Cla013645 (gene) Watermelon (97103) v1

Overview
NameCla013645
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr8 : 18052628 .. 18052816 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGGCGGAGGGAGAGGGAAGTTGTAGGGTTAGGGTGCGGAATCACGTTGTGCGCCGTAATTTCACCGGCGTGCGAATTCGCTAGGTCTATACTCACTAAATTACGCCGCCGCCCTAACAATAACACTGGCAGGACTCAGAATAGAGGATTGGAAGAGTGCTCGAGATCACTGGTGAGCGGCTGA

mRNA sequence

ATGGCGAGGCGGAGGGAGAGGGAAGTTGTAGGGTTAGGGTGCGGAATCACGTTGTGCGCCGTAATTTCACCGGCGTGCGAATTCGCTAGGTCTATACTCACTAAATTACGCCGCCGCCCTAACAATAACACTGGCAGGACTCAGAATAGAGGATTGGAAGAGTGCTCGAGATCACTGGTGAGCGGCTGA

Coding sequence (CDS)

ATGGCGAGGCGGAGGGAGAGGGAAGTTGTAGGGTTAGGGTGCGGAATCACGTTGTGCGCCGTAATTTCACCGGCGTGCGAATTCGCTAGGTCTATACTCACTAAATTACGCCGCCGCCCTAACAATAACACTGGCAGGACTCAGAATAGAGGATTGGAAGAGTGCTCGAGATCACTGGTGAGCGGCTGA

Protein sequence

MARRREREVVGLGCGITLCAVISPACEFARSILTKLRRRPNNNTGRTQNRGLEECSRSLVSG
Homology
[Close]
BLAST of Cla013645 vs. TrEMBL
Match: A0A0A0KEA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052660 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.7e-13
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 1 

Query: 1  MARRREREVVGLGCGITLCAVISPACEFARSILTKLRRR--PNNNTGRTQNRGLE-ECSR 58
          M RR+ERE +G+GCG+ LCAVISPACEFAR+ILTKLRRR  PN   G T+N G + ECSR
Sbjct: 1  MVRRKERETLGIGCGVALCAVISPACEFARAILTKLRRRPCPNIYNGSTENCGSQKECSR 60

[Close]
BLAST of Cla013645 vs. NCBI nr
Match: gi|700190887|gb|KGN46091.1| (hypothetical protein Csa_6G052660 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 6.7e-13
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 1 

Query: 1  MARRREREVVGLGCGITLCAVISPACEFARSILTKLRRR--PNNNTGRTQNRGLE-ECSR 58
          M RR+ERE +G+GCG+ LCAVISPACEFAR+ILTKLRRR  PN   G T+N G + ECSR
Sbjct: 1  MVRRKERETLGIGCGVALCAVISPACEFARAILTKLRRRPCPNIYNGSTENCGSQKECSR 60

The following BLAST results are available for this feature:
BLAST of Cla013645 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEA3_CUCSA4.7e-1368.33Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052660 PE=4 SV=1[more]
BLAST of Cla013645 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190887|gb|KGN46091.1|6.7e-1368.33hypothetical protein Csa_6G052660 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013645Cla013645.1mRNA