ClCG01G001140 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G001140
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Protein GRSP-2, isoform a
Location	CG_Chr01 : 974618 .. 977357 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGCCGGCGGCAACGCCGTTAGTGGCGGAAACAGGACATTGGCTAAGGGAAGAAGTGGACGACAGACCGTGGAAATTGGCGGAGCCGCTGTGGCGGCGTGTGGCTCTGGAAGTGGAGGTTGGAGAGGAAGGTCGGTTGGCGGGGGTAGTGGCGGCTCTGGTGACGGCTCTACCGGCGGTTCTGATGATGTTTCCGGCGGGTCCACCTCCCATGCTCTTTCCGCGGAACATGGTGATCGGTAATGTTTGTTTATGACATAAGTTTTGAGGAGCGCAGGGAAATGAATCTGCATCGTCCTTTGAGGATTTGTTTATTCTAGTTTTGGAAGTGGATGAAGTGGTGATTTGGGTCCATTGCCATTATCGCTCTGTAATTTTATTTATTTGTGGGGTTGTTCTTGTGGCTGGGTTTGTCTTATTCTTGGGTTAGTATTTATCATTTGGGATGTGGTTGATGAAAGGGATAGGAAGGTATGGGATGGTTTTGTTGAGGGCTTACCCATTTCCATCCCCAAGAGGTAAGGTTTTTTTTTTTGTGTGTGAAAAAAATCCAAGGATGACGTAGAGGCCGAAATGAAATTGGGCCAATGTATAGAATTGTAAGTGTTTTGGCTTTCTGCTTGCATCATTCTAGTGTGAAATTATTGAAACAATCAATCAAAGCACACTTGGTGGCCCCCGACTCTTGCTCCTTTCACTTTTCACTCTCGCTCTTCTTGATACTTGTTCTCGCCATTCTCGATCTCATTACGTGTCCTCTTCTCGTTCATTTAACATTTCATTTCTTTCTTGTTTTCTCATTTTCACTTTCTTTATCAACCACATAAAATATTTTAATCATTGGTTTTGCCTATTCCCTGAGTTGTCACTTGATGTTTGTCATCCTCTTTAAGCATATAGCCGTTTGGATTTCCCAAGTCTTTCTCAAATACAGTATCACTCTTGATACTCTCGATTGGTATGTAATTTTTCGTTTTCGTTGAATATAGTTTAGGGTAATTTAGGTTTCCGTTTTTGTTCTCACTAGTCATTTTTTAAAAAAAGTGAAACAGAAAAGAGTTTAAGAAGGGAAGCAGATGAGTAGCCAGTAGAGAGAATGGAGTTGGGTTTAGAGTGAAAATCGATGAAATAGTGAGAGCGAGAGCAAGAACTTAGTGGTTGCGAGTAGAGATAATTTTACAAAATTTTGAAATTTGAGCTTGTTTGCTTAGTTTTTAATATGTATTTTTGTTTGTGAGTTTAATTCTGGCTGTTTTTATGTGCAGGACCAAAATGACTTGAGTTTTAAAGATTTCTGCTAATAATCGCTTTCCTGGCCAAGCTACGAGCCTATCATCGCACATCAGGACCGCGAACAAGATTGTCAAAGAAAAACTTACCTCCAGTCAGCTTGACTTGTTCAAAAGGACTGTATTTGGACGGTTTGTGGATATGGATCTGATTTTCAATAGCCCCTTAGTCCATTATATTTTATTACGAGAGGCGAAGGACAAGAGGTCAGATGCTATGGGCTTTGATCTGAATGATATATCGTCACCTTCTCGAATGACAAGTTCTCGTTGGTGACAGGATTGTGGCAGTCACCTACCAAATTGGTTCAGAGGGAAGCGACTGAATCATTACGGACGAAGTATTTCGGAAATGAGTTGATGGTGGACATGCACCCCATTAACTTTGAGGAAATATGCAAGAACGTGAACTTCTACAATGACTTGGACACAGTGAAAGTTACATTGGTTTATTACACGGAGTTGGCAATGATGGGGAAAGACAAGACAAAGAGTGTTATTCACAAATCACTTTTGGACGATGTTGAGGACCTGGAATACTACAACAGTCTCGATTGGGGACATATATTATGGGAGAGGACATTGAAGGGCCTTTAGAATGCACTAGAGGACAAGGTTGATGTGTACAAGAAGAAGGCCAAATTGAATGAGAACTATATTGTAAAGTACAATCTGACTGGATTTCCTCATGCATTCCAGGTATTATCCATTCCGTGTGTTACATGTTTTATAATCTTTTATTAAGTTTTTTACATGTTGACCTAACATGCTATGTTGTTTGTAGGCATGGGCATACAAGATCATATCGTCAGTTGCTGGTAGAGCTGCAATTCGGCCGAACAATGATGCGGTGCCTCGCATCTTGAGATGGTCCTGCTCATATTCACTTCCCTCCAAGTTGTTGCAAAGAGACGTTTTTGACTCCCCTGGGGTTAGAACATACATGAACTCAGTGTATTGCATGTAAACAGGGAATAGGGGAGACTTGATTTTGTGCAATCAACCTTATTAGCTTATGTTTGGTACATGTAGTTAGTGATTTCTCCTGTACTTATTATATTGAACGCGGAGAAGTAGTTCTGAGACACACGGGTTGTTAACGACCCGTATGTGTAATGGACCAAGTCGAGAGGATCCCATCAATGACTGACAACTCAGTGGATAGTGATGGCTCAAAAGATGCTCAAGGTCACCATGATCTCCATGACGAGGATGTTTCACGTCCCCGTTCTGAGCATAAACAAGGTTCACATGCTGAGCACGAGCACAATGATGATTTTGATCCCCATGATGATCATAATGCTGGCAACGATTTCGAACATGTCATGAGGGATCACGCCGACGAGGACCATTTACCAGAGCCTGAAACGATCTCGAAGAGGGGCAAAAGGAAGAGAAAAGCACATGAGGAGCACGAACACGACGGGTTTGCCTACTGCAGAGCTTAG

mRNA sequence

ATGCCAGCCGGCGGCAACGCCGTTAGTGGCGGAAACAGGACATTGGCTAAGGGAAGAAGTGGACGACAGACCGTGGAAATTGGCGGAGCCGCTGTGGCGGCGTGTGGCTCTGGAAGTGGAGGTTGGAGAGGAAGGTCGGTTGGCGGGGGTAGTGGCGGCTCTGGTGACGGCTCTACCGGCGGTTCTGATGATGTTTCCGGCGGGTCCACCTCCCATGCTCTTTCCGCGGAACATGGTTCACATGCTGAGCACGAGCACAATGATGATTTTGATCCCCATGATGATCATAATGCTGGCAACGATTTCGAACATGTCATGAGGGATCACGCCGACGAGGACCATTTACCAGAGCCTGAAACGATCTCGAAGAGGGGCAAAAGGAAGAGAAAAGCACATGAGGAGCACGAACACGACGGGTTTGCCTACTGCAGAGCTTAG

Coding sequence (CDS)

ATGCCAGCCGGCGGCAACGCCGTTAGTGGCGGAAACAGGACATTGGCTAAGGGAAGAAGTGGACGACAGACCGTGGAAATTGGCGGAGCCGCTGTGGCGGCGTGTGGCTCTGGAAGTGGAGGTTGGAGAGGAAGGTCGGTTGGCGGGGGTAGTGGCGGCTCTGGTGACGGCTCTACCGGCGGTTCTGATGATGTTTCCGGCGGGTCCACCTCCCATGCTCTTTCCGCGGAACATGGTTCACATGCTGAGCACGAGCACAATGATGATTTTGATCCCCATGATGATCATAATGCTGGCAACGATTTCGAACATGTCATGAGGGATCACGCCGACGAGGACCATTTACCAGAGCCTGAAACGATCTCGAAGAGGGGCAAAAGGAAGAGAAAAGCACATGAGGAGCACGAACACGACGGGTTTGCCTACTGCAGAGCTTAG

Protein sequence

MPAGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGSDDVSGGSTSHALSAEHGSHAEHEHNDDFDPHDDHNAGNDFEHVMRDHADEDHLPEPETISKRGKRKRKAHEEHEHDGFAYCRA

Homology

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BLAST of ClCG01G001140 vs. TrEMBL
Match: Q3EAC9_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At4g01985 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-06
Identity = 34/67 (50.75%), Postives = 36/67 (53.73%), Query Frame = 1


Query: 3   AGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGR-SVGGGSGGSGDGSTGG 62
           AGG   SGG  T+  G  G      GG  V A G GSGG  G   VGGG+GGSG GS GG
Sbjct: 191 AGGGIGSGGGGTVGAGGRGSGGASGGGGTVGAGGRGSGGASGGVGVGGGAGGSGGGSVGG 250

Query: 63  SDDVSGG 69
               SGG
Sbjct: 251 GGRGSGG 257

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BLAST of ClCG01G001140 vs. TrEMBL
Match: Q3EAC9_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At4g01985 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.9e-02
Identity = 29/71 (40.85%), Postives = 34/71 (47.89%), Query Frame = 1


Query: 3   AGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGS 62
           AGGN  +GG   L  G  G     +GG+   A G   GG  G   GG  GG G GS G S
Sbjct: 264 AGGNVGAGGG--LGGGVGGGVGGGVGGSVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGAS 323

Query: 63  DDVSGGSTSHA 74
              SGG++  A
Sbjct: 324 GGASGGASGGA 332

HSP 2 Score: 45.4 bits (106), Expect = 6.7e-02
Identity = 28/77 (36.36%), Postives = 34/77 (44.16%), Query Frame = 1


Query: 3   AGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGS 62
           A G A  G   ++  G  G     +GG      G G GG  G +VGG  GG G GS GG 
Sbjct: 324 ASGGASGGAGGSVGAG--GGVGGGVGGGVGGGVGGGVGGAVGGAVGGAVGGGGGGSVGGG 383

Query: 63  DDVSGGSTSHALSAEHG 80
              SGG++  A     G
Sbjct: 384 GRGSGGASGGASGGASG 398

HSP 3 Score: 45.1 bits (105), Expect = 8.7e-02
Identity = 25/65 (38.46%), Postives = 32/65 (49.23%), Query Frame = 1


Query: 5   GNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGSDD 64
           G  V GG      G  G      GG +V   G GSGG  G + GG SGG+  G++GG+  
Sbjct: 351 GGGVGGGVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGASGGASGGASGGASGGASGGASG 410

Query: 65  VSGGS 70
             GG+
Sbjct: 411 GVGGA 415

HSP 4 Score: 44.3 bits (103), Expect = 1.5e-01
Identity = 28/81 (34.57%), Postives = 37/81 (45.68%), Query Frame = 1


Query: 3   AGGNAVSGGNRTLAKGRSGRQTVEIGGA---AVAACGSGSGGWRGRSVGGGSGGSGDGST 62
           AGG    G    +  G  G     +GGA   AV   G GS G  GR  GG SGG+  G++
Sbjct: 338 AGGGVGGGVGGGVGGGVGGGVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGASGGASGGAS 397

Query: 63  GGSDDVSGGSTSHALSAEHGS 81
           GG+   + G  S  +    G+
Sbjct: 398 GGASGGASGGASGGVGGAGGA 418

HSP 5 Score: 42.7 bits (99), Expect = 4.3e-01
Identity = 23/66 (34.85%), Postives = 28/66 (42.42%), Query Frame = 1


Query: 5   GNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGSDD 64
           G   SGG     KGR G+     GG      G+G G       GGG G  G G+ G    
Sbjct: 149 GGGASGGVGGGGKGRGGKSGGGAGGGVGGGVGAGGGAGGSVGAGGGIGSGGGGTVGAGGR 208

Query: 65  VSGGST 71
            SGG++
Sbjct: 209 GSGGAS 214

HSP 6 Score: 41.6 bits (96), Expect = 9.6e-01
Identity = 25/66 (37.88%), Postives = 29/66 (43.94%), Query Frame = 1


Query: 3   AGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGS 62
           AGG    GG   +  G  G     +GG      G G  G  G +VGGG GG+G GS G S
Sbjct: 480 AGGGVGVGGGGGIGGGAGGG----VGGGVGGGVGGGVRGAVGGAVGGGVGGAGRGSGGAS 539

Query: 63  DDVSGG 69
                G
Sbjct: 540 GGAGAG 541

HSP 7 Score: 41.6 bits (96), Expect = 9.6e-01
Identity = 26/64 (40.62%), Postives = 29/64 (45.31%), Query Frame = 1


Query: 5   GNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGSDD 64
           G  V G       G  G      GG +V   G GSGG  G + GG SGG+G GS G    
Sbjct: 283 GGGVGGSVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGASGGASGGASGGAG-GSVGAGGG 342

Query: 65  VSGG 69
           V GG
Sbjct: 343 VGGG 345

HSP 8 Score: 41.2 bits (95), Expect = 1.3e+00
Identity = 29/70 (41.43%), Postives = 34/70 (48.57%), Query Frame = 1


Query: 4   GGNAVSGGNRTL--AKGRSGRQTVEIGGAAVAA---CGSGSGGWRGRSVGGGSGGSGDGS 63
           GG +V GG R    A G +G      GG  V      G G+GG  G  VGGG GG   G+
Sbjct: 456 GGGSVGGGGRGSGGAGGGTGGSVGAGGGVGVGGGGGIGGGAGGGVGGGVGGGVGGGVRGA 515

Query: 64  TGGSDDVSGG 69
            GG+  V GG
Sbjct: 516 VGGA--VGGG 523

HSP 9 Score: 38.1 bits (87), Expect = 1.1e+01
Identity = 27/69 (39.13%), Postives = 32/69 (46.38%), Query Frame = 1


Query: 5   GNAVSGGNRTLAKGRSGRQTVEIG-GAAVAACGSGSGGWRGRSVGGGS----GGSGDGST 64
           G  V GG R    G  G      G G+  A+ G+G+GG  G  VGGG+    G    GST
Sbjct: 505 GGGVGGGVRGAVGGAVGGGVGGAGRGSGGASGGAGAGGGAGGGVGGGANVGVGVGAGGST 564

Query: 65  GGSDDVSGG 69
           GG     GG
Sbjct: 565 GGGAAGGGG 573

HSP 10 Score: 37.4 bits (85), Expect = 1.8e+01
Identity = 30/87 (34.48%), Postives = 35/87 (40.23%), Query Frame = 1


Query: 5   GNAVSGGNRTLAKGRSGRQT----------VEIGGAAVAACGSGSG--GWRGRSVGGGSG 64
           G   SGG     KGR G+            V  GG A  + G+G G     G +VG G  
Sbjct: 149 GGGASGGVGGGGKGRGGKSGGGAGGGVGGGVGAGGGAGGSVGAGGGIGSGGGGTVGAGGR 208

Query: 65  GSGDGSTGGSDDVSGGSTSHALSAEHG 80
           GSG  S GG    +GG  S   S   G
Sbjct: 209 GSGGASGGGGTVGAGGRGSGGASGGVG 235

HSP 11 Score: 35.0 bits (79), Expect = 9.0e+01
Identity = 28/79 (35.44%), Postives = 35/79 (44.30%), Query Frame = 1


Query: 3   AGGNAVSGGN--RTLAKGRSGRQTVEIGGAAVAACGSGS-----GGWRGR-SVGGGSGGS 62
           AGG+  +GG     +  G  G     +GGA   A G G      GG RG    GGG+GGS
Sbjct: 418 AGGSVGAGGGVGGGVGGGVGGGVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGAGGGTGGS 477

Query: 63  ----GDGSTGGSDDVSGGS 70
               G    GG   + GG+
Sbjct: 478 VGAGGGVGVGGGGGIGGGA 496

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BLAST of ClCG01G001140 vs. TAIR10
Match: AT4G01985.1 (AT4G01985.1 unknown protein)

HSP 1 Score: 58.2 bits (139), Expect = 5.0e-09
Identity = 34/67 (50.75%), Postives = 34/67 (50.75%), Query Frame = 1


Query: 3   AGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGR-SVGGGSGGSGDGSTGG 62
           AGG   SGG  T+  G  G      GG  V A G GSGG  G   VGGG+GGSG GS GG
Sbjct: 191 AGGGIGSGGGGTVGAGGRGSGGASGGGGTVGAGGRGSGGASGGVGVGGGAGGSGGGSVGG 250

Query: 63  SDDVSGG 69
               SGG
Sbjct: 251 GGRGSGG 257

HSP 2 Score: 46.2 bits (108), Expect = 2.0e-05
Identity = 29/71 (40.85%), Postives = 33/71 (46.48%), Query Frame = 1


Query: 3   AGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGS 62
           AGGN  +GG   L  G  G     +GG+   A G   GG  G   GG  GG G GS G S
Sbjct: 264 AGGNVGAGGG--LGGGVGGGVGGGVGGSVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGAS 323

Query: 63  DDVSGGSTSHA 74
              SGG++  A
Sbjct: 324 GGASGGASGGA 332

HSP 3 Score: 45.4 bits (106), Expect = 3.4e-05
Identity = 28/77 (36.36%), Postives = 32/77 (41.56%), Query Frame = 1


Query: 3   AGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGS 62
           A G A  G   ++  G  G     +GG      G G GG  G +VGG  GG G GS GG 
Sbjct: 324 ASGGASGGAGGSVGAG--GGVGGGVGGGVGGGVGGGVGGAVGGAVGGAVGGGGGGSVGGG 383

Query: 63  DDVSGGSTSHALSAEHG 80
              SGG++  A     G
Sbjct: 384 GRGSGGASGGASGGASG 398

HSP 4 Score: 45.1 bits (105), Expect = 4.4e-05
Identity = 25/65 (38.46%), Postives = 30/65 (46.15%), Query Frame = 1


Query: 5   GNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGSDD 64
           G  V GG      G  G      GG +V   G GSGG  G + GG SGG+  G++GG+  
Sbjct: 351 GGGVGGGVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGASGGASGGASGGASGGASGGASG 410

Query: 65  VSGGS 70
             GG+
Sbjct: 411 GVGGA 415

HSP 5 Score: 44.3 bits (103), Expect = 7.5e-05
Identity = 28/81 (34.57%), Postives = 35/81 (43.21%), Query Frame = 1


Query: 3   AGGNAVSGGNRTLAKGRSGRQTVEIGGA---AVAACGSGSGGWRGRSVGGGSGGSGDGST 62
           AGG    G    +  G  G     +GGA   AV   G GS G  GR  GG SGG+  G++
Sbjct: 338 AGGGVGGGVGGGVGGGVGGGVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGASGGASGGAS 397

Query: 63  GGSDDVSGGSTSHALSAEHGS 81
           GG+   + G  S  +    G+
Sbjct: 398 GGASGGASGGASGGVGGAGGA 418

HSP 6 Score: 42.7 bits (99), Expect = 2.2e-04
Identity = 23/66 (34.85%), Postives = 26/66 (39.39%), Query Frame = 1


Query: 5   GNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGSDD 64
           G   SGG     KGR G+     GG      G+G G       GGG G  G G+ G    
Sbjct: 149 GGGASGGVGGGGKGRGGKSGGGAGGGVGGGVGAGGGAGGSVGAGGGIGSGGGGTVGAGGR 208

Query: 65  VSGGST 71
            SGG++
Sbjct: 209 GSGGAS 214

HSP 7 Score: 41.6 bits (96), Expect = 4.9e-04
Identity = 25/66 (37.88%), Postives = 27/66 (40.91%), Query Frame = 1


Query: 3   AGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGS 62
           AGG    GG   +  G  G     +GG      G G  G  G +VGGG GG+G GS G S
Sbjct: 480 AGGGVGVGGGGGIGGGAGGG----VGGGVGGGVGGGVRGAVGGAVGGGVGGAGRGSGGAS 539

Query: 63  DDVSGG 69
                G
Sbjct: 540 GGAGAG 541

HSP 8 Score: 41.6 bits (96), Expect = 4.9e-04
Identity = 26/64 (40.62%), Postives = 27/64 (42.19%), Query Frame = 1


Query: 5   GNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTGGSDD 64
           G  V G       G  G      GG +V   G GSGG  G + GG SGG+G GS G    
Sbjct: 283 GGGVGGSVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGASGGASGGASGGAG-GSVGAGGG 342

Query: 65  VSGG 69
           V GG
Sbjct: 343 VGGG 345

HSP 9 Score: 41.2 bits (95), Expect = 6.4e-04
Identity = 29/70 (41.43%), Postives = 32/70 (45.71%), Query Frame = 1


Query: 4   GGNAVSGGNRTL--AKGRSGRQTVEIGGAAVAA---CGSGSGGWRGRSVGGGSGGSGDGS 63
           GG +V GG R    A G +G      GG  V      G G+GG  G  VGGG GG   G+
Sbjct: 456 GGGSVGGGGRGSGGAGGGTGGSVGAGGGVGVGGGGGIGGGAGGGVGGGVGGGVGGGVRGA 515

Query: 64  TGGSDDVSGG 69
            GG+  V GG
Sbjct: 516 VGGA--VGGG 523

HSP 10 Score: 38.1 bits (87), Expect = 5.4e-03
Identity = 27/69 (39.13%), Postives = 30/69 (43.48%), Query Frame = 1


Query: 5   GNAVSGGNRTLAKGRSGRQTVEIG-GAAVAACGSGSGGWRGRSVGGGS----GGSGDGST 64
           G  V GG R    G  G      G G+  A+ G+G+GG  G  VGGG+    G    GST
Sbjct: 505 GGGVGGGVRGAVGGAVGGGVGGAGRGSGGASGGAGAGGGAGGGVGGGANVGVGVGAGGST 564

Query: 65  GGSDDVSGG 69
           GG     GG
Sbjct: 565 GGGAAGGGG 573

HSP 11 Score: 37.4 bits (85), Expect = 9.2e-03
Identity = 30/87 (34.48%), Postives = 33/87 (37.93%), Query Frame = 1


Query: 5   GNAVSGGNRTLAKGRSGRQT----------VEIGGAAVAACGSGSG--GWRGRSVGGGSG 64
           G   SGG     KGR G+            V  GG A  + G+G G     G +VG G  
Sbjct: 149 GGGASGGVGGGGKGRGGKSGGGAGGGVGGGVGAGGGAGGSVGAGGGIGSGGGGTVGAGGR 208

Query: 65  GSGDGSTGGSDDVSGGSTSHALSAEHG 80
           GSG  S GG    +GG  S   S   G
Sbjct: 209 GSGGASGGGGTVGAGGRGSGGASGGVG 235

HSP 12 Score: 35.0 bits (79), Expect = 4.6e-02
Identity = 28/79 (35.44%), Postives = 33/79 (41.77%), Query Frame = 1


Query: 3   AGGNAVSGGN--RTLAKGRSGRQTVEIGGAAVAACGSGS-----GGWRGR-SVGGGSGGS 62
           AGG+  +GG     +  G  G     +GGA   A G G      GG RG    GGG+GGS
Sbjct: 418 AGGSVGAGGGVGGGVGGGVGGGVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGAGGGTGGS 477

Query: 63  ----GDGSTGGSDDVSGGS 70
               G    GG   + GG+
Sbjct: 478 VGAGGGVGVGGGGGIGGGA 496

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BLAST of ClCG01G001140 vs. NCBI nr
Match: gi|778699094|ref|XP_011654657.1| (PREDICTED: uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 3.3e-26
Identity = 63/78 (80.77%), Postives = 67/78 (85.90%), Query Frame = 1


Query: 1  MPAGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTG 60
          MPAGGN+VSGGNR LAKG + RQ VEIGGAA A+CGSGSG  RGRSV GG GGSGDGSTG
Sbjct: 1  MPAGGNSVSGGNRVLAKGSARRQAVEIGGAAGASCGSGSGSRRGRSVCGGIGGSGDGSTG 60

Query: 61 GSDDVSGGSTSHALSAEH 79
          GSDDVSG STSHA +AEH
Sbjct: 61 GSDDVSGRSTSHAFAAEH 78

[Close]

BLAST of ClCG01G001140 vs. NCBI nr
Match: gi|778699094|ref|XP_011654657.1| (PREDICTED: uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11
Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 1


Query: 62  SDDVSGGSTSHALSAEHGSHAEHEHNDDFDPHDDHNAGNDFEHVMRDHADEDHLPEPETI 121
           ++D+S     H      G HA+HE +D+ D H+DH+  N+ E  MRDH  ED LPEPE  
Sbjct: 432 NEDISNPHYEHL----QGPHAKHERSDNCDAHNDHDIDNNSERFMRDHV-EDRLPEPEMS 491

Query: 122 SKRGKRKRKAHEEHEHDGFAYCRA 146
            KR KR+ KAH+EH H+ F+Y ++
Sbjct: 492 MKRCKREGKAHKEHNHNVFSYLKS 510

HSP 2 Score: 126.7 bits (317), Expect = 3.3e-26
Identity = 63/78 (80.77%), Postives = 67/78 (85.90%), Query Frame = 1


Query: 1  MPAGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTG 60
          MPAGGN+VSGGNR LAKG + RQ VEIGGAA A+CGSGSG  RGRSV GG GGSGDGSTG
Sbjct: 1  MPAGGNSVSGGNRVLAKGSARRQAVEIGGAAGASCGSGSGSRRGRSVCGGIGGSGDGSTG 60

Query: 61 GSDDVSGGSTSHALSAEH 79
          GSDDVSG STSHA +AEH
Sbjct: 61 GSDDVSGRSTSHAFAAEH 78

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BLAST of ClCG01G001140 vs. NCBI nr
Match: gi|778699090|ref|XP_011654656.1| (PREDICTED: uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11
Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 1


Query: 62  SDDVSGGSTSHALSAEHGSHAEHEHNDDFDPHDDHNAGNDFEHVMRDHADEDHLPEPETI 121
           ++D+S     H      G HA+HE +D+ D H+DH+  N+ E  MRDH  ED LPEPE  
Sbjct: 434 NEDISNPHYEHL----QGPHAKHERSDNCDAHNDHDIDNNSERFMRDHV-EDRLPEPEMS 493

Query: 122 SKRGKRKRKAHEEHEHDGFAYCRA 146
            KR KR+ KAH+EH H+ F+Y ++
Sbjct: 494 MKRCKREGKAHKEHNHNVFSYLKS 512

HSP 2 Score: 122.9 bits (307), Expect = 4.7e-25
Identity = 61/78 (78.21%), Postives = 66/78 (84.62%), Query Frame = 1


Query: 1  MPAGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTG 60
          MPAGGN+VSGGNR LAKG + R  VEIGGAA A+CGSGSG  RGRSV GG+ GSGDGSTG
Sbjct: 1  MPAGGNSVSGGNRALAKGSARRLAVEIGGAAGASCGSGSGSRRGRSVCGGTSGSGDGSTG 60

Query: 61 GSDDVSGGSTSHALSAEH 79
          GSDDVSG STSHA +AEH
Sbjct: 61 GSDDVSGRSTSHAFTAEH 78

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BLAST of ClCG01G001140 vs. NCBI nr
Match: gi|659074245|ref|XP_008437500.1| (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 1


Query: 62  SDDVSGGSTSHALSAEHGSHAEHEHNDDFDPHDDHNAGNDFEHVMRDHADEDHLPEPETI 121
           ++D+S     H      G HA+HE +D+ DPHD+H+  N+    MRDH  EDHLPEPE  
Sbjct: 435 NEDISNPHYKHL----QGPHAKHERSDNCDPHDNHDIDNNSVRFMRDHV-EDHLPEPEMS 494

Query: 122 SKRGKRKRKAHEEHEHDGFAYCRA 146
            KR KR+ K+ EEH+H+ F++ ++
Sbjct: 495 MKRCKREGKSREEHKHNVFSHLKS 513

HSP 2 Score: 122.9 bits (307), Expect = 4.7e-25
Identity = 61/78 (78.21%), Postives = 66/78 (84.62%), Query Frame = 1


Query: 1  MPAGGNAVSGGNRTLAKGRSGRQTVEIGGAAVAACGSGSGGWRGRSVGGGSGGSGDGSTG 60
          MPAGGN+VSGGNR LAKG + R  VEIGGAA A+CGSGSG  RGRSV GG+ GSGDGSTG
Sbjct: 1  MPAGGNSVSGGNRALAKGSARRLAVEIGGAAGASCGSGSGSRRGRSVCGGTSGSGDGSTG 60

Query: 61 GSDDVSGGSTSHALSAEH 79
          GSDDVSG STSHA +AEH
Sbjct: 61 GSDDVSGRSTSHAFTAEH 78

[Close]

BLAST of ClCG01G001140 vs. NCBI nr
Match: gi|659074247|ref|XP_008437501.1| (PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 1


Query: 62  SDDVSGGSTSHALSAEHGSHAEHEHNDDFDPHDDHNAGNDFEHVMRDHADEDHLPEPETI 121
           ++D+S     H      G HA+HE +D+ DPHD+H+  N+    MRDH  EDHLPEPE  
Sbjct: 433 NEDISNPHYKHL----QGPHAKHERSDNCDPHDNHDIDNNSVRFMRDHV-EDHLPEPEMS 492

Query: 122 SKRGKRKRKAHEEHEHDGFAYCRA 146
            KR KR+ K+ EEH+H+ F++ ++
Sbjct: 493 MKRCKREGKSREEHKHNVFSHLKS 511

The following BLAST results are available for this feature:

BLAST of ClCG01G001140 vs. TrEMBL


Match Name	E-value	Identity	Description
Q3EAC9_ARATH	9.9e-06	50.75	Uncharacterized protein OS=Arabidopsis thaliana GN=At4g01985 PE=4 SV=1	[more]
Q3EAC9_ARATH	3.9e-02	40.85	Uncharacterized protein OS=Arabidopsis thaliana GN=At4g01985 PE=4 SV=1	[more]

BLAST of ClCG01G001140 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01985.1	5.0e-09	50.75	unknown protein	[more]

BLAST of ClCG01G001140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778699094\|ref\|XP_011654657.1\|	3.3e-26	80.77	PREDICTED: uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus]	[more]
gi\|778699094\|ref\|XP_011654657.1\|	1.0e-11	45.24	PREDICTED: uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus]	[more]
gi\|778699090\|ref\|XP_011654656.1\|	1.0e-11	45.24	PREDICTED: uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus]	[more]
gi\|659074245\|ref\|XP_008437500.1\|	1.7e-11	44.05	PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo]	[more]
gi\|659074247\|ref\|XP_008437501.1\|	1.7e-11	44.05	PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G001140.1	ClCG01G001140.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G001140	Cla97C01G001180	Watermelon (97103) v2	wcgwmbB089
ClCG01G001140	CsaV3_5G001270	Cucumber (Chinese Long) v3	cucwcgB385

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G001140	Silver-seed gourd	carwcgB0686
ClCG01G001140	Silver-seed gourd	carwcgB1009
ClCG01G001140	Cucumber (Chinese Long) v3	cucwcgB301
ClCG01G001140	Watermelon (97103) v2	wcgwmbB118
ClCG01G001140	Wax gourd	wcgwgoB192
ClCG01G001140	Wax gourd	wcgwgoB209
ClCG01G001140	Watermelon (Charleston Gray)	wcgwcgB109
ClCG01G001140	Cucurbita moschata (Rifu)	cmowcgB247
ClCG01G001140	Cucumber (Gy14) v1	cgywcgB148
ClCG01G001140	Cucumber (Gy14) v1	cgywcgB351
ClCG01G001140	Cucurbita maxima (Rimu)	cmawcgB259
ClCG01G001140	Cucurbita maxima (Rimu)	cmawcgB522
ClCG01G001140	Cucurbita moschata (Rifu)	cmowcgB521
ClCG01G001140	Wild cucumber (PI 183967)	cpiwcgB302
ClCG01G001140	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G001140	Cucumber (Chinese Long) v2	cuwcgB291
ClCG01G001140	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G001140	Melon (DHL92) v3.5.1	mewcgB018
ClCG01G001140	Melon (DHL92) v3.5.1	mewcgB468
ClCG01G001140	Watermelon (97103) v1	wcgwmB142
ClCG01G001140	Cucurbita pepo (Zucchini)	cpewcgB009
ClCG01G001140	Cucurbita pepo (Zucchini)	cpewcgB203
ClCG01G001140	Cucurbita pepo (Zucchini)	cpewcgB636
ClCG01G001140	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G001140	Cucumber (Gy14) v2	cgybwcgB268
ClCG01G001140	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G001140	Melon (DHL92) v3.6.1	medwcgB016
ClCG01G001140	Melon (DHL92) v3.6.1	medwcgB460