Cla021126 (gene) Watermelon (97103) v1

Overview
NameCla021126
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr5 : 636703 .. 639088 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAATCTTCCTCGGTTTGGCCGTACATGGAACCGCTTCTCTTCTTTGCCCCGTCCCGGTAGTGCCTCACGGCCAGAAATTCAACCGTTGACGGCGGCGACGGAGCCGGAAGTTTTTCCCTCTGCTCCGACAACCACTAATATTTATAAAACTTCTCCTATAAGAGAAAGATCCCCTCGAGTTCCATCTCCAATTAGAAAACTTCCCTCGCCGCCATCTTCGCCAAAATATGGGGGTGCCACCACCATTTCGCCTCGCAAACCACTATCTCCAACTCCGACGTACAACCGTTACGACGGTGAATGGCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAGCCCACCCATATCTCTCCGCCATTGTCTCCGCCCAAGCCTAAACACTCTACCGTTGCCACCACTGCACCGCTCTCTCCTCCGGCTCGCACGTTCACGGAGGTAATACAAACAGAATTACCTGATATGATCTTTCGAGGCCGGGTCGCACGAGAACCTGAAGTTACACCCGCTATCACTCTAATGGTTAGTTAAATTACTCCAAAATTAATTTATAGCCCCCTCAATATTCACTTTATTTACGGTAAAACTATTTGAAAATTTATATTGTCTATGTATTATAATCATCATCTTTTAAAATCCAAATTATAATAGTCTGCACATAATCACAAACTATTATACCAATAATAACCAATCCAACATTTCAATAGATCCTTATAATTTTTCTTTTAAAATCATCTAGCTAGTTGGTCTCGTTGTATTTGAGATAGTTGTACTCTCTAATATACCATGGTATTTTTGTTACTTAGCTATGGTAGAACTTTGGTTGCATTTCAATGATAGTAATAAATAAATAGACATCTTGTAAGTTTTGTTTAAAAAAAATATAATTAAATTCAACAATTACACTATAATGATAATTCTAAAACTTAATTAACATGTAAGATAGGTTAGATGATACACTATTAAATTTGCCTTCACCCATTAAGCTTAAGCTTTTTGGTCAATTAGTGATTAAACAAGGTATCGTAACAAGTGGTTTAGGAGGTTCTATGTTCAAACCTCTTTTCACCCCTTAAGCTTAAGATTTGGGTCAATTGGTGATTTAAGATAATATAAGCTACTAGATTGCGGGAATAAGGAACTATATTAATGTTTGATGCTTTTTTATTAAACACTAGAGATTGATTGAATAATGATTTTTTTTTTCTTTTTTTGTCAAATGTGTAATGGGTAACTTCCATGTGACTTTTTAGAATATCAAAAGGTTTTATAGGTATGTTTTGATAGTGATTTTAAAATTGTTAAAATCACTCATTTTTTTATGTTTAAAATTATTTGAAACACATATTTAATTACTCAAAATTAATTTAATATTTAATTTTGTACTATTAAATGTAATTTTCATTTCATCAAAGTTGAGTTTTAATCGTTAAAAACATGTTTTATAGTAATTTTAAAAATAACAAAAATAATTTTAATTATTTTAGGAGAACATCCAAACAAATCCTAAGAATATATTAGAGATCAATAATATTATATTATATGTTTAGGTGATTAACAACAAATTTTTAGACTAGTCTTCTTGTAACACCAACAAAGAGATGTGTTCATTCAAGTAAAAGCTCCAATGGAGCTAGCAAAGTGTCAAAGCACTCCACAAATATTATCTCTTCAATAGTCAAATCAACACTAGATTATAAATCCAATTAAAAAAGATTATTATTATTATTATTATTTTATATAAATTAGAAATATTTAGATGTATCTAGACAATACTTATATTTATGCACATGACAAATTATACTTACTTATTATATATATATATTATGCATGTGATGAAAGTGTGAGATGGATAAAAAGATGAATGCATTTTAGTATTATTCTTATATAAATATATATTTGAACTATATATCTAATTTTTAAAATGATAATTGATGAATAGCTTAAACAGACGGATGAACCCCTTGACAAGACGACAGAGAAGTCAACAAAAACTGACCACTGGAAATCGGAGTACACCTCCGACAAACCCCATCAGAAAAAGAATCAGTACCAACATCAGCATCAACAGCAGCAGCAACAGCAAAGCGATGTTATAAACATAAAAGGCGAGAACATAGGGGCAGTGATGCACATCACTCAATCATCTGATGGCTCGGAAATCCTGAAGAAAAAGCCAATTAGCAAGGAAAACGAAGAGAAAGCAAACAAATCAACTTCAAATCTTCCATCAAAATCGTTCATGAACACCAATTTTCAAGGCGTCAACAATTCCATTCTCTACAATTCGTCTTTAAGCCACCGTGACCCAGGCCTCCACCTTGCCTACTCCAAGAAGCCCAACCATGGCGATTCTCTTCATGCTTCAACCAGGCACTAA

mRNA sequence

ATGTCAAATCTTCCTCGGTTTGGCCGTACATGGAACCGCTTCTCTTCTTTGCCCCGTCCCGGTAGTGCCTCACGGCCAGAAATTCAACCGTTGACGGCGGCGACGGAGCCGGAAGTTTTTCCCTCTGCTCCGACAACCACTAATATTTATAAAACTTCTCCTATAAGAGAAAGATCCCCTCGAGTTCCATCTCCAATTAGAAAACTTCCCTCGCCGCCATCTTCGCCAAAATATGGGGGTGCCACCACCATTTCGCCTCGCAAACCACTATCTCCAACTCCGACGTACAACCGTTACGACGGTGAATGGCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAGCCCACCCATATCTCTCCGCCATTGTCTCCGCCCAAGCCTAAACACTCTACCGTTGCCACCACTGCACCGCTCTCTCCTCCGGCTCGCACGTTCACGGAGGTAATACAAACAGAATTACCTGATATGATCTTTCGAGGCCGGGTCGCACGAGAACCTGAAGTTACACCCGCTATCACTCTAATGCTTAAACAGACGGATGAACCCCTTGACAAGACGACAGAGAAGTCAACAAAAACTGACCACTGGAAATCGGAGTACACCTCCGACAAACCCCATCAGAAAAAGAATCAGTACCAACATCAGCATCAACAGCAGCAGCAACAGCAAAGCGATGTTATAAACATAAAAGGCGAGAACATAGGGGCAGTGATGCACATCACTCAATCATCTGATGGCTCGGAAATCCTGAAGAAAAAGCCAATTAGCAAGGAAAACGAAGAGAAAGCAAACAAATCAACTTCAAATCTTCCATCAAAATCGTTCATGAACACCAATTTTCAAGGCGTCAACAATTCCATTCTCTACAATTCGTCTTTAAGCCACCGTGACCCAGGCCTCCACCTTGCCTACTCCAAGAAGCCCAACCATGGCGATTCTCTTCATGCTTCAACCAGGCACTAA

Coding sequence (CDS)

ATGTCAAATCTTCCTCGGTTTGGCCGTACATGGAACCGCTTCTCTTCTTTGCCCCGTCCCGGTAGTGCCTCACGGCCAGAAATTCAACCGTTGACGGCGGCGACGGAGCCGGAAGTTTTTCCCTCTGCTCCGACAACCACTAATATTTATAAAACTTCTCCTATAAGAGAAAGATCCCCTCGAGTTCCATCTCCAATTAGAAAACTTCCCTCGCCGCCATCTTCGCCAAAATATGGGGGTGCCACCACCATTTCGCCTCGCAAACCACTATCTCCAACTCCGACGTACAACCGTTACGACGGTGAATGGCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAGCCCACCCATATCTCTCCGCCATTGTCTCCGCCCAAGCCTAAACACTCTACCGTTGCCACCACTGCACCGCTCTCTCCTCCGGCTCGCACGTTCACGGAGGTAATACAAACAGAATTACCTGATATGATCTTTCGAGGCCGGGTCGCACGAGAACCTGAAGTTACACCCGCTATCACTCTAATGCTTAAACAGACGGATGAACCCCTTGACAAGACGACAGAGAAGTCAACAAAAACTGACCACTGGAAATCGGAGTACACCTCCGACAAACCCCATCAGAAAAAGAATCAGTACCAACATCAGCATCAACAGCAGCAGCAACAGCAAAGCGATGTTATAAACATAAAAGGCGAGAACATAGGGGCAGTGATGCACATCACTCAATCATCTGATGGCTCGGAAATCCTGAAGAAAAAGCCAATTAGCAAGGAAAACGAAGAGAAAGCAAACAAATCAACTTCAAATCTTCCATCAAAATCGTTCATGAACACCAATTTTCAAGGCGTCAACAATTCCATTCTCTACAATTCGTCTTTAAGCCACCGTGACCCAGGCCTCCACCTTGCCTACTCCAAGAAGCCCAACCATGGCGATTCTCTTCATGCTTCAACCAGGCACTAA

Protein sequence

MSNLPRFGRTWNRFSSLPRPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQTDEPLDKTTEKSTKTDHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGENIGAVMHITQSSDGSEILKKKPISKENEEKANKSTSNLPSKSFMNTNFQGVNNSILYNSSLSHRDPGLHLAYSKKPNHGDSLHASTRH
Homology
[Close]
BLAST of Cla021126 vs. TrEMBL
Match: A0A0A0L5T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 9.6e-110
Identity = 222/331 (67.07%), Postives = 249/331 (75.23%), Query Frame = 1 

Query: 1   MSNLPRFGRTWNRFSSLPRPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSP 60
           MSNLPRFGR WNRFSSLPRPG+A+RPE QP TAATEPEVFPSA  TTN ++TSPI++R+P
Sbjct: 1   MSNLPRFGRQWNRFSSLPRPGTATRPEPQPFTAATEPEVFPSAVPTTNTFQTSPIKQRTP 60

Query: 61  RVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHIS 120
           R+ SP++K  SPPSSPKY GA T+SPRKPLSP P +NRY+GE RTSATTSPKTFKPTHIS
Sbjct: 61  RLSSPVKKFSSPPSSPKYSGAGTVSPRKPLSPPPVHNRYEGERRTSATTSPKTFKPTHIS 120

Query: 121 PPLSPPKPKHSTVAT-TAPLSPPARTFTEVIQTELPDMIFRGRVAREPE--VTPAITLML 180
           PP SP KP+HSTV T  APLSP A          LP    R +V REPE  + P     +
Sbjct: 121 PPPSPSKPRHSTVPTAVAPLSPLA----------LP----RSQVRREPEHSLRPRSPPEI 180

Query: 181 KQTDEPLD-KTTEKSTKTDHWK--SEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGEN 240
           +Q        TTEK TKTDH++   EY + KP QK        QQ QQ QSDVINIKGEN
Sbjct: 181 EQKKILYQTTTTEKPTKTDHYRQNDEYGASKPQQK--------QQHQQLQSDVINIKGEN 240

Query: 241 IGAVMHITQSSDGSEILKKKPI---SKENEEKANKSTSNLPSKSFMNTNFQGVNNSILYN 300
           +GAVMHITQSSDGSE++KKKP    SKENEEK NKS SN P KSFMN+NFQGVNNSILYN
Sbjct: 241 VGAVMHITQSSDGSEVIKKKPTVGQSKENEEKTNKSNSNYPGKSFMNSNFQGVNNSILYN 300

Query: 301 SSLSHRDPGLHLAY-SKKPNHGDSLHASTRH 322
           SSLSHRDPGLHLA+ SKK  HGDS+H S RH
Sbjct: 301 SSLSHRDPGLHLAFGSKKSKHGDSIHDS-RH 308

[Close]
BLAST of Cla021126 vs. TrEMBL
Match: A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26
Identity = 113/326 (34.66%), Postives = 156/326 (47.85%), Query Frame = 1 

Query: 1   MSNLPRFGRTWNRFSSLPRP-GSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERS 60
           M+NLPR GRT  R SS+P P  +A++P ++P     + E  P A + T     SP RE  
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPAVEP-----KYETMPYATSITTPAPASPRRESP 60

Query: 61  PRVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHI 120
             + SP +K  SP +S         + R P  P    ++Y  E R   TT          
Sbjct: 61  RPLSSPSKKATSPFASRVDSSPAAKATRSP--PDSIGDKYL-ERRNGETT---------- 120

Query: 121 SPPLSPPKPKHSTVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQ 180
            PPL+P K   S  A T+PLSP A   ++VI          G  A +P V P +      
Sbjct: 121 -PPLTPAK---SRPAKTSPLSPLALPRSQVITGN-------GTTA-QPRVQPEVETKGIV 180

Query: 181 TDEPLDKTTEKSTKTDHWKSEYTSDKP-HQKKNQYQHQHQQQQQQQSDVINIKGENIGAV 240
            ++  D+   KS +    +SE+ S K  HQK            QQ+  V+ +KG N+GAV
Sbjct: 181 YNKAADEKPSKSNR----QSEHGSGKSVHQK------------QQKPGVMKLKGHNVGAV 240

Query: 241 MHITQSSDG----SEILKKKPISKE-------NEEKANKSTSNLPSKSFMNTNFQGVNNS 300
           M + +SS G     E LKKK    +       +E+K        P  +FMN+NFQ VNNS
Sbjct: 241 MEVNKSSAGYRLGGETLKKKETEDDGDVDGYGHEDKKTGRKKKPPISAFMNSNFQSVNNS 277

Query: 301 ILYNSSLSHRDPGLHLAYSKKPNHGD 314
           +L++SS  HRDPGLHL++   PN  D
Sbjct: 301 LLFDSSCQHRDPGLHLSF---PNAAD 277

[Close]
BLAST of Cla021126 vs. TrEMBL
Match: Q9ZNU3_ARATH (Putative extensin OS=Arabidopsis thaliana GN=At2g46630 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.9e-21
Identity = 95/342 (27.78%), Postives = 139/342 (40.64%), Query Frame = 1 

Query: 20  PGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKYG 79
           P S  R + QPLT   +     S P   + Y + P R  SP  P      P PP    Y 
Sbjct: 63  PPSPPRQQQQPLTPPRQKAPPTSPPQERSPYHSPPSRHMSPPTPPKAATPPPPPPRSSYT 122

Query: 80  GATT-------ISPRKPLSP-TPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHS 139
              +       + PRKP SP +P ++      R++ + S KT  P+        P P+  
Sbjct: 123 SPPSPKEVQEALPPRKPNSPPSPAHSS-----RSTTSESVKTRSPSESENHRKAPSPR-- 182

Query: 140 TVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQTDEPLDKTTEKS 199
                +P S PA       +T   +++   + ++  E            +   D     +
Sbjct: 183 ---VLSPYSLPASLLHSERETTQKNILTAEKTSQTHETNH------HNQNHNHDYNQNHN 242

Query: 200 TKTDHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSD------VINIKGENIGAVMHITQSS 259
              +H    Y  ++ HQ  N  +  H+Q     S+      VI I GEN GAVM I +S 
Sbjct: 243 YNQNH---SYNQNQNHQGNNP-KKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSP 302

Query: 260 DGSEI--------------------LKKKPISKENEEKA---------NKSTSNLPSKSF 319
            G++                     L+    S  +E +          NK  SNLP K+F
Sbjct: 303 QGNKTGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKGNSNLPMKAF 362

[Close]
BLAST of Cla021126 vs. TrEMBL
Match: D7LF69_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_904132 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.1e-20
Identity = 97/350 (27.71%), Postives = 130/350 (37.14%), Query Frame = 1 

Query: 19  RPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKY 78
           +P S  R + QPLT           P       TSP +ERSP    P R + SPP+ PK 
Sbjct: 62  QPPSPPRQQQQPLT-----------PPRQQQQPTSPPQERSPYHSPPSRHM-SPPTPPKA 121

Query: 79  GGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVATTAP 138
                  PR   +P P+                    P  +   L P KP     +  +P
Sbjct: 122 ATPPPPPPRSSYTPPPS--------------------PKEVQEALPPRKPN----SPRSP 181

Query: 139 LSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQTDEPLDKT-----TEKSTK 198
                 T +E ++T         R A  P V    +L   Q     + T     T + T 
Sbjct: 182 AHSSRSTSSESVKTRSASESENHRKAPSPRVLSPYSLPPSQLHSERETTQKNILTAEKTS 241

Query: 199 TDHWKSEYTSDKPHQKKNQYQHQHQQQ---------QQQQSD--------VINIKGENIG 258
             H  S +  +  + + + Y   H  Q         Q   SD        VI I GEN G
Sbjct: 242 QTHEPSHHNQNHNYNQNHNYNQNHNHQGNNPKKMHRQPSTSDSENIMSTRVITIAGENKG 301

Query: 259 AVMHITQS----------------------------SDGSEILKKKPISKENEEKANKST 318
           AVM I +S                            S  S    +    K+  +  N   
Sbjct: 302 AVMEILRSPQGNKTGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNPNNGN 361

[Close]
BLAST of Cla021126 vs. TrEMBL
Match: A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.4e-20
Identity = 90/314 (28.66%), Postives = 140/314 (44.59%), Query Frame = 1 

Query: 1   MSNLPRFGRTWNRFSSLPRPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSP 60
           M+NLPR+GR W R S++ R    +   +Q      EPE+ P APT   I    P      
Sbjct: 1   MANLPRYGRRW-RLSTVSRLAPTATQSVQE----PEPEILPLAPT---IQTLQPFE---- 60

Query: 61  RVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHIS 120
                    P+PP++     +T   P   +SP     +Y+      AT   +   P  + 
Sbjct: 61  ---------PTPPAAAAPPSSTPGEPTPRISPPAASPKYE------ATVIREASPP--LK 120

Query: 121 PPLSPP-KPKHSTVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQ 180
           P  SPP  P   +V     +SP   ++ E ++   P +     + +  +VT   + +  +
Sbjct: 121 PARSPPVSPPRKSVDPRHSISP--NSYQEPLKPTRPSLSTLA-LPKSADVTTVPSAIKPE 180

Query: 181 TDEPLDKTTEKSTKTDHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGENIGAVM 240
            ++  D   +   + D+      S KP                 Q+  IN+ G+NIGAVM
Sbjct: 181 VEQKTDSFKKSDRQVDN-----VSAKP-------------PPSLQAKAINLTGDNIGAVM 240

Query: 241 HITQSSD---GSEILKK----KPISKENEEKANKSTSNLPSKSFMNTNFQGVNNSILYNS 300
            I Q SD   G E+ +K      + +EN+ + ++  +  P     N+NFQ VNNS++YNS
Sbjct: 241 KINQFSDKISGGEVTRKIETKTGVQQENDMEKSRRETEFPMTPITNSNFQEVNNSVMYNS 264

Query: 301 SLSHRDPGLHLAYS 307
           S S RDPGLHL +S
Sbjct: 301 SCSGRDPGLHLDFS 264

[Close]
BLAST of Cla021126 vs. NCBI nr
Match: gi|449432016|ref|XP_004133796.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus])

HSP 1 Score: 404.8 bits (1039), Expect = 1.4e-109
Identity = 222/331 (67.07%), Postives = 249/331 (75.23%), Query Frame = 1 

Query: 1   MSNLPRFGRTWNRFSSLPRPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSP 60
           MSNLPRFGR WNRFSSLPRPG+A+RPE QP TAATEPEVFPSA  TTN ++TSPI++R+P
Sbjct: 1   MSNLPRFGRQWNRFSSLPRPGTATRPEPQPFTAATEPEVFPSAVPTTNTFQTSPIKQRTP 60

Query: 61  RVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHIS 120
           R+ SP++K  SPPSSPKY GA T+SPRKPLSP P +NRY+GE RTSATTSPKTFKPTHIS
Sbjct: 61  RLSSPVKKFSSPPSSPKYSGAGTVSPRKPLSPPPVHNRYEGERRTSATTSPKTFKPTHIS 120

Query: 121 PPLSPPKPKHSTVAT-TAPLSPPARTFTEVIQTELPDMIFRGRVAREPE--VTPAITLML 180
           PP SP KP+HSTV T  APLSP A          LP    R +V REPE  + P     +
Sbjct: 121 PPPSPSKPRHSTVPTAVAPLSPLA----------LP----RSQVRREPEHSLRPRSPPEI 180

Query: 181 KQTDEPLD-KTTEKSTKTDHWK--SEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGEN 240
           +Q        TTEK TKTDH++   EY + KP QK        QQ QQ QSDVINIKGEN
Sbjct: 181 EQKKILYQTTTTEKPTKTDHYRQNDEYGASKPQQK--------QQHQQLQSDVINIKGEN 240

Query: 241 IGAVMHITQSSDGSEILKKKPI---SKENEEKANKSTSNLPSKSFMNTNFQGVNNSILYN 300
           +GAVMHITQSSDGSE++KKKP    SKENEEK NKS SN P KSFMN+NFQGVNNSILYN
Sbjct: 241 VGAVMHITQSSDGSEVIKKKPTVGQSKENEEKTNKSNSNYPGKSFMNSNFQGVNNSILYN 300

Query: 301 SSLSHRDPGLHLAY-SKKPNHGDSLHASTRH 322
           SSLSHRDPGLHLA+ SKK  HGDS+H S RH
Sbjct: 301 SSLSHRDPGLHLAFGSKKSKHGDSIHDS-RH 308

[Close]
BLAST of Cla021126 vs. NCBI nr
Match: gi|659074888|ref|XP_008437849.1| (PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis melo])

HSP 1 Score: 397.9 bits (1021), Expect = 1.7e-107
Identity = 224/329 (68.09%), Postives = 249/329 (75.68%), Query Frame = 1 

Query: 1   MSNLPRFGRTWNRFSSLPRPGSASRPEIQP-LTAATEPEVFPSAPTTTNIYKTSPIRERS 60
           MSNLPRFGRTWNRFSSLPRP +A+R E QP  TAATEPEVFPSA  TTN  +TSP+++R+
Sbjct: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRT 60

Query: 61  PRVPSPIRKLPSPPSSPKYGGAT-TISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTH 120
           PR+ SP++K PSPPSSPKY GAT TISPRKPLSP  TYNR+DGE RTSATTSPKTFKPT+
Sbjct: 61  PRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTY 120

Query: 121 ISPPLSPPKPKHSTVAT-TAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLML 180
           ISPP SPPKPKHST AT  APLSP A   +EV +   P+   R R   E E       +L
Sbjct: 121 ISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRRE--PERSIRPRSPPEIEQKK----IL 180

Query: 181 KQTDEPLDKTTEKSTKTDHWKS-EYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGENIG 240
            QT      TTEK TKTD+ ++ +Y + KP QK        Q  QQ QSDVINIKG+N+G
Sbjct: 181 YQT-----TTTEKPTKTDYRQTDQYGTSKPQQK--------QHHQQLQSDVINIKGDNVG 240

Query: 241 AVMHITQSSDGSEILKKKPI---SKENEEKANKSTSNLPSKSFMNTNFQGVNNSILYNSS 300
           AVMHITQSSDGSEILKKKP    SKENEEK NKS SN P KSFMN+NFQGVNNSILYNSS
Sbjct: 241 AVMHITQSSDGSEILKKKPSVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSS 300

Query: 301 LSHRDPGLHLAY-SKKPNHGDSLHASTRH 322
           LSHRDPGLHLAY SK P HGDS+H S RH
Sbjct: 301 LSHRDPGLHLAYSSKNPKHGDSIHES-RH 309

[Close]
BLAST of Cla021126 vs. NCBI nr
Match: gi|659074890|ref|XP_008437851.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo])

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-33
Identity = 116/325 (35.69%), Postives = 156/325 (48.00%), Query Frame = 1 

Query: 1   MSNLPRFGRTWNRFSSLPRP-GSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERS 60
           M+NLPRFGR   R  ++P P  +A++P ++P       ++ P A T T     SP RE  
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEP-----RYQILPFATTITTPAPASPRRESP 60

Query: 61  PRVPSPIRKLPSPPSSPKYGGATTISPRKP-----LSPTPTYNRYDGEWRTSATTSPKTF 120
             + SP +K  SP +SPKYG + T   R P     +SP  +      E R   TT     
Sbjct: 61  RPLSSPPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETT----- 120

Query: 121 KPTHISPPLSPPKPKHSTVATTAPLSPPARTFTEVIQTELP-DMIFRGR-VAREPEVTPA 180
                 PPLSP K +    A T PLSP A          LP + +F G     +P V P 
Sbjct: 121 ------PPLSPAKSRR---AKTPPLSPLA----------LPRNQVFTGNGTTAQPRVQPE 180

Query: 181 ITLMLKQTDEPLDKTTEKSTKTDHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKG 240
           +    +      +KT EK +K++    EY S K HQKK            Q+ +VI +KG
Sbjct: 181 V----ETKGIVYNKTVEKPSKSNRSSGEYGSSKSHQKK------------QKPEVIKLKG 240

Query: 241 ENIGAVMHITQSSDG----SEILKKKPISK--------ENEEKANKSTSNLPSKSFMNTN 300
            N+GAVM I +SS G     E LKK               ++K        P  +FMN+N
Sbjct: 241 HNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTETKKKEPPITAFMNSN 280

Query: 301 FQGVNNSILYNSSLSHRDPGLHLAY 306
           FQ VNNS+L++SS +HRDPGLHLA+
Sbjct: 301 FQSVNNSLLFDSSCNHRDPGLHLAF 280

[Close]
BLAST of Cla021126 vs. NCBI nr
Match: gi|449432018|ref|XP_004133797.1| (PREDICTED: atherin-like [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26
Identity = 113/326 (34.66%), Postives = 156/326 (47.85%), Query Frame = 1 

Query: 1   MSNLPRFGRTWNRFSSLPRP-GSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERS 60
           M+NLPR GRT  R SS+P P  +A++P ++P     + E  P A + T     SP RE  
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPAVEP-----KYETMPYATSITTPAPASPRRESP 60

Query: 61  PRVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHI 120
             + SP +K  SP +S         + R P  P    ++Y  E R   TT          
Sbjct: 61  RPLSSPSKKATSPFASRVDSSPAAKATRSP--PDSIGDKYL-ERRNGETT---------- 120

Query: 121 SPPLSPPKPKHSTVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQ 180
            PPL+P K   S  A T+PLSP A   ++VI          G  A +P V P +      
Sbjct: 121 -PPLTPAK---SRPAKTSPLSPLALPRSQVITGN-------GTTA-QPRVQPEVETKGIV 180

Query: 181 TDEPLDKTTEKSTKTDHWKSEYTSDKP-HQKKNQYQHQHQQQQQQQSDVINIKGENIGAV 240
            ++  D+   KS +    +SE+ S K  HQK            QQ+  V+ +KG N+GAV
Sbjct: 181 YNKAADEKPSKSNR----QSEHGSGKSVHQK------------QQKPGVMKLKGHNVGAV 240

Query: 241 MHITQSSDG----SEILKKKPISKE-------NEEKANKSTSNLPSKSFMNTNFQGVNNS 300
           M + +SS G     E LKKK    +       +E+K        P  +FMN+NFQ VNNS
Sbjct: 241 MEVNKSSAGYRLGGETLKKKETEDDGDVDGYGHEDKKTGRKKKPPISAFMNSNFQSVNNS 277

Query: 301 ILYNSSLSHRDPGLHLAYSKKPNHGD 314
           +L++SS  HRDPGLHL++   PN  D
Sbjct: 301 LLFDSSCQHRDPGLHLSF---PNAAD 277

[Close]
BLAST of Cla021126 vs. NCBI nr
Match: gi|727450094|ref|XP_010506676.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like [Camelina sativa])

HSP 1 Score: 113.2 bits (282), Expect = 8.3e-22
Identity = 106/360 (29.44%), Postives = 140/360 (38.89%), Query Frame = 1 

Query: 19  RPGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKY 78
           +P S  R + QPLT   +    PS          SP +ERSP    P R + SPP+ PK 
Sbjct: 66  QPPSPPRQQQQPLTPPRQKAPSPS----------SPHQERSPYHSPPSRHM-SPPTPPK- 125

Query: 79  GGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISP-PLSPPKPKHSTVATTA 138
             AT   P   LS TP               SPK  +     P P SPP P HS+ +TT+
Sbjct: 126 -AATPPPPPTRLSYTPP-------------PSPKEVQEALPQPKPKSPPSPAHSSHSTTS 185

Query: 139 PLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQTDEPLDKT-----TEKST 198
             S   R+ T   + +        R A  P V    +L   Q     + T     T + T
Sbjct: 186 E-SVKTRSVTSDSENQ--------RKAPSPRVLSPYSLPPSQLHSERETTQKNILTAEKT 245

Query: 199 KTDHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSD-------------------------V 258
              H  ++Y  +  +     Y H H   Q                              V
Sbjct: 246 SQLHEPNQYNHNHNNNHNQNYNHNHNHNQNHNHSYQGNNPRKMHRQPSPFDSESIMGTRV 305

Query: 259 INIKGENIGAVMHITQSSDGSEI--------------------LKKKPISKENEE----- 318
           I I GEN GAVM I +S   ++                     LK    S  ++E     
Sbjct: 306 ITIAGENKGAVMEILRSPPSNKTGGSGTHSSRIFHGTGEKGRRLKSSSSSSSSDEGEGKK 365

The following BLAST results are available for this feature:
BLAST of Cla021126 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5T3_CUCSA9.6e-11067.07Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1[more]
A0A0A0L320_CUCSA1.0e-2634.66Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1[more]
Q9ZNU3_ARATH4.9e-2127.78Putative extensin OS=Arabidopsis thaliana GN=At2g46630 PE=4 SV=1[more]
D7LF69_ARALL4.1e-2027.71Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA... [more]
A0A0A0L8G8_CUCSA5.4e-2028.66Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1[more]
BLAST of Cla021126 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432016|ref|XP_004133796.1|1.4e-10967.07PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus][more]
gi|659074888|ref|XP_008437849.1|1.7e-10768.09PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis me... [more]
gi|659074890|ref|XP_008437851.1|2.7e-3335.69PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo][more]
gi|449432018|ref|XP_004133797.1|1.5e-2634.66PREDICTED: atherin-like [Cucumis sativus][more]
gi|727450094|ref|XP_010506676.1|8.3e-2229.44PREDICTED: serine/arginine repetitive matrix protein 1-like [Camelina sativa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021126Cla021126.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33472FAMILY NOT NAMEDcoord: 22..316
score: 3.6
NoneNo IPR availablePANTHERPTHR33472:SF1EXTENSIN-RELATEDcoord: 22..316
score: 3.6