Cla010975 (gene) Watermelon (97103) v1

NameCla010975
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 ***- F4JLT2_ARATH); contains Interpro domain(s) IPR002625 Smr protein/MutS2 C-terminal
LocationChr1 : 18590579 .. 18592693 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTCCAGCTCTGCCATTCTCCCTCCACCTTCTTCACCGACCACCATTCCCTCTCCAATTCTCTCACTTCTCAACGTAAAACAACTCTCTACAACTCCTCTCGCCTTTTCAAGCTCAATCCCATTCCTCGTCACTCAAAACCATTCCTCCAAATTACCAATGTCTCGCTACAGGAATACGCTCCTCAAGAAACCCACAATCCAACCCCCTCTGATGATGAAATCTCCAAATACCCAGATGGGAAATCCGGTTCCTCGTCCAAAAGCTCCGTTTGGGTGAATCCTAGAAGCCCCAGAGCTTCCAAGCTTCGGAAGCAATCGTACGAAGCCAGGTATACTTCTCTTACGAGAATATCGGAGTCCTTGGACTCTTGTAATCCATGTGAGGAAGATGTTGCTGATGTCTTGAAGGTGATAGGTAGTAACATTTTGGAACAGGATGCTGTTGTAGTGCTGAATAACATGTCGAATTCCCAAACTGCGTTGATTGCTCTTCGCTACTTCCAGGATGTGTTGAAATCAAGTAAACAGACTATATTTTATAATGTGACATTGAAGGTGTTTAGGAAGTGTAGAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGCTTGAGAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCGTTACCAAATAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCCGCGATGATAGATGCCTATGGACGAGCTGGTAATGTTGACATGGCTTTCAGCTTGTATGACCGTGCAAGAACAGAAAACTGGCGTATCGATCCTGCAACATTCTCAACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTGTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACAGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAGACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCACTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCCTTGTTTACAAGGAGATGAAGGAAAAGGGACTGCAGTTAAATGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCTGATGTTGGCTACGTTAATGAGGCTGTTGAAGTTTTTCAAGATATGAAAAGTTCTGGGACTTGCTCACCTGACAGTTGGACTTTTTCTTCCATGATCACCATATATTCCTGCAGTGGAAAAGTATCAGAGGCCGAAGAAATGTTGAATGAGATGGTGGAAGCCGGTTTCGACCCTAATATCTTTGTCTTGACATCACTAATCCAGTGCTACGGGAAAGCCAAACATGTCGATGATGTAGTGAGGACATTCAATCGATTGCTAGAGTTGGGATTAACTCCAGATGATCGATTCTGTGGCTGTCTTCTCAATGTAATTACCCAGACGCCAAAAGAGGAACTTAGTAAGCTGATTGATTGCGTTGAGAGAGCTAATCCAAAACTGGGTTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGAAAAGGAAGGAGATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCCTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGAGTTGGGGCTTACACTTCAGATATACAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAATGACTTAACAAAGGTACTTGAATCCGGGGAGGAACTTCCGCCATTACTTGGAATAAATACTGGACATGGAAAACACAAATATTCAGATAAGGGTATGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAAGGCTCCATTCCATGAGGCTCCAGACAAGGTCGGGTGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAGCTTCACCTGAATTAGTTGCAGCATAG

mRNA sequence

ATGGCATTCCAGCTCTGCCATTCTCCCTCCACCTTCTTCACCGACCACCATTCCCTCTCCAATTCTCTCACTTCTCAACGTAAAACAACTCTCTACAACTCCTCTCGCCTTTTCAAGCTCAATCCCATTCCTCGTCACTCAAAACCATTCCTCCAAATTACCAATGTCTCGCTACAGGAATACGCTCCTCAAGAAACCCACAATCCAACCCCCTCTGATGATGAAATCTCCAAATACCCAGATGGGAAATCCGGTTCCTCGTCCAAAAGCTCCGTTTGGGTGAATCCTAGAAGCCCCAGAGCTTCCAAGCTTCGGAAGCAATCGTACGAAGCCAGGTATACTTCTCTTACGAGAATATCGGAGTCCTTGGACTCTTGTAATCCATGTGAGGAAGATGTTGCTGATGTCTTGAAGGTGATAGGTAGTAACATTTTGGAACAGGATGCTGTTGTAGTGCTGAATAACATGTCGAATTCCCAAACTGCGTTGATTGCTCTTCGCTACTTCCAGGATGTGTTGAAATCAAGTAAACAGACTATATTTTATAATGTGACATTGAAGGTGTTTAGGAAGTGTAGAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGCTTGAGAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCGTTACCAAATAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCCGCGATGATAGATGCCTATGGACGAGCTGGTAATGTTGACATGGCTTTCAGCTTGTATGACCGTGCAAGAACAGAAAACTGGCGTATCGATCCTGCAACATTCTCAACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTGTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACAGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAGACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCACTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCCTTGTTTACAAGGAGATGAAGGAAAAGGGACTGCAGTTAAATGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCTGATGTTGGCTACGTTAATGAGGCTGTTGAAGTTTTTCAAGATATGAAAAGTTCTGGGACTTGCTCACCTGACAGTTGGACTTTTTCTTCCATGATCACCATATATTCCTGCAGTGGAAAAGTATCAGAGGCCGAAGAAATGTTGAATGAGATGGTGGAAGCCGGTTTCGACCCTAATATCTTTGTCTTGACATCACTAATCCAGTGCTACGGGAAAGCCAAACATGTCGATGATGTAGTGAGGACATTCAATCGATTGCTAGAGTTGGGATTAACTCCAGATGATCGATTCTGTGGCTGTCTTCTCAATGTAATTACCCAGACGCCAAAAGAGGAACTTAGTAAGCTGATTGATTGCGTTGAGAGAGCTAATCCAAAACTGGGTTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGAAAAGGAAGGAGATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCCTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGAGTTGGGGCTTACACTTCAGATATACAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAATGACTTAACAAAGGTACTTGAATCCGGGGAGGAACTTCCGCCATTACTTGGAATAAATACTGGACATGGAAAACACAAATATTCAGATAAGGGTATGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAAGGCTCCATTCCATGAGGCTCCAGACAAGGTCGGGTGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAGCTTCACCTGAATTAGTTGCAGCATAG

Coding sequence (CDS)

ATGGCATTCCAGCTCTGCCATTCTCCCTCCACCTTCTTCACCGACCACCATTCCCTCTCCAATTCTCTCACTTCTCAACGTAAAACAACTCTCTACAACTCCTCTCGCCTTTTCAAGCTCAATCCCATTCCTCGTCACTCAAAACCATTCCTCCAAATTACCAATGTCTCGCTACAGGAATACGCTCCTCAAGAAACCCACAATCCAACCCCCTCTGATGATGAAATCTCCAAATACCCAGATGGGAAATCCGGTTCCTCGTCCAAAAGCTCCGTTTGGGTGAATCCTAGAAGCCCCAGAGCTTCCAAGCTTCGGAAGCAATCGTACGAAGCCAGGTATACTTCTCTTACGAGAATATCGGAGTCCTTGGACTCTTGTAATCCATGTGAGGAAGATGTTGCTGATGTCTTGAAGGTGATAGGTAGTAACATTTTGGAACAGGATGCTGTTGTAGTGCTGAATAACATGTCGAATTCCCAAACTGCGTTGATTGCTCTTCGCTACTTCCAGGATGTGTTGAAATCAAGTAAACAGACTATATTTTATAATGTGACATTGAAGGTGTTTAGGAAGTGTAGAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGCTTGAGAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCGTTACCAAATAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCCGCGATGATAGATGCCTATGGACGAGCTGGTAATGTTGACATGGCTTTCAGCTTGTATGACCGTGCAAGAACAGAAAACTGGCGTATCGATCCTGCAACATTCTCAACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTGTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACAGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAGACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCACTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCCTTGTTTACAAGGAGATGAAGGAAAAGGGACTGCAGTTAAATGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCTGATGTTGGCTACGTTAATGAGGCTGTTGAAGTTTTTCAAGATATGAAAAGTTCTGGGACTTGCTCACCTGACAGTTGGACTTTTTCTTCCATGATCACCATATATTCCTGCAGTGGAAAAGTATCAGAGGCCGAAGAAATGTTGAATGAGATGGTGGAAGCCGGTTTCGACCCTAATATCTTTGTCTTGACATCACTAATCCAGTGCTACGGGAAAGCCAAACATGTCGATGATGTAGTGAGGACATTCAATCGATTGCTAGAGTTGGGATTAACTCCAGATGATCGATTCTGTGGCTGTCTTCTCAATGTAATTACCCAGACGCCAAAAGAGGAACTTAGTAAGCTGATTGATTGCGTTGAGAGAGCTAATCCAAAACTGGGTTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGAAAAGGAAGGAGATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCCTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGAGTTGGGGCTTACACTTCAGATATACAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAATGACTTAACAAAGGTACTTGAATCCGGGGAGGAACTTCCGCCATTACTTGGAATAAATACTGGACATGGAAAACACAAATATTCAGATAAGGGTATGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAAGGCTCCATTCCATGAGGCTCCAGACAAGGTCGGGTGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAGCTTCACCTGAATTAGTTGCAGCATAG

Protein sequence

MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQEYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRISESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA
BLAST of Cla010975 vs. Swiss-Prot
Match: PP314_ARATH (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana GN=P67 PE=1 SV=3)

HSP 1 Score: 942.6 bits (2435), Expect = 2.5e-273
Identity = 463/702 (65.95%), Postives = 563/702 (80.20%), Query Frame = 1

Query: 5   LCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQEYAPQ 64
           LC SPS+   D   L N L+   K+T  +    +  N    HS+  LQ T+VS+QE  PQ
Sbjct: 6   LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65

Query: 65  ETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRISESLD 124
              +     D     P     ++SKS VWVNP+SPRAS+LR++SY++RY+SL +++ESLD
Sbjct: 66  SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125

Query: 125 SCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTIFYNV 184
           +C P E DV DV+   G  + EQDAVV LNNM+N +TA + L    + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185

Query: 185 TLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFD 244
           T+KVFRK +D+E +EKLF+EMLERG+KPDN TF+TIISCAR   +P +AVEWFEKM SF 
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245

Query: 245 CNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 304
           C PD+VT +AMIDAYGRAGNVDMA SLYDRARTE WRID  TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305

Query: 305 NVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364
           N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365

Query: 365 GRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPD 424
           GRARYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD  YV+EA E+FQDMK+  TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425

Query: 425 SWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTFN 484
           SWTFSS+IT+Y+CSG+VSEAE  L +M EAGF+P +FVLTS+IQCYGKAK VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485

Query: 485 RLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE-KEGD 544
           ++LELG+TPDDRFCGCLLNV+TQTP EE+ KLI CVE+A PKLG VV++L+ EQ  +EG 
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545

Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRSPTQ 604
           F+ EASEL   + +DV+KAY NCLIDLCVNL+ L++ACE+L+LGL   IY  LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605

Query: 605 WSLYLKGLSLGAALTALHVWINDLTK-VLESGEELPPLLGINTGHGKHKYSDKGMASVFE 664
           WSL+LK LSLGAALTALHVW+NDL++  LESGEE PPLLGINTGHGKHKYSDKG+A+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665

Query: 665 SHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
           SHLKEL APFHEAPDKVGWFLTT VAAK+WLESR S   V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702

BLAST of Cla010975 vs. Swiss-Prot
Match: PP420_ARATH (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.9e-132
Identity = 268/707 (37.91%), Postives = 406/707 (57.43%), Query Frame = 1

Query: 2   AFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQEY 61
           A  +C +P    T  HSL        K +L+  SR  KLN      K    +    +   
Sbjct: 8   AIDVCFNPQNSDTKKHSLF------LKPSLFRQSRSRKLNISCSSLKQPKTLEEEPITTK 67

Query: 62  APQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQ-------SYEARYT 121
            P  +    P      +    +  S  KS VWVNP  P+ S L  Q       SY  +  
Sbjct: 68  TPSLSEQLKPLSATTLRQEQTQILSKPKS-VWVNPTRPKRSVLSLQRQKRSAYSYNPQIK 127

Query: 122 SLTRISESLDSCNPCEE-DVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVL 181
            L   +  L+S    E+ +   +L  I       +A++VLN++   Q       + +   
Sbjct: 128 DLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKS 187

Query: 182 KSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKA 241
               +TIFYNVT+K  R  R  +  E++  EM++ GV+ DN+T+STII+CA+ C+L NKA
Sbjct: 188 LFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKA 247

Query: 242 VEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKI 301
           +EWFE+M      PD+VTYSA++D Y ++G V+   SLY+RA    W+ D   FS + K+
Sbjct: 248 IEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKM 307

Query: 302 HGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPS 361
            G AG+YDG   V +EMK++ +KPN+V+YN+LL+AMGRA +P   ++++ EM++ G +P+
Sbjct: 308 FGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPN 367

Query: 362 WATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQ 421
             T  +L++ YG+AR+  DAL +++EMK K   ++ ILYNTLL MCAD+G   EA  +F 
Sbjct: 368 EKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFN 427

Query: 422 DMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKA 481
           DMK S  C PD++++++M+ IY   GK  +A E+  EM++AG   N+   T L+QC GKA
Sbjct: 428 DMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKA 487

Query: 482 KHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQ-TPKEELSKLIDCVERANPKLGFVVE 541
           K +DDVV  F+  ++ G+ PDDR CGCLL+V+      E+  K++ C+ERAN KL   V 
Sbjct: 488 KRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVN 547

Query: 542 LLLGEQEKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQI 601
           L++ E+ +    + E   + +    + R+ +CNCLID+C   +  ++A ELL LG    +
Sbjct: 548 LIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGL 607

Query: 602 YKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKY 661
           Y  L +++  +WSL ++ LS+GAA TAL  W+  L  +++  EELP L    TG G H++
Sbjct: 608 YPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRF 667

Query: 662 SDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASP 700
           S +G+A+ F  HL++L APF ++ D+ G F+ TK    SWLES+  P
Sbjct: 668 S-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705

BLAST of Cla010975 vs. Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.4e-44
Identity = 150/600 (25.00%), Postives = 279/600 (46.50%), Query Frame = 1

Query: 143 NILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQT--IFYNVTLKVFRKCRDMEGAEK 202
           N++  +AV+        +   +A ++F ++ ++  Q   I +N  L V  +    E A  
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVA-KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 361

Query: 203 LFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYG 262
           LF+EM  R ++ D  +++T++         + A E   +MP     P+ V+YS +ID + 
Sbjct: 362 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 421

Query: 263 RAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLV 322
           +AG  D A +L+   R     +D  +++T++ I+   G  +  L++  EM ++GIK ++V
Sbjct: 422 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 481

Query: 323 IYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEM 382
            YN+LL   G+  +  ++K ++ EM +    P+  TY++L+  Y +    ++A+ +++E 
Sbjct: 482 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 541

Query: 383 KEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGK 442
           K  GL+ +V+LY+ L+      G V  AV +  +M   G  SP+  T++S+I  +  S  
Sbjct: 542 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSAT 601

Query: 443 VSEAEEMLNEMVEAGFDP-NIFVLTSLIQCYGKAKHVDDVVRTFNRLLELGLTPDDRFC- 502
           +  + +  N     G  P +   L++L +  G     + V++ F +L         + C 
Sbjct: 602 MDRSADYSN----GGSLPFSSSALSALTETEG-----NRVIQLFGQLTTESNNRTTKDCE 661

Query: 503 ------GCLLNVITQTPKEEL-------SKLIDCVERA-----------------NPKLG 562
                  C+L V  +  + E+       S +++   R                  N   G
Sbjct: 662 EGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYG 721

Query: 563 FVVELLLGEQEKEGDFRTEASELFSVVS---ADVRKAYCNCLIDLCVNLDLLDKACELLE 622
            V  LL+G++E   +   +A  LF  V+        A+ N L D+  +     +  EL+ 
Sbjct: 722 VVHGLLMGQRE---NVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFG-QKRGAELVA 781

Query: 623 L-GLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGIN 682
           L G + Q+++++ S S     L L  +S GAA   +H W+ ++  ++  G ELP +L I 
Sbjct: 782 LEGRSRQVWENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSIL 841

Query: 683 TGHGKHK--YSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELV 703
           TG GKH     D  +    E  L+ + APFH +   +G F ++     +WL   A+ +L+
Sbjct: 842 TGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLL 882


HSP 2 Score: 121.7 bits (304), Expect = 3.2e-26
Identity = 93/385 (24.16%), Postives = 172/385 (44.68%), Query Frame = 1

Query: 117 TRISESLDSCNPCEEDVA----DVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDV 176
           T I   L + N C++ V      V +    N   + A  +++ +       IA R F+  
Sbjct: 200 TYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETA 259

Query: 177 LKSSKQTIFY--NVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLP 236
                    Y  +  +  + +    E A  +F  M E G++P+ VT++ +I       + 
Sbjct: 260 FAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME 319

Query: 237 NKAV-EWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST 296
            K V ++F++M      PD +T+++++    R G  + A +L+D         D  +++T
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379

Query: 297 MIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNG 356
           ++      G  D    +  +M    I PN+V Y++++D   +A R  +   ++ EM   G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439

Query: 357 FSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAV 416
            +    +Y +LL  Y +    E+AL + +EM   G++ +V+ YN LL      G  +E  
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499

Query: 417 EVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQC 476
           +VF +MK      P+  T+S++I  YS  G   EA E+  E   AG   ++ + ++LI  
Sbjct: 500 KVFTEMKREHVL-PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 559

Query: 477 YGKAKHVDDVVRTFNRLLELGLTPD 495
             K   V   V   + + + G++P+
Sbjct: 560 LCKNGLVGSAVSLIDEMTKEGISPN 583


HSP 3 Score: 112.1 bits (279), Expect = 2.5e-23
Identity = 88/338 (26.04%), Postives = 154/338 (45.56%), Query Frame = 1

Query: 253 SAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKA 312
           SAMI   GR G V +A  +++ A    +      FS +I  +G +G ++  ++V+  MK 
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 313 IGIKPNLVIYNSLLDAMGRAKRPW-QIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGE 372
            G++PNLV YN+++DA G+    + Q+   + EM +NG  P   T+ SLL    R    E
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356

Query: 373 DALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSM 432
            A  ++ EM  + ++ +V  YNTLL      G ++ A E+   M       P+  ++S++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK-RIMPNVVSYSTV 416

Query: 433 ITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTFNRLLELGL 492
           I  ++ +G+  EA  +  EM   G   +     +L+  Y K    ++ +     +  +G+
Sbjct: 417 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 476

Query: 493 TPDDRFCGCLLNVITQTPK-EELSKLIDCVERANPKLGFVVELLLGEQEKEGDFRTEASE 552
             D      LL    +  K +E+ K+   ++R +     +    L +   +G    EA E
Sbjct: 477 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 536

Query: 553 LF-SVVSADVRK--AYCNCLIDLCVNLDLLDKACELLE 586
           +F    SA +R      + LID      L+  A  L++
Sbjct: 537 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 573

BLAST of Cla010975 vs. Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.1e-38
Identity = 88/319 (27.59%), Postives = 162/319 (50.78%), Query Frame = 1

Query: 176 SKQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVE 235
           S   + YN  L V+ K    + A K+  EM+  G  P  VT++++IS      + ++A+E
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME 370

Query: 236 WFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHG 295
              +M      PD  TY+ ++  + RAG V+ A S+++  R    + +  TF+  IK++G
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYG 430

Query: 296 VAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWA 355
             G +   + +++E+   G+ P++V +N+LL   G+     ++  ++KEM + GF P   
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490

Query: 356 TYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDM 415
           T+ +L+ AY R    E A+ VY+ M + G+  ++  YNT+LA  A  G   ++ +V  +M
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550

Query: 416 KSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKH 475
           +  G C P+  T+ S++  Y+   ++     +  E+     +P   +L +L+    K   
Sbjct: 551 E-DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 610

Query: 476 VDDVVRTFNRLLELGLTPD 495
           + +  R F+ L E G +PD
Sbjct: 611 LPEAERAFSELKERGFSPD 628


HSP 2 Score: 160.2 bits (404), Expect = 8.1e-38
Identity = 100/350 (28.57%), Postives = 176/350 (50.29%), Query Frame = 1

Query: 164 IALRYFQDVLKSSK-QTIFYNVTLKVFRKCRDMEG----AEKLFEEMLERGVKPDNVTFS 223
           +ALR F   +K    Q++  N  + +       EG    A  +F  + E G   D  +++
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212

Query: 224 TIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNV-DMAFSLYDRART 283
           ++IS         +AV  F+KM    C P  +TY+ +++ +G+ G   +   SL ++ ++
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272

Query: 284 ENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQ 343
           +    D  T++T+I        +     V+EEMKA G   + V YN+LLD  G++ RP +
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332

Query: 344 IKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLA 403
              +  EM+ NGFSPS  TY SL+ AY R    ++A+ +  +M EKG + +V  Y TLL+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392

Query: 404 MCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFD 463
                G V  A+ +F++M+++G C P+  TF++ I +Y   GK +E  ++ +E+   G  
Sbjct: 393 GFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 452

Query: 464 PNIFVLTSLIQCYGKAKHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQ 508
           P+I    +L+  +G+     +V   F  +   G  P+      L++  ++
Sbjct: 453 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501


HSP 3 Score: 137.9 bits (346), Expect = 4.3e-31
Identity = 81/289 (28.03%), Postives = 148/289 (51.21%), Query Frame = 1

Query: 180 IFYNVTLKVFRKC-RDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFE 239
           I YNV L VF K          L E+M   G+ PD  T++T+I+C +  SL  +A + FE
Sbjct: 244 ITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFE 303

Query: 240 KMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAG 299
           +M +   + D VTY+A++D YG++     A  + +      +     T++++I  +   G
Sbjct: 304 EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDG 363

Query: 300 NYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYA 359
             D  + +  +M   G KP++  Y +LL    RA +     +I++EM   G  P+  T+ 
Sbjct: 364 MLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFN 423

Query: 360 SLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSS 419
           + ++ YG      + + ++ E+   GL  +++ +NTLLA+    G  +E   VF++MK +
Sbjct: 424 AFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483

Query: 420 GTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLI 468
           G   P+  TF+++I+ YS  G   +A  +   M++AG  P++    +++
Sbjct: 484 GFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531


HSP 4 Score: 137.1 bits (344), Expect = 7.3e-31
Identity = 98/362 (27.07%), Postives = 165/362 (45.58%), Query Frame = 1

Query: 136 VLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTIFYNVTLKVFRKCRDM 195
           +L V G +   ++A+ VLN M         L  F      S   + YN  +  + +   +
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEM--------VLNGF------SPSIVTYNSLISAYARDGML 379

Query: 196 EGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAM 255
           + A +L  +M E+G KPD  T++T++S          A+  FE+M +  C P+  T++A 
Sbjct: 380 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 439

Query: 256 IDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGI 315
           I  YG  G       ++D         D  T++T++ + G  G       V++EMK  G 
Sbjct: 440 IKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 499

Query: 316 KPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALL 375
            P    +N+L+ A  R     Q  T+Y+ M+  G +P  +TY ++L A  R    E +  
Sbjct: 500 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 559

Query: 376 VYKEMKEKGLQLNVILYNTLLAMCA---DVGYVNE-AVEVFQDMKSSGTCSPDSWTFSSM 435
           V  EM++   + N + Y +LL   A   ++G ++  A EV+     SG   P +    ++
Sbjct: 560 VLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY-----SGVIEPRAVLLKTL 619

Query: 436 ITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTFNRLLELGL 494
           + + S    + EAE   +E+ E GF P+I  L S++  YG+ + V       + + E G 
Sbjct: 620 VLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF 662


HSP 5 Score: 129.8 bits (325), Expect = 1.2e-28
Identity = 84/322 (26.09%), Postives = 150/322 (46.58%), Query Frame = 1

Query: 174 KSSKQTIF-YNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNK 233
           K +K  +F Y   L  F +   +E A  +FEEM   G KP+  TF+  I          +
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437

Query: 234 AVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIK 293
            ++ F+++     +PD VT++ ++  +G+ G       ++   +   +  +  TF+T+I 
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497

Query: 294 IHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSP 353
            +   G+++  + VY  M   G+ P+L  YN++L A+ R     Q + +  EM      P
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557

Query: 354 SWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVF 413
           +  TY SLL AY   +       + +E+    ++   +L  TL+ +C+    + EA   F
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617

Query: 414 QDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGK 473
            ++K  G  SPD  T +SM++IY     V++A  +L+ M E GF P++    SL+  + +
Sbjct: 618 SELKERG-FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 677

Query: 474 AKHVDDVVRTFNRLLELGLTPD 495
           +            +L  G+ PD
Sbjct: 678 SADFGKSEEILREILAKGIKPD 698


HSP 6 Score: 110.9 bits (276), Expect = 5.6e-23
Identity = 74/313 (23.64%), Postives = 147/313 (46.96%), Query Frame = 1

Query: 182 YNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMP 241
           +N  +K++          K+F+E+   G+ PD VT++T+++      + ++    F++M 
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481

Query: 242 SFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYD 301
                P+  T++ +I AY R G+ + A ++Y R        D +T++T++      G ++
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541

Query: 302 GCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLL 361
               V  EM+    KPN + Y SLL A    K    + ++ +E+      P      +L+
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601

Query: 362 RAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTC 421
               +     +A   + E+KE+G   ++   N+++++      V +A  V   MK  G  
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF- 661

Query: 422 SPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVR 481
           +P   T++S++ ++S S    ++EE+L E++  G  P+I    ++I  Y +   + D  R
Sbjct: 662 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 721

Query: 482 TFNRLLELGLTPD 495
            F+ +   G+ PD
Sbjct: 722 IFSEMRNSGIVPD 733


HSP 7 Score: 100.1 bits (248), Expect = 1.0e-19
Identity = 76/343 (22.16%), Postives = 156/343 (45.48%), Query Frame = 1

Query: 176 SKQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVE 235
           S   + +N  L VF +         +F+EM   G  P+  TF+T+IS    C    +A+ 
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510

Query: 236 WFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHG 295
            + +M      PD  TY+ ++ A  R G  + +  +   A  E+ R  P   +    +H 
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL--AEMEDGRCKPNELTYCSLLHA 570

Query: 296 VA-GNYDGCL-NVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPS 355
            A G   G + ++ EE+ +  I+P  V+  +L+    +     + +  + E+ + GFSP 
Sbjct: 571 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 630

Query: 356 WATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQ 415
             T  S++  YGR +    A  V   MKE+G   ++  YN+L+ M +      ++ E+ +
Sbjct: 631 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 690

Query: 416 DMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKA 475
           ++ + G   PD  +++++I  Y  + ++ +A  + +EM  +G  P++    + I  Y   
Sbjct: 691 EILAKG-IKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 750

Query: 476 KHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKL 517
              ++ +     +++ G  P+      +++   +  +++ +KL
Sbjct: 751 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKL 790

BLAST of Cla010975 vs. Swiss-Prot
Match: PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 9.0e-37
Identity = 134/567 (23.63%), Postives = 242/567 (42.68%), Query Frame = 1

Query: 135 DVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTIFYNVTLKVFRKCRD 194
           + L+ +G  I    A  VL  M++   AL    + +           Y   +    + + 
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379

Query: 195 MEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSA 254
                KL +EM+  G +P+ VT++ +I      +  N+A+  F +M    C PD VTY  
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439

Query: 255 MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIG 314
           +ID + +AG +D+A  +Y R +      D  T+S +I   G AG+      ++ EM   G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499

Query: 315 IKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDAL 374
             PNLV YN ++D   +A+       +Y++M   GF P   TY+ ++   G   Y E+A 
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559

Query: 375 LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITI 434
            V+ EM++K    +  +Y  L+ +    G V +A + +Q M  +G   P+  T +S+++ 
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG-LRPNVPTCNSLLST 619

Query: 435 YSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCY--GKAKHVDDVVRTFNRLLELGLT 494
           +    K++EA E+L  M+  G  P++   T L+ C   G++K            L++G  
Sbjct: 620 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK------------LDMG-- 679

Query: 495 PDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEKEGDFRTEASELF 554
               FCG L+                     +P   F++++     + E + R  A+   
Sbjct: 680 ----FCGQLM-----------------ASTGHPAHMFLLKMPAAGPDGE-NVRNHANNFL 739

Query: 555 SVVSADVR---KAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKD-LQSRSPTQWSLYL 614
            ++ ++ R   +   + ++D        ++A  + E+     ++ D L+ +S + W + L
Sbjct: 740 DLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINL 799

Query: 615 KGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHK--YSDKGMASVFESHLK 674
             +S G A+TAL   +    K + +    P  + I TG G+         +    E  L 
Sbjct: 800 HVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLN 849

Query: 675 ELKAPFHEAPDKVGWFLTTKVAAKSWL 694
              +PF       G F+ +      WL
Sbjct: 860 IFGSPFFTESGNSGCFVGSGEPLNRWL 849

BLAST of Cla010975 vs. TrEMBL
Match: A0A0A0LVP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G173140 PE=4 SV=1)

HSP 1 Score: 1327.0 bits (3433), Expect = 0.0e+00
Identity = 654/704 (92.90%), Postives = 679/704 (96.45%), Query Frame = 1

Query: 1   MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SP TFFT+HH LSNSLT QRKTTL NSS LFKL+PIPRHSKPFLQITNVSLQE
Sbjct: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60

Query: 61  YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 120
           +APQ+T N  PS DEISKYPD KSGSSS SSVWVNPRSPRASKLRKQSYEARY SL R+S
Sbjct: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120

Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 180
           ESLDS NPCE DVADVLKVIG+NILE+DA++VLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
           FYNVTLKVFRKCRDMEGAEKLFEEM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
           LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420

Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 540
           RTFN+L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 600
           EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 660
           PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
           FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

BLAST of Cla010975 vs. TrEMBL
Match: A0A061GPA6_THECC (Pentatricopeptide (PPR) repeat-containing protein OS=Theobroma cacao GN=TCM_030422 PE=4 SV=1)

HSP 1 Score: 1082.0 bits (2797), Expect = 0.0e+00
Identity = 523/701 (74.61%), Postives = 622/701 (88.73%), Query Frame = 1

Query: 5   LCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQEYAPQ 64
           LC SPS+ F D H+LS S   +   +   S RL   +     SK  +QI++VSLQ+   Q
Sbjct: 6   LCSSPSSVFHDRHTLSASPKPRPARSTAPSLRLVSCS---FQSKSSIQISHVSLQDPITQ 65

Query: 65  ETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRISESLD 124
             + P  S+   S+ PDGK+GSSSKS VWVNPRSPRAS+LR+ SY++RY+SL +++E+LD
Sbjct: 66  TKNTPKHSN---SQSPDGKTGSSSKSYVWVNPRSPRASRLRQLSYDSRYSSLVKVAETLD 125

Query: 125 SCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLK-SSKQTIFYN 184
           SCNP E DV  VL  +G+++LEQDAVVVLNNMSN  TAL+AL +FQ +LK +S++ I YN
Sbjct: 126 SCNPNEHDVLSVLSRLGNDVLEQDAVVVLNNMSNPHTALLALNHFQRILKKTSREVILYN 185

Query: 185 VTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 244
           VT+KVFRK +D++GAEKLF+EML++GVKPDNVTFST+ISCAR+C+LP+KAVEWFEKMP +
Sbjct: 186 VTMKVFRKSKDLDGAEKLFDEMLQKGVKPDNVTFSTLISCARVCALPDKAVEWFEKMPIY 245

Query: 245 DCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGC 304
            C+PDDVTYSAMIDAYGRAGNVDMAF+LYDRARTE WRIDP TFST+IKI+G++GNYDGC
Sbjct: 246 GCDPDDVTYSAMIDAYGRAGNVDMAFNLYDRARTEKWRIDPVTFSTLIKIYGISGNYDGC 305

Query: 305 LNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRA 364
           LNVYEEMKA+G KPN+VIYN+LLDAMGRAKRPWQ KTIYKEM  NGFSP+WATYA+LLRA
Sbjct: 306 LNVYEEMKALGAKPNVVIYNTLLDAMGRAKRPWQAKTIYKEMTNNGFSPNWATYAALLRA 365

Query: 365 YGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSP 424
           YGRARYGEDAL +YKEMK+KGL+L VILYNTLLAMCADVGY +EAVE+F+DMK+SGTC P
Sbjct: 366 YGRARYGEDALNIYKEMKDKGLELTVILYNTLLAMCADVGYADEAVEIFEDMKNSGTCKP 425

Query: 425 DSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTF 484
           DSWT+SS+ITIYSCSGKVSEAE +++EM+EAGF+PNIFVLTSLIQCYGKA+H DDVVRTF
Sbjct: 426 DSWTYSSLITIYSCSGKVSEAEGIVDEMLEAGFEPNIFVLTSLIQCYGKAQHTDDVVRTF 485

Query: 485 NRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEKEGD 544
           NR+LELG+TPDDRFCGCLLNV+TQTP+EEL+KL DC+++ANPKLG VV+LL+ EQ+ +G+
Sbjct: 486 NRVLELGITPDDRFCGCLLNVMTQTPREELAKLTDCIKKANPKLGHVVKLLVEEQDGQGN 545

Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRSPTQ 604
           F+ EASELF+ + +DV+KAYCNCLIDLCVNLDLL++ACELLELGL+L+IY D+QSRSPTQ
Sbjct: 546 FKNEASELFNCIGSDVKKAYCNCLIDLCVNLDLLERACELLELGLSLEIYADVQSRSPTQ 605

Query: 605 WSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASVFES 664
           WSL LK LSLGAALT+LHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+A+VFES
Sbjct: 606 WSLNLKSLSLGAALTSLHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLATVFES 665

Query: 665 HLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
           HLKEL APFHEAPDKVGWFLTT+VAAKSWLESR+SP+LVAA
Sbjct: 666 HLKELDAPFHEAPDKVGWFLTTQVAAKSWLESRSSPDLVAA 700

BLAST of Cla010975 vs. TrEMBL
Match: F6HCW3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0194g00270 PE=4 SV=1)

HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 522/704 (74.15%), Postives = 605/704 (85.94%), Query Frame = 1

Query: 1   MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYN-SSRLFKLNPIPRHSKPFLQITNVSLQ 60
           MA+ LC SPS+   DHH L NSL+  RK+ L + +S  FK N +  HS+ FLQIT+VSL+
Sbjct: 1   MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLHSRTFLQITHVSLE 60

Query: 61  EYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRI 120
           +  PQET     S+   S+ PD K+    KS +WVNPRSPRASKLR+ SY+ARY SL +I
Sbjct: 61  DPIPQETQKADASNPPNSQDPDRKT----KSYIWVNPRSPRASKLRQHSYDARYASLVKI 120

Query: 121 SESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQT 180
           +ESLDSC   EEDV+ VL+ +G  ILEQDAV+VLNNM+N +TAL+A  +F+  LK S++ 
Sbjct: 121 AESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSREV 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
           I YNVTLKVFRKCR+++ AEKLF+EMLERGVKPDN+TFSTIISCAR+ SLPNKAVEWFEK
Sbjct: 181 ILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEK 240

Query: 241 MPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
           MP F C+PDDVTYSAMIDAYGRAGNVDMA  LYDRARTE WRIDP TFST+I+I+G++GN
Sbjct: 241 MPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGN 300

Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
           +DGCLNVYEEMKA+G+KPNLVIYN+LLDAMGRAKRPWQ K IYKEM  NG  PSW TYA+
Sbjct: 301 FDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAA 360

Query: 361 LLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSG 420
           LLRAYGRARY EDAL+VYKEMKEKGL+L+V+LYNTLLAMCADVGY  EA  +F+DMKSSG
Sbjct: 361 LLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSG 420

Query: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDV 480
            C PDSWTFSS+ITIYSCSGKVSEAE MLN M+EAGF+PNIFVLTSLIQCYGKA   D+V
Sbjct: 421 NCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEV 480

Query: 481 VRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE 540
           VRTF+RLLEL +TPDDRFCGC+LNV+TQ+PKEEL KLIDC+++ANPKLG VV+LLL EQ 
Sbjct: 481 VRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKLIDCIDKANPKLGNVVKLLLEEQN 540

Query: 541 KEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSR 600
            EG FR EASELF  +SADV+KAYCNCLIDLCVNL+LL+KACEL +LGLTL+IY D+QS+
Sbjct: 541 GEGTFRKEASELFDSISADVKKAYCNCLIDLCVNLNLLEKACELFDLGLTLEIYIDIQSK 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMAS 660
           SPTQWSL+LK LSLGAALTALH+W+NDL+K +E GEELP +LGINTGHGKHKYSDKG+AS
Sbjct: 601 SPTQWSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHKYSDKGLAS 660

Query: 661 VFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVA 704
           VFESHLKEL APFHEAPDKVGWFLTTKVAA SWLESR++PELVA
Sbjct: 661 VFESHLKELNAPFHEAPDKVGWFLTTKVAATSWLESRSAPELVA 700

BLAST of Cla010975 vs. TrEMBL
Match: A5B4A6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001456 PE=4 SV=1)

HSP 1 Score: 1067.8 bits (2760), Expect = 5.8e-309
Identity = 520/704 (73.86%), Postives = 602/704 (85.51%), Query Frame = 1

Query: 1   MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYN-SSRLFKLNPIPRHSKPFLQITNVSLQ 60
           MA+ LC SPS+   DHH L NSL+  RK+ L + +S  FK N +  HS+ FLQIT+VSL+
Sbjct: 1   MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLHSRTFLQITHVSLE 60

Query: 61  EYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRI 120
           +  PQET     S+   S+ PD K+    KS +WVNPRSPRASKLR+ SY+ARY SL +I
Sbjct: 61  DPIPQETQKADASNPPNSQDPDRKT----KSYIWVNPRSPRASKLRQHSYDARYASLVKI 120

Query: 121 SESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQT 180
           +ESLDSC   EEDV+ VL+ +G  ILEQDAV+VLNNM+N +TAL+A  +F+  LK S++ 
Sbjct: 121 AESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSREV 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
           I YNVTLKVFRKCR+++ AEKLF+EMLERGVKPDN+TFSTIISCAR+ SLPNKAVEWFEK
Sbjct: 181 ILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEK 240

Query: 241 MPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
           MP F C+PDDVTYSAMIDAYGRAGNVDMA  LYDRARTE WRIDP TFST+I+I+G++GN
Sbjct: 241 MPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGN 300

Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
           +DGCLNVYEEMKA+G+KPNLVIYN+LLDAMGRAKRPWQ K IYKEM  NG   SW TYA+
Sbjct: 301 FDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAA 360

Query: 361 LLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSG 420
           LLRAYGRARY EDAL+VYKEMKEKGL+L+V+LYNTLLAMCADVGY  EA  +F+DMKSSG
Sbjct: 361 LLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSG 420

Query: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDV 480
            C PDSWTFSS+ITIYSCSGKVSEAE MLN M+EAGF+PNIFVLTSLIQCYGKA   D+V
Sbjct: 421 NCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEV 480

Query: 481 VRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE 540
           VRTF+RLLEL +TPDDRFCGC+LNV+TQ+PKEEL KLIDC+++ANPKLG VV+LLL EQ 
Sbjct: 481 VRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKLIDCIDKANPKLGNVVKLLLEEQN 540

Query: 541 KEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSR 600
            EG FR EASELF  +SADV KAYCNCLIDLCVNL+LL+KACEL +LGLTL+IY D+QS+
Sbjct: 541 GEGTFRKEASELFDSISADVXKAYCNCLIDLCVNLNLLEKACELFDLGLTLEIYIDIQSK 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMAS 660
           SPTQWSL+LK LSLGAALTALH+W+NDL+K +E GEELP +LGINTGHGKHKYSDKG+AS
Sbjct: 601 SPTQWSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHKYSDKGLAS 660

Query: 661 VFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVA 704
           VFESHLKEL APFHEAPDKV WFLTTKVAA SWLESR++PELVA
Sbjct: 661 VFESHLKELNAPFHEAPDKVXWFLTTKVAATSWLESRSAPELVA 700

BLAST of Cla010975 vs. TrEMBL
Match: M5WLZ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002169mg PE=4 SV=1)

HSP 1 Score: 1048.5 bits (2710), Expect = 3.6e-303
Identity = 517/706 (73.23%), Postives = 602/706 (85.27%), Query Frame = 1

Query: 1   MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSS-RLFKLNPIPRHSKPFLQITNVSLQ 60
           MA+ LC SPS+ F +  + S+SL S R   L +S  R  KL+    H++  LQI +VSLQ
Sbjct: 1   MAYHLCSSPSSLFPNRQTPSHSLPSPRGFRLGSSGLRTLKLSFPSLHARTSLQINHVSLQ 60

Query: 61  EYAPQETHNPTPSDD-EISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTR 120
           E   QET  PT   + E  +  +  SGS SKS +WVNP SPRAS+LR++SY++RY SL +
Sbjct: 61  EPVAQETQTPTNVPEVESPQRQNRNSGSLSKSYIWVNPSSPRASQLRQKSYDSRYASLVK 120

Query: 121 ISESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQ 180
           ++E L+SC+P E DV + LK +G  ILEQDAVVVLNNM+N + AL+AL+YFQ  LK  ++
Sbjct: 121 VAEYLNSCSPSENDVFEALKGLGDRILEQDAVVVLNNMTNPENALLALKYFQQNLKPKRE 180

Query: 181 TIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFE 240
            I YNVTLKV RK +D++ AEKLF+E+L+RGV+PDNVTFST+ISCAR+ SLP+KAVEWFE
Sbjct: 181 VILYNVTLKVCRKGKDLDRAEKLFDELLKRGVQPDNVTFSTMISCARMSSLPDKAVEWFE 240

Query: 241 KMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAG 300
           KMPSF CNPDDVTYSAMIDAYGR+G VDMAFSLYDRART  WRIDP TFST+IKIHG +G
Sbjct: 241 KMPSFGCNPDDVTYSAMIDAYGRSGKVDMAFSLYDRARTSKWRIDPVTFSTLIKIHGQSG 300

Query: 301 NYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYA 360
           N+DGCLNVYEEMKAIG KPNLVIYN+LLDAMGRAKRPWQ K IY+EMI   FSP+W TYA
Sbjct: 301 NFDGCLNVYEEMKAIGAKPNLVIYNTLLDAMGRAKRPWQAKKIYREMINKEFSPNWVTYA 360

Query: 361 SLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSS 420
           +LLRAYGRARYG+DAL VY+EMKEKG++LNVILYNTLLAMCADVGY +EAVE+F+DMKSS
Sbjct: 361 ALLRAYGRARYGDDALNVYREMKEKGMELNVILYNTLLAMCADVGYADEAVEIFKDMKSS 420

Query: 421 GTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDD 480
            T  PDSWTFSSMITIYSCSGKV+EAE MLNEM+EAGF PNIF+LTSLIQCYGKAK  DD
Sbjct: 421 ETWKPDSWTFSSMITIYSCSGKVTEAETMLNEMLEAGFQPNIFILTSLIQCYGKAKRTDD 480

Query: 481 VVRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQ 540
           VVR FN+LLELG+TPD+RFCGCLLNV+TQTPKEEL KL +C+ERA+ KLG+VV LL+ +Q
Sbjct: 481 VVRIFNQLLELGITPDERFCGCLLNVMTQTPKEELCKLANCIERADEKLGYVVRLLVEKQ 540

Query: 541 EKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQS 600
           +   +F+ EASELF+ + +DV+KAYCNCLIDLCVNLDLL++ACELL+LGLTLQIY D+QS
Sbjct: 541 DNSVNFKKEASELFNSIGSDVKKAYCNCLIDLCVNLDLLERACELLDLGLTLQIYIDIQS 600

Query: 601 RSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMA 660
           RS TQWSLYLKGLSLGAALTALHVWINDL++VLESGEELPPLLGINTGHGKHKYSDKG+A
Sbjct: 601 RSQTQWSLYLKGLSLGAALTALHVWINDLSRVLESGEELPPLLGINTGHGKHKYSDKGLA 660

Query: 661 SVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
           SVFESHLKEL APFHEAPDK GWFLTTKVA KSWLESR+S ELVAA
Sbjct: 661 SVFESHLKELNAPFHEAPDKAGWFLTTKVAVKSWLESRSSSELVAA 706

BLAST of Cla010975 vs. NCBI nr
Match: gi|659128601|ref|XP_008464281.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis melo])

HSP 1 Score: 1346.3 bits (3483), Expect = 0.0e+00
Identity = 664/704 (94.32%), Postives = 685/704 (97.30%), Query Frame = 1

Query: 1   MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
           MAFQLCHSP TFFT HHSLSNSLT QRKTTL NSS LFKLNPIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 120
           ++PQETHN  PSDDEISKY D KSGSSSKSSVWVNPRSPRASKLRKQSYEARY SL RIS
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 180
           ESLDSCNPCE DVADVLKVIG+NILEQDAVVVLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
           FYNVTLKVFRKCRDMEGAE+LFEEML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
           LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420

Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 480
           CSPDSWTFSSMITIYSCSGKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 540
           RTFN+L+ELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 600
           EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 660
           PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
           FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

BLAST of Cla010975 vs. NCBI nr
Match: gi|449443502|ref|XP_004139516.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sativus])

HSP 1 Score: 1327.0 bits (3433), Expect = 0.0e+00
Identity = 654/704 (92.90%), Postives = 679/704 (96.45%), Query Frame = 1

Query: 1   MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SP TFFT+HH LSNSLT QRKTTL NSS LFKL+PIPRHSKPFLQITNVSLQE
Sbjct: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60

Query: 61  YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 120
           +APQ+T N  PS DEISKYPD KSGSSS SSVWVNPRSPRASKLRKQSYEARY SL R+S
Sbjct: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120

Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 180
           ESLDS NPCE DVADVLKVIG+NILE+DA++VLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
           FYNVTLKVFRKCRDMEGAEKLFEEM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
           LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420

Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 540
           RTFN+L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 600
           EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 660
           PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
           FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

BLAST of Cla010975 vs. NCBI nr
Match: gi|590627062|ref|XP_007026347.1| (Pentatricopeptide (PPR) repeat-containing protein [Theobroma cacao])

HSP 1 Score: 1082.0 bits (2797), Expect = 0.0e+00
Identity = 523/701 (74.61%), Postives = 622/701 (88.73%), Query Frame = 1

Query: 5   LCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQEYAPQ 64
           LC SPS+ F D H+LS S   +   +   S RL   +     SK  +QI++VSLQ+   Q
Sbjct: 6   LCSSPSSVFHDRHTLSASPKPRPARSTAPSLRLVSCS---FQSKSSIQISHVSLQDPITQ 65

Query: 65  ETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRISESLD 124
             + P  S+   S+ PDGK+GSSSKS VWVNPRSPRAS+LR+ SY++RY+SL +++E+LD
Sbjct: 66  TKNTPKHSN---SQSPDGKTGSSSKSYVWVNPRSPRASRLRQLSYDSRYSSLVKVAETLD 125

Query: 125 SCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLK-SSKQTIFYN 184
           SCNP E DV  VL  +G+++LEQDAVVVLNNMSN  TAL+AL +FQ +LK +S++ I YN
Sbjct: 126 SCNPNEHDVLSVLSRLGNDVLEQDAVVVLNNMSNPHTALLALNHFQRILKKTSREVILYN 185

Query: 185 VTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 244
           VT+KVFRK +D++GAEKLF+EML++GVKPDNVTFST+ISCAR+C+LP+KAVEWFEKMP +
Sbjct: 186 VTMKVFRKSKDLDGAEKLFDEMLQKGVKPDNVTFSTLISCARVCALPDKAVEWFEKMPIY 245

Query: 245 DCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGC 304
            C+PDDVTYSAMIDAYGRAGNVDMAF+LYDRARTE WRIDP TFST+IKI+G++GNYDGC
Sbjct: 246 GCDPDDVTYSAMIDAYGRAGNVDMAFNLYDRARTEKWRIDPVTFSTLIKIYGISGNYDGC 305

Query: 305 LNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRA 364
           LNVYEEMKA+G KPN+VIYN+LLDAMGRAKRPWQ KTIYKEM  NGFSP+WATYA+LLRA
Sbjct: 306 LNVYEEMKALGAKPNVVIYNTLLDAMGRAKRPWQAKTIYKEMTNNGFSPNWATYAALLRA 365

Query: 365 YGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSP 424
           YGRARYGEDAL +YKEMK+KGL+L VILYNTLLAMCADVGY +EAVE+F+DMK+SGTC P
Sbjct: 366 YGRARYGEDALNIYKEMKDKGLELTVILYNTLLAMCADVGYADEAVEIFEDMKNSGTCKP 425

Query: 425 DSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTF 484
           DSWT+SS+ITIYSCSGKVSEAE +++EM+EAGF+PNIFVLTSLIQCYGKA+H DDVVRTF
Sbjct: 426 DSWTYSSLITIYSCSGKVSEAEGIVDEMLEAGFEPNIFVLTSLIQCYGKAQHTDDVVRTF 485

Query: 485 NRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEKEGD 544
           NR+LELG+TPDDRFCGCLLNV+TQTP+EEL+KL DC+++ANPKLG VV+LL+ EQ+ +G+
Sbjct: 486 NRVLELGITPDDRFCGCLLNVMTQTPREELAKLTDCIKKANPKLGHVVKLLVEEQDGQGN 545

Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRSPTQ 604
           F+ EASELF+ + +DV+KAYCNCLIDLCVNLDLL++ACELLELGL+L+IY D+QSRSPTQ
Sbjct: 546 FKNEASELFNCIGSDVKKAYCNCLIDLCVNLDLLERACELLELGLSLEIYADVQSRSPTQ 605

Query: 605 WSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASVFES 664
           WSL LK LSLGAALT+LHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+A+VFES
Sbjct: 606 WSLNLKSLSLGAALTSLHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLATVFES 665

Query: 665 HLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
           HLKEL APFHEAPDKVGWFLTT+VAAKSWLESR+SP+LVAA
Sbjct: 666 HLKELDAPFHEAPDKVGWFLTTQVAAKSWLESRSSPDLVAA 700

BLAST of Cla010975 vs. NCBI nr
Match: gi|359495626|ref|XP_002269600.2| (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Vitis vinifera])

HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 522/704 (74.15%), Postives = 605/704 (85.94%), Query Frame = 1

Query: 1   MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYN-SSRLFKLNPIPRHSKPFLQITNVSLQ 60
           MA+ LC SPS+   DHH L NSL+  RK+ L + +S  FK N +  HS+ FLQIT+VSL+
Sbjct: 1   MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLHSRTFLQITHVSLE 60

Query: 61  EYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRI 120
           +  PQET     S+   S+ PD K+    KS +WVNPRSPRASKLR+ SY+ARY SL +I
Sbjct: 61  DPIPQETQKADASNPPNSQDPDRKT----KSYIWVNPRSPRASKLRQHSYDARYASLVKI 120

Query: 121 SESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQT 180
           +ESLDSC   EEDV+ VL+ +G  ILEQDAV+VLNNM+N +TAL+A  +F+  LK S++ 
Sbjct: 121 AESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSREV 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
           I YNVTLKVFRKCR+++ AEKLF+EMLERGVKPDN+TFSTIISCAR+ SLPNKAVEWFEK
Sbjct: 181 ILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEK 240

Query: 241 MPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
           MP F C+PDDVTYSAMIDAYGRAGNVDMA  LYDRARTE WRIDP TFST+I+I+G++GN
Sbjct: 241 MPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGN 300

Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
           +DGCLNVYEEMKA+G+KPNLVIYN+LLDAMGRAKRPWQ K IYKEM  NG  PSW TYA+
Sbjct: 301 FDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAA 360

Query: 361 LLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSG 420
           LLRAYGRARY EDAL+VYKEMKEKGL+L+V+LYNTLLAMCADVGY  EA  +F+DMKSSG
Sbjct: 361 LLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSG 420

Query: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDV 480
            C PDSWTFSS+ITIYSCSGKVSEAE MLN M+EAGF+PNIFVLTSLIQCYGKA   D+V
Sbjct: 421 NCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEV 480

Query: 481 VRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE 540
           VRTF+RLLEL +TPDDRFCGC+LNV+TQ+PKEEL KLIDC+++ANPKLG VV+LLL EQ 
Sbjct: 481 VRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKLIDCIDKANPKLGNVVKLLLEEQN 540

Query: 541 KEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSR 600
            EG FR EASELF  +SADV+KAYCNCLIDLCVNL+LL+KACEL +LGLTL+IY D+QS+
Sbjct: 541 GEGTFRKEASELFDSISADVKKAYCNCLIDLCVNLNLLEKACELFDLGLTLEIYIDIQSK 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMAS 660
           SPTQWSL+LK LSLGAALTALH+W+NDL+K +E GEELP +LGINTGHGKHKYSDKG+AS
Sbjct: 601 SPTQWSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHKYSDKGLAS 660

Query: 661 VFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVA 704
           VFESHLKEL APFHEAPDKVGWFLTTKVAA SWLESR++PELVA
Sbjct: 661 VFESHLKELNAPFHEAPDKVGWFLTTKVAATSWLESRSAPELVA 700

BLAST of Cla010975 vs. NCBI nr
Match: gi|147841962|emb|CAN63129.1| (hypothetical protein VITISV_001456 [Vitis vinifera])

HSP 1 Score: 1067.8 bits (2760), Expect = 8.3e-309
Identity = 520/704 (73.86%), Postives = 602/704 (85.51%), Query Frame = 1

Query: 1   MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYN-SSRLFKLNPIPRHSKPFLQITNVSLQ 60
           MA+ LC SPS+   DHH L NSL+  RK+ L + +S  FK N +  HS+ FLQIT+VSL+
Sbjct: 1   MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLHSRTFLQITHVSLE 60

Query: 61  EYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRI 120
           +  PQET     S+   S+ PD K+    KS +WVNPRSPRASKLR+ SY+ARY SL +I
Sbjct: 61  DPIPQETQKADASNPPNSQDPDRKT----KSYIWVNPRSPRASKLRQHSYDARYASLVKI 120

Query: 121 SESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQT 180
           +ESLDSC   EEDV+ VL+ +G  ILEQDAV+VLNNM+N +TAL+A  +F+  LK S++ 
Sbjct: 121 AESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSREV 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
           I YNVTLKVFRKCR+++ AEKLF+EMLERGVKPDN+TFSTIISCAR+ SLPNKAVEWFEK
Sbjct: 181 ILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEK 240

Query: 241 MPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
           MP F C+PDDVTYSAMIDAYGRAGNVDMA  LYDRARTE WRIDP TFST+I+I+G++GN
Sbjct: 241 MPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGN 300

Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
           +DGCLNVYEEMKA+G+KPNLVIYN+LLDAMGRAKRPWQ K IYKEM  NG   SW TYA+
Sbjct: 301 FDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAA 360

Query: 361 LLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSG 420
           LLRAYGRARY EDAL+VYKEMKEKGL+L+V+LYNTLLAMCADVGY  EA  +F+DMKSSG
Sbjct: 361 LLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSG 420

Query: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDV 480
            C PDSWTFSS+ITIYSCSGKVSEAE MLN M+EAGF+PNIFVLTSLIQCYGKA   D+V
Sbjct: 421 NCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEV 480

Query: 481 VRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE 540
           VRTF+RLLEL +TPDDRFCGC+LNV+TQ+PKEEL KLIDC+++ANPKLG VV+LLL EQ 
Sbjct: 481 VRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKLIDCIDKANPKLGNVVKLLLEEQN 540

Query: 541 KEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSR 600
            EG FR EASELF  +SADV KAYCNCLIDLCVNL+LL+KACEL +LGLTL+IY D+QS+
Sbjct: 541 GEGTFRKEASELFDSISADVXKAYCNCLIDLCVNLNLLEKACELFDLGLTLEIYIDIQSK 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMAS 660
           SPTQWSL+LK LSLGAALTALH+W+NDL+K +E GEELP +LGINTGHGKHKYSDKG+AS
Sbjct: 601 SPTQWSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHKYSDKGLAS 660

Query: 661 VFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVA 704
           VFESHLKEL APFHEAPDKV WFLTTKVAA SWLESR++PELVA
Sbjct: 661 VFESHLKELNAPFHEAPDKVXWFLTTKVAATSWLESRSAPELVA 700

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP314_ARATH2.5e-27365.95Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop... [more]
PP420_ARATH1.9e-13237.91Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop... [more]
PP178_ARATH4.4e-4425.00Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
PP362_ARATH2.1e-3827.59Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN... [more]
PPR49_ARATH9.0e-3723.63Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LVP1_CUCSA0.0e+0092.90Uncharacterized protein OS=Cucumis sativus GN=Csa_1G173140 PE=4 SV=1[more]
A0A061GPA6_THECC0.0e+0074.61Pentatricopeptide (PPR) repeat-containing protein OS=Theobroma cacao GN=TCM_0304... [more]
F6HCW3_VITVI0.0e+0074.15Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0194g00270 PE=4 SV=... [more]
A5B4A6_VITVI5.8e-30973.86Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001456 PE=4 SV=1[more]
M5WLZ8_PRUPE3.6e-30373.23Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002169mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659128601|ref|XP_008464281.1|0.0e+0094.32PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ... [more]
gi|449443502|ref|XP_004139516.1|0.0e+0092.90PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ... [more]
gi|590627062|ref|XP_007026347.1|0.0e+0074.61Pentatricopeptide (PPR) repeat-containing protein [Theobroma cacao][more]
gi|359495626|ref|XP_002269600.2|0.0e+0074.15PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ... [more]
gi|147841962|emb|CAN63129.1|8.3e-30973.86hypothetical protein VITISV_001456 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002625Smr_dom
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0031425 chloroplast RNA processing
biological_process GO:0045727 positive regulation of translation
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008568 microtubule-severing ATPase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU53482watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla010975Cla010975.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU53482WMU53482transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002625Smr domainSMARTSM00463SMR_2coord: 603..693
score: 8.2
IPR002625Smr domainPROFILEPS50828SMRcoord: 606..690
score: 16
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 317..364
score: 5.6E-9coord: 247..292
score: 1.4E-9coord: 179..223
score: 2.0
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 182..213
score: 6.0E-6coord: 215..248
score: 0.0013coord: 320..354
score: 2.1E-5coord: 250..283
score: 1.6E-7coord: 356..388
score: 1.6E-7coord: 427..459
score: 3.0E-7coord: 463..494
score: 3.0E-5coord: 391..424
score: 3.4E-6coord: 286..318
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 459..493
score: 10.128coord: 178..212
score: 11.06coord: 318..352
score: 10.972coord: 353..387
score: 10.589coord: 248..282
score: 10.95coord: 213..247
score: 8.627coord: 283..317
score: 10.961coord: 388..422
score: 10.742coord: 424..458
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 254..489
score: 9.6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 35..107
score: 5.0E-202coord: 123..499
score: 5.0E-202coord: 566..585
score: 5.0E
NoneNo IPR availablePANTHERPTHR24015:SF437SUBFAMILY NOT NAMEDcoord: 35..107
score: 5.0E-202coord: 123..499
score: 5.0E-202coord: 566..585
score: 5.0E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 293..492
score: 6.5