Cla021590 (gene) Watermelon (97103) v1

Overview
NameCla021590
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEarly light-induced protein 7 (AHRD V1 ***- B2BJD6_RHOCT)
LocationChr5 : 4479171 .. 4479949 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTTCTGCTGTGATGCAATCCATTCCGGCAAGCTCGGCTACTCGAGGTGTCCACAAGACACCAACGAATCGCCTTCTCCCGGCGGCGGTTCGACCGTGCTCCAGGAGCACAGCCTCATTTCGAGTGAGATGCACGGCGGAGGTATTCCCTTGGCTGTTCCATTTTCCTTGTGATAGATTGCACTTCTACTTTTGTGATCGAATTATCTAGGGCTTTAATCGTGGAGTAATCTGTATTTCTGCTTTGATTTTCAGGAGGATCAGAGAGAACGAGTGATTCCTACATCGATCCCATCGTCGTCTCCCAAACCAGAGCCGTCTCCCTCGTCACCACCAAAGGTAAGTAAACCTGCAACATCACTGGCTGTTTCTCGATGAACGGATCAAAACGAGATAGATGGTTAATTTGAGATCCGGTTATTTCCGCAGGTGAGTACGAATTTCACAGACATTTTGGCGTTCAGCGGGCCAGGGCCAGAGAGGATCAACGGGCGGCTTGCAATGATCGGATTCGTGGCTGCCCTAGCGGTTGAACTATCGAAGGGGCAGGACGTGTTCGAGCAAATAGCAAACGGAGGGATCCCATGGTTTGTGGGAACGAGCGTGGTTCTGACATTGGCATCGTTGATTCCATTGTTTAGAGGAGTAAGCGCTGAGTCAAAGTCGAAGGGGATTATGAGTTCGAACGCGGAGCTTTGGAATGGGAGGTTTGCGATGTTGGGGCTTGTTGCTTTGGCCTTCACTGAATATGTTAAAGGTGGAAGCCTTGTGTAA

mRNA sequence

ATGGCCGCTTCTGCTGTGATGCAATCCATTCCGGCAAGCTCGGCTACTCGAGGTGTCCACAAGACACCAACGAATCGCCTTCTCCCGGCGGCGGTTCGACCGTGCTCCAGGAGCACAGCCTCATTTCGAGTGAGATGCACGGCGGAGGAGGATCAGAGAGAACGAGTGATTCCTACATCGATCCCATCGTCGTCTCCCAAACCAGAGCCGTCTCCCTCGTCACCACCAAAGGTGAGTACGAATTTCACAGACATTTTGGCGTTCAGCGGGCCAGGGCCAGAGAGGATCAACGGGCGGCTTGCAATGATCGGATTCGTGGCTGCCCTAGCGGTTGAACTATCGAAGGGGCAGGACGTGTTCGAGCAAATAGCAAACGGAGGGATCCCATGGTTTGTGGGAACGAGCGTGGTTCTGACATTGGCATCGTTGATTCCATTGTTTAGAGGAGTAAGCGCTGAGTCAAAGTCGAAGGGGATTATGAGTTCGAACGCGGAGCTTTGGAATGGGAGGTTTGCGATGTTGGGGCTTGTTGCTTTGGCCTTCACTGAATATGTTAAAGGTGGAAGCCTTGTGTAA

Coding sequence (CDS)

ATGGCCGCTTCTGCTGTGATGCAATCCATTCCGGCAAGCTCGGCTACTCGAGGTGTCCACAAGACACCAACGAATCGCCTTCTCCCGGCGGCGGTTCGACCGTGCTCCAGGAGCACAGCCTCATTTCGAGTGAGATGCACGGCGGAGGAGGATCAGAGAGAACGAGTGATTCCTACATCGATCCCATCGTCGTCTCCCAAACCAGAGCCGTCTCCCTCGTCACCACCAAAGGTGAGTACGAATTTCACAGACATTTTGGCGTTCAGCGGGCCAGGGCCAGAGAGGATCAACGGGCGGCTTGCAATGATCGGATTCGTGGCTGCCCTAGCGGTTGAACTATCGAAGGGGCAGGACGTGTTCGAGCAAATAGCAAACGGAGGGATCCCATGGTTTGTGGGAACGAGCGTGGTTCTGACATTGGCATCGTTGATTCCATTGTTTAGAGGAGTAAGCGCTGAGTCAAAGTCGAAGGGGATTATGAGTTCGAACGCGGAGCTTTGGAATGGGAGGTTTGCGATGTTGGGGCTTGTTGCTTTGGCCTTCACTGAATATGTTAAAGGTGGAAGCCTTGTGTAA

Protein sequence

MAASAVMQSIPASSATRGVHKTPTNRLLPAAVRPCSRSTASFRVRCTAEEDQRERVIPTSIPSSSPKPEPSPSSPPKVSTNFTDILAFSGPGPERINGRLAMIGFVAALAVELSKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAMLGLVALAFTEYVKGGSLV
Homology
[Close]
BLAST of Cla021590 vs. Swiss-Prot
Match: ELIP1_ARATH (Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana GN=ELIP1 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.7e-54
Identity = 116/194 (59.79%), Postives = 136/194 (70.10%), Query Frame = 1 

Query: 3   ASAVMQSIPASSATRGVHKTPTNRLLPAAVRPCSRSTASFRVRCTAE----EDQRERVIP 62
           AS  MQS+ A   T    K  TN+L  A   P  +      VRC AE     +       
Sbjct: 4   ASFNMQSVFAGGLT--TRKINTNKLFSAGSFPNLKRNYPVGVRCMAEGGPTNEDSSPAPS 63

Query: 63  TSIPSSSPK-PEPSPSSPPKVSTNFTDILAFSGPGPERINGRLAMIGFVAALAVELSKGQ 122
           TS     PK P P P   PKVST F+D+LAFSGP PERINGRLAM+GFVAALAVELSKG+
Sbjct: 64  TSAAQPLPKSPSPPPPMKPKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELSKGE 123

Query: 123 DVFEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAMLGLV 182
           +V  QI++GG+ WF+GT+ +LTLASL+PLF+G+S ESKSKGIM+S+AELWNGRFAMLGLV
Sbjct: 124 NVLAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLGLV 183

Query: 183 ALAFTEYVKGGSLV 192
           ALAFTE+VKGG+LV
Sbjct: 184 ALAFTEFVKGGTLV 195

[Close]
BLAST of Cla021590 vs. Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-53
Identity = 112/197 (56.85%), Postives = 145/197 (73.60%), Query Frame = 1 

Query: 1   MAASAVMQSIPASSATRGVHKTPTNRL--LPAAVRPCSRSTASFRVRCTAEEDQRER--- 60
           MA S+  QSI ++S T    ++  N+   +P+   P  R   S +VR  AE + +E+   
Sbjct: 1   MAVSSC-QSIMSNSMTNISSRSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKV 60

Query: 61  -VIPTSIPSSSPKPEPSPSSPPKVSTNFTDILAFSGPGPERINGRLAMIGFVAALAVELS 120
            V PT+  +S+P P+P+ + PPK+ST F+D++AFSGP PERINGRLAMIGFVAA+ VE++
Sbjct: 61  AVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIA 120

Query: 121 KGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAML 180
           KGQ + EQ++ GG+ WF+GTSV+L+LASLIP F+GVS ESKSK IMSS+AE WNGR AML
Sbjct: 121 KGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAML 180

Query: 181 GLVALAFTEYVKGGSLV 192
           GLVALAFTE+VKG SLV
Sbjct: 181 GLVALAFTEFVKGTSLV 196

[Close]
BLAST of Cla021590 vs. Swiss-Prot
Match: ELIP2_ARATH (Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana GN=ELIP2 PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 8.6e-51
Identity = 110/199 (55.28%), Postives = 141/199 (70.85%), Query Frame = 1 

Query: 3   ASAVMQSIPASSA----TRGVHKTPTNRLLPAAVRPCSRSTASFRVRCTAEED--QRERV 62
           AS  MQS+ A+ +    TR +  T  N+L    + P         VRC A+ D  + +  
Sbjct: 4   ASFNMQSVFAAPSGVLTTRNIRNT--NQLFFKRIAPVG-------VRCMAQGDPIKEDPS 63

Query: 63  IPTS----IPSSSPKPEPSPSSPPKVSTNFTDILAFSGPGPERINGRLAMIGFVAALAVE 122
           +P++     P   P+  P P S PKVST F D+LAFSGP PERINGRLAM+GFVAA+A+E
Sbjct: 64  VPSTSTSATPPQMPQSPPPPVSKPKVSTKFGDLLAFSGPAPERINGRLAMVGFVAAIAME 123

Query: 123 LSKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFA 182
           LSKG++VF QI++GG+ WF+GT+ +LTLAS++PLF+G+ AE+KSKG M+S+AELWNGRFA
Sbjct: 124 LSKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRAEAKSKGFMTSDAELWNGRFA 183

Query: 183 MLGLVALAFTEYVKGGSLV 192
           MLGLVALAFTEYV GG+LV
Sbjct: 184 MLGLVALAFTEYVTGGTLV 193

[Close]
BLAST of Cla021590 vs. Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.4e-39
Identity = 92/197 (46.70%), Postives = 121/197 (61.42%), Query Frame = 1 

Query: 1   MAASAVMQSIPASSATRGVHKT---PTNRLL--PAAVRPCSRSTASFRVRCTAEEDQRER 60
           MA+S    +IPA S       T   P N  L   +   P  R  A F VR   E++++E 
Sbjct: 1   MASSTCYATIPAMSCRGQSTITRFGPNNLFLGKQSYELPLMRRNAKFTVRSMREDNEKEE 60

Query: 61  VIPTSIPSSSPK-PEPSPSSPPKVSTNFTDILAFSGPGPERINGRLAMIGFVAALAVELS 120
                   +    P+ +P+     +    D+ +F G  PERINGR AMIGFVAA+ VEL+
Sbjct: 61  QQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELA 120

Query: 121 KGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAML 180
            G+DVF Q+ NGG+ WF+ TS VL LA+LIP++RG+S E+K+ G  +S+AE+WNGRFAM+
Sbjct: 121 TGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMI 180

Query: 181 GLVALAFTEYVKGGSLV 192
           GLVALAFTEYVKGG L+
Sbjct: 181 GLVALAFTEYVKGGPLI 197

[Close]
BLAST of Cla021590 vs. Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.3e-34
Identity = 82/163 (50.31%), Postives = 103/163 (63.19%), Query Frame = 1 

Query: 30  AAVRPCSRSTASFRVRCTAEEDQRERVIPTSIPSSSPKPEPSPSSPPKVSTNFTDILAFS 89
           AAV P S S +SF  R      +R  V+     + +  P   P + PK ST+  D +AFS
Sbjct: 13  AAVVPRS-SASSFGARSLPALGRRALVVR----AQTEGPSAPPPNKPKASTSIWDEMAFS 72

Query: 90  GPGPERINGRLAMIGFVAALAVELSKGQDVFEQIANG-GIPWFVGTSVVLTLASLIPLFR 149
           GP PERINGRLAM+GFV ALAVE  +G  +  Q+ +G G  WF  T  VL++ASL+PL +
Sbjct: 73  GPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQ 132

Query: 150 GVSAESKSKGIMSSNAELWNGRFAMLGLVALAFTEYVKGGSLV 192
           G SAE ++  IM++NAELWNGRFAMLGLVALA TE + G   +
Sbjct: 133 GESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170

[Close]
BLAST of Cla021590 vs. TrEMBL
Match: A0A0A0LA49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G145780 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 6.8e-87
Identity = 169/192 (88.02%), Postives = 180/192 (93.75%), Query Frame = 1 

Query: 1   MAASAVMQSIPASSATRGVHKTPTNRLLPAAVRPCSRSTASFRVRCTAEEDQRERVIPTS 60
           MAASAVMQSI +++ATRGV++T TNRLLPAA+RPCSRSTA+FRVRC AEEDQRE+ IP+S
Sbjct: 1   MAASAVMQSILSTTATRGVYRTTTNRLLPAALRPCSRSTAAFRVRCMAEEDQREQAIPSS 60

Query: 61  IPSSSPKPEPSPSSPPKV-STNFTDILAFSGPGPERINGRLAMIGFVAALAVELSKGQDV 120
           IP S PKPEPSPS P KV ST  TDILAFSGPGPERINGRLAMIGFVAALAVE+SKGQDV
Sbjct: 61  IPPSPPKPEPSPSPPSKVTSTKLTDILAFSGPGPERINGRLAMIGFVAALAVEVSKGQDV 120

Query: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAMLGLVAL 180
           FEQIANGGIPWFVGTSVVLTLASLIPLF+GVSAES SKGIMSSNAELWNGRFAMLGLVAL
Sbjct: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMSSNAELWNGRFAMLGLVAL 180

Query: 181 AFTEYVKGGSLV 192
           AFTEYVKGGSLV
Sbjct: 181 AFTEYVKGGSLV 192

[Close]
BLAST of Cla021590 vs. TrEMBL
Match: W9RXQ5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013325 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.2e-60
Identity = 132/198 (66.67%), Postives = 155/198 (78.28%), Query Frame = 1 

Query: 1   MAASAVMQ-SIPASS---ATRGVHKTPTNRLLPAAVRP-CSRSTASFRVRC-TAEEDQRE 60
           MA  AVMQ S+  SS   A  G+ K    + LP+   P   R     RVRC T + +Q+E
Sbjct: 1   MAGPAVMQYSVVTSSFVCAANGIKKA-NKQFLPSLNLPRLRRINTPLRVRCMTQDGEQKE 60

Query: 61  RVIPTSIPSSSPKPEPSPSSP-PKVSTNFTDILAFSGPGPERINGRLAMIGFVAALAVEL 120
           +  PT +P+S P+P P+PS P PKVST F+DILAFSGP PERINGRLAM+GFVAA+AVEL
Sbjct: 61  Q--PTPVPNSPPQPTPAPSRPTPKVSTKFSDILAFSGPAPERINGRLAMVGFVAAMAVEL 120

Query: 121 SKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAM 180
           SKGQDVF QI+NGGI WFVGTS+VLTLASL+PLF+GVS ESKS G+M+S+AELWNGRFAM
Sbjct: 121 SKGQDVFAQISNGGISWFVGTSIVLTLASLVPLFKGVSVESKSSGVMTSDAELWNGRFAM 180

Query: 181 LGLVALAFTEYVKGGSLV 192
           LGLVALAFTEYVKGG+LV
Sbjct: 181 LGLVALAFTEYVKGGTLV 195

[Close]
BLAST of Cla021590 vs. TrEMBL
Match: A0A166H4J8_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002366 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58
Identity = 125/199 (62.81%), Postives = 152/199 (76.38%), Query Frame = 1 

Query: 1   MAASAVMQSIPASSATRGVHKTPTNRLLPA--AVRPC-SRSTASFRVRCTAEEDQRERVI 60
           MA+S+VMQS  AS  TRG+     N ++PA  A  P  SR +AS R++C AE+ Q+E   
Sbjct: 1   MASSSVMQSTLASPVTRGITGRKLN-IVPAKCAFMPSLSRRSASLRLKCMAEDGQKEESS 60

Query: 61  PTSIPSSSPKPEPSPSSP-----PKVSTNFTDILAFSGPGPERINGRLAMIGFVAALAVE 120
           P + P+ +  PEP P  P     PK ST+F D+LAFSGP PERINGRLAMIGFVAA+  E
Sbjct: 61  PVTSPTPAAAPEPIPFKPTPPPTPKASTSFFDVLAFSGPAPERINGRLAMIGFVAAIGAE 120

Query: 121 LSKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFA 180
           L+ GQDVF QI+NGG+ WF+GTSVVL+LASLIPLF+GVS +SKS G+M+S+AELWNGR A
Sbjct: 121 LASGQDVFSQISNGGVTWFLGTSVVLSLASLIPLFKGVSVQSKSNGVMTSDAELWNGRIA 180

Query: 181 MLGLVALAFTEYVKGGSLV 192
           MLGLVALAFTEYVKGG+LV
Sbjct: 181 MLGLVALAFTEYVKGGALV 198

[Close]
BLAST of Cla021590 vs. TrEMBL
Match: Q850G4_ARAHY (Putative early light induced protein (Fragment) OS=Arachis hypogaea GN=Gsi-39 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.7e-58
Identity = 124/187 (66.31%), Postives = 145/187 (77.54%), Query Frame = 1 

Query: 3   ASAVMQSIPASSATRGVHKTPTNRL-LPAAVRPCSRSTASFRVRCTAEEDQRERVIPTSI 62
           +S  MQSI AS  TR   ++  N+  +PA   P  R  AS  VR  AEE+Q+E+    + 
Sbjct: 4   SSYAMQSILASPMTRTPSRSRVNQFGVPALYMPNMRRNASLSVRSMAEEEQKEQSTEPTS 63

Query: 63  PSSSPKPEPSPSSPPKVSTNFTDILAFSGPGPERINGRLAMIGFVAALAVELSKGQDVFE 122
           P + P P+P P SP K+ST F+D+LAFSGP PERINGRLAMIGFVAALAVELS GQD+  
Sbjct: 64  PVTPPPPKPQPRSP-KMSTKFSDVLAFSGPAPERINGRLAMIGFVAALAVELSNGQDLLS 123

Query: 123 QIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAMLGLVALAF 182
           QI+NGGIPWF+GTSVVL+LASLIPLF+GVS ESKS G MSS+AELWNGRFAMLGL+ALAF
Sbjct: 124 QISNGGIPWFLGTSVVLSLASLIPLFQGVSVESKSGGFMSSDAELWNGRFAMLGLIALAF 183

Query: 183 TEYVKGG 189
           TEYVKGG
Sbjct: 184 TEYVKGG 189

[Close]
BLAST of Cla021590 vs. TrEMBL
Match: A0A059D2U2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01895 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 6.6e-58
Identity = 125/199 (62.81%), Postives = 147/199 (73.87%), Query Frame = 1 

Query: 1   MAASAVMQSIPASSATR---GVHKTPTNRLLPAAVRPCSRSTASFRVRCTAEEDQRERVI 60
           MA++ +M SIP S  T       K+    L PA   P        RVRC  EE + E   
Sbjct: 1   MASTILMHSIPVSPTTTIDLSSRKSVARGLFPANHSPRLAPRGGLRVRCMTEEIKPEGST 60

Query: 61  PT---SIPSSSPKPEPSPSSPPK--VSTNFTDILAFSGPGPERINGRLAMIGFVAALAVE 120
            T    +PSSSP P PSPS  PK  VSTNFTD+ AFSGP PERINGRLAMIGFVAA+AVE
Sbjct: 61  ETPASDVPSSSPTPTPSPSPKPKRKVSTNFTDVFAFSGPAPERINGRLAMIGFVAAIAVE 120

Query: 121 LSKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFA 180
           LSKGQD+F QI++GGIPWF+GTSV+L++ASL+PLF+GV+ ESKS G+M+S+AELWNGR A
Sbjct: 121 LSKGQDLFAQISDGGIPWFLGTSVLLSVASLVPLFQGVTVESKSDGLMTSDAELWNGRLA 180

Query: 181 MLGLVALAFTEYVKGGSLV 192
           MLGLVALAFTEYVKGG+LV
Sbjct: 181 MLGLVALAFTEYVKGGTLV 199

[Close]
BLAST of Cla021590 vs. NCBI nr
Match: gi|449432666|ref|XP_004134120.1| (PREDICTED: early light-induced protein 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 9.7e-87
Identity = 169/192 (88.02%), Postives = 180/192 (93.75%), Query Frame = 1 

Query: 1   MAASAVMQSIPASSATRGVHKTPTNRLLPAAVRPCSRSTASFRVRCTAEEDQRERVIPTS 60
           MAASAVMQSI +++ATRGV++T TNRLLPAA+RPCSRSTA+FRVRC AEEDQRE+ IP+S
Sbjct: 1   MAASAVMQSILSTTATRGVYRTTTNRLLPAALRPCSRSTAAFRVRCMAEEDQREQAIPSS 60

Query: 61  IPSSSPKPEPSPSSPPKV-STNFTDILAFSGPGPERINGRLAMIGFVAALAVELSKGQDV 120
           IP S PKPEPSPS P KV ST  TDILAFSGPGPERINGRLAMIGFVAALAVE+SKGQDV
Sbjct: 61  IPPSPPKPEPSPSPPSKVTSTKLTDILAFSGPGPERINGRLAMIGFVAALAVEVSKGQDV 120

Query: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAMLGLVAL 180
           FEQIANGGIPWFVGTSVVLTLASLIPLF+GVSAES SKGIMSSNAELWNGRFAMLGLVAL
Sbjct: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMSSNAELWNGRFAMLGLVAL 180

Query: 181 AFTEYVKGGSLV 192
           AFTEYVKGGSLV
Sbjct: 181 AFTEYVKGGSLV 192

[Close]
BLAST of Cla021590 vs. NCBI nr
Match: gi|659076329|ref|XP_008438620.1| (PREDICTED: early light-induced protein 1, chloroplastic [Cucumis melo])

HSP 1 Score: 323.2 bits (827), Expect = 3.1e-85
Identity = 167/192 (86.98%), Postives = 179/192 (93.23%), Query Frame = 1 

Query: 1   MAASAVMQSIPASSATRGVHKTPTNRLLPAAVRPCSRSTASFRVRCTAEEDQRERVIPTS 60
           MAASAVMQSIP+S+A+RGV++T TNRLLPAAVR CSR+T +FRVRCT EEDQRE+ IP+S
Sbjct: 1   MAASAVMQSIPSSTASRGVYRTTTNRLLPAAVRLCSRNTGAFRVRCTGEEDQREQAIPSS 60

Query: 61  IPSSSPKPEPSPSSPPKV-STNFTDILAFSGPGPERINGRLAMIGFVAALAVELSKGQDV 120
           IP S PK EP+PSS  KV ST FTDILAFSGPGPERINGRLAMIGFVAALAVE+SKGQDV
Sbjct: 61  IPPSPPKLEPAPSSTSKVTSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVSKGQDV 120

Query: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAMLGLVAL 180
           FEQIANGGIPWFVGTSVVLTLASLIPLF+GVSAES SKGIMSSNAELWNGRFAMLGLVAL
Sbjct: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMSSNAELWNGRFAMLGLVAL 180

Query: 181 AFTEYVKGGSLV 192
           AFTEYVKGGSLV
Sbjct: 181 AFTEYVKGGSLV 192

[Close]
BLAST of Cla021590 vs. NCBI nr
Match: gi|703142261|ref|XP_010107710.1| (hypothetical protein L484_013325 [Morus notabilis])

HSP 1 Score: 238.0 bits (606), Expect = 1.3e-59
Identity = 132/198 (66.67%), Postives = 155/198 (78.28%), Query Frame = 1 

Query: 1   MAASAVMQ-SIPASS---ATRGVHKTPTNRLLPAAVRP-CSRSTASFRVRC-TAEEDQRE 60
           MA  AVMQ S+  SS   A  G+ K    + LP+   P   R     RVRC T + +Q+E
Sbjct: 1   MAGPAVMQYSVVTSSFVCAANGIKKA-NKQFLPSLNLPRLRRINTPLRVRCMTQDGEQKE 60

Query: 61  RVIPTSIPSSSPKPEPSPSSP-PKVSTNFTDILAFSGPGPERINGRLAMIGFVAALAVEL 120
           +  PT +P+S P+P P+PS P PKVST F+DILAFSGP PERINGRLAM+GFVAA+AVEL
Sbjct: 61  Q--PTPVPNSPPQPTPAPSRPTPKVSTKFSDILAFSGPAPERINGRLAMVGFVAAMAVEL 120

Query: 121 SKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAM 180
           SKGQDVF QI+NGGI WFVGTS+VLTLASL+PLF+GVS ESKS G+M+S+AELWNGRFAM
Sbjct: 121 SKGQDVFAQISNGGISWFVGTSIVLTLASLVPLFKGVSVESKSSGVMTSDAELWNGRFAM 180

Query: 181 LGLVALAFTEYVKGGSLV 192
           LGLVALAFTEYVKGG+LV
Sbjct: 181 LGLVALAFTEYVKGGTLV 195

[Close]
BLAST of Cla021590 vs. NCBI nr
Match: gi|1012243693|ref|XP_015941588.1| (PREDICTED: early light-induced protein, chloroplastic [Arachis duranensis])

HSP 1 Score: 237.3 bits (604), Expect = 2.3e-59
Identity = 126/190 (66.32%), Postives = 148/190 (77.89%), Query Frame = 1 

Query: 3   ASAVMQSIPASSATRGVHKTPTNRL-LPAAVRPCSRSTASFRVRCTAEEDQRERVIPTSI 62
           +S  MQSI AS  TR   ++  N+  +PA   P  R  AS  VR  AEE+Q+E+    + 
Sbjct: 4   SSYAMQSILASPMTRTPSRSRVNQFGVPALYMPNMRRNASLSVRSMAEEEQKEQSTEPTS 63

Query: 63  PSSSPKPEPSPSSPPKVSTNFTDILAFSGPGPERINGRLAMIGFVAALAVELSKGQDVFE 122
           P + P P+P P SP K+ST F+D+LAFSGP PERINGRLAMIGFVAALAVELS GQD+  
Sbjct: 64  PVTPPPPKPQPRSP-KMSTKFSDVLAFSGPAPERINGRLAMIGFVAALAVELSNGQDLLS 123

Query: 123 QIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAMLGLVALAF 182
           QI+NGGIPWF+GTSVVL+LASLIPLF+GVS ESKS G MSS+AELWNGRFAMLGL+ALAF
Sbjct: 124 QISNGGIPWFLGTSVVLSLASLIPLFQGVSVESKSGGFMSSDAELWNGRFAMLGLIALAF 183

Query: 183 TEYVKGGSLV 192
           TEYVKGG+LV
Sbjct: 184 TEYVKGGTLV 192

[Close]
BLAST of Cla021590 vs. NCBI nr
Match: gi|1009141282|ref|XP_015888111.1| (PREDICTED: early light-induced protein 1, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 235.7 bits (600), Expect = 6.6e-59
Identity = 130/198 (65.66%), Postives = 151/198 (76.26%), Query Frame = 1 

Query: 1   MAASAVMQSIPASSAT-RGVHKTPTNRLLPAAVRPCSRSTASFRVRCTAEEDQRERVIPT 60
           MAAS  MQS  ASS T R   K   N   PA ++  S    S +VRC  E++++      
Sbjct: 1   MAASFAMQSTVASSLTCRQSMKKTMNHYYPAQLQRSS----SMKVRCMVEDNKKN----- 60

Query: 61  SIPSSSPKPEPSPSSPP------KVSTNFTDILAFSGPGPERINGRLAMIGFVAALAVEL 120
           S+ SSSP P+P P S P      KVST F+D+LAFSGP PERINGRLAMIGFVAALAVEL
Sbjct: 61  SVSSSSPPPQPQPLSTPPPPPKPKVSTKFSDLLAFSGPAPERINGRLAMIGFVAALAVEL 120

Query: 121 SKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESKSKGIMSSNAELWNGRFAM 180
           S GQD+F+QI NGGIPWF+GTSVVL+LASLIPLF+GVS ESKS+GIM+S+AELWNGRFAM
Sbjct: 121 SNGQDLFDQIGNGGIPWFIGTSVVLSLASLIPLFKGVSVESKSEGIMTSDAELWNGRFAM 180

Query: 181 LGLVALAFTEYVKGGSLV 192
           LGL+ALAFTEYVKGG+LV
Sbjct: 181 LGLIALAFTEYVKGGTLV 189

The following BLAST results are available for this feature:
BLAST of Cla021590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ELIP1_ARATH3.7e-5459.79Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana GN=ELIP1 PE... [more]
ELI_PEA2.4e-5356.85Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1[more]
ELIP2_ARATH8.6e-5155.28Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana GN=ELIP2 PE... [more]
DS22_CRAPL3.4e-3946.70Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum G... [more]
ELI9_HORVU7.3e-3450.31Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum ... [more]
BLAST of Cla021590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA49_CUCSA6.8e-8788.02Uncharacterized protein OS=Cucumis sativus GN=Csa_3G145780 PE=4 SV=1[more]
W9RXQ5_9ROSA9.2e-6066.67Uncharacterized protein OS=Morus notabilis GN=L484_013325 PE=4 SV=1[more]
A0A166H4J8_DAUCA1.3e-5862.81Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002366 PE=4 SV=1[more]
Q850G4_ARAHY1.7e-5866.31Putative early light induced protein (Fragment) OS=Arachis hypogaea GN=Gsi-39 PE... [more]
A0A059D2U2_EUCGR6.6e-5862.81Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01895 PE=4 SV=1[more]
BLAST of Cla021590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432666|ref|XP_004134120.1|9.7e-8788.02PREDICTED: early light-induced protein 1, chloroplastic [Cucumis sativus][more]
gi|659076329|ref|XP_008438620.1|3.1e-8586.98PREDICTED: early light-induced protein 1, chloroplastic [Cucumis melo][more]
gi|703142261|ref|XP_010107710.1|1.3e-5966.67hypothetical protein L484_013325 [Morus notabilis][more]
gi|1012243693|ref|XP_015941588.1|2.3e-5966.32PREDICTED: early light-induced protein, chloroplastic [Arachis duranensis][more]
gi|1009141282|ref|XP_015888111.1|6.6e-5965.66PREDICTED: early light-induced protein 1, chloroplastic [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR023329Chlorophyll_a/b-bd_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021590Cla021590.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 93..183
score: 2.
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 68..187
score: 1.57
NoneNo IPR availableGENE3DG3DSA:1.20.1620.10coord: 94..154
score: 2.2E-4coord: 162..189
score: 2.
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 25..191
score: 9.1
NoneNo IPR availablePANTHERPTHR14154:SF5EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 25..191
score: 9.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla021590Cla97C05G085940Watermelon (97103) v2wmwmbB206
Cla021590Csa3G145780Cucumber (Chinese Long) v2cuwmB233
Cla021590MELO3C006499Melon (DHL92) v3.5.1mewmB461
Cla021590ClCG05G004850Watermelon (Charleston Gray)wcgwmB286
Cla021590CSPI03G12760Wild cucumber (PI 183967)cpiwmB231
Cla021590Cucsa.254640Cucumber (Gy14) v1cgywmB479
Cla021590CmaCh14G017470Cucurbita maxima (Rimu)cmawmB242
Cla021590CmaCh06G013690Cucurbita maxima (Rimu)cmawmB798
Cla021590CmoCh14G017840Cucurbita moschata (Rifu)cmowmB231
Cla021590CmoCh06G013820Cucurbita moschata (Rifu)cmowmB793
Cla021590Lsi05G016390Bottle gourd (USVL1VR-Ls)lsiwmB365
Cla021590Cp4.1LG03g10370Cucurbita pepo (Zucchini)cpewmB613
Cla021590Cp4.1LG08g03840Cucurbita pepo (Zucchini)cpewmB845
Cla021590CsGy3G012910Cucumber (Gy14) v2cgybwmB217
Cla021590MELO3C006499.2Melon (DHL92) v3.6.1medwmB447
Cla021590Carg23487Silver-seed gourdcarwmB0849
Cla021590Carg06172Silver-seed gourdcarwmB0961
Cla021590CsaV3_3G012890Cucumber (Chinese Long) v3cucwmB239
Cla021590Bhi01G000550Wax gourdwgowmB201
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla021590Cucurbita pepo (Zucchini)cpewmB151
Cla021590Cucurbita pepo (Zucchini)cpewmB331
Cla021590Cucurbita pepo (Zucchini)cpewmB707
Cla021590Bottle gourd (USVL1VR-Ls)lsiwmB017
Cla021590Bottle gourd (USVL1VR-Ls)lsiwmB367
Cla021590Cucumber (Gy14) v2cgybwmB117
Cla021590Melon (DHL92) v3.6.1medwmB405
Cla021590Silver-seed gourdcarwmB0218
Cla021590Silver-seed gourdcarwmB0316
Cla021590Silver-seed gourdcarwmB0751
Cla021590Silver-seed gourdcarwmB0782
Cla021590Cucumber (Chinese Long) v3cucwmB136
Cla021590Watermelon (97103) v2wmwmbB203
Cla021590Watermelon (97103) v2wmwmbB217
Cla021590Watermelon (97103) v2wmwmbB221
Cla021590Watermelon (97103) v2wmwmbB232
Cla021590Wax gourdwgowmB073
Cla021590Wax gourdwgowmB270
Cla021590Watermelon (97103) v1wmwmB021
Cla021590Watermelon (97103) v1wmwmB099
Cla021590Watermelon (97103) v1wmwmB133
Cla021590Watermelon (97103) v1wmwmB138
Cla021590Cucumber (Gy14) v1cgywmB221
Cla021590Cucumber (Gy14) v1cgywmB700
Cla021590Cucurbita maxima (Rimu)cmawmB344
Cla021590Cucurbita maxima (Rimu)cmawmB869
Cla021590Cucurbita moschata (Rifu)cmowmB340
Cla021590Cucurbita moschata (Rifu)cmowmB560
Cla021590Cucurbita moschata (Rifu)cmowmB856
Cla021590Melon (DHL92) v3.5.1mewmB414
Cla021590Melon (DHL92) v3.5.1mewmB415
Cla021590Melon (DHL92) v3.5.1mewmB416
Cla021590Watermelon (Charleston Gray)wcgwmB032
Cla021590Watermelon (Charleston Gray)wcgwmB191
Cla021590Watermelon (Charleston Gray)wcgwmB331
Cla021590Watermelon (Charleston Gray)wcgwmB382
Cla021590Cucumber (Chinese Long) v2cuwmB122
Cla021590Cucumber (Chinese Long) v2cuwmB124
Cla021590Cucumber (Chinese Long) v2cuwmB125