CsGy1G015090 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G015090
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Pentatricopeptide repeat-containing protein At4g16390, chloroplastic
Location	Chr1 : 11012312 .. 11014426 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCCAGCTCTGCTATTCGCCGCCCACCTTCTTTACCGAACACCATTTCCTTTCCAATTCTCTCACTCCTCAACGTAAAACAACTCTGTCCAACTCCTCTCCTCTTTTCAAGCTCAGTCCCATTCCTCGTCACTCAAAACCGTTCCTCCAAATTACCAATGTCTCGCTACAGGAACACGCTCCTCAAGATACCCAAAATACAATTCCCTCTGCTGATGAAATCTCCAAATACCCAGATTCGAAATCCGGTTCCTCCTCGAACAGCTCCGTTTGGGTCAATCCTAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGATATGCTTCTCTTATTAGAGTATCGGAGTCTTTAGACTCTTCTAATCCATGTGAGGTAGATGTTGCTGATGTCTTGAAGGTGATAGGTAATAACATTTTAGAACGGGACGCTATTTTAGTGCTGAATAACATGTCAAATTCCCAAACTGCGTTGCTTGCTCTTCGCTACTTCCAGGATATGCTGAAATCAAGTAAACAGACAATTTTTTATAACGTGACACTGAAGGTGTTTAGGAAGTGCAGAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGATTAACAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCTTTACCAAGTAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCTACGATGATTGATGCCTATGGACGTGCTGGTAATGTTGACATGGCTTTCAGTTTGTATGACCGTGCAAGAACGGAAAACTGGCGAATTGATCCTGCGACATTCTCGACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTTTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACTGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAAACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCATTGTTTACAAGGAGATGAAGGAAAAGGGACTGCAGTTAAACGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCTGATGTTGGCTATGTTAATGAGGCTGTTGAAATTTTTCAAGATATGAAGAGTTCTGGCACTTGCTCACCTGACAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGCGGTGGAAAAGTATCAGAGGCTGAAGAAATGTTGAACGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACATCACTAATCCAGTGCTATGGGAAAGCTAAACGTGTTGATGATGTAGTGAGGACATTCAATCAATTGATAGAGTTAGGATTAACTCCAGACGATCGATTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACACCAAAAGGGGAACTTGGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTCGGGTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCTTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAAGGACTTAACAAAGGTACTTGAATCTGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTCGGATGGTTTTTGACAACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAAGTTCCCCTGAATTGGTTGCAGCATAG

mRNA sequence

ATGGCGTTCCAGCTCTGCTATTCGCCGCCCACCTTCTTTACCGAACACCATTTCCTTTCCAATTCTCTCACTCCTCAACGTAAAACAACTCTGTCCAACTCCTCTCCTCTTTTCAAGCTCAGTCCCATTCCTCGTCACTCAAAACCGTTCCTCCAAATTACCAATGTCTCGCTACAGGAACACGCTCCTCAAGATACCCAAAATACAATTCCCTCTGCTGATGAAATCTCCAAATACCCAGATTCGAAATCCGGTTCCTCCTCGAACAGCTCCGTTTGGGTCAATCCTAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGATATGCTTCTCTTATTAGAGTATCGGAGTCTTTAGACTCTTCTAATCCATGTGAGGTAGATGTTGCTGATGTCTTGAAGGTGATAGGTAATAACATTTTAGAACGGGACGCTATTTTAGTGCTGAATAACATGTCAAATTCCCAAACTGCGTTGCTTGCTCTTCGCTACTTCCAGGATATGCTGAAATCAAGTAAACAGACAATTTTTTATAACGTGACACTGAAGGTGTTTAGGAAGTGCAGAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGATTAACAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCTTTACCAAGTAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCTACGATGATTGATGCCTATGGACGTGCTGGTAATGTTGACATGGCTTTCAGTTTGTATGACCGTGCAAGAACGGAAAACTGGCGAATTGATCCTGCGACATTCTCGACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTTTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACTGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAAACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCATTGTTTACAAGGAGATGAAGGAAAAGGGACTGCAGTTAAACGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCTGATGTTGGCTATGTTAATGAGGCTGTTGAAATTTTTCAAGATATGAAGAGTTCTGGCACTTGCTCACCTGACAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGCGGTGGAAAAGTATCAGAGGCTGAAGAAATGTTGAACGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACATCACTAATCCAGTGCTATGGGAAAGCTAAACGTGTTGATGATGTAGTGAGGACATTCAATCAATTGATAGAGTTAGGATTAACTCCAGACGATCGATTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACACCAAAAGGGGAACTTGGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTCGGGTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCTTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAAGGACTTAACAAAGGTACTTGAATCTGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTCGGATGGTTTTTGACAACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAAGTTCCCCTGAATTGGTTGCAGCATAG

Coding sequence (CDS)

ATGGCGTTCCAGCTCTGCTATTCGCCGCCCACCTTCTTTACCGAACACCATTTCCTTTCCAATTCTCTCACTCCTCAACGTAAAACAACTCTGTCCAACTCCTCTCCTCTTTTCAAGCTCAGTCCCATTCCTCGTCACTCAAAACCGTTCCTCCAAATTACCAATGTCTCGCTACAGGAACACGCTCCTCAAGATACCCAAAATACAATTCCCTCTGCTGATGAAATCTCCAAATACCCAGATTCGAAATCCGGTTCCTCCTCGAACAGCTCCGTTTGGGTCAATCCTAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGATATGCTTCTCTTATTAGAGTATCGGAGTCTTTAGACTCTTCTAATCCATGTGAGGTAGATGTTGCTGATGTCTTGAAGGTGATAGGTAATAACATTTTAGAACGGGACGCTATTTTAGTGCTGAATAACATGTCAAATTCCCAAACTGCGTTGCTTGCTCTTCGCTACTTCCAGGATATGCTGAAATCAAGTAAACAGACAATTTTTTATAACGTGACACTGAAGGTGTTTAGGAAGTGCAGAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGATTAACAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCTTTACCAAGTAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCTACGATGATTGATGCCTATGGACGTGCTGGTAATGTTGACATGGCTTTCAGTTTGTATGACCGTGCAAGAACGGAAAACTGGCGAATTGATCCTGCGACATTCTCGACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTTTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACTGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAAACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCATTGTTTACAAGGAGATGAAGGAAAAGGGACTGCAGTTAAACGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCTGATGTTGGCTATGTTAATGAGGCTGTTGAAATTTTTCAAGATATGAAGAGTTCTGGCACTTGCTCACCTGACAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGCGGTGGAAAAGTATCAGAGGCTGAAGAAATGTTGAACGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACATCACTAATCCAGTGCTATGGGAAAGCTAAACGTGTTGATGATGTAGTGAGGACATTCAATCAATTGATAGAGTTAGGATTAACTCCAGACGATCGATTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACACCAAAAGGGGAACTTGGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTCGGGTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCTTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAAGGACTTAACAAAGGTACTTGAATCTGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTCGGATGGTTTTTGACAACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAAGTTCCCCTGAATTGGTTGCAGCATAG

Protein sequence

MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQEHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVSESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA

Homology

[Close]

BLAST of CsGy1G015090 vs. NCBI nr
Match: XP_004139516.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sativus] >KGN64994.1 hypothetical protein Csa_1G173140 [Cucumis sativus])

HSP 1 Score: 823.5 bits (2126), Expect = 5.3e-235
Identity = 704/704 (100.00%), Postives = 704/704 (100.00%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE
Sbjct: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS
Sbjct: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXXX 240
           FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXX 480
           CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           XXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 XXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CsGy1G015090 vs. NCBI nr
Match: XP_008464281.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis melo])

HSP 1 Score: 775.4 bits (2001), Expect = 1.7e-220
Identity = 674/704 (95.74%), Postives = 689/704 (97.87%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SPPTFFT HH LSNSLTPQRKTTLSNSSPLFKL+PIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           H+PQ+T NTIPS DEISKY D+KSGSSS SSVWVNPRSPRASKLRKQSYEARYASL+R+S
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDS NPCEVDVADVLKVIGNNILE+DA++VLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXXX 240
           FYNVTLKVFRKCRDMEGAE+LFEEM+NRGVKPDNVT XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXX 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLNDMVEAGF XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           XXXXXXXXXXXXXXDRFCGCLLNVITQTPK E+ KLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 XXXXXXXXXXXXXXDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CsGy1G015090 vs. NCBI nr
Match: XP_023520706.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 676.4 bits (1744), Expect = 1.0e-190
Identity = 587/705 (83.26%), Postives = 615/705 (87.23%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTL-SNSSPLFKLSPIPRHSKPFLQITNVSLQ 60
           MAFQL + P TFFT+H    NSLT   KTTL  +SS +FKL+PIP HSKPFLQITNVS Q
Sbjct: 1   MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSPQ 60

Query: 61  EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRV 120
           E+APQ+T+N+ PS DEISK+PD KSGSSS +SVWVNP SPRASKLRKQSYEARYASL ++
Sbjct: 61  EYAPQETRNSSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120

Query: 121 SESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQT 180
           SESLDS NPCE DVADVLK I + ILE+DAI VLNNMSNSQTALL LRYFQD+LKSSKQ 
Sbjct: 121 SESLDSCNPCEDDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQA 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXX 240
           +FYNVTLKVFRKCRD EGAEKLF+EM+ RGVKPDNVTF         XXXXXXXXXXXXX
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARFXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXX 480
            CSPDSWTFSSMITIYSC G VSEAEEMLN+M+EAGF                       
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480

Query: 481 XXXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD 540
                          DRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVV+LLLGE+D
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
            EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
           SPTQWSLYLKGLSLGAALTALHVWI DLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
           VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701

[Close]

BLAST of CsGy1G015090 vs. NCBI nr
Match: XP_022927501.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita moschata])

HSP 1 Score: 675.2 bits (1741), Expect = 2.3e-190
Identity = 592/705 (83.97%), Postives = 618/705 (87.66%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNS-SPLFKLSPIPRHSKPFLQITNVSLQ 60
           MAFQL + P TFFT+H    NSLT   KTTL  S S +FKL+PIP HSKPFLQITNVS Q
Sbjct: 1   MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQ 60

Query: 61  EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRV 120
           E+APQ+T+N  PS DEISK+PD KSGSSS +SVWVNP SPRASKLRKQSYEARYASL ++
Sbjct: 61  EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120

Query: 121 SESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQT 180
           SESLDS NPCEVDVADVLK I + ILE+DAI VLNNMSNSQTALL  RYFQD+LKSSKQ 
Sbjct: 121 SESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQA 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXX 240
           +FYNVTLKVFRKCRD EGAEKLF+EM+ RGVKPDNVTF    XXXXXXXXXXXXXXXXXX
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIIXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXX 480
            CSPDSWTFSSMITIYSC G VSEAEEMLN+M+EAGF                       
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480

Query: 481 XXXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD 540
                          DRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVV+LLLGE+D
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
            EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
           SPTQWSLYLKGLSLGAALTALHVWI DLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
           VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701

[Close]

BLAST of CsGy1G015090 vs. NCBI nr
Match: XP_022973114.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita maxima])

HSP 1 Score: 669.8 bits (1727), Expect = 9.8e-189
Identity = 591/705 (83.83%), Postives = 619/705 (87.80%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTL-SNSSPLFKLSPIPRHSKPFLQITNVSLQ 60
           MAFQL + P TFFT+H    NSLT   KTTL  +SS +FKL+PIP HSKPFLQITNVS Q
Sbjct: 1   MAFQLSHFPYTFFTDH----NSLTFHSKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSQQ 60

Query: 61  EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRV 120
           E+APQ+T+N  PS DEISK+PD KSGSSS +SVWVNP SPRASKLRKQSYEARYASL ++
Sbjct: 61  EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120

Query: 121 SESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQT 180
           SESLDS NPCE DVADVLK I   ILE+DAI VLNNMSNSQTALL LRYFQD+LKSSKQ 
Sbjct: 121 SESLDSCNPCEDDVADVLKRIDRKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQA 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXX 240
           +FYNVTLKVFRKC+D EGAEKLF+EM+ RGVKPDNVTF  XXXXXXXXXXXXXXXXXXXX
Sbjct: 181 VFYNVTLKVFRKCKDFEGAEKLFDEMLKRGVKPDNVTFSTXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXX 480
            CSPDSWTFSSMITIYSC G VSEAEEMLN+M+EAGF                       
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480

Query: 481 XXXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD 540
                          DRFCGCLLNVITQTPK EL KLIDCV RANPKLGF+V LL+GE+D
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFMVRLLVGEKD 540

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
            EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
           S TQWSLYLKGLSLGAALTALHVWI DLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 STTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
           VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 701

[Close]

BLAST of CsGy1G015090 vs. TAIR10
Match: AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 435.3 bits (1118), Expect = 7.4e-122
Identity = 460/702 (65.53%), Postives = 533/702 (75.93%), Query Frame = 0


Query: 5   LCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQEHAPQ 64
           LC SP +   +   L N L+   K+T  +    +  +    HS+  LQ T+VS+QE  PQ
Sbjct: 6   LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65

Query: 65  DTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVSESLD 124
             ++ +   D     P     ++S S VWVNP+SPRAS+LR++SY++RY+SLI+++ESLD
Sbjct: 66  SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125

Query: 125 SSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTIFYNV 184
           +  P E DV DV+   G  + E+DA++ LNNM+N +TA L L    + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185

Query: 185 TLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
           T+KVFRK +D+E +EKLF+EM+ RG+KPDN TF             XXXXXXXXXXXXXX
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPXXXXXXXXXXXXXX 245

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 246 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 305

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 365

Query: 365 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSPD 424
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   C PD
Sbjct: 366 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCETCDPD 425

Query: 425 SWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXX 484
           SWTFSS+IT+Y+C G+VSEAE  L  M EAGF                            
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485

Query: 485 XXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD-KEGN 544
                     DRFCGCLLNV+TQTP  E+GKLI CV +A PKLG VV++L+ EQ+ +EG 
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545

Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQ 604
           F+ EASEL   + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL   IY  LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605

Query: 605 WSLYLKGLSLGAALTALHVWIKDLTK-VLESGEELPPLLGINTGHGKHKYSDKGLASVFE 664
           WSL+LK LSLGAALTALHVW+ DL++  LESGEE PPLLGINTGHGKHKYSDKGLA+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665

Query: 665 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
           SHLKELNAPFHEAP+KVGWFLTT VAAK+WLESR S   V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702

[Close]

BLAST of CsGy1G015090 vs. TAIR10
Match: AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 143.7 bits (361), Expect = 4.4e-34
Identity = 114/280 (40.71%), Postives = 169/280 (60.36%), Query Frame = 0


Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXX 480
           C PD++++++M+ IY  GGK  +A E+  +M++AG          XXXXXXXXXXXXXXX
Sbjct: 428 CRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCXXXXXXXXXXXXXXX 487

Query: 481 XXXXXXXXXXXXXXDRFCGCLLNVITQTPKGE-LGKLIDCVVRANPKLGFVVELLLGEQD 540
           XXXXXXXXXXXXXX                 E   K++ C+ RAN KL   V L++ E+ 
Sbjct: 488 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEDAEKVMACLERANKKLVTFVNLIVDEKT 547

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
           +    + E   + +    + R+ +CNCLID+C   +  ++A ELL LG    +Y  L ++
Sbjct: 548 EYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNK 607

Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
           +  +WSL ++ LS+GAA TAL  W++ L  +++  EELP L    TG G H++S +GLA+
Sbjct: 608 TIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRFS-QGLAN 667

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSP 700
            F  HL++L+APF ++ ++ G F+ TK    SWLES+  P
Sbjct: 668 SFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705

[Close]

BLAST of CsGy1G015090 vs. TAIR10
Match: AT2G31400.1 (genomes uncoupled 1)

HSP 1 Score: 67.4 bits (163), Expect = 4.0e-11
Identity = 54/185 (29.19%), Postives = 91/185 (49.19%), Query Frame = 0


Query: 524 NPKLGFVVELLLGEQDKEGNFRTEASELFSVVS---ADVRKAYCNCLIDLCVNLDLLDKA 583
           N   G V  LL+G+++   N   +A  LF  V+        A+ N L D+  +     + 
Sbjct: 706 NKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFG-QKRG 765

Query: 584 CELLDL-GLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPP 643
            EL+ L G + Q+++++ S S     L L  +S GAA   +H W+ ++  ++  G ELP 
Sbjct: 766 AELVALEGRSRQVWENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPK 825

Query: 644 LLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRS 703
           +L I TG GKH     D  L    E  L+ ++APFH +   +G F ++     +WL   +
Sbjct: 826 VLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESA 882

[Close]

BLAST of CsGy1G015090 vs. Swiss-Prot
Match: sp|Q8GWE0|PP314_ARATH (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)

HSP 1 Score: 435.3 bits (1118), Expect = 1.3e-120
Identity = 460/702 (65.53%), Postives = 533/702 (75.93%), Query Frame = 0


Query: 5   LCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQEHAPQ 64
           LC SP +   +   L N L+   K+T  +    +  +    HS+  LQ T+VS+QE  PQ
Sbjct: 6   LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65

Query: 65  DTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVSESLD 124
             ++ +   D     P     ++S S VWVNP+SPRAS+LR++SY++RY+SLI+++ESLD
Sbjct: 66  SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125

Query: 125 SSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTIFYNV 184
           +  P E DV DV+   G  + E+DA++ LNNM+N +TA L L    + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185

Query: 185 TLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
           T+KVFRK +D+E +EKLF+EM+ RG+KPDN TF             XXXXXXXXXXXXXX
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPXXXXXXXXXXXXXX 245

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 246 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 305

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 365

Query: 365 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSPD 424
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   C PD
Sbjct: 366 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCETCDPD 425

Query: 425 SWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXX 484
           SWTFSS+IT+Y+C G+VSEAE  L  M EAGF                            
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485

Query: 485 XXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD-KEGN 544
                     DRFCGCLLNV+TQTP  E+GKLI CV +A PKLG VV++L+ EQ+ +EG 
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545

Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQ 604
           F+ EASEL   + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL   IY  LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605

Query: 605 WSLYLKGLSLGAALTALHVWIKDLTK-VLESGEELPPLLGINTGHGKHKYSDKGLASVFE 664
           WSL+LK LSLGAALTALHVW+ DL++  LESGEE PPLLGINTGHGKHKYSDKGLA+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665

Query: 665 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
           SHLKELNAPFHEAP+KVGWFLTT VAAK+WLESR S   V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702

[Close]

BLAST of CsGy1G015090 vs. Swiss-Prot
Match: sp|Q10PZ4|ATP4_ORYSJ (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.6e-78
Identity = 149/281 (53.02%), Postives = 185/281 (65.84%), Query Frame = 0


Query: 423 PDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXXXX 482
           PDSW++SSM+T+YSC G V+ AE +LN+MVEAGF                          
Sbjct: 395 PDSWSYSSMVTLYSCTGNVAGAEGILNEMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRS 454

Query: 483 XXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDKEG 542
                       DRFCGCLL V   TP  ELGK+I C+ R++ +LG VV LL+       
Sbjct: 455 FAMLEDLGITPDDRFCGCLLTVAAGTPADELGKVIGCIDRSSAQLGAVVRLLVDAAAPSE 514

Query: 543 NFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPT 602
             R  A EL       VR  YCNCL+DL VNL  ++KAC LLD+ L L IY ++Q+R+ T
Sbjct: 515 PLREAAGELLGGARGVVRMPYCNCLMDLAVNLSQMEKACALLDVALRLGIYSNVQTRTQT 574

Query: 603 QWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASVFE 662
           QWSL+L+GLS+GAALT LHVW+ DL   L++G+ELPPLLGI+TG GK+ YS KGLA+VFE
Sbjct: 575 QWSLHLRGLSVGAALTTLHVWMSDLYAALQAGDELPPLLGIHTGQGKNTYSYKGLATVFE 634

Query: 663 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVA 704
           SHLKEL+APFHEAP+K GWFLTT VAA+ WLE++ S ELVA
Sbjct: 635 SHLKELDAPFHEAPDKAGWFLTTSVAARHWLETKKSAELVA 675

[Close]

BLAST of CsGy1G015090 vs. Swiss-Prot
Match: sp|B4F8Z1|ATP4_MAIZE (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.5e-76
Identity = 147/281 (52.31%), Postives = 187/281 (66.55%), Query Frame = 0


Query: 423 PDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXXXX 482
           PDSW++SSM+T+YS    V  AE +LN+MVEAGF                          
Sbjct: 410 PDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVRS 469

Query: 483 XXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDKEG 542
                       DRFCGCLL+V   TP  ELGK+I C+ R+N +LG VV+LL+     E 
Sbjct: 470 FGMLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLLVDRSSSE- 529

Query: 543 NFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPT 602
           +FR  A EL       V+  YCNCL+DLCVNL+ ++KAC LLD    L IY ++Q+R+ T
Sbjct: 530 SFREAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYANIQTRTQT 589

Query: 603 QWSLYLKGLSLGAALTALHVWIKDLTKVLESGEE-LPPLLGINTGHGKHKYSDKGLASVF 662
           QWSL+L+GLS+GAALT LHVW+ DL   L++G E LPPLLGI+TG GK+ YSD+GLA++F
Sbjct: 590 QWSLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYSDRGLAAMF 649

Query: 663 ESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELV 703
           E+HLKEL+APFHEAP+K GWFLTT VAAK WLES+++ ELV
Sbjct: 650 EAHLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELV 689

[Close]

BLAST of CsGy1G015090 vs. Swiss-Prot
Match: sp|Q9LS25|PP420_ARATH (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 8.0e-33
Identity = 114/280 (40.71%), Postives = 169/280 (60.36%), Query Frame = 0


Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXX 480
           C PD++++++M+ IY  GGK  +A E+  +M++AG          XXXXXXXXXXXXXXX
Sbjct: 428 CRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCXXXXXXXXXXXXXXX 487

Query: 481 XXXXXXXXXXXXXXDRFCGCLLNVITQTPKGE-LGKLIDCVVRANPKLGFVVELLLGEQD 540
           XXXXXXXXXXXXXX                 E   K++ C+ RAN KL   V L++ E+ 
Sbjct: 488 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEDAEKVMACLERANKKLVTFVNLIVDEKT 547

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
           +    + E   + +    + R+ +CNCLID+C   +  ++A ELL LG    +Y  L ++
Sbjct: 548 EYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNK 607

Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
           +  +WSL ++ LS+GAA TAL  W++ L  +++  EELP L    TG G H++S +GLA+
Sbjct: 608 TIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRFS-QGLAN 667

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSP 700
            F  HL++L+APF ++ ++ G F+ TK    SWLES+  P
Sbjct: 668 SFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705

[Close]

BLAST of CsGy1G015090 vs. Swiss-Prot
Match: sp|Q9SIC9|PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.3e-10
Identity = 54/185 (29.19%), Postives = 91/185 (49.19%), Query Frame = 0


Query: 524 NPKLGFVVELLLGEQDKEGNFRTEASELFSVVS---ADVRKAYCNCLIDLCVNLDLLDKA 583
           N   G V  LL+G+++   N   +A  LF  V+        A+ N L D+  +     + 
Sbjct: 706 NKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFG-QKRG 765

Query: 584 CELLDL-GLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPP 643
            EL+ L G + Q+++++ S S     L L  +S GAA   +H W+ ++  ++  G ELP 
Sbjct: 766 AELVALEGRSRQVWENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPK 825

Query: 644 LLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRS 703
           +L I TG GKH     D  L    E  L+ ++APFH +   +G F ++     +WL   +
Sbjct: 826 VLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESA 882

[Close]

BLAST of CsGy1G015090 vs. TrEMBL
Match: tr|A0A0A0LVP1|A0A0A0LVP1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=4 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 3.5e-235
Identity = 704/704 (100.00%), Postives = 704/704 (100.00%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE
Sbjct: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS
Sbjct: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXXX 240
           FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXX 480
           CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           XXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 XXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CsGy1G015090 vs. TrEMBL
Match: tr|A0A1S3CL39|A0A1S3CL39_CUCME (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502208 PE=4 SV=1)

HSP 1 Score: 775.4 bits (2001), Expect = 1.1e-220
Identity = 674/704 (95.74%), Postives = 689/704 (97.87%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SPPTFFT HH LSNSLTPQRKTTLSNSSPLFKL+PIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           H+PQ+T NTIPS DEISKY D+KSGSSS SSVWVNPRSPRASKLRKQSYEARYASL+R+S
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDS NPCEVDVADVLKVIGNNILE+DA++VLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXXX 240
           FYNVTLKVFRKCRDMEGAE+LFEEM+NRGVKPDNVT XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXXX 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLNDMVEAGF XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           XXXXXXXXXXXXXXDRFCGCLLNVITQTPK E+ KLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 XXXXXXXXXXXXXXDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CsGy1G015090 vs. TrEMBL
Match: tr|A0A2I4DEQ4|A0A2I4DEQ4_9ROSI (pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108979404 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.5e-153
Identity = 523/704 (74.29%), Postives = 585/704 (83.10%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNV-SLQ 60
           MA+ LC SP + F +     +SL+  RK  L + +  FK SP+    K   QI +V S+Q
Sbjct: 1   MAYHLCSSPSSLFNDRQPFGSSLSSSRKPILRSLTFFFKPSPLQPQPKTLFQIRHVSSIQ 60

Query: 61  EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRV 120
           +  PQ+TQ   PS D  +KYPD KSGSSS S VWVNP+SP+AS+LR+ SY+ARYASL +V
Sbjct: 61  DPIPQETQKASPSEDSNTKYPDGKSGSSSRSYVWVNPKSPKASRLRQHSYDARYASLAKV 120

Query: 121 SESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQT 180
           +ESL+S NP E DVA+VL  +G+ ILE+DA++VLNN  N  TALLALRYFQ  LK +++ 
Sbjct: 121 AESLNSCNPNEEDVAEVLAALGDRILEQDAVIVLNNAMNPDTALLALRYFQQRLKPNREV 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXX 240
           + YNVT+KVFRKCRD+ GAEKLF+EM+ RG+KPDNVTFXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 VLYNVTIKVFRKCRDLVGAEKLFDEMLERGLKPDNVTFXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXX 480
            C PDSW+FSS+ITI+SC GKVSEAE MLN+M+E GF                       
Sbjct: 421 TCKPDSWSFSSLITIHSCSGKVSEAEAMLNEMLEGGFEPNIFVLTSLIQCYGKAQRTDDV 480

Query: 481 XXXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD 540
                          +RFCGCLLNV+TQTPK EL KL DCV +AN KLG VV+LLL EQD
Sbjct: 481 VRTFHQLLELGITPDERFCGCLLNVMTQTPKEELNKLTDCVKKANSKLGHVVKLLLEEQD 540

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
            +G F+ +ASELF  VS DVRKAYCNCLIDL VNL+LL++ACELL+LGLTL+IY D+QSR
Sbjct: 541 SDGEFKKQASELFDSVSLDVRKAYCNCLIDLSVNLNLLERACELLELGLTLEIYTDIQSR 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
           SPTQWSL+LKGLSLGAALTALHVWI DL+K ++ GEELPPLLGINTGHGKHKYSDKGLA+
Sbjct: 601 SPTQWSLHLKGLSLGAALTALHVWINDLSKAVKCGEELPPLLGINTGHGKHKYSDKGLAT 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVA 704
           VFE+HLKELNAPFHEAP+KVGWFLTTKVAA+SWLESRSSPELVA
Sbjct: 661 VFETHLKELNAPFHEAPDKVGWFLTTKVAAQSWLESRSSPELVA 704

[Close]

BLAST of CsGy1G015090 vs. TrEMBL
Match: tr|F6HCW3|F6HCW3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0194g00270 PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 3.1e-151
Identity = 509/704 (72.30%), Postives = 575/704 (81.68%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTL-SNSSPLFKLSPIPRHSKPFLQITNVSLQ 60
           MA+ LC SP +   +HH+L NSL+  RK+ L S +S  FK + +  HS+ FLQIT+VSL+
Sbjct: 1   MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLHSRTFLQITHVSLE 60

Query: 61  EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRV 120
           +  PQ+TQ    S    S+ PD K    + S +WVNPRSPRASKLR+ SY+ARYASL+++
Sbjct: 61  DPIPQETQKADASNPPNSQDPDRK----TKSYIWVNPRSPRASKLRQHSYDARYASLVKI 120

Query: 121 SESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQT 180
           +ESLDS    E DV+ VL+ +G+ ILE+DA++VLNNM+N +TALLA  +F+  LK S++ 
Sbjct: 121 AESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSREV 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXX 240
           I YNVTLKVFRKCR+++ AEKLF+EM+ RGVKPDN+TF             XXXXXXXXX
Sbjct: 181 ILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXX 480
            C PDSWTFSS+ITIYSC GKVSEAE MLN M+EAGF                       
Sbjct: 421 NCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEV 480

Query: 481 XXXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD 540
                          DRFCGC+LNV+TQ+PK ELGKLIDC+ +ANPKLG VV+LLL EQ+
Sbjct: 481 VRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKLIDCIDKANPKLGNVVKLLLEEQN 540

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
            EG FR EASELF  +SADV+KAYCNCLIDLCVNL+LL+KACEL DLGLTL+IY D+QS+
Sbjct: 541 GEGTFRKEASELFDSISADVKKAYCNCLIDLCVNLNLLEKACELFDLGLTLEIYIDIQSK 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
           SPTQWSL+LK LSLGAALTALH+W+ DL+K +E GEELP +LGINTGHGKHKYSDKGLAS
Sbjct: 601 SPTQWSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHKYSDKGLAS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVA 704
           VFESHLKELNAPFHEAP+KVGWFLTTKVAA SWLESRS+PELVA
Sbjct: 661 VFESHLKELNAPFHEAPDKVGWFLTTKVAATSWLESRSAPELVA 700

[Close]

BLAST of CsGy1G015090 vs. TrEMBL
Match: tr|A5B4A6|A5B4A6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_001456 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 3.5e-150
Identity = 507/704 (72.02%), Postives = 572/704 (81.25%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTL-SNSSPLFKLSPIPRHSKPFLQITNVSLQ 60
           MA+ LC SP +   +HH+L NSL+  RK+ L S +S  FK + +  HS+ FLQIT+VSL+
Sbjct: 1   MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLHSRTFLQITHVSLE 60

Query: 61  EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRV 120
           +  PQ+TQ    S    S+ PD K    + S +WVNPRSPRASKLR+ SY+ARYASL+++
Sbjct: 61  DPIPQETQKADASNPPNSQDPDRK----TKSYIWVNPRSPRASKLRQHSYDARYASLVKI 120

Query: 121 SESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQT 180
           +ESLDS    E DV+ VL+ +G+ ILE+DA++VLNNM+N +TALLA  +F+  LK S++ 
Sbjct: 121 AESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSREV 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFXXXXXXXXXXXXXXXXXXXXXX 240
           I YNVTLKVFRKCR+++ AEKLF+EM+ RGVKPDN+TF              XXXXXXXX
Sbjct: 181 ILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFXXXXXXXXXXXXXXXXXXXXXXX 480
            C PDSWTFSS+ITIYSC GKVSEAE MLN M+EAGF                       
Sbjct: 421 NCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEV 480

Query: 481 XXXXXXXXXXXXXXXDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD 540
                          DRFCGC+LNV+TQ+PK ELGKLIDC+ +ANPKLG VV+LLL EQ+
Sbjct: 481 VRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKLIDCIDKANPKLGNVVKLLLEEQN 540

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
            EG FR EASELF  +SADV KAYCNCLIDLCVNL+LL+KACEL DLGLTL+IY D+QS+
Sbjct: 541 GEGTFRKEASELFDSISADVXKAYCNCLIDLCVNLNLLEKACELFDLGLTLEIYIDIQSK 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
           SPTQWSL+LK LSLGAALTALH+W+ DL+K +E GEELP +LGINTGHGKHKYSDKGLAS
Sbjct: 601 SPTQWSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHKYSDKGLAS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVA 704
           VFESHLKELNAPFHEAP+KV WFLTTKVAA SWLESRS+PELVA
Sbjct: 661 VFESHLKELNAPFHEAPDKVXWFLTTKVAATSWLESRSAPELVA 700

The following BLAST results are available for this feature:

BLAST of CsGy1G015090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139516.1	5.3e-235	100.00	PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ...	[more]
XP_008464281.1	1.7e-220	95.74	PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ...	[more]
XP_023520706.1	1.0e-190	83.26	pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita ...	[more]
XP_022927501.1	2.3e-190	83.97	pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita ...	[more]
XP_022973114.1	9.8e-189	83.83	pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita ...	[more]

BLAST of CsGy1G015090 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16390.1	7.4e-122	65.53	pentatricopeptide (PPR) repeat-containing protein	[more]
AT5G46580.1	4.4e-34	40.71	pentatricopeptide (PPR) repeat-containing protein	[more]
AT2G31400.1	4.0e-11	29.19	genomes uncoupled 1	[more]

BLAST of CsGy1G015090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GWE0\|PP314_ARATH	1.3e-120	65.53	Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop...	[more]
sp\|Q10PZ4\|ATP4_ORYSJ	1.6e-78	53.02	Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza...	[more]
sp\|B4F8Z1\|ATP4_MAIZE	1.5e-76	52.31	Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4...	[more]
sp\|Q9LS25\|PP420_ARATH	8.0e-33	40.71	Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop...	[more]
sp\|Q9SIC9\|PP178_ARATH	7.3e-10	29.19	Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop...	[more]

BLAST of CsGy1G015090 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVP1\|A0A0A0LVP1_CUCSA	3.5e-235	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=4 SV=1	[more]
tr\|A0A1S3CL39\|A0A1S3CL39_CUCME	1.1e-220	95.74	pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis ...	[more]
tr\|A0A2I4DEQ4\|A0A2I4DEQ4_9ROSI	1.5e-153	74.29	pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like OS=Jug...	[more]
tr\|F6HCW3\|F6HCW3_VITVI	3.1e-151	72.30	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0194g00270 PE=4 SV=...	[more]
tr\|A5B4A6\|A5B4A6_VITVI	3.5e-150	72.02	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_001456 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR033443	PPR_long
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat
IPR002625	Smr_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031425	chloroplast RNA processing
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G015090.1	CsGy1G015090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002625	Smr domain	SMART	SM00463	SMR_2	coord: 603..693 e-value: 2.8E-14 score: 63.4
IPR002625	Smr domain	PROSITE	PS50828	SMR	coord: 606..690 score: 16.564
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 308..365 e-value: 1.5E-9 score: 37.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 179..222 e-value: 3.4E-11 score: 43.0 coord: 247..292 e-value: 6.3E-10 score: 39.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 286..318 e-value: 4.2E-5 score: 21.4 coord: 320..354 e-value: 1.4E-5 score: 23.0 coord: 182..213 e-value: 1.7E-5 score: 22.7 coord: 391..424 e-value: 6.2E-6 score: 24.1 coord: 215..248 e-value: 0.0014 score: 16.6 coord: 463..494 e-value: 5.8E-6 score: 24.2 coord: 250..283 e-value: 6.9E-8 score: 30.2 coord: 356..388 e-value: 7.2E-6 score: 23.9 coord: 427..459 e-value: 1.0E-6 score: 26.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 388..422 score: 10.687
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 459..493 score: 10.424
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 424..458 score: 11.422
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 283..317 score: 10.961
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 353..387 score: 10.49
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 178..212 score: 10.786
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 213..247 score: 8.605
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 318..352 score: 10.764
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 248..282 score: 11.016
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 152..312 e-value: 5.2E-38 score: 133.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 313..399 e-value: 1.8E-23 score: 84.8 coord: 400..513 e-value: 1.0E-26 score: 95.4
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 372..508 e-value: 9.9E-12 score: 44.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..99
None	No IPR available	PANTHER	PTHR24015:SF437	SUBFAMILY NOT NAMED	coord: 23..703
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 23..703
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 293..492

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G015090	Cla010975	Watermelon (97103) v1	cgybwmB043
CsGy1G015090	Csa1G173140	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G015090	MELO3C026075	Melon (DHL92) v3.5.1	cgybmeB016
CsGy1G015090	ClCG01G010980	Watermelon (Charleston Gray)	cgybwcgB021
CsGy1G015090	CSPI01G15330	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G015090	CmaCh18G006130	Cucurbita maxima (Rimu)	cgybcmaB089
CsGy1G015090	Lsi02G011550	Bottle gourd (USVL1VR-Ls)	cgyblsiB023
CsGy1G015090	MELO3C026075.2	Melon (DHL92) v3.6.1	cgybmedB015
CsGy1G015090	CsaV3_1G015490	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G015090	Cla97C01G010710	Watermelon (97103) v2	cgybwmbB009

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G015090	Cucumber (Gy14) v2	cgybcgybB036
CsGy1G015090	Cucurbita maxima (Rimu)	cgybcmaB068
CsGy1G015090	Cucurbita maxima (Rimu)	cgybcmaB071
CsGy1G015090	Cucurbita maxima (Rimu)	cgybcmaB095
CsGy1G015090	Cucurbita maxima (Rimu)	cgybcmaB128
CsGy1G015090	Cucurbita moschata (Rifu)	cgybcmoB084
CsGy1G015090	Cucurbita moschata (Rifu)	cgybcmoB118
CsGy1G015090	Cucurbita pepo (Zucchini)	cgybcpeB007
CsGy1G015090	Cucurbita pepo (Zucchini)	cgybcpeB024
CsGy1G015090	Cucumber (Chinese Long) v2	cgybcuB041
CsGy1G015090	Cucumber (Chinese Long) v2	cgybcuB045
CsGy1G015090	Bottle gourd (USVL1VR-Ls)	cgyblsiB014
CsGy1G015090	Bottle gourd (USVL1VR-Ls)	cgyblsiB016
CsGy1G015090	Bottle gourd (USVL1VR-Ls)	cgyblsiB029
CsGy1G015090	Bottle gourd (USVL1VR-Ls)	cgyblsiB038
CsGy1G015090	Melon (DHL92) v3.5.1	cgybmeB029
CsGy1G015090	Melon (DHL92) v3.6.1	cgybmedB022
CsGy1G015090	Watermelon (Charleston Gray)	cgybwcgB018
CsGy1G015090	Watermelon (Charleston Gray)	cgybwcgB019
CsGy1G015090	Watermelon (Charleston Gray)	cgybwcgB026
CsGy1G015090	Watermelon (97103) v1	cgybwmB048
CsGy1G015090	Watermelon (97103) v1	cgybwmB059
CsGy1G015090	Watermelon (97103) v1	cgybwmB061
CsGy1G015090	Wild cucumber (PI 183967)	cgybcpiB038
CsGy1G015090	Wild cucumber (PI 183967)	cgybcpiB042
CsGy1G015090	Silver-seed gourd	carcgybB0049
CsGy1G015090	Silver-seed gourd	carcgybB0051
CsGy1G015090	Silver-seed gourd	carcgybB0408
CsGy1G015090	Cucumber (Chinese Long) v3	cgybcucB046
CsGy1G015090	Watermelon (97103) v2	cgybwmbB006
CsGy1G015090	Watermelon (97103) v2	cgybwmbB008
CsGy1G015090	Wax gourd	cgybwgoB032
CsGy1G015090	Wax gourd	cgybwgoB042