Cla009282 (gene) Watermelon (97103) v1

Overview
NameCla009282
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionmRNA clone RTFL01-07-K18 (AHRD V1 *-*- E4MW57_THEHA)
LocationChr6 : 5318944 .. 5319540 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTTGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCCCTGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCGCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAAAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAGATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA

mRNA sequence

ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTTGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCCCTGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCGCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAAAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAGATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA

Coding sequence (CDS)

ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTTGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCCCTGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCGCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAAAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAGATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA

Protein sequence

MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGGGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFISVC
Homology
[Close]
BLAST of Cla009282 vs. TrEMBL
Match: A0A0A0KG90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G318150 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 3.8e-101
Identity = 186/200 (93.00%), Postives = 189/200 (94.50%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPSS   AL+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYG--G 120
           FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGP G  G
Sbjct: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPIGGDG 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GG GGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEAIGNSERGKL+MR ISVC
Sbjct: 181 AEAIGNSERGKLAMRLISVC 200

[Close]
BLAST of Cla009282 vs. TrEMBL
Match: D7SYA2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01850 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.5e-49
Identity = 114/200 (57.00%), Postives = 141/200 (70.50%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNR-LDFVSNYCISATDSITDQIPPSSAPGALQLSAA 60
           M+  L+A T+S     G+ FAK L R  + VSN  +S  DS       SS  G LQ+SA 
Sbjct: 1   MEICLIADTVSQ----GLSFAKILLRGHNVVSNNHLSVFDSSEQ----SSTAGVLQISAM 60

Query: 61  LFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGF-GGGDFDGPYGG 120
           +FPV  +APPPV+S S ++A RT LRRKRRT+RR  + DSE  E+ GF G G  DGP+ G
Sbjct: 61  IFPVDALAPPPVRSNSCKTARRTSLRRKRRTRRRSLTGDSENGEDFGFLGDGGDDGPF-G 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           G GGGGRGWNFDRFGG++WDE  S SSSS+PA+ FVYEV+CWIALSNCVHFAFK+VVR  
Sbjct: 121 GFGGGGRGWNFDRFGGHNWDE--SPSSSSDPAFDFVYEVICWIALSNCVHFAFKRVVRIF 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           A+ IG++ R K+  RF S+C
Sbjct: 181 ADDIGDASREKVPFRFASMC 189

[Close]
BLAST of Cla009282 vs. TrEMBL
Match: A5AMS3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012018 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.7e-46
Identity = 110/191 (57.59%), Postives = 135/191 (70.68%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNR-LDFVSNYCISATDSITDQIPPSSAPGALQLSAA 60
           M+  L+A T+S     G+ FAK L R  + VSN  +S  DS       SS  G LQ+SA 
Sbjct: 38  MEICLIADTVSQ----GLSFAKILLRGHNVVSNNHLSVFDSSEQ----SSTAGVLQISAM 97

Query: 61  LFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGF-GGGDFDGPYGG 120
           +FPV  +APPPV+S S ++A RT LRRKRRT+RR  + DSE  E+ GF G G  DGP+ G
Sbjct: 98  IFPVDALAPPPVRSNSCKTARRTSLRRKRRTRRRSLTGDSENGEDFGFLGDGGDDGPF-G 157

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           G GGGGRGWNFDRFGG++WDE  S SSSS+PA+ FVYEV+CWIALSNCVHFAFK+VVR  
Sbjct: 158 GFGGGGRGWNFDRFGGHNWDE--SPSSSSDPAFDFVYEVICWIALSNCVHFAFKRVVRIF 217

Query: 181 AEAIGNSERGK 190
           A+ IG++ R K
Sbjct: 218 ADDIGDASREK 217

[Close]
BLAST of Cla009282 vs. TrEMBL
Match: A0A087H7P0_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G074900 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.5e-38
Identity = 104/214 (48.60%), Postives = 131/214 (61.21%), Query Frame = 1 

Query: 1   MDSSLVAGTLSM-VANNGIGFAK-FLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSA 60
           M+ +L+A T+S+  A  GI F K  LNR D V+    +   SI            +Q SA
Sbjct: 1   MEFTLIADTVSVCTAKQGIAFGKSILNRWDLVNQISFADDQSI------------VQASA 60

Query: 61  ALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDF------ 120
            +FPV  IAPPP++S SY++  R  +R+KRRTKR  +  DSE       GGGDF      
Sbjct: 61  IIFPVDAIAPPPIRSSSYKTIRR--IRKKRRTKRVSFGGDSED------GGGDFGRFFLE 120

Query: 121 ----DGPYG--GGGGGGGRGWNFDR-FGGNDWDESSSSSSS-SNPAYYFVYEVVCWIALS 180
               DGP+G  GGGGGGG+GWN    FGG +WDESSSSSSS S+PA  FVYEV+CWIALS
Sbjct: 121 GDGNDGPFGFGGGGGGGGKGWNSGGGFGGGNWDESSSSSSSWSDPAMGFVYEVICWIALS 180

Query: 181 NCVHFAFKKVVRFAAEAIGNSERGKLSMRFISVC 199
           NCVHFAFK++VR     + + ER KL++    VC
Sbjct: 181 NCVHFAFKRIVRI----VTDGEREKLNITLSPVC 190

[Close]
BLAST of Cla009282 vs. TrEMBL
Match: M4ELD7_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-34
Identity = 100/208 (48.08%), Postives = 130/208 (62.50%), Query Frame = 1 

Query: 1   MDSSLVAGTLSM-VANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAA 60
           M+ SL+A T++   A   + F   L  L+  ++   +A DS+ DQ P     G +Q SAA
Sbjct: 1   MELSLIAETVAFSTAKQCVAFGSSLLLLNRANHVSFTA-DSLVDQSPA----GIVQASAA 60

Query: 61  -LFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE-----GRE--NDGFGGGD 120
            +FPV  IAP PV+S SY++  R  +R++RR KR  Y  DSE     GR     GFGG D
Sbjct: 61  VIFPVDAIAPSPVRSSSYKTIRR--IRKRRRAKRVSYGGDSEDGGDFGRFLLEGGFGGSD 120

Query: 121 FDGPYGGGGGGGGRGWNF-DRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFA 180
             GP+G GGGGGG+GWN+    GG +WDE SSSSS S+PA  FVYEV+CWIALSNCVHFA
Sbjct: 121 --GPFGFGGGGGGKGWNYGGGGGGGNWDE-SSSSSWSDPAMEFVYEVICWIALSNCVHFA 180

Query: 181 FKKVVRFAAEAIGNSERGKLSMRFISVC 199
           FK++VR     + + ER KL++    VC
Sbjct: 181 FKRIVRI----VTDGEREKLNLTLSPVC 194

[Close]
BLAST of Cla009282 vs. NCBI nr
Match: gi|778714725|ref|XP_011657286.1| (PREDICTED: uncharacterized protein LOC105435841 [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 5.5e-101
Identity = 186/200 (93.00%), Postives = 189/200 (94.50%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPSS   AL+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYG--G 120
           FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGP G  G
Sbjct: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPIGGDG 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GG GGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEAIGNSERGKL+MR ISVC
Sbjct: 181 AEAIGNSERGKLAMRLISVC 200

[Close]
BLAST of Cla009282 vs. NCBI nr
Match: gi|659117067|ref|XP_008458406.1| (PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo])

HSP 1 Score: 372.1 bits (954), Expect = 6.1e-100
Identity = 185/200 (92.50%), Postives = 188/200 (94.00%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCISATDSITDQIP SS   +L+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYG--G 120
           FPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGPYG  G
Sbjct: 61  FPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPYGGDG 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GGGGGGRGWNFDRFGGNDWDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGGGGGRGWNFDRFGGNDWDESSFSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEA GNSERGKLSMR ISVC
Sbjct: 181 AEAFGNSERGKLSMRLISVC 200

[Close]
BLAST of Cla009282 vs. NCBI nr
Match: gi|645233243|ref|XP_008223251.1| (PREDICTED: uncharacterized protein LOC103323068 [Prunus mume])

HSP 1 Score: 212.2 bits (539), Expect = 8.1e-52
Identity = 117/206 (56.80%), Postives = 148/206 (71.84%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVAN-NGIGFAKFLNRL-DFVSNYCISATDSITDQIPPSSAPGALQLSA 60
           MD SL+  T+++     G+GFAKFL R  D  SN  IS TDS  DQ  PS+  G  Q+SA
Sbjct: 91  MDVSLLYDTVTVATTAQGLGFAKFLIRHHDLTSNNQISITDSHPDQSSPSN--GVPQISA 150

Query: 61  ALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDS---EGRENDGFGGGD---F 120
            +FPV  +APP V+  S+++A+RT LR+KRRT+RR  S D     G E+ GF GGD   F
Sbjct: 151 VIFPVDAVAPPRVRPNSHKTATRTLLRKKRRTRRRSSSGDDLNDGGEEDGGFFGGDGPFF 210

Query: 121 DGPYGGGGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFK 180
           +G +GG GGGGG GWNFDRFGG++WDESSSSS S +PA+ FVYEV+CWIALSNCVHFAFK
Sbjct: 211 NGGWGGSGGGGG-GWNFDRFGGHNWDESSSSSPS-DPAFDFVYEVMCWIALSNCVHFAFK 270

Query: 181 KVVRFAAEAIGNSERGKLSMRFISVC 199
           +V+R  A+ +G++ER K+ MR  SVC
Sbjct: 271 RVIRIVADGLGDAERAKVPMRLTSVC 292

[Close]
BLAST of Cla009282 vs. NCBI nr
Match: gi|596181369|ref|XP_007223284.1| (hypothetical protein PRUPE_ppa009469mg [Prunus persica])

HSP 1 Score: 212.2 bits (539), Expect = 8.1e-52
Identity = 117/206 (56.80%), Postives = 148/206 (71.84%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVAN-NGIGFAKFLNRL-DFVSNYCISATDSITDQIPPSSAPGALQLSA 60
           MD SL+  T+++     G+GFAKFL R  D  SN  IS TDS  DQ  PS+  G  Q+SA
Sbjct: 90  MDVSLLYDTVTVATTAQGLGFAKFLIRHHDLTSNNQISITDSHPDQSSPSN--GVPQISA 149

Query: 61  ALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDS---EGRENDGFGGGD---F 120
            +FPV  +APP V+  S+++A+RT LR+KRRT+RR  S D     G E+ GF GGD   F
Sbjct: 150 VIFPVDAVAPPRVRPNSHKTATRTLLRKKRRTRRRSSSGDDLNDGGEEDGGFFGGDGPFF 209

Query: 121 DGPYGGGGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFK 180
           +G +GG GGGGG GWNFDRFGG++WDESSSSS S +PA+ FVYEV+CWIALSNCVHFAFK
Sbjct: 210 NGGWGGSGGGGG-GWNFDRFGGHNWDESSSSSPS-DPAFDFVYEVMCWIALSNCVHFAFK 269

Query: 181 KVVRFAAEAIGNSERGKLSMRFISVC 199
           +V+R  A+ +G++ER K+ MR  SVC
Sbjct: 270 RVIRIVADGLGDAERAKVPMRLTSVC 291

[Close]
BLAST of Cla009282 vs. NCBI nr
Match: gi|657996482|ref|XP_008390612.1| (PREDICTED: uncharacterized protein LOC103452853 [Malus domestica])

HSP 1 Score: 206.5 bits (524), Expect = 4.4e-50
Identity = 113/206 (54.85%), Postives = 142/206 (68.93%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVAN-NGIGFAKFL-NRLDFVSNYCISATDSITDQIPPSSAPGALQLSA 60
           MD SL+  T+++     G+GFAKFL  R D  SN  IS TD+  DQ  PS + G  Q+SA
Sbjct: 1   MDISLLYDTVTVATTAQGLGFAKFLIRRHDLTSNNQISITDTHPDQ--PSPSNGVPQISA 60

Query: 61  ALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE---GRENDGFGGGD---F 120
            +F    +APP  +  S R+A+RT LR+KRRT+RR  S D     G+E+ GF GGD   F
Sbjct: 61  VIFSFDAVAPPRARPNSTRTATRTLLRKKRRTRRRPSSGDDSNDGGQEDGGFFGGDGPFF 120

Query: 121 DGPYGGGGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFK 180
           +G +GG GGGGG GWNFDRFGGN WDE SSSS S +PA+ FVYEV+CWIALSNCVHFAFK
Sbjct: 121 NGGWGGSGGGGGGGWNFDRFGGNSWDEPSSSSPS-DPAFDFVYEVMCWIALSNCVHFAFK 180

Query: 181 KVVRFAAEAIGNSERGKLSMRFISVC 199
           +V+R  A+ +G++ R K+ MR  SVC
Sbjct: 181 RVIRILADGLGDAHREKVPMRLTSVC 203

The following BLAST results are available for this feature:
BLAST of Cla009282 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KG90_CUCSA3.8e-10193.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G318150 PE=4 SV=1[more]
D7SYA2_VITVI4.5e-4957.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01850 PE=4 SV=... [more]
A5AMS3_VITVI2.7e-4657.59Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012018 PE=4 SV=1[more]
A0A087H7P0_ARAAL3.5e-3848.60Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G074900 PE=4 SV=1[more]
M4ELD7_BRARP1.1e-3448.08Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
BLAST of Cla009282 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778714725|ref|XP_011657286.1|5.5e-10193.00PREDICTED: uncharacterized protein LOC105435841 [Cucumis sativus][more]
gi|659117067|ref|XP_008458406.1|6.1e-10092.50PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo][more]
gi|645233243|ref|XP_008223251.1|8.1e-5256.80PREDICTED: uncharacterized protein LOC103323068 [Prunus mume][more]
gi|596181369|ref|XP_007223284.1|8.1e-5256.80hypothetical protein PRUPE_ppa009469mg [Prunus persica][more]
gi|657996482|ref|XP_008390612.1|4.4e-5054.85PREDICTED: uncharacterized protein LOC103452853 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004386 helicase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU42095watermelon EST collection version 2.0transcribed_cluster
WMU63703watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla009282Cla009282.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU42095WMU42095transcribed_cluster
WMU63703WMU63703transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36751FAMILY NOT NAMEDcoord: 2..198
score: 1.4
NoneNo IPR availablePANTHERPTHR36751:SF1F3E22.8 PROTEINcoord: 2..198
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla009282Cla97C06G114410Watermelon (97103) v2wmwmbB406
Cla009282Csa6G318150Cucumber (Chinese Long) v2cuwmB538
Cla009282MELO3C021305Melon (DHL92) v3.5.1mewmB141
Cla009282ClCG06G004920Watermelon (Charleston Gray)wcgwmB344
Cla009282CSPI06G17370Wild cucumber (PI 183967)cpiwmB557
Cla009282Cucsa.069290Cucumber (Gy14) v1cgywmB069
Cla009282CmaCh17G003450Cucurbita maxima (Rimu)cmawmB358
Cla009282CmaCh08G012440Cucurbita maxima (Rimu)cmawmB878
Cla009282CmoCh08G012160Cucurbita moschata (Rifu)cmowmB867
Cla009282CmoCh17G003320Cucurbita moschata (Rifu)cmowmB353
Cla009282Lsi09G014550Bottle gourd (USVL1VR-Ls)lsiwmB040
Cla009282Cp4.1LG12g02930Cucurbita pepo (Zucchini)cpewmB161
Cla009282Cp4.1LG17g00370Cucurbita pepo (Zucchini)cpewmB340
Cla009282MELO3C021305.2Melon (DHL92) v3.6.1medwmB139
Cla009282Carg05520Silver-seed gourdcarwmB0073
Cla009282Carg18859Silver-seed gourdcarwmB0701
Cla009282CsaV3_6G022730Cucumber (Chinese Long) v3cucwmB563
Cla009282Bhi12G001799Wax gourdwgowmB095
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla009282Silver-seed gourdcarwmB0270
Cla009282Cucumber (Chinese Long) v3cucwmB190
Cla009282Cucumber (Chinese Long) v3cucwmB288
Cla009282Cucumber (Chinese Long) v3cucwmB376
Cla009282Watermelon (97103) v2wmwmbB389
Cla009282Watermelon (97103) v2wmwmbB394
Cla009282Watermelon (97103) v2wmwmbB402
Cla009282Wax gourdwgowmB055
Cla009282Wax gourdwgowmB238
Cla009282Watermelon (97103) v1wmwmB056
Cla009282Watermelon (97103) v1wmwmB138
Cla009282Watermelon (97103) v1wmwmB161
Cla009282Cucumber (Gy14) v1cgywmB108
Cla009282Cucumber (Gy14) v1cgywmB483
Cla009282Cucurbita maxima (Rimu)cmawmB250
Cla009282Cucurbita maxima (Rimu)cmawmB811
Cla009282Cucurbita moschata (Rifu)cmowmB239
Cla009282Melon (DHL92) v3.5.1mewmB486
Cla009282Melon (DHL92) v3.5.1mewmB437
Cla009282Watermelon (Charleston Gray)wcgwmB081
Cla009282Watermelon (Charleston Gray)wcgwmB218
Cla009282Watermelon (Charleston Gray)wcgwmB311
Cla009282Cucumber (Chinese Long) v2cuwmB178
Cla009282Cucumber (Chinese Long) v2cuwmB279
Cla009282Cucurbita pepo (Zucchini)cpewmB126
Cla009282Cucurbita pepo (Zucchini)cpewmB623
Cla009282Cucurbita pepo (Zucchini)cpewmB853
Cla009282Bottle gourd (USVL1VR-Ls)lsiwmB125
Cla009282Bottle gourd (USVL1VR-Ls)lsiwmB280
Cla009282Bottle gourd (USVL1VR-Ls)lsiwmB384
Cla009282Cucumber (Gy14) v2cgybwmB262
Cla009282Cucumber (Gy14) v2cgybwmB502
Cla009282Melon (DHL92) v3.6.1medwmB423
Cla009282Melon (DHL92) v3.6.1medwmB474
Cla009282Melon (DHL92) v3.6.1medwmB534