Cla016066 (gene) Watermelon (97103) v1

NameCla016066
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr2 : 7056781 .. 7057373 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATAAAAACAGAGATGGAAAACATAGAAGCAGAGGAGGTAGTTTCTCTTTCTCGCATGATAAGTTAATGATATCTTTGTTTAGTATAACAATATCCCTTACAATAATTTGCAATTTTTCATGCATTATACTTAAGGATGAGTCCTTCAAGGATGTTGATACTAAGCCTAAGATGGCCATGAATCCTAGTTGTGATCATGTCTTGACTCGAACATCGGAGAAACCTGAATGCTCTGATCAACCAAAGGGAGAAGGAGGTTTGAGTAAACCCGACACAGGCTTTGACACAACAAAATCTGGTCCTGAACTAGAGAGAATTCAAAAGAACGAAATTGATGAGATGGTTAAAGCGTTATATCGACGTGTTGAGGAGTTGGAAGAGAAAATACGACAACAAAGTCGATTTCCTTCCAATTCCGATTGTGGCAGTTGCAATGAGCAACATTCAGAAGACGAGGTATTGGGGCCTGTTAACAATTGGAACTTGGAAAAGGTGATCACATTCTTTCCCAATTCTTCATCTTTCCAATAGTTTACAAGTCATTTGAATTAATGCTCCCATGTTGTTTCATATATGCAGGACAATTGA

mRNA sequence

ATGAAAATAAAAACAGAGATGGAAAACATAGAAGCAGAGGAGGATGAGTCCTTCAAGGATGTTGATACTAAGCCTAAGATGGCCATGAATCCTAGTTGTGATCATGTCTTGACTCGAACATCGGAGAAACCTGAATGCTCTGATCAACCAAAGGGAGAAGGAGGTTTGAGTAAACCCGACACAGGCTTTGACACAACAAAATCTGGTCCTGAACTAGAGAGAATTCAAAAGAACGAAATTGATGAGATGGTTAAAGCGTTATATCGACGTGTTGAGGAGTTGGAAGAGAAAATACGACAACAAAGTCGATTTCCTTCCAATTCCGATTGTGGCAGTTGCAATGAGCAACATTCAGAAGACGAGGTATTGGGGCCTGTTAACAATTGGAACTTGGAAAAGGACAATTGA

Coding sequence (CDS)

ATGAAAATAAAAACAGAGATGGAAAACATAGAAGCAGAGGAGGATGAGTCCTTCAAGGATGTTGATACTAAGCCTAAGATGGCCATGAATCCTAGTTGTGATCATGTCTTGACTCGAACATCGGAGAAACCTGAATGCTCTGATCAACCAAAGGGAGAAGGAGGTTTGAGTAAACCCGACACAGGCTTTGACACAACAAAATCTGGTCCTGAACTAGAGAGAATTCAAAAGAACGAAATTGATGAGATGGTTAAAGCGTTATATCGACGTGTTGAGGAGTTGGAAGAGAAAATACGACAACAAAGTCGATTTCCTTCCAATTCCGATTGTGGCAGTTGCAATGAGCAACATTCAGAAGACGAGGTATTGGGGCCTGTTAACAATTGGAACTTGGAAAAGGACAATTGA

Protein sequence

MKIKTEMENIEAEEDESFKDVDTKPKMAMNPSCDHVLTRTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEIDEMVKALYRRVEELEEKIRQQSRFPSNSDCGSCNEQHSEDEVLGPVNNWNLEKDN
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla016066Cla016066.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 77..104
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla016066Cla97C02G033440Watermelon (97103) v2wmwmbB317
Cla016066ClCG02G006470Watermelon (Charleston Gray)wcgwmB198
Cla016066Lsi03G005460Bottle gourd (USVL1VR-Ls)lsiwmB268
Cla016066Bhi05G000987Wax gourdwgowmB273
The following gene(s) are paralogous to this gene:

None