Csa5G141180 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGACTAGAATGACTCGAGGTTTGAAGATTTCTCCTAATAATCGCTTTCCGGGTCAAGCTTCGAGCATGTCGTCGCACATTGGGACAGCAAACAAGATTGTCAAAGAGAAGCTTACCCCCAAGCAACTGGACTTGTTCAAAAGGACTGTATTTGGACGATTTGTGGATATGGATCTGGTTTTCAGCAGCCCATTAGTCCATCATATTTTATTACGAGAGGTGAAGGACGAGAGGCCAGATGCTATGAGCTTCAATCTGAATGGTATTATCGCCACCTTCTCCAAAGAAGAGTTCTTGTTGGTGACAGGATTATGGCCGTCACCTACCAAACCGGTTCCAAGGGTTGAAGCCACTAAATCACTAGGAACAAAGTATTTCGGCAATGAGTTGGTGGTGGACATGAACCCCCTTACCTTTGAGGAAAGATACAAGAATTTGAACTTCTACGATGACTTGGACGCAGTGAAGGTTACATTGGTTTATTACACTGAGTTGGCAATGATGGGGAAAGACAGGACAAAGAGTATAATCAACAAATCACTATTGGACGATGTTGAGGACTTGAAATACTACAATAGTCTCGATTGGGGACATATATTATGGGAGAAAACGTTGAGGGGCCTTCAAAATGCACTAAAGAACAAGGTTGATATGTACAAAAAAAAGGTCAAATTGAATAAGAACTATAATGTAAAGTATAGCCTGCCTGGTTTTCCTCATGCATTTCAGGTATTATCTATTCCATGTGTTACATGTTATCTTTTATTACGTTTCTTAGATGTTGGACTAATAGTTTATGTTGTTTGTAGGTGTGGGCATACGAAATCATATCGTCAATTGCTGGTAAAGCTGTTACTCGACTGAACAATGAGGCGGTGCCTCGCATCTTGAGATGGTCATGCTCGTATTCACTTCCTTCCAAGTTATTGCAGAGAGACGTTTTCAACTCTATGAGGGTTAGAACATACACAAACCCCGTGTCTTGCATGTAAGAGACTCAATTTTGTGGAACTAACCTTATTAGCTTATGTTTGGTTTATGTAGATAGTGATTTCTCCTACACTTATTATGTCGGATGCGGAAAAGCAATTTAGAGACAGTGAGGTTGATGAACGACCCATATATGTAGTAGACCAAGCCAAGAGGGCTCCATCAGTGATTGACGTCTCTGAGGATAGTGATGGCCCAAAAGATGCTCAGGGTCACTTCGATGACCATGATCTCCACAACGAGGATATTTCAAATCCCCATTACGAGCATCTGCAGGGTCCACATGCTAAGCATGAGCGCAGTGACAACTGCGATGCCCACAATGACCATGACATTGACAACAATTCCGAACGTTTCATGAGGGATCATGTGGAGGATCGTCTACCAGAGCCTGAAATGAGCATGAAGAGGTGCAAAAGGGAAGGAAAAGCACATAAGGAGCACAACCACAACGTGTTCTCCTATCTGAAAAGCTTAGATGGTCGAGTGTCAAGGGTCGAGGACACATTGAAGGAGATGAAGTCGGACTTGCAGACCATTACTTCTCTATTGCACTCGTATTGTAAGGTATGTTTATTGGTGGCATGTTTTCATAATTGTTTCGGCTTGAAAGTGAAGTAACAAAATTTTCTTATTACGTAGAGCAAGAACGTGTTTAATGATAAGAATGGTGCTTGCGATTTGGATTCCAGGCATCCTGAACCCACATCTCTCACAGCTCCTTCACCTCACATCGAAACTACTACTACTACTGGGTTGGATGATGAAAGGGCCATTAGAACAGCAGAGTGTGAAATTGTTCAAGACATGGAGCTTCGTAAATGGGGTTTCAAGTTCACACTTGCTTAAGTATATACTAAACAATCTTAACTTGTATTTCACTCGTAGTTTTTGATTTGTACAAAAGGCACCAGGTTAGATTGTAAATTGGGGATGGAATTTTTGG ATGACTCGAGGTTTGAAGATTTCTCCTAATAATCGCTTTCCGGGTCAAGCTTCGAGCATGTCGTCGCACATTGGGACAGCAAACAAGATTGTCAAAGAGAAGCTTACCCCCAAGCAACTGGACTTGTTCAAAAGGACTGTATTTGGACGATTTGTGGATATGGATCTGGTTTTCAGCAGCCCATTAGTCCATCATATTTTATTACGAGAGGTGAAGGACGAGAGGCCAGATGCTATGAGCTTCAATCTGAATGGTATTATCGCCACCTTCTCCAAAGAAGAGTTCTTGTTGGTGACAGGATTATGGCCGTCACCTACCAAACCGGTTCCAAGGGTTGAAGCCACTAAATCACTAGGAACAAAGTATTTCGGCAATGAGTTGGTGGTGGACATGAACCCCCTTACCTTTGAGGAAAGATACAAGAATTTGAACTTCTACGATGACTTGGACGCAGTGAAGGTTACATTGGTTTATTACACTGAGTTGGCAATGATGGGGAAAGACAGGACAAAGAGTATAATCAACAAATCACTATTGGACGATGTTGAGGACTTGAAATACTACAATAGTCTCGATTGGGGACATATATTATGGGAGAAAACGTTGAGGGGCCTTCAAAATGCACTAAAGAACAAGGTTGATATGTACAAAAAAAAGGTCAAATTGAATAAGAACTATAATGTAAAGTATAGCCTGCCTGGTTTTCCTCATGCATTTCAGGTGTGGGCATACGAAATCATATCGTCAATTGCTGGTAAAGCTGTTACTCGACTGAACAATGAGGCGGTGCCTCGCATCTTGAGATGGTCATGCTCGTATTCACTTCCTTCCAAGTTATTGCAGAGAGACGTTTTCAACTCTATGAGGATAGTGATTTCTCCTACACTTATTATGTCGGATGCGGAAAAGCAATTTAGAGACAGTGAGGTTGATGAACGACCCATATATGTAGTAGACCAAGCCAAGAGGGCTCCATCAGTGATTGACGTCTCTGAGGATAGTGATGGCCCAAAAGATGCTCAGGGTCACTTCGATGACCATGATCTCCACAACGAGGATATTTCAAATCCCCATTACGAGCATCTGCAGGGTCCACATGCTAAGCATGAGCGCAGTGACAACTGCGATGCCCACAATGACCATGACATTGACAACAATTCCGAACGTTTCATGAGGGATCATGTGGAGGATCGTCTACCAGAGCCTGAAATGAGCATGAAGAGGTGCAAAAGGGAAGGAAAAGCACATAAGGAGCACAACCACAACGTGTTCTCCTATCTGAAAAGCTTAGATGGTCGAGTGTCAAGGGTCGAGGACACATTGAAGGAGATGAAGTCGGACTTGCAGACCATTACTTCTCTATTGCACTCGTATTGTAAGAGCAAGAACGTGTTTAATGATAAGAATGGTGCTTGCGATTTGGATTCCAGGCATCCTGAACCCACATCTCTCACAGCTCCTTCACCTCACATCGAAACTACTACTACTACTGGGTTGGATGATGAAAGGGCCATTAGAACAGCAGAGTGTGAAATTGTTCAAGACATGGAGCTTCGTAAATGGGGTTTCAAGTTCACACTTGCTTAA ATGACTCGAGGTTTGAAGATTTCTCCTAATAATCGCTTTCCGGGTCAAGCTTCGAGCATGTCGTCGCACATTGGGACAGCAAACAAGATTGTCAAAGAGAAGCTTACCCCCAAGCAACTGGACTTGTTCAAAAGGACTGTATTTGGACGATTTGTGGATATGGATCTGGTTTTCAGCAGCCCATTAGTCCATCATATTTTATTACGAGAGGTGAAGGACGAGAGGCCAGATGCTATGAGCTTCAATCTGAATGGTATTATCGCCACCTTCTCCAAAGAAGAGTTCTTGTTGGTGACAGGATTATGGCCGTCACCTACCAAACCGGTTCCAAGGGTTGAAGCCACTAAATCACTAGGAACAAAGTATTTCGGCAATGAGTTGGTGGTGGACATGAACCCCCTTACCTTTGAGGAAAGATACAAGAATTTGAACTTCTACGATGACTTGGACGCAGTGAAGGTTACATTGGTTTATTACACTGAGTTGGCAATGATGGGGAAAGACAGGACAAAGAGTATAATCAACAAATCACTATTGGACGATGTTGAGGACTTGAAATACTACAATAGTCTCGATTGGGGACATATATTATGGGAGAAAACGTTGAGGGGCCTTCAAAATGCACTAAAGAACAAGGTTGATATGTACAAAAAAAAGGTCAAATTGAATAAGAACTATAATGTAAAGTATAGCCTGCCTGGTTTTCCTCATGCATTTCAGGTGTGGGCATACGAAATCATATCGTCAATTGCTGGTAAAGCTGTTACTCGACTGAACAATGAGGCGGTGCCTCGCATCTTGAGATGGTCATGCTCGTATTCACTTCCTTCCAAGTTATTGCAGAGAGACGTTTTCAACTCTATGAGGATAGTGATTTCTCCTACACTTATTATGTCGGATGCGGAAAAGCAATTTAGAGACAGTGAGGTTGATGAACGACCCATATATGTAGTAGACCAAGCCAAGAGGGCTCCATCAGTGATTGACGTCTCTGAGGATAGTGATGGCCCAAAAGATGCTCAGGGTCACTTCGATGACCATGATCTCCACAACGAGGATATTTCAAATCCCCATTACGAGCATCTGCAGGGTCCACATGCTAAGCATGAGCGCAGTGACAACTGCGATGCCCACAATGACCATGACATTGACAACAATTCCGAACGTTTCATGAGGGATCATGTGGAGGATCGTCTACCAGAGCCTGAAATGAGCATGAAGAGGTGCAAAAGGGAAGGAAAAGCACATAAGGAGCACAACCACAACGTGTTCTCCTATCTGAAAAGCTTAGATGGTCGAGTGTCAAGGGTCGAGGACACATTGAAGGAGATGAAGTCGGACTTGCAGACCATTACTTCTCTATTGCACTCGTATTGTAAGAGCAAGAACGTGTTTAATGATAAGAATGGTGCTTGCGATTTGGATTCCAGGCATCCTGAACCCACATCTCTCACAGCTCCTTCACCTCACATCGAAACTACTACTACTACTGGGTTGGATGATGAAAGGGCCATTAGAACAGCAGAGTGTGAAATTGTTCAAGACATGGAGCTTCGTAAATGGGGTTTCAAGTTCACACTTGCTTAA MTRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSSPLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPTKPVPRVEATKSLGTKYFGNELVVDMNPLTFEERYKNLNFYDDLDAVKVTLVYYTELAMMGKDRTKSIINKSLLDDVEDLKYYNSLDWGHILWEKTLRGLQNALKNKVDMYKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSLPSKLLQRDVFNSMRIVISPTLIMSDAEKQFRDSEVDERPIYVVDQAKRAPSVIDVSEDSDGPKDAQGHFDDHDLHNEDISNPHYEHLQGPHAKHERSDNCDAHNDHDIDNNSERFMRDHVEDRLPEPEMSMKRCKREGKAHKEHNHNVFSYLKSLDGRVSRVEDTLKEMKSDLQTITSLLHSYCKSKNVFNDKNGACDLDSRHPEPTSLTAPSPHIETTTTTGLDDERAIRTAECEIVQDMELRKWGFKFTLA*
BLAST of Csa5G141180 vs. TrEMBL
Match: A0A0A0KM59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141180 PE=4 SV=1) HSP 1 Score: 1078.9 bits (2789), Expect = 0.0e+00 Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 1
BLAST of Csa5G141180 vs. TrEMBL
Match: Q5GIS9_CUCME (Ulp1 peptidase-like OS=Cucumis melo PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 5.7e-35 Identity = 91/238 (38.24%), Postives = 143/238 (60.08%), Query Frame = 1
BLAST of Csa5G141180 vs. TrEMBL
Match: V4UD40_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017905mg PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.9e-30 Identity = 99/305 (32.46%), Postives = 165/305 (54.10%), Query Frame = 1
BLAST of Csa5G141180 vs. TrEMBL
Match: A0A067E3Z8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012730mg PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 3.3e-30 Identity = 99/305 (32.46%), Postives = 166/305 (54.43%), Query Frame = 1
BLAST of Csa5G141180 vs. TrEMBL
Match: A0A067DWM1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012730mg PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 3.3e-30 Identity = 99/305 (32.46%), Postives = 166/305 (54.43%), Query Frame = 1
BLAST of Csa5G141180 vs. NCBI nr
Match: gi|778699090|ref|XP_011654656.1| (PREDICTED: uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus]) HSP 1 Score: 1078.9 bits (2789), Expect = 0.0e+00 Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 1
BLAST of Csa5G141180 vs. NCBI nr
Match: gi|700194767|gb|KGN49944.1| (hypothetical protein Csa_5G141180 [Cucumis sativus]) HSP 1 Score: 1078.9 bits (2789), Expect = 0.0e+00 Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 1
BLAST of Csa5G141180 vs. NCBI nr
Match: gi|778699094|ref|XP_011654657.1| (PREDICTED: uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus]) HSP 1 Score: 1078.9 bits (2789), Expect = 0.0e+00 Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 1
BLAST of Csa5G141180 vs. NCBI nr
Match: gi|659074247|ref|XP_008437501.1| (PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo]) HSP 1 Score: 1011.9 bits (2615), Expect = 4.1e-292 Identity = 490/529 (92.63%), Postives = 514/529 (97.16%), Query Frame = 1
BLAST of Csa5G141180 vs. NCBI nr
Match: gi|659074245|ref|XP_008437500.1| (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo]) HSP 1 Score: 1011.9 bits (2615), Expect = 4.1e-292 Identity = 490/529 (92.63%), Postives = 514/529 (97.16%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|