Cla97C01G001180 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G001180
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Unknown protein
Location	Cla97Chr01 : 898208 .. 898540 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCAAGTCGAGAGGATCCCATCAATGACTGACAACTCAGTGGATAGTGATGGCTCAAAAGATGCTCAAGGTCACCATGATCTCCATGACGAGGATGTTTCACGTCCCCGTTCTGAGCATAAACAAGGTTCACATGCTGAGCACGAGCACAATGATGATTTTGATCCCCATGATGATCATAATGCTGGCAACGATTTCGAACATGTCATGAGGGATCACGCCGACGAGGACCATTTACCAGAGCCTGAAACGATCTCGAAGAGGGGCAAAAGGAAGAGAAAAGCACATGAGGAGCACGAACACGACGGGTTTGCCTACTGCAGAGCTTAG

mRNA sequence

ATGGACCAAGTCGAGAGGATCCCATCAATGACTGACAACTCAGTGGATAGTGATGGCTCAAAAGATGCTCAAGGTCACCATGATCTCCATGACGAGGATGTTTCACGTCCCCGTTCTGAGCATAAACAAGGTTCACATGCTGAGCACGAGCACAATGATGATTTTGATCCCCATGATGATCATAATGCTGGCAACGATTTCGAACATGTCATGAGGGATCACGCCGACGAGGACCATTTACCAGAGCCTGAAACGATCTCGAAGAGGGGCAAAAGGAAGAGAAAAGCACATGAGGAGCACGAACACGACGGGTTTGCCTACTGCAGAGCTTAG

Coding sequence (CDS)

ATGGACCAAGTCGAGAGGATCCCATCAATGACTGACAACTCAGTGGATAGTGATGGCTCAAAAGATGCTCAAGGTCACCATGATCTCCATGACGAGGATGTTTCACGTCCCCGTTCTGAGCATAAACAAGGTTCACATGCTGAGCACGAGCACAATGATGATTTTGATCCCCATGATGATCATAATGCTGGCAACGATTTCGAACATGTCATGAGGGATCACGCCGACGAGGACCATTTACCAGAGCCTGAAACGATCTCGAAGAGGGGCAAAAGGAAGAGAAAAGCACATGAGGAGCACGAACACGACGGGTTTGCCTACTGCAGAGCTTAG

Protein sequence

MDQVERIPSMTDNSVDSDGSKDAQGHHDLHDEDVSRPRSEHKQGSHAEHEHNDDFDPHDDHNAGNDFEHVMRDHADEDHLPEPETISKRGKRKRKAHEEHEHDGFAYCRA

Homology

[Close]

BLAST of Cla97C01G001180 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_5G141180 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 7.0e-09
Identity = 57/113 (50.44%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 1   MDQVERIPSMTDNSVDSDGSKDAQGH---HDLHDEDVSRPRSEHKQGSHAEXXXXXXXXX 60
           +DQ +R PS+ D S DSDG KDAQGH   HDLH+ED+S             XXXXXXXXX
Sbjct: 318 VDQAKRAPSVIDVSEDSDGPKDAQGHFDDHDLHNEDISNXXXXXXXXXXXXXXXXXXXXX 377

Query: 61  XXXXXXXXXXXXXMRXHADEDHLPEPETISKRGKRKRKAHEEHEHDGFAYCRA 111
           XX           MR H  ED LPEPE   KR KR+ KAH+EH H+ F+Y ++
Sbjct: 378 XXDHDIDNNSERFMRDHV-EDRLPEPEMSMKRCKREGKAHKEHNHNVFSYLKS 429

[Close]

BLAST of Cla97C01G001180 vs. NCBI nr
Match: XP_011654656.1 (PREDICTED: uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 7.0e-09
Identity = 57/113 (50.44%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 1   MDQVERIPSMTDNSVDSDGSKDAQGH---HDLHDEDVSRPRSEHKQGSHAEXXXXXXXXX 60
           +DQ +R PS+ D S DSDG KDAQGH   HDLH+ED+S             XXXXXXXXX
Sbjct: 401 VDQAKRAPSVIDVSEDSDGPKDAQGHFDDHDLHNEDISNXXXXXXXXXXXXXXXXXXXXX 460

Query: 61  XXXXXXXXXXXXXMRXHADEDHLPEPETISKRGKRKRKAHEEHEHDGFAYCRA 111
           XX           MR H  ED LPEPE   KR KR+ KAH+EH H+ F+Y ++
Sbjct: 461 XXDHDIDNNSERFMRDHV-EDRLPEPEMSMKRCKREGKAHKEHNHNVFSYLKS 512

[Close]

BLAST of Cla97C01G001180 vs. NCBI nr
Match: XP_011654657.1 (PREDICTED: uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 7.0e-09
Identity = 57/113 (50.44%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 1   MDQVERIPSMTDNSVDSDGSKDAQGH---HDLHDEDVSRPRSEHKQGSHAEXXXXXXXXX 60
           +DQ +R PS+ D S DSDG KDAQGH   HDLH+ED+S             XXXXXXXXX
Sbjct: 399 VDQAKRAPSVIDVSEDSDGPKDAQGHFDDHDLHNEDISNXXXXXXXXXXXXXXXXXXXXX 458

Query: 61  XXXXXXXXXXXXXMRXHADEDHLPEPETISKRGKRKRKAHEEHEHDGFAYCRA 111
           XX           MR H  ED LPEPE   KR KR+ KAH+EH H+ F+Y ++
Sbjct: 459 XXDHDIDNNSERFMRDHV-EDRLPEPEMSMKRCKREGKAHKEHNHNVFSYLKS 510

[Close]

BLAST of Cla97C01G001180 vs. NCBI nr
Match: XP_008437500.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 2.0e-08
Identity = 49/112 (43.75%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 2   DQVERIPSMTDNSVDSDGSKDAQGH---HDLHDEDVSRPRSEHKQGSHAEXXXXXXXXXX 61
           DQ ER PS+ D S +SDG KDAQG    HDLH+ED+S P           XXXX      
Sbjct: 403 DQAERAPSVIDISEESDGPKDAQGQFDDHDLHNEDISNPXXXXXXXXXXXXXXXDNCDPH 462

Query: 62  XXXXXXXXXXXXMRXHADEDHLPEPETISKRGKRKRKAHEEHEHDGFAYCRA 111
                       MR H  EDHLPEPE   KR KR+ K+ EEH+H+ F++ ++
Sbjct: 463 DNHDIDNNSVRFMRDHV-EDHLPEPEMSMKRCKREGKSREEHKHNVFSHLKS 513

[Close]

BLAST of Cla97C01G001180 vs. NCBI nr
Match: XP_008437501.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 2.0e-08
Identity = 49/112 (43.75%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 2   DQVERIPSMTDNSVDSDGSKDAQGH---HDLHDEDVSRPRSEHKQGSHAEXXXXXXXXXX 61
           DQ ER PS+ D S +SDG KDAQG    HDLH+ED+S P           XXXX      
Sbjct: 401 DQAERAPSVIDISEESDGPKDAQGQFDDHDLHNEDISNPXXXXXXXXXXXXXXXDNCDPH 460

Query: 62  XXXXXXXXXXXXMRXHADEDHLPEPETISKRGKRKRKAHEEHEHDGFAYCRA 111
                       MR H  EDHLPEPE   KR KR+ K+ EEH+H+ F++ ++
Sbjct: 461 DNHDIDNNSVRFMRDHV-EDHLPEPEMSMKRCKREGKSREEHKHNVFSHLKS 511

[Close]

BLAST of Cla97C01G001180 vs. TrEMBL
Match: tr|A0A0A0KM59|A0A0A0KM59_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.6e-09
Identity = 57/113 (50.44%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 1   MDQVERIPSMTDNSVDSDGSKDAQGH---HDLHDEDVSRPRSEHKQGSHAEXXXXXXXXX 60
           +DQ +R PS+ D S DSDG KDAQGH   HDLH+ED+S             XXXXXXXXX
Sbjct: 318 VDQAKRAPSVIDVSEDSDGPKDAQGHFDDHDLHNEDISNXXXXXXXXXXXXXXXXXXXXX 377

Query: 61  XXXXXXXXXXXXXMRXHADEDHLPEPETISKRGKRKRKAHEEHEHDGFAYCRA 111
           XX           MR H  ED LPEPE   KR KR+ KAH+EH H+ F+Y ++
Sbjct: 378 XXDHDIDNNSERFMRDHV-EDRLPEPEMSMKRCKREGKAHKEHNHNVFSYLKS 429

[Close]

BLAST of Cla97C01G001180 vs. TrEMBL
Match: tr|A0A1S3ATU8|A0A1S3ATU8_CUCME (uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-08
Identity = 49/112 (43.75%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 2   DQVERIPSMTDNSVDSDGSKDAQGH---HDLHDEDVSRPRSEHKQGSHAEXXXXXXXXXX 61
           DQ ER PS+ D S +SDG KDAQG    HDLH+ED+S P           XXXX      
Sbjct: 403 DQAERAPSVIDISEESDGPKDAQGQFDDHDLHNEDISNPXXXXXXXXXXXXXXXDNCDPH 462

Query: 62  XXXXXXXXXXXXMRXHADEDHLPEPETISKRGKRKRKAHEEHEHDGFAYCRA 111
                       MR H  EDHLPEPE   KR KR+ K+ EEH+H+ F++ ++
Sbjct: 463 DNHDIDNNSVRFMRDHV-EDHLPEPEMSMKRCKREGKSREEHKHNVFSHLKS 513

[Close]

BLAST of Cla97C01G001180 vs. TrEMBL
Match: tr|A0A1S3AUB0|A0A1S3AUB0_CUCME (uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-08
Identity = 49/112 (43.75%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 2   DQVERIPSMTDNSVDSDGSKDAQGH---HDLHDEDVSRPRSEHKQGSHAEXXXXXXXXXX 61
           DQ ER PS+ D S +SDG KDAQG    HDLH+ED+S P           XXXX      
Sbjct: 401 DQAERAPSVIDISEESDGPKDAQGQFDDHDLHNEDISNPXXXXXXXXXXXXXXXDNCDPH 460

Query: 62  XXXXXXXXXXXXMRXHADEDHLPEPETISKRGKRKRKAHEEHEHDGFAYCRA 111
                       MR H  EDHLPEPE   KR KR+ K+ EEH+H+ F++ ++
Sbjct: 461 DNHDIDNNSVRFMRDHV-EDHLPEPEMSMKRCKREGKSREEHKHNVFSHLKS 511

The following BLAST results are available for this feature:

BLAST of Cla97C01G001180 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49944.1	7.0e-09	50.44	hypothetical protein Csa_5G141180 [Cucumis sativus]	[more]
XP_011654656.1	7.0e-09	50.44	PREDICTED: uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus]	[more]
XP_011654657.1	7.0e-09	50.44	PREDICTED: uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus]	[more]
XP_008437500.1	2.0e-08	43.75	PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo]	[more]
XP_008437501.1	2.0e-08	43.75	PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo]	[more]

BLAST of Cla97C01G001180 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KM59\|A0A0A0KM59_CUCSA	4.6e-09	50.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1	[more]
tr\|A0A1S3ATU8\|A0A1S3ATU8_CUCME	1.3e-08	43.75	uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3AUB0\|A0A1S3AUB0_CUCME	1.3e-08	43.75	uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cla97C01G001180 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C01G001180 vs. TAIR10


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008234	cysteine-type peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G001180.1	Cla97C01G001180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..89

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G001180	Csa5G141180	Cucumber (Chinese Long) v2	cuwmbB336
Cla97C01G001180	MELO3C005820	Melon (DHL92) v3.5.1	mewmbB008
Cla97C01G001180	ClCG01G001140	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G001180	CSPI05G03910	Wild cucumber (PI 183967)	cpiwmbB349
Cla97C01G001180	Cucsa.193150	Cucumber (Gy14) v1	cgywmbB357
Cla97C01G001180	CsGy5G001140	Cucumber (Gy14) v2	cgybwmbB319
Cla97C01G001180	MELO3C005820.2	Melon (DHL92) v3.6.1	medwmbB006
Cla97C01G001180	CsaV3_5G001270	Cucumber (Chinese Long) v3	cucwmbB351

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G001180	Watermelon (97103) v2	wmbwmbB034
Cla97C01G001180	Silver-seed gourd	carwmbB1094
Cla97C01G001180	Silver-seed gourd	carwmbB0739
Cla97C01G001180	Cucurbita maxima (Rimu)	cmawmbB288
Cla97C01G001180	Cucurbita maxima (Rimu)	cmawmbB605
Cla97C01G001180	Cucurbita moschata (Rifu)	cmowmbB270
Cla97C01G001180	Cucurbita moschata (Rifu)	cmowmbB581
Cla97C01G001180	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G001180	Watermelon (97103) v1	wmwmbB235
Cla97C01G001180	Wax gourd	wgowmbB055
Cla97C01G001180	Wax gourd	wgowmbB167