Cla016954 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla016954
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Calmodulin-like protein 1 (AHRD V1 -- B4FRR5_MAIZE); contains Interpro domain(s) IPR011992 EF-Hand type
Location	Chr10 : 21630850 .. 21631347 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCTCCTCAAATCCTTCAATCCCAACCGTCTCTTCTCTTCTTCCAAATCCCACCGCTCCAAACTCTCCCGATCTCAACCTCCTTCCTTCGGCTCCGCCTCCTCCTCCTCCTCCGCCGGCACCCCCACCAGCGTCTTGCCGTCCGGCGTCTGGTCCGACTTCTCCGACTCCACACTCTCTCTCAAGGAACTGGAGGCTCTACTCGGTTTAATCGGAGCCGAACCGCCGAGTGAGGAAGAGCTCAAGATTATGATGGGCGAAATGGACCGGGTCGGACCGGCTTGCCACTCCGAGCTACGAGACACGTTTGAGATATTCGACGCTGACCGCGACGGGAGAATTACGGCGGAGGAGCTTTTTAGTGTGTTCACGGCTATGGGAGATGAGCGGTGCACGTTAGAGGATTGCCGGCGTATGATAGCGGGAGTAGACAAGAATGGGGATGGGTTCGTCTGCTTCGAAGACTTTGCGCGTATGATGGACTGCCAGAGATGA

mRNA sequence

ATGAAGCTCCTCAAATCCTTCAATCCCAACCGTCTCTTCTCTTCTTCCAAATCCCACCGCTCCAAACTCTCCCGATCTCAACCTCCTTCCTTCGGCTCCGCCTCCTCCTCCTCCTCCGCCGGCACCCCCACCAGCGTCTTGCCGTCCGGCGTCTGGTCCGACTTCTCCGACTCCACACTCTCTCTCAAGGAACTGGAGGCTCTACTCGGTTTAATCGGAGCCGAACCGCCGAGTGAGGAAGAGCTCAAGATTATGATGGGCGAAATGGACCGGGTCGGACCGGCTTGCCACTCCGAGCTACGAGACACGTTTGAGATATTCGACGCTGACCGCGACGGGAGAATTACGGCGGAGGAGCTTTTTAGTGTGTTCACGGCTATGGGAGATGAGCGGTGCACGTTAGAGGATTGCCGGCGTATGATAGCGGGAGTAGACAAGAATGGGGATGGGTTCGTCTGCTTCGAAGACTTTGCGCGTATGATGGACTGCCAGAGATGA

Coding sequence (CDS)

ATGAAGCTCCTCAAATCCTTCAATCCCAACCGTCTCTTCTCTTCTTCCAAATCCCACCGCTCCAAACTCTCCCGATCTCAACCTCCTTCCTTCGGCTCCGCCTCCTCCTCCTCCTCCGCCGGCACCCCCACCAGCGTCTTGCCGTCCGGCGTCTGGTCCGACTTCTCCGACTCCACACTCTCTCTCAAGGAACTGGAGGCTCTACTCGGTTTAATCGGAGCCGAACCGCCGAGTGAGGAAGAGCTCAAGATTATGATGGGCGAAATGGACCGGGTCGGACCGGCTTGCCACTCCGAGCTACGAGACACGTTTGAGATATTCGACGCTGACCGCGACGGGAGAATTACGGCGGAGGAGCTTTTTAGTGTGTTCACGGCTATGGGAGATGAGCGGTGCACGTTAGAGGATTGCCGGCGTATGATAGCGGGAGTAGACAAGAATGGGGATGGGTTCGTCTGCTTCGAAGACTTTGCGCGTATGATGGACTGCCAGAGATGA

Protein sequence

MKLLKSFNPNRLFSSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLPSGVWSDFSDSTLSLKELEALLGLIGAEPPSEEELKIMMGEMDRVGPACHSELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR

Homology

[Close]

BLAST of Cla016954 vs. Swiss-Prot
Match: CML35_ARATH (Probable calcium-binding protein CML35 OS=Arabidopsis thaliana GN=CML35 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-32
Identity = 91/209 (43.54%), Postives = 112/209 (53.59%), Query Frame = 1


Query: 1   MKLLKSFN---PNRLFSSSKSHRSKLSRSQPPSFGS-ASSSSSAG-----------TPTS 60
           MKL  S N   P RLF +    ++ +SRS+P SF S ASSSSS G           TP S
Sbjct: 1   MKLAASLNRLSPKRLFRTKS--KASVSRSEPSSFSSNASSSSSDGSYGNLKQGPTATPIS 60

Query: 61  VLPSGVWSDFS-------------DSTLSLKELEALLGLIGAEPPSEEELKIMMGEMDRV 120
           VLP      ++             D  +S  +L AL+  +  EPPS+EE+ +M+ E+D  
Sbjct: 61  VLPQNSGDFYTELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGG 120

Query: 121 GPACHS--------------------ELRDTFEIFDADRDGRITAEELFSVFTAMGDERC 162
              C S                    ELR+ FEIFD DR+G+I+AEEL  VF  +GDERC
Sbjct: 121 DGGCISLEDLASRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERC 180

[Close]

BLAST of Cla016954 vs. Swiss-Prot
Match: CML36_ARATH (Probable calcium-binding protein CML36 OS=Arabidopsis thaliana GN=CML36 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.2e-31
Identity = 95/212 (44.81%), Postives = 120/212 (56.60%), Query Frame = 1


Query: 1   MKLLKSFNPNRLFSSSKSHRSKLSRSQPP-SFGSASSSS------SAG-------TPTSV 60
           MKL K   P R F  SK  RS +S+S    SFGSASSSS      S G       TPTS+
Sbjct: 1   MKLAKLI-PKRFFIRSKD-RSTVSKSPTAFSFGSASSSSGQDCKNSGGDGGGGSVTPTSI 60

Query: 61  LPSGVWSDFS---------------DSTLSLKELEALLGLIGAEPPSEEELKIMM----- 120
           LP  V S +S               D  +S  +LE+LL  +G +P +EEE+ +M+     
Sbjct: 61  LPE-VPSPYSYVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKEVDC 120

Query: 121 ------------GEMDRVGPACHS-ELRDTFEIFDADRDGRITAEELFSVFTAMGDERCT 166
                         +  + PA  S EL++TFE FDADRDG I+A+EL  VF+ +GDERCT
Sbjct: 121 DGDGTIRLEELASRVVSLDPARDSTELKETFEFFDADRDGLISADELLRVFSTIGDERCT 180

[Close]

BLAST of Cla016954 vs. Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.9e-15
Identity = 49/124 (39.52%), Postives = 70/124 (56.45%), Query Frame = 1


Query: 57  DSTLSLKELEALLGLIGAEPPSEEELKIMMGEMDRVGPACHS------------------ 116
           D  +S KEL A++  +G E P EEEL+  + E+DR G    +                  
Sbjct: 50  DGKISSKELGAIMTSLGHEVP-EEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVL 109

Query: 117 -ELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDF 162
             L+D F ++D D +G I+AEEL  V  ++GDE C++ +CR+MI GVDK+GDG + FE+F
Sbjct: 110 ENLKDAFSVYDIDGNGSISAEELHEVLRSLGDE-CSIAECRKMIGGVDKDGDGTIDFEEF 169

HSP 2 Score: 49.3 bits (116), Expect = 4.7e-05
Identity = 22/62 (35.48%), Postives = 38/62 (61.29%), Query Frame = 1


Query: 99  ELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFA 158
           EL   F+ FD + DG+I+++EL ++ T++G E    E+  + I  +D+ GDG++ FE+F 
Sbjct: 37  ELEAVFKKFDVNGDGKISSKELGAIMTSLGHE-VPEEELEKAITEIDRKGDGYINFEEFV 96

Query: 159 RM 161
            +
Sbjct: 97  EL 97

[Close]

BLAST of Cla016954 vs. Swiss-Prot
Match: CML16_ORYSJ (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica GN=CML16 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.7e-13
Identity = 54/128 (42.19%), Postives = 66/128 (51.56%), Query Frame = 1


Query: 57  DSTLSLKELEALLGLIGAEPPSEE----ELKIMMGEMDRV------------------GP 116
           D  +S  EL A+   I A PPSE     E+  MM E+D                    G 
Sbjct: 40  DGRISPSELAAVTRAI-APPPSESAGGREVAAMMNELDTDRDGFVDLGEFAAFHGRGRGD 99

Query: 117 ACH-SELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVC 162
           A H +ELR  F+++D D DGRITA EL  V   +G E C+ E+C RMIA VD +GDG V 
Sbjct: 100 AEHEAELRAAFDVYDVDGDGRITAAELGKVLGRIG-EGCSAEECERMIASVDVDGDGCVG 159

HSP 2 Score: 36.2 bits (82), Expect = 4.1e-01
Identity = 23/64 (35.94%), Postives = 31/64 (48.44%), Query Frame = 1


Query: 98  SELRDTFEIFDADRDGRITAEELFSVFTAMG---DERCTLEDCRRMIAGVDKNGDGFVCF 157
           +E+   F  FDAD DGRI+  EL +V  A+     E     +   M+  +D + DGFV  
Sbjct: 26  AEIERVFTRFDADGDGRISPSELAAVTRAIAPPPSESAGGREVAAMMNELDTDRDGFVDL 85

Query: 158 EDFA 159
            +FA
Sbjct: 86  GEFA 89

[Close]

BLAST of Cla016954 vs. Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.2e-13
Identity = 58/172 (33.72%), Postives = 82/172 (47.67%), Query Frame = 1


Query: 9   PNRLFSSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLPSGVWSDFS---DSTLSLKEL 68
           P+R+FS  +   S LS   P  F   S +             V+S F    D  +S  E 
Sbjct: 22  PSRMFSRDRQS-SGLSSPGPGGFSQPSVNEMRR---------VFSRFDLDKDGKISQTEY 81

Query: 69  EALLGLIGAEPPSEEELKIMMG-EMD---------------RVGPACHSELRDTFEIFDA 128
           + +L  +G E   E+  KI    ++D               R G    S++R++F  FD 
Sbjct: 82  KVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSDIRNSFWTFDL 141

Query: 129 DRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMM 162
           + DG+I+AEE+ SV   +G ERC+LEDC RM+  VD +GDG V  E+F +MM
Sbjct: 142 NGDGKISAEEVMSVLWKLG-ERCSLEDCNRMVRAVDADGDGLVNMEEFIKMM 182

[Close]

BLAST of Cla016954 vs. TrEMBL
Match: A0A0A0LFY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823060 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.6e-76
Identity = 149/168 (88.69%), Postives = 154/168 (91.67%), Query Frame = 1


Query: 1   MKLLKSFNPNRLFSSSKSHRSKLSRSQPPSFGSASSSSS---AGTPTSVLPSGVWSDFSD 60
           MKLLKS NPNRLFSS KSHRSKLSRSQPPSFGSASSSSS   AGTPTSVLPS  WSDFSD
Sbjct: 1   MKLLKSLNPNRLFSS-KSHRSKLSRSQPPSFGSASSSSSSSAAGTPTSVLPSLDWSDFSD 60

Query: 61  STLSLKELEALLGLIGAEPPSEEELKIMMGEMDRVGPACHSELRDTFEIFDADRDGRITA 120
            TLS KEL+ALLGLIGAEPPSEEE+KIMMGEMDRVGP CHSELRDTFEIFDAD DGRITA
Sbjct: 61  PTLSRKELKALLGLIGAEPPSEEEIKIMMGEMDRVGPTCHSELRDTFEIFDADHDGRITA 120

Query: 121 EELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 166
           EELFSVF AMGD+ CTLEDC+RMIAGVDKNGDGFVCF+DF RMMDCQR
Sbjct: 121 EELFSVFAAMGDDGCTLEDCQRMIAGVDKNGDGFVCFDDFVRMMDCQR 167

[Close]

BLAST of Cla016954 vs. TrEMBL
Match: M5WA96_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010940mg PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.5e-45
Identity = 119/230 (51.74%), Postives = 140/230 (60.87%), Query Frame = 1


Query: 1   MKLLK----SFNPNRLFSSSKSHRSKLSR--SQPPSF--GSASSSSSA------------ 60
           MKL+K    S +P RLF S K  RS +SR  S P SF  G+ASSSSS+            
Sbjct: 1   MKLIKISSKSLSPKRLFRSKKD-RSAVSRRSSDPLSFESGTASSSSSSSSSSDSLHKPGT 60

Query: 61  -------GTPTSVL--PSGVWSDFS------------------DSTLSLKELEALLGLIG 120
                  GTPTSVL   SG WSDFS                  D  +S KELEALL  +G
Sbjct: 61  GAEAGGIGTPTSVLLERSGDWSDFSTDLQLDMAQAFKLIDRDNDGVVSRKELEALLSRLG 120

Query: 121 AEPPSEEELKIMMGEMDR------------------VGPACHSELRDTFEIFDADRDGRI 166
           A+PPS+EE+ +M+ E+DR                   GPA  SELRD FE+FD+D DG+I
Sbjct: 121 ADPPSQEEVMLMLSEVDREGNGSISLEALLSRVGPVCGPAADSELRDAFEVFDSDHDGKI 180

[Close]

BLAST of Cla016954 vs. TrEMBL
Match: A0A067D4X5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027592mg PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 107/212 (50.47%), Postives = 131/212 (61.79%), Query Frame = 1


Query: 1   MKLLKSFNPNRLF-SSSKSHRSKLSRSQPPSFGSASSSSSA------------GTPTSVL 60
           MKL++  +P RLF S SK  R+ +SRS P SF S+S+S S+            GTPTSVL
Sbjct: 1   MKLIEKLSPKRLFRSKSKKDRTSVSRSDPSSFSSSSTSDSSTHNKLGSAPDRVGTPTSVL 60

Query: 61  P--SGVWSDFS----------------------DSTLSLKELEALLGLIGAEPPSEEELK 120
              SG WSD S                      D  +   ELEALL  +GA+PP++EE+K
Sbjct: 61  HEISGDWSDMSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVK 120

Query: 121 IMMGEMDRVG----------PACHSELRDTFEIFDADRDGRITAEELFSVFTAMGDERCT 166
            M+ E+DR G          PAC  EL++TF+ FDAD DG+ITAEELF VFT +GDE CT
Sbjct: 121 SMLSEVDREGDGRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVFTKLGDELCT 180

[Close]

BLAST of Cla016954 vs. TrEMBL
Match: B9IHU8_POPTR (Calmodulin-like family protein OS=Populus trichocarpa GN=POPTR_0016s04040g PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-42
Identity = 108/217 (49.77%), Postives = 130/217 (59.91%), Query Frame = 1


Query: 1   MKLLKSFNPNRLFSSSKSHRSKLSRSQPPSFGSASSSSSAG------------------- 60
           M+L+K  +P R FSS K  RS+LSRS+P SF S ++SS A                    
Sbjct: 1   MQLIKKLSPKRWFSSKKD-RSELSRSEPSSFSSGTASSDASDSSISNVKANSAAANAGFR 60

Query: 61  TPTSVLP--SGVWSDFS------------------DSTLSLKELEALLGLIGAEPPSEEE 120
           TPTSVLP  SG WSD S                  D  +S  ELEALL  +GAEPPS +E
Sbjct: 61  TPTSVLPQISGDWSDMSTDFYFELTQAFKVIDRDNDGLVSRNELEALLTRLGAEPPSSQE 120

Query: 121 LKIMMGEMD---------RVGPACH----SELRDTFEIFDADRDGRITAEELFSVFTAMG 166
           + +M+GE+D         R+G AC      ELRD F  FD+DRDG+ITAEEL +V+ A G
Sbjct: 121 MAVMLGEVDLISVEELASRLGSACEPAGGDELRDAFVFFDSDRDGKITAEELLNVYKAFG 180

[Close]

BLAST of Cla016954 vs. TrEMBL
Match: V4SC13_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005842mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.7e-42
Identity = 108/221 (48.87%), Postives = 132/221 (59.73%), Query Frame = 1


Query: 1   MKLLKSFNPNRLF-SSSKSHRSKLSRSQPPSFGSASSSSSA------------GTPTSVL 60
           MKL++  +P RLF S SK  R+ +SRS P SF S+S+S S+            GTPTSVL
Sbjct: 1   MKLIEKLSPKRLFRSKSKKDRTSVSRSDPSSFSSSSTSDSSTHNKLGSAPDRVGTPTSVL 60

Query: 61  P--SGVWSDFS----------------------DSTLSLKELEALLGLIGAEPPSEEELK 120
              SG WSD S                      D  +   ELEALL  +GA+PP++EE+K
Sbjct: 61  HEISGDWSDMSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVK 120

Query: 121 IMMGEMDR--------------VG-----PACHSELRDTFEIFDADRDGRITAEELFSVF 166
            M+ E+DR              VG     PAC  EL++TF+ FDAD DG+ITAEELF VF
Sbjct: 121 SMLSEVDREGDGYIPLEALISRVGNSSCEPACEPELKETFDFFDADHDGKITAEELFGVF 180

[Close]

BLAST of Cla016954 vs. NCBI nr
Match: gi|659085286|ref|XP_008443339.1| (PREDICTED: probable calcium-binding protein CML35 [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-78
Identity = 154/169 (91.12%), Postives = 158/169 (93.49%), Query Frame = 1


Query: 1   MKLLKSFNPNRLFSSSKSHRSKLSRSQPPSFGSASSS----SSAGTPTSVLPSGVWSDFS 60
           MKLLKSFNPNRLFSS KSHRSKLSRSQPPSFGSASSS    SSAGTPTSVLPS  W+DFS
Sbjct: 66  MKLLKSFNPNRLFSS-KSHRSKLSRSQPPSFGSASSSSSSTSSAGTPTSVLPSLDWADFS 125

Query: 61  DSTLSLKELEALLGLIGAEPPSEEELKIMMGEMDRVGPACHSELRDTFEIFDADRDGRIT 120
           D TLS KEL+ALLGLIGAEPPSEEE+KIMMGEMDRVGPACHSELRDTFEIFDAD DGRIT
Sbjct: 126 DPTLSRKELKALLGLIGAEPPSEEEIKIMMGEMDRVGPACHSELRDTFEIFDADHDGRIT 185

Query: 121 AEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 166
           AEELFSVFTAMGDE CTLEDCRRMIAGVDKNGDGFVCF+DFARMMDCQR
Sbjct: 186 AEELFSVFTAMGDEGCTLEDCRRMIAGVDKNGDGFVCFDDFARMMDCQR 233

[Close]

BLAST of Cla016954 vs. NCBI nr
Match: gi|778685391|ref|XP_004136671.2| (PREDICTED: probable calcium-binding protein CML35 [Cucumis sativus])

HSP 1 Score: 292.4 bits (747), Expect = 5.1e-76
Identity = 149/168 (88.69%), Postives = 154/168 (91.67%), Query Frame = 1


Query: 1   MKLLKSFNPNRLFSSSKSHRSKLSRSQPPSFGSASSSSS---AGTPTSVLPSGVWSDFSD 60
           MKLLKS NPNRLFSS KSHRSKLSRSQPPSFGSASSSSS   AGTPTSVLPS  WSDFSD
Sbjct: 1   MKLLKSLNPNRLFSS-KSHRSKLSRSQPPSFGSASSSSSSSAAGTPTSVLPSLDWSDFSD 60

Query: 61  STLSLKELEALLGLIGAEPPSEEELKIMMGEMDRVGPACHSELRDTFEIFDADRDGRITA 120
            TLS KEL+ALLGLIGAEPPSEEE+KIMMGEMDRVGP CHSELRDTFEIFDAD DGRITA
Sbjct: 61  PTLSRKELKALLGLIGAEPPSEEEIKIMMGEMDRVGPTCHSELRDTFEIFDADHDGRITA 120

Query: 121 EELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 166
           EELFSVF AMGD+ CTLEDC+RMIAGVDKNGDGFVCF+DF RMMDCQR
Sbjct: 121 EELFSVFAAMGDDGCTLEDCQRMIAGVDKNGDGFVCFDDFVRMMDCQR 167

[Close]

BLAST of Cla016954 vs. NCBI nr
Match: gi|645271060|ref|XP_008240735.1| (PREDICTED: probable calcium-binding protein CML36 [Prunus mume])

HSP 1 Score: 193.4 bits (490), Expect = 3.2e-46
Identity = 117/230 (50.87%), Postives = 140/230 (60.87%), Query Frame = 1


Query: 1   MKLLK----SFNPNRLFSSSKSHRSKLSR--SQPPSFGSASSSSSAG------------- 60
           MKL+K    S +P  LF S K  RS +SR  S PPSFGS ++SSS+              
Sbjct: 1   MKLIKISSKSLSPKHLFRSKKD-RSAVSRRSSDPPSFGSGTASSSSSSSSSSDSLHKPGT 60

Query: 61  --------TPTSVLP--SGVWSDFS------------------DSTLSLKELEALLGLIG 120
                   TPTSVLP  SG WSDFS                  D  +S KELEALL  +G
Sbjct: 61  GAEAGGIRTPTSVLPERSGDWSDFSTDLQLDMAQAFKLIDRDNDGVVSRKELEALLSRLG 120

Query: 121 AEPPSEEELKIMMGEMDR------------------VGPACHSELRDTFEIFDADRDGRI 166
           A+PPS+EE+ +M+ E+DR                   GPA  SELRD F++FD+D DG+I
Sbjct: 121 ADPPSQEEVMLMLSEVDREGNGSITLDALLNRVGPVCGPAADSELRDAFKVFDSDHDGKI 180

[Close]

BLAST of Cla016954 vs. NCBI nr
Match: gi|470135628|ref|XP_004303614.1| (PREDICTED: probable calcium-binding protein CML36 [Fragaria vesca subsp. vesca])

HSP 1 Score: 192.2 bits (487), Expect = 7.2e-46
Identity = 116/212 (54.72%), Postives = 137/212 (64.62%), Query Frame = 1


Query: 1   MKLLK--SFNPNRLFSSSKSHRSKLSRSQPPSFGSASSSSS-----------AGTPTSVL 60
           MKL+K  S +P RLF S K  RS +SRS PPSFGS ++SSS           A TPTSVL
Sbjct: 1   MKLMKINSLSPKRLFRSKKD-RSAVSRSDPPSFGSGTASSSSSDSLHKPGGPAATPTSVL 60

Query: 61  PSGVWSDFS---------------DSTLSLKELEALLG-LIGAEPPSEEELKIMMGEMD- 120
           P G WS+FS               D  +S  ELEALL  L+GAEPP++EE+ +M+ E+D 
Sbjct: 61  P-GDWSEFSSVDMAQAFRLIDRDNDGVVSRTELEALLKRLLGAEPPTQEEVAMMLSEVDG 120

Query: 121 -------------RVGPACH----SELRDTFEIFDADRDGRITAEELFSVFTAMGDERCT 166
                        R GP C     SELR+ FE+FD D DG+I+AEEL SVFTA+GDERCT
Sbjct: 121 DGDGCIPLEALLHRFGPGCEPAADSELREAFEVFDTDHDGKISAEELLSVFTAIGDERCT 180

[Close]

BLAST of Cla016954 vs. NCBI nr
Match: gi|595806938|ref|XP_007202521.1| (hypothetical protein PRUPE_ppa010940mg [Prunus persica])

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 119/230 (51.74%), Postives = 140/230 (60.87%), Query Frame = 1


Query: 1   MKLLK----SFNPNRLFSSSKSHRSKLSR--SQPPSF--GSASSSSSA------------ 60
           MKL+K    S +P RLF S K  RS +SR  S P SF  G+ASSSSS+            
Sbjct: 1   MKLIKISSKSLSPKRLFRSKKD-RSAVSRRSSDPLSFESGTASSSSSSSSSSDSLHKPGT 60

Query: 61  -------GTPTSVL--PSGVWSDFS------------------DSTLSLKELEALLGLIG 120
                  GTPTSVL   SG WSDFS                  D  +S KELEALL  +G
Sbjct: 61  GAEAGGIGTPTSVLLERSGDWSDFSTDLQLDMAQAFKLIDRDNDGVVSRKELEALLSRLG 120

Query: 121 AEPPSEEELKIMMGEMDR------------------VGPACHSELRDTFEIFDADRDGRI 166
           A+PPS+EE+ +M+ E+DR                   GPA  SELRD FE+FD+D DG+I
Sbjct: 121 ADPPSQEEVMLMLSEVDREGNGSISLEALLSRVGPVCGPAADSELRDAFEVFDSDHDGKI 180

The following BLAST results are available for this feature:

BLAST of Cla016954 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CML35_ARATH	4.5e-32	43.54	Probable calcium-binding protein CML35 OS=Arabidopsis thaliana GN=CML35 PE=2 SV=...	[more]
CML36_ARATH	2.2e-31	44.81	Probable calcium-binding protein CML36 OS=Arabidopsis thaliana GN=CML36 PE=2 SV=...	[more]
CML25_ARATH	3.9e-15	39.52	Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=...	[more]
CML16_ORYSJ	4.7e-13	42.19	Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica GN=CML16 ...	[more]
CML1_ARATH	6.2e-13	33.72	Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1	[more]

BLAST of Cla016954 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFY7_CUCSA	3.6e-76	88.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823060 PE=4 SV=1	[more]
M5WA96_PRUPE	9.5e-45	51.74	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010940mg PE=4 SV=1	[more]
A0A067D4X5_CITSI	1.4e-43	50.47	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027592mg PE=4 SV=1	[more]
B9IHU8_POPTR	1.2e-42	49.77	Calmodulin-like family protein OS=Populus trichocarpa GN=POPTR_0016s04040g PE=4 ...	[more]
V4SC13_9ROSI	5.7e-42	48.87	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005842mg PE=4 SV=1	[more]

BLAST of Cla016954 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085286\|ref\|XP_008443339.1\|	1.4e-78	91.12	PREDICTED: probable calcium-binding protein CML35 [Cucumis melo]	[more]
gi\|778685391\|ref\|XP_004136671.2\|	5.1e-76	88.69	PREDICTED: probable calcium-binding protein CML35 [Cucumis sativus]	[more]
gi\|645271060\|ref\|XP_008240735.1\|	3.2e-46	50.87	PREDICTED: probable calcium-binding protein CML36 [Prunus mume]	[more]
gi\|470135628\|ref\|XP_004303614.1\|	7.2e-46	54.72	PREDICTED: probable calcium-binding protein CML36 [Fragaria vesca subsp. vesca]	[more]
gi\|595806938\|ref\|XP_007202521.1\|	1.4e-44	51.74	hypothetical protein PRUPE_ppa010940mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla016954	Cla016954.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 99..161 score: 2.
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 136..164 score: 0.0022coord: 99..127 score: 2.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 57..75 score: 5.001coord: 95..130 score: 13.035coord: 132..165 score: 11
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 98..161 score: 5.0
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 56..161 score: 2.16
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 145..157 score: -coord: 108..120 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 57..161 score: 3.2
None	No IPR available	PANTHER	PTHR10891:SF605	CALCIUM-BINDING PROTEIN CML25-RELATED	coord: 57..161 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla016954	Cla97C10G198500	Watermelon (97103) v2	wmwmbB051
Cla016954	Csa3G823060	Cucumber (Chinese Long) v2	cuwmB198
Cla016954	MELO3C009818	Melon (DHL92) v3.5.1	mewmB346
Cla016954	ClCG10G015590	Watermelon (Charleston Gray)	wcgwmB051
Cla016954	CSPI03G38420	Wild cucumber (PI 183967)	cpiwmB198
Cla016954	Cucsa.338310	Cucumber (Gy14) v1	cgywmB609
Cla016954	CmaCh14G005570	Cucurbita maxima (Rimu)	cmawmB228
Cla016954	CmoCh14G005610	Cucurbita moschata (Rifu)	cmowmB214
Cla016954	Lsi03G015390	Bottle gourd (USVL1VR-Ls)	lsiwmB240
Cla016954	Cp4.1LG03g08270	Cucurbita pepo (Zucchini)	cpewmB597
Cla016954	CsGy3G035950	Cucumber (Gy14) v2	cgybwmB187
Cla016954	MELO3C009818.2	Melon (DHL92) v3.6.1	medwmB344
Cla016954	Carg09817	Silver-seed gourd	carwmB0431
Cla016954	CsaV3_3G040820	Cucumber (Chinese Long) v3	cucwmB208
Cla016954	Bhi11G002433	Wax gourd	wgowmB014

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla016954	Wax gourd	wgowmB021
Cla016954	Cucurbita maxima (Rimu)	cmawmB786
Cla016954	Cucurbita moschata (Rifu)	cmowmB780
Cla016954	Silver-seed gourd	carwmB0309