ClCG02G006470 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAGGATAATGCAGCTCATGCCACAAATCCTCTCATGAGTGATTACAATCTAAATATTTCTAACACATCTCATATCAAGTTCGATTACAACAGGAGGAAAACACGTGGTCCAACTACAATGCCTGAAATTACTCGATGTAGTAGCCAGGGAGATAGAAAGGTAGTACAGTATAACGACTATGGACAACCAATTGGAGTGAATGCAGCAAAACTGAGGAGTTACATTGGCTCTTGTGTCCATTTCCATGTCCCAATTACTTATGCTACTTGGAAACATGTACCTAACAAGATTAAAGAAAAGATTTTAAAGATGATTCAGGTATAATCCATTTAACTTCTATTTTTGTTATTTTCTTAAATTCTCAAATTGAAGGTAATGGTATATATTATCTTGTATATCTGCAGGCTGGTTTTGTCATTGATGAAAAGGCAAAAAAGTCCATCTTACAAAATGCTGGTAATTCATTCCGTCAATTTAAAAGCTGGTTGACGACTCATTATATTATTCCTTTCAAAAATCAGCCAGATCGATTGGAAAATCCTCCAGATACTTATTCACACATTGAGAGACATCATTGGCACCAATTTGTCAAATCACGATTGAGCGAAGAGTTTCAGGTTTGTAGTCTTATGCTTTTAACTGATAGGCTTCCTAATAATATTCTTTCACTGACATTATTGTGTTGAAGAATTTGAGGACTTTACAAGCACAAAGACGTGCGCAGAACAAATATAATCACCGATTGTCAAGAAAAGGTTATGCTAACTTTCTTGAAGAAATGGTAAGATTGTCTTTTATGGATATAACTACTTACTGATGGTTCTTGTTCTTGTTTGTGTGCCTGTATATGTGAAGGAGACAAATTATTTAACTAATTTTGAACTATTTGAGTGTAGAAAAACAGACATACTATTGAAAAAGCTGCTCAAATGAAAATAAAAACAGAGATGGAAAACATAGAAGCAGAGGAGGTAGTTTCTCTTTCTCGCATGATAAGTTAATGATATCTTTGTTTAGTATAACAATATCCCTTACAATAATTTGCAATTTTTCATGCATTATACTTAAGGATGAGTCCTTCAAGGATGTTGATACTAAGCCTAAGATGGCCATGAATCCTAGTTGTGATCATGTCTTGACTCGAACATCGGAGAAACCTGAATGCTCTGATCAACCAAAGGGAGAAGGAGGTTTGAGTAAACCCGACACAGGCTTTGACACAACAAAATCTGGTCCTGAACTAGAGAGAATTCAAAAGAACGAAATTGATGAGATGGTTAAAGCGTTATATCGACGTGTTGAGGAGTTGGAAGAGAAAATACGACAACAAAGTCGATTTCCTTCCAATTCCGATTGTGGCAGTTGCAATGAGCAACATTCAGAAGACGAGGTATTGGGGCCTGTTAACAATTGGAACTTGGAAAAGGTGATCACATTCTTTCCCAATTCTTCATCTTTCCAATAG ATGGAAAAGGATAATGCAGCTCATGCCACAAATCCTCTCATGAGTGATTACAATCTAAATATTTCTAACACATCTCATATCAAGTTCGATTACAACAGGAGGAAAACACGTGGTCCAACTACAATGCCTGAAATTACTCGATGTAGTAGCCAGGGAGATAGAAAGGTAGTACAGTATAACGACTATGGACAACCAATTGGAGTGAATGCAGCAAAACTGAGGAGTTACATTGGCTCTTGTGTCCATTTCCATGTCCCAATTACTTATGCTACTTGGAAACATGTACCTAACAAGATTAAAGAAAAGATTTTAAAGATGATTCAGAAAAACAGACATACTATTGAAAAAGCTGCTCAAATGAAAATAAAAACAGAGATGGAAAACATAGAAGCAGAGGAGGATGAGTCCTTCAAGGATGTTGATACTAAGCCTAAGATGGCCATGAATCCTAGTTGTGATCATGTCTTGACTCGAACATCGGAGAAACCTGAATGCTCTGATCAACCAAAGGGAGAAGGAGGTTTGAGTAAACCCGACACAGGCTTTGACACAACAAAATCTGGTCCTGAACTAGAGAGAATTCAAAAGAACGAAATTGATGAGATGGTTAAAGCGTTATATCGACGTGTTGAGGAGTTGGAAGAGAAAATACGACAACAAAGTCGATTTCCTTCCAATTCCGATTGTGGCAGTTGCAATGAGCAACATTCAGAAGACGAGGTATTGGGGCCTGTTAACAATTGGAACTTGGAAAAGGTGATCACATTCTTTCCCAATTCTTCATCTTTCCAATAG ATGGAAAAGGATAATGCAGCTCATGCCACAAATCCTCTCATGAGTGATTACAATCTAAATATTTCTAACACATCTCATATCAAGTTCGATTACAACAGGAGGAAAACACGTGGTCCAACTACAATGCCTGAAATTACTCGATGTAGTAGCCAGGGAGATAGAAAGGTAGTACAGTATAACGACTATGGACAACCAATTGGAGTGAATGCAGCAAAACTGAGGAGTTACATTGGCTCTTGTGTCCATTTCCATGTCCCAATTACTTATGCTACTTGGAAACATGTACCTAACAAGATTAAAGAAAAGATTTTAAAGATGATTCAGAAAAACAGACATACTATTGAAAAAGCTGCTCAAATGAAAATAAAAACAGAGATGGAAAACATAGAAGCAGAGGAGGATGAGTCCTTCAAGGATGTTGATACTAAGCCTAAGATGGCCATGAATCCTAGTTGTGATCATGTCTTGACTCGAACATCGGAGAAACCTGAATGCTCTGATCAACCAAAGGGAGAAGGAGGTTTGAGTAAACCCGACACAGGCTTTGACACAACAAAATCTGGTCCTGAACTAGAGAGAATTCAAAAGAACGAAATTGATGAGATGGTTAAAGCGTTATATCGACGTGTTGAGGAGTTGGAAGAGAAAATACGACAACAAAGTCGATTTCCTTCCAATTCCGATTGTGGCAGTTGCAATGAGCAACATTCAGAAGACGAGGTATTGGGGCCTGTTAACAATTGGAACTTGGAAAAGGTGATCACATTCTTTCCCAATTCTTCATCTTTCCAATAG MEKDNAAHATNPLMSDYNLNISNTSHIKFDYNRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQKNRHTIEKAAQMKIKTEMENIEAEEDESFKDVDTKPKMAMNPSCDHVLTRTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEIDEMVKALYRRVEELEEKIRQQSRFPSNSDCGSCNEQHSEDEVLGPVNNWNLEKVITFFPNSSSFQ
BLAST of ClCG02G006470 vs. TrEMBL
Match: A5BSR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027409 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09 Identity = 52/190 (27.37%), Postives = 94/190 (49.47%), Query Frame = 1
BLAST of ClCG02G006470 vs. TrEMBL
Match: Q9ZUQ3_ARATH (En/Spm-like transposon protein OS=Arabidopsis thaliana GN=At2g12220 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.9e-09 Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 1
BLAST of ClCG02G006470 vs. TrEMBL
Match: D7SQ25_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01850 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.9e-09 Identity = 34/90 (37.78%), Postives = 58/90 (64.44%), Query Frame = 1
BLAST of ClCG02G006470 vs. TrEMBL
Match: A0A0A0LAN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G270810 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.9e-09 Identity = 29/71 (40.85%), Postives = 47/71 (66.20%), Query Frame = 1
BLAST of ClCG02G006470 vs. TrEMBL
Match: A5B3H3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034823 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.3e-08 Identity = 53/215 (24.65%), Postives = 96/215 (44.65%), Query Frame = 1
BLAST of ClCG02G006470 vs. NCBI nr
Match: gi|659101935|ref|XP_008451868.1| (PREDICTED: uncharacterized protein LOC103493028 [Cucumis melo]) HSP 1 Score: 94.7 bits (234), Expect = 2.5e-16 Identity = 42/105 (40.00%), Postives = 66/105 (62.86%), Query Frame = 1
BLAST of ClCG02G006470 vs. NCBI nr
Match: gi|778691222|ref|XP_011653243.1| (PREDICTED: uncharacterized protein LOC101213947 [Cucumis sativus]) HSP 1 Score: 92.0 bits (227), Expect = 1.6e-15 Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = 1
BLAST of ClCG02G006470 vs. NCBI nr
Match: gi|659090010|ref|XP_008445784.1| (PREDICTED: uncharacterized protein LOC103488708 [Cucumis melo]) HSP 1 Score: 89.0 bits (219), Expect = 1.4e-14 Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = 1
BLAST of ClCG02G006470 vs. NCBI nr
Match: gi|778691692|ref|XP_011653328.1| (PREDICTED: uncharacterized protein LOC105435199 isoform X2 [Cucumis sativus]) HSP 1 Score: 84.0 bits (206), Expect = 4.4e-13 Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 1
BLAST of ClCG02G006470 vs. NCBI nr
Match: gi|778691681|ref|XP_011653325.1| (PREDICTED: uncharacterized protein LOC105435199 isoform X1 [Cucumis sativus]) HSP 1 Score: 83.2 bits (204), Expect = 7.5e-13 Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |