

Query: 182 VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVT 241
           VEEWFFHRLKAGRPIPIPNSG+QITQLGHVKDLAKAF+QVLGN+KAS+QVFNISGEK VT
Sbjct: 222 VEEWFFHRLKAGRPIPIPNSGVQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVT 281

Query: 242 FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFD 301
           FDGLA+ACAKAGGFPEPE+VHYNPKEFDFGKKK FPFRDQHFFASIEKAK VLGWKPEFD
Sbjct: 282 FDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKHVLGWKPEFD 341

Query: 302 LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA 341
           LVEGLADSYNLDFGRGTFRKEADFSTDD+ILGKSLVLQA
Sbjct: 342 LVEGLADSYNLDFGRGTFRKEADFSTDDLILGKSLVLQA 380

[Close]
BLAST of Cla010956 vs. NCBI nr
Match: gi|747089109|ref|XP_011092178.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Sesamum indicum])

HSP 1 Score: 633.3 bits (1632), Expect = 2.5e-178
Identity = 306/339 (90.27%), Postives = 325/339 (95.87%), Query Frame = 1 

Query: 2   QPKGALHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEA 61
           QPKGAL VTAS+ K ILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESEA
Sbjct: 43  QPKGALRVTASSTKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEA 102

Query: 62  DYTDFKSKILHLKGDRQDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIY 121
           D+ DF SKILHLKGDR+DF+FVKSSL+A GFDVVYDINGREAVEVEPIL+ALP LEQ+IY
Sbjct: 103 DFADFSSKILHLKGDRKDFEFVKSSLAAEGFDVVYDINGREAVEVEPILEALPNLEQYIY 162

Query: 122 CSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKGVNWTSIRPVYIYGPLNYNP 181
           CSSAGVYLKSD  PHFE+DAVDPKSRHKGKLETESLL S+GVNWTSIRPVYIYGPLNYNP
Sbjct: 163 CSSAGVYLKSDYPPHFEIDAVDPKSRHKGKLETESLLQSRGVNWTSIRPVYIYGPLNYNP 222

Query: 182 VEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFVQVLGNDKASQQVFNISGEKNVT 241
           VEEWFFHRLKAGRPIPIPNSG+Q+TQLGHVKDLA AF++VLGN+KAS++VFNISGEK VT
Sbjct: 223 VEEWFFHRLKAGRPIPIPNSGMQVTQLGHVKDLATAFIKVLGNEKASREVFNISGEKYVT 282

Query: 242 FDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFD 301
           FDGLAKACAKA GFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFD
Sbjct: 283 FDGLAKACAKAAGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFD 342

Query: 302 LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA 341
           LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQ+
Sbjct: 343 LVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQS 381

The following BLAST results are available for this feature:
BLAST of Cla010956 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CP41B_ARATH7.6e-17586.98Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis ... [more]
CP41A_ARATH7.9e-4736.28Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis ... [more]
UXS1_PONAB3.2e-0823.50UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1[more]
UXS1_MOUSE3.2e-0823.50UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=1 SV=1[more]
UXS1_HUMAN3.2e-0823.50UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1[more]
BLAST of Cla010956 vs. TrEMBL
Match NameE-valueIdentityDescription
B9RFM2_RICCO7.4e-17789.97NAD dependent epimerase/dehydratase, putative OS=Ricinus communis GN=RCOM_143577... [more]
M5W4B3_PRUPE1.6e-17689.97Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007071mg PE=4 SV=1[more]
A0A0D2STU4_GOSRA4.8e-17688.79Uncharacterized protein OS=Gossypium raimondii GN=B456_007G308300 PE=4 SV=1[more]
W9REG7_9ROSA6.2e-17689.97Uncharacterized protein OS=Morus notabilis GN=L484_018888 PE=4 SV=1[more]
A0A068VK15_COFCA9.0e-17587.87Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012344001 PE=4 SV=1[more]
BLAST of Cla010956 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082960|ref|XP_008442117.1|1.3e-19097.94PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cuc... [more]
gi|449457309|ref|XP_004146391.1|2.4e-18997.35PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cuc... [more]
gi|1009116591|ref|XP_015874856.1|3.2e-18191.74PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ziz... [more]
gi|802755325|ref|XP_012088856.1|1.6e-18092.04PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Jat... [more]
gi|747089109|ref|XP_011092178.1|2.5e-17890.27PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ses... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0007623 circadian rhythm
biological_process GO:0005996 monosaccharide metabolic process
biological_process GO:0032544 plastid translation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0045727 positive regulation of translation
biological_process GO:0006364 rRNA processing
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005773 vacuole
cellular_component GO:0010319 stromule
cellular_component GO:0010287 plastoglobule
cellular_component GO:0005840 ribosome
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005777 peroxisome
cellular_component GO:0016020 membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0048046 apoplast
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0010297 heteropolysaccharide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla010956Cla010956.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratase, N-terminal domainPFAMPF01370Epimerasecoord: 17..234
score: 1.9
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 14..197
score: 1.1
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 14..308
score: 2.47
NoneNo IPR availableGENE3DG3DSA:3.90.25.10coord: 198..309
score: 2.0
NoneNo IPR availablePANTHERPTHR10366NAD DEPENDENT EPIMERASE/DEHYDRATASEcoord: 16..336
score: 4.0E
NoneNo IPR availablePANTHERPTHR10366:SF289CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA B, CHLOROPLASTICcoord: 16..336
score: 4.0E